Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192890 | XP_003593734.1 | 97.611 | 586 | 10 | 1 | 1 | 586 | 1 | 582 | 0.0 | 1180 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192890 | sp|P51850|PDC1_PEA | 94.266 | 593 | 27 | 2 | 1 | 586 | 1 | 593 | 0.0 | 1132 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192890 | G7IKA3 | 97.611 | 586 | 10 | 1 | 1 | 586 | 1 | 582 | 0.0 | 1180 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025060 | Msa0192890 | -0.897496 | 1.328648e-76 | -8.615850e-47 |
| Msa0025090 | Msa0192890 | -0.855891 | 4.653485e-62 | -8.615850e-47 |
| Msa0027610 | Msa0192890 | -0.802299 | 5.992678e-49 | -8.615850e-47 |
| Msa0034800 | Msa0192890 | -0.813559 | 2.408003e-51 | -8.615850e-47 |
| Msa0036560 | Msa0192890 | -0.854586 | 1.115579e-61 | -8.615850e-47 |
| Msa0046000 | Msa0192890 | -0.803599 | 3.228040e-49 | -8.615850e-47 |
| Msa0049670 | Msa0192890 | -0.814697 | 1.349883e-51 | -8.615850e-47 |
| Msa0050850 | Msa0192890 | -0.803572 | 3.269995e-49 | -8.615850e-47 |
| Msa0064960 | Msa0192890 | 0.821904 | 3.150195e-53 | -8.615850e-47 |
| Msa0071640 | Msa0192890 | 0.825142 | 5.507427e-54 | -8.615850e-47 |
| Msa0072590 | Msa0192890 | -0.842639 | 2.287610e-58 | -8.615850e-47 |
| Msa0075370 | Msa0192890 | -0.803620 | 3.195137e-49 | -8.615850e-47 |
| Msa0079320 | Msa0192890 | -0.831796 | 1.362578e-55 | -8.615850e-47 |
| Msa0081700 | Msa0192890 | -0.811654 | 6.283219e-51 | -8.615850e-47 |
| Msa0083200 | Msa0192890 | -0.826522 | 2.589980e-54 | -8.615850e-47 |
| Msa0099090 | Msa0192890 | -0.812220 | 4.730580e-51 | -8.615850e-47 |
| Msa0106810 | Msa0192890 | -0.844120 | 9.205925e-59 | -8.615850e-47 |
| Msa0110240 | Msa0192890 | 0.829300 | 5.561931e-55 | -8.615850e-47 |
| Msa0118250 | Msa0192890 | -0.802329 | 5.907076e-49 | -8.615850e-47 |
| Msa0121080 | Msa0192890 | -0.802483 | 5.491837e-49 | -8.615850e-47 |
| Msa0139280 | Msa0192890 | -0.860950 | 1.444861e-63 | -8.615850e-47 |
| Msa0146570 | Msa0192890 | -0.812711 | 3.695958e-51 | -8.615850e-47 |
| Msa0153290 | Msa0192890 | -0.849237 | 3.679164e-60 | -8.615850e-47 |
| Msa0167800 | Msa0192890 | -0.809144 | 2.187598e-50 | -8.615850e-47 |
| Msa0170640 | Msa0192890 | -0.801294 | 9.635369e-49 | -8.615850e-47 |
| Msa0172110 | Msa0192890 | -0.847082 | 1.448269e-59 | -8.615850e-47 |
| Msa0172310 | Msa0192890 | -0.803845 | 2.870160e-49 | -8.615850e-47 |
| Msa0173260 | Msa0192890 | 0.833046 | 6.676049e-56 | -8.615850e-47 |
| Msa0174800 | Msa0192890 | -0.819765 | 9.778031e-53 | -8.615850e-47 |
| Msa0176610 | Msa0192890 | -0.858651 | 7.116032e-63 | -8.615850e-47 |
| Msa0183960 | Msa0192890 | -0.802659 | 5.050178e-49 | -8.615850e-47 |
| Msa0186380 | Msa0192890 | -0.808945 | 2.412822e-50 | -8.615850e-47 |
| Msa0192890 | Msa0196530 | 0.819934 | 8.946899e-53 | -8.615850e-47 |
| Msa0192890 | Msa0198140 | -0.812047 | 5.160400e-51 | -8.615850e-47 |
| Msa0192890 | Msa0198220 | -0.804097 | 2.544274e-49 | -8.615850e-47 |
| Msa0192890 | Msa0218480 | -0.806430 | 8.256628e-50 | -8.615850e-47 |
| Msa0192890 | Msa0218590 | -0.806535 | 7.847892e-50 | -8.615850e-47 |
| Msa0192890 | Msa0225050 | -0.805003 | 1.646302e-49 | -8.615850e-47 |
| Msa0192890 | Msa0226580 | -0.830295 | 3.183130e-55 | -8.615850e-47 |
| Msa0192890 | Msa0228360 | -0.824279 | 8.795748e-54 | -8.615850e-47 |
| Msa0192890 | Msa0232170 | -0.813724 | 2.214585e-51 | -8.615850e-47 |
| Msa0192890 | Msa0232660 | -0.808317 | 3.286838e-50 | -8.615850e-47 |
| Msa0192890 | Msa0235020 | 0.959238 | 3.195553e-117 | -8.615850e-47 |
| Msa0192890 | Msa0238420 | 0.840390 | 8.948645e-58 | -8.615850e-47 |
| Msa0192890 | Msa0242730 | 0.813109 | 3.022542e-51 | -8.615850e-47 |
| Msa0192890 | Msa0258280 | -0.845762 | 3.317680e-59 | -8.615850e-47 |
| Msa0192890 | Msa0261200 | -0.820640 | 6.165161e-53 | -8.615850e-47 |
| Msa0192890 | Msa0266380 | -0.802830 | 4.657298e-49 | -8.615850e-47 |
| Msa0192890 | Msa0273420 | 0.964512 | 2.022083e-123 | -8.615850e-47 |
| Msa0192890 | Msa0278340 | -0.801730 | 7.844184e-49 | -8.615850e-47 |
| Msa0192890 | Msa0281010 | 0.815479 | 9.050146e-52 | -8.615850e-47 |
| Msa0192890 | Msa0283230 | 0.809379 | 1.948454e-50 | -8.615850e-47 |
| Msa0192890 | Msa0294200 | 0.800659 | 1.299356e-48 | -8.615850e-47 |
| Msa0192890 | Msa0297320 | -0.812476 | 4.159900e-51 | -8.615850e-47 |
| Msa0192890 | Msa0304350 | -0.804911 | 1.721116e-49 | -8.615850e-47 |
| Msa0192890 | Msa0305910 | -0.804591 | 2.006939e-49 | -8.615850e-47 |
| Msa0192890 | Msa0311900 | 0.802447 | 5.586555e-49 | -8.615850e-47 |
| Msa0192890 | Msa0313680 | 0.984253 | 5.018503e-160 | -8.615850e-47 |
| Msa0192890 | Msa0315820 | -0.804124 | 2.510913e-49 | -8.615850e-47 |
| Msa0192890 | Msa0316140 | 0.811730 | 6.048720e-51 | -8.615850e-47 |
| Msa0192890 | Msa0320180 | 0.819758 | 9.816979e-53 | -8.615850e-47 |
| Msa0192890 | Msa0340830 | -0.805497 | 1.297340e-49 | -8.615850e-47 |
| Msa0192890 | Msa0340870 | -0.806421 | 8.292847e-50 | -8.615850e-47 |
| Msa0192890 | Msa0341860 | -0.807630 | 4.601316e-50 | -8.615850e-47 |
| Msa0192890 | Msa0369660 | 0.808058 | 3.732880e-50 | -8.615850e-47 |
| Msa0192890 | Msa0370350 | -0.823570 | 1.289893e-53 | -8.615850e-47 |
| Msa0192890 | Msa0372250 | -0.802044 | 6.761400e-49 | -8.615850e-47 |
| Msa0192890 | Msa0375500 | 0.830219 | 3.322005e-55 | -8.615850e-47 |
| Msa0192890 | Msa0378620 | -0.820446 | 6.831833e-53 | -8.615850e-47 |
| Msa0192890 | Msa0384130 | -0.812217 | 4.736571e-51 | -8.615850e-47 |
| Msa0192890 | Msa0384220 | 0.824627 | 7.286778e-54 | -8.615850e-47 |
| Msa0192890 | Msa0384330 | -0.808605 | 2.853418e-50 | -8.615850e-47 |
| Msa0192890 | Msa0385870 | -0.803347 | 3.640418e-49 | -8.615850e-47 |
| Msa0192890 | Msa0387180 | 0.815697 | 8.093479e-52 | -8.615850e-47 |
| Msa0192890 | Msa0389570 | -0.800992 | 1.110970e-48 | -8.615850e-47 |
| Msa0192890 | Msa0412820 | 0.809257 | 2.068877e-50 | -8.615850e-47 |
| Msa0192890 | Msa0424300 | 0.807046 | 6.119363e-50 | -8.615850e-47 |
| Msa0192890 | Msa0432260 | -0.812059 | 5.129495e-51 | -8.615850e-47 |
| Msa0192890 | Msa0434140 | 0.812254 | 4.650434e-51 | -8.615850e-47 |
| Msa0192890 | Msa0434890 | 0.805347 | 1.394784e-49 | -8.615850e-47 |
| Msa0192890 | Msa0452120 | -0.809114 | 2.220676e-50 | -8.615850e-47 |
| Msa0192890 | Msa0457530 | 0.809545 | 1.794310e-50 | -8.615850e-47 |
| Msa0192890 | Msa0458130 | -0.811331 | 7.386243e-51 | -8.615850e-47 |
| Msa0192890 | Msa0463890 | 0.801809 | 7.555695e-49 | -8.615850e-47 |
| Msa0192890 | Msa0471210 | 0.839371 | 1.648927e-57 | -8.615850e-47 |
| Msa0192890 | Msa0476730 | -0.809852 | 1.541512e-50 | -8.615850e-47 |
| Msa0192890 | Msa0477660 | 0.808774 | 2.625199e-50 | -8.615850e-47 |
| Msa0192890 | Msa0478660 | -0.835490 | 1.628163e-56 | -8.615850e-47 |
| Msa0192890 | Msa0478750 | -0.832511 | 9.066591e-56 | -8.615850e-47 |
| Msa0192890 | Msa0482360 | 0.824922 | 6.208675e-54 | -8.615850e-47 |
| Msa0192890 | Msa0483160 | -0.808241 | 3.412357e-50 | -8.615850e-47 |
| Msa0192890 | Msa0486850 | -0.808893 | 2.475471e-50 | -8.615850e-47 |
| Msa0192890 | Msa0504430 | 0.813735 | 2.201798e-51 | -8.615850e-47 |
| Msa0192890 | Msa0512430 | -0.830578 | 2.713249e-55 | -8.615850e-47 |
| Msa0192890 | Msa0515930 | 0.811231 | 7.762704e-51 | -8.615850e-47 |
| Msa0192890 | Msa0521100 | -0.821899 | 3.159007e-53 | -8.615850e-47 |
| Msa0192890 | Msa0521720 | 0.808496 | 3.010358e-50 | -8.615850e-47 |
| Msa0192890 | Msa0522730 | -0.820951 | 5.229179e-53 | -8.615850e-47 |
| Msa0192890 | Msa0522830 | -0.824522 | 7.710784e-54 | -8.615850e-47 |
| Msa0192890 | Msa0523400 | -0.807830 | 4.173891e-50 | -8.615850e-47 |
| Msa0192890 | Msa0532310 | 0.811701 | 6.137130e-51 | -8.615850e-47 |
| Msa0192890 | Msa0540120 | -0.818117 | 2.317415e-52 | -8.615850e-47 |
| Msa0192890 | Msa0540160 | -0.801195 | 1.009812e-48 | -8.615850e-47 |
| Msa0192890 | Msa0549550 | -0.807110 | 5.932221e-50 | -8.615850e-47 |
| Msa0192890 | Msa0559440 | -0.824621 | 7.310832e-54 | -8.615850e-47 |
| Msa0192890 | Msa0559640 | -0.804059 | 2.590928e-49 | -8.615850e-47 |
| Msa0192890 | Msa0577960 | -0.812279 | 4.591933e-51 | -8.615850e-47 |
| Msa0192890 | Msa0592020 | 0.815158 | 1.066736e-51 | -8.615850e-47 |
| Msa0192890 | Msa0604890 | -0.807179 | 5.737016e-50 | -8.615850e-47 |
| Msa0192890 | Msa0605020 | 0.849240 | 3.671448e-60 | -8.615850e-47 |
| Msa0192890 | Msa0622070 | 0.810018 | 1.419583e-50 | -8.615850e-47 |
| Msa0192890 | Msa0625550 | -0.815068 | 1.117357e-51 | -8.615850e-47 |
| Msa0192890 | Msa0632040 | -0.812673 | 3.765686e-51 | -8.615850e-47 |
| Msa0192890 | Msa0641970 | -0.803555 | 3.296716e-49 | -8.615850e-47 |
| Msa0192890 | Msa0646180 | -0.825851 | 3.742054e-54 | -8.615850e-47 |
| Msa0192890 | Msa0646670 | 0.850307 | 1.848121e-60 | -8.615850e-47 |
| Msa0192890 | Msa0651720 | -0.813083 | 3.062495e-51 | -8.615850e-47 |
| Msa0192890 | Msa0654500 | -0.810054 | 1.394971e-50 | -8.615850e-47 |
| Msa0192890 | Msa0665010 | -0.808642 | 2.801707e-50 | -8.615850e-47 |
| Msa0192890 | Msa0667240 | 0.807716 | 4.411960e-50 | -8.615850e-47 |
| Msa0192890 | Msa0674680 | -0.819360 | 1.210016e-52 | -8.615850e-47 |
| Msa0192890 | Msa0707870 | -0.813280 | 2.772204e-51 | -8.615850e-47 |
| Msa0192890 | Msa0708840 | -0.805839 | 1.099496e-49 | -8.615850e-47 |
| Msa0192890 | Msa0709820 | 0.831121 | 1.996880e-55 | -8.615850e-47 |
| Msa0192890 | Msa0721260 | 0.807926 | 3.980789e-50 | -8.615850e-47 |
| Msa0192890 | Msa0722660 | -0.812702 | 3.712581e-51 | -8.615850e-47 |
| Msa0192890 | Msa0742690 | -0.838237 | 3.240840e-57 | -8.615850e-47 |
| Msa0192890 | Msa0753410 | 0.836079 | 1.154446e-56 | -8.615850e-47 |
| Msa0192890 | Msa0762390 | -0.825520 | 4.483342e-54 | -8.615850e-47 |
| Msa0192890 | Msa0762470 | -0.817196 | 3.738647e-52 | -8.615850e-47 |
| Msa0192890 | Msa0779830 | -0.850154 | 2.040406e-60 | -8.615850e-47 |
| Msa0192890 | Msa0795330 | 0.827977 | 1.161057e-54 | -8.615850e-47 |
| Msa0192890 | Msa0807170 | -0.818463 | 1.934596e-52 | -8.615850e-47 |
| Msa0192890 | Msa0814350 | 0.823153 | 1.614361e-53 | -8.615850e-47 |
| Msa0192890 | Msa0826360 | 0.807184 | 5.722486e-50 | -8.615850e-47 |
| Msa0192890 | Msa0827560 | -0.853656 | 2.068509e-61 | -8.615850e-47 |
| Msa0192890 | Msa0829770 | -0.809345 | 1.981136e-50 | -8.615850e-47 |
| Msa0192890 | Msa0854860 | 0.810964 | 8.872789e-51 | -8.615850e-47 |
| Msa0192890 | Msa0862750 | -0.853372 | 2.496921e-61 | -8.615850e-47 |
| Msa0192890 | Msa0883880 | -0.805294 | 1.431095e-49 | -8.615850e-47 |
| Msa0192890 | Msa0904940 | 0.822137 | 2.782691e-53 | -8.615850e-47 |
| Msa0192890 | Msa0906100 | -0.810852 | 9.378162e-51 | -8.615850e-47 |
| Msa0192890 | Msa0911440 | -0.801348 | 9.395878e-49 | -8.615850e-47 |
| Msa0192890 | Msa0911490 | -0.800163 | 1.639536e-48 | -8.615850e-47 |
| Msa0192890 | Msa0917630 | -0.800917 | 1.150958e-48 | -8.615850e-47 |
| Msa0192890 | Msa0933050 | -0.826553 | 2.546509e-54 | -8.615850e-47 |
| Msa0192890 | Msa0936950 | 0.806424 | 8.280646e-50 | -8.615850e-47 |
| Msa0192890 | Msa0946570 | -0.821374 | 4.178210e-53 | -8.615850e-47 |
| Msa0192890 | Msa0947420 | 0.825348 | 4.923924e-54 | -8.615850e-47 |
| Msa0192890 | Msa0970940 | -0.816228 | 6.161169e-52 | -8.615850e-47 |
| Msa0192890 | Msa1029570 | -0.805114 | 1.560535e-49 | -8.615850e-47 |
| Msa0192890 | Msa1034870 | 0.844414 | 7.671999e-59 | -8.615850e-47 |
| Msa0192890 | Msa1039650 | 0.812726 | 3.667332e-51 | -8.615850e-47 |
| Msa0192890 | Msa1049810 | 0.811961 | 5.387103e-51 | -8.615850e-47 |
| Msa0192890 | Msa1067040 | 0.838227 | 3.260266e-57 | -8.615850e-47 |
| Msa0192890 | Msa1074910 | 0.822454 | 2.348168e-53 | -8.615850e-47 |
| Msa0192890 | Msa1081650 | -0.801483 | 8.813075e-49 | -8.615850e-47 |
| Msa0192890 | Msa1085580 | -0.800226 | 1.591617e-48 | -8.615850e-47 |
| Msa0192890 | Msa1108630 | -0.818798 | 1.623954e-52 | -8.615850e-47 |
| Msa0192890 | Msa1108960 | 0.851057 | 1.137296e-60 | -8.615850e-47 |
| Msa0192890 | Msa1112040 | 0.825333 | 4.963020e-54 | -8.615850e-47 |
| Msa0192890 | Msa1112230 | -0.802678 | 5.006982e-49 | -8.615850e-47 |
| Msa0192890 | Msa1129130 | -0.822672 | 2.090245e-53 | -8.615850e-47 |
| Msa0192890 | Msa1129470 | -0.821569 | 3.765062e-53 | -8.615850e-47 |
| Msa0192890 | Msa1138730 | -0.804003 | 2.661077e-49 | -8.615850e-47 |
| Msa0192890 | Msa1152350 | -0.825696 | 4.072618e-54 | -8.615850e-47 |
| Msa0192890 | Msa1152860 | 0.852599 | 4.152093e-61 | -8.615850e-47 |
| Msa0192890 | Msa1174450 | 0.807696 | 4.456239e-50 | -8.615850e-47 |
| Msa0192890 | Msa1182960 | -0.813062 | 3.094894e-51 | -8.615850e-47 |
| Msa0192890 | Msa1192790 | -0.844646 | 6.643720e-59 | -8.615850e-47 |
| Msa0192890 | Msa1203090 | -0.873209 | 1.755208e-67 | -8.615850e-47 |
| Msa0192890 | Msa1203210 | -0.806536 | 7.844099e-50 | -8.615850e-47 |
| Msa0192890 | Msa1215660 | -0.807802 | 4.230887e-50 | -8.615850e-47 |
| Msa0192890 | Msa1223600 | -0.815419 | 9.333604e-52 | -8.615850e-47 |
| Msa0192890 | Msa1227090 | -0.803524 | 3.345584e-49 | -8.615850e-47 |
| Msa0192890 | Msa1235960 | -0.828092 | 1.089532e-54 | -8.615850e-47 |
| Msa0192890 | Msa1235990 | -0.834655 | 2.643859e-56 | -8.615850e-47 |
| Msa0192890 | Msa1239870 | 0.809986 | 1.442820e-50 | -8.615850e-47 |
| Msa0192890 | Msa1251500 | 0.821201 | 4.579528e-53 | -8.615850e-47 |
| Msa0192890 | Msa1252220 | -0.830009 | 3.738423e-55 | -8.615850e-47 |
| Msa0192890 | Msa1255500 | -0.816362 | 5.749783e-52 | -8.615850e-47 |
| Msa0192890 | Msa1258600 | 0.874998 | 4.356830e-68 | -8.615850e-47 |
| Msa0192890 | Msa1267800 | -0.808114 | 3.631290e-50 | -8.615850e-47 |
| Msa0192890 | Msa1295840 | -0.828366 | 9.355747e-55 | -8.615850e-47 |
| Msa0192890 | Msa1298440 | 0.862533 | 4.738648e-64 | -8.615850e-47 |
| Msa0192890 | Msa1304980 | 0.854502 | 1.179119e-61 | -8.615850e-47 |
| Msa0192890 | Msa1314810 | 0.819217 | 1.303846e-52 | -8.615850e-47 |
| Msa0192890 | Msa1316090 | -0.838394 | 2.952121e-57 | -8.615850e-47 |
| Msa0192890 | Msa1327400 | -0.846980 | 1.544317e-59 | -8.615850e-47 |
| Msa0192890 | Msa1327420 | -0.844586 | 6.895593e-59 | -8.615850e-47 |
| Msa0192890 | Msa1327690 | -0.812391 | 4.340297e-51 | -8.615850e-47 |
| Msa0192890 | Msa1356230 | -0.806746 | 7.081806e-50 | -8.615850e-47 |
| Msa0192890 | Msa1359880 | -0.821264 | 4.427647e-53 | -8.615850e-47 |
| Msa0192890 | Msa1368800 | -0.804076 | 2.570162e-49 | -8.615850e-47 |
| Msa0192890 | Msa1369220 | -0.813171 | 2.929756e-51 | -8.615850e-47 |
| Msa0192890 | Msa1374210 | -0.822019 | 2.963724e-53 | -8.615850e-47 |
| Msa0192890 | Msa1375640 | 0.813855 | 2.072240e-51 | -8.615850e-47 |
| Msa0192890 | Msa1376520 | 0.801175 | 1.019443e-48 | -8.615850e-47 |
| Msa0192890 | Msa1395700 | -0.863409 | 2.540754e-64 | -8.615850e-47 |
| Msa0192890 | Msa1398110 | 0.812334 | 4.466308e-51 | -8.615850e-47 |
| Msa0192890 | Msa1400600 | -0.802810 | 4.701689e-49 | -8.615850e-47 |
| Msa0192890 | Msa1400940 | 0.875884 | 2.166154e-68 | -8.615850e-47 |
| Msa0192890 | Msa1402000 | 0.814658 | 1.377027e-51 | -8.615850e-47 |
| Msa0192890 | Msa1426690 | -0.847074 | 1.455191e-59 | -8.615850e-47 |
| Msa0192890 | Msa1429190 | 0.801557 | 8.510467e-49 | -8.615850e-47 |
| Msa0192890 | Msa1433060 | -0.844350 | 7.983166e-59 | -8.615850e-47 |
| Msa0192890 | Msa1449510 | -0.812608 | 3.891481e-51 | -8.615850e-47 |
| Msa0192890 | Msa1450710 | 0.870494 | 1.398962e-66 | -8.615850e-47 |
| Msa0192890 | Msa1459930 | 0.800736 | 1.252884e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192890 | MtrunA17_Chr2g0283471 | 97.611 | 586 | 10 | 1 | 1 | 586 | 1 | 582 | 0.0 | 1180 |
| Msa0192890 | MtrunA17_Chr7g0242961 | 82.155 | 566 | 101 | 0 | 21 | 586 | 38 | 603 | 0.0 | 984 |
| Msa0192890 | MtrunA17_Chr4g0007071 | 78.223 | 574 | 125 | 0 | 13 | 586 | 34 | 607 | 0.0 | 952 |
| Msa0192890 | MtrunA17_Chr5g0420011 | 78.049 | 574 | 126 | 0 | 13 | 586 | 34 | 607 | 0.0 | 950 |
| Msa0192890 | MtrunA17_Chr7g0242981 | 75.815 | 583 | 120 | 2 | 4 | 586 | 28 | 589 | 0.0 | 915 |
| Msa0192890 | MtrunA17_Chr2g0279461 | 65.116 | 215 | 47 | 1 | 25 | 211 | 51 | 265 | 5.65e-99 | 301 |
| Msa0192890 | MtrunA17_Chr2g0279471 | 67.241 | 116 | 38 | 0 | 468 | 583 | 17 | 132 | 2.64e-49 | 167 |
| Msa0192890 | MtrunA17_Chr2g0290681 | 23.230 | 551 | 369 | 16 | 30 | 547 | 67 | 596 | 3.48e-17 | 85.1 |
| Msa0192890 | MtrunA17_Chr3g0132201 | 23.178 | 535 | 357 | 15 | 9 | 512 | 57 | 568 | 5.96e-17 | 84.3 |
| Msa0192890 | MtrunA17_Chr2g0281881 | 22.656 | 512 | 340 | 16 | 30 | 512 | 88 | 572 | 9.24e-15 | 77.4 |
| Msa0192890 | MtrunA17_Chr6g0449041 | 22.835 | 508 | 310 | 21 | 31 | 492 | 11 | 482 | 8.96e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192890 | AT5G54960.1 | 81.062 | 565 | 107 | 0 | 22 | 586 | 43 | 607 | 0.0 | 974 |
| Msa0192890 | AT5G01320.1 | 78.559 | 583 | 120 | 1 | 9 | 586 | 21 | 603 | 0.0 | 964 |
| Msa0192890 | AT4G33070.1 | 78.646 | 576 | 123 | 0 | 11 | 586 | 32 | 607 | 0.0 | 963 |
| Msa0192890 | AT5G01330.1 | 77.975 | 563 | 124 | 0 | 24 | 586 | 30 | 592 | 0.0 | 935 |
| Msa0192890 | AT3G48560.1 | 22.563 | 554 | 368 | 17 | 30 | 547 | 103 | 631 | 4.97e-13 | 72.4 |
Find 171 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAATTTGTATATTTAATT+TGG | 0.147828 | 2_1:+8685761 | Msa0192890:three_prime_UTR |
| CTTAACTGCATTGTCTAAAA+AGG | 0.176719 | 2_1:+8684271 | Msa0192890:CDS |
| CCGATTGGGCTGTATAATTA+AGG | 0.241271 | 2_1:-8684198 | None:intergenic |
| CGCGATGTCTTCTCTGTTCC+CGG | 0.267229 | 2_1:+8682418 | Msa0192890:CDS |
| AGCATTTCCCCTCTCCATTA+TGG | 0.274068 | 2_1:-8685375 | None:intergenic |
| GCCTTTGCTACCCTAAGTTT+TGG | 0.287789 | 2_1:-8683939 | None:intergenic |
| CACATTTCATTGGAACATAC+TGG | 0.298376 | 2_1:+8684051 | Msa0192890:CDS |
| CCATTCTAGCAACTCTTTGC+TGG | 0.311297 | 2_1:-8685639 | None:intergenic |
| AGAATTCTTCATCATACTAT+TGG | 0.312759 | 2_1:+8682691 | Msa0192890:CDS |
| TGTTCTATTCAAGCACATTC+AGG | 0.312908 | 2_1:+8684391 | Msa0192890:CDS |
| CCGGAGGGCATTACAGCTAT+TGG | 0.321768 | 2_1:-8684002 | None:intergenic |
| TTCTGGTACAAGTCCTTTAC+CGG | 0.332305 | 2_1:-8684021 | None:intergenic |
| GACGGCGGATGGAGCACAAC+TGG | 0.332857 | 2_1:-8682329 | None:intergenic |
| CATACAATGTGATCAAGAAT+TGG | 0.342392 | 2_1:+8685326 | Msa0192890:CDS |
| ATTGGCAATGGTCTTTCCTT+AGG | 0.347746 | 2_1:+8684227 | Msa0192890:CDS |
| CAATGGTCTTTCCTTAGGTT+GGG | 0.348448 | 2_1:+8684232 | Msa0192890:CDS |
| ATATGCATAATGCAGTAATT+AGG | 0.356907 | 2_1:-8685720 | None:intergenic |
| TCCGTTTGCCTGAGAATTGC+GGG | 0.357039 | 2_1:+8684850 | Msa0192890:CDS |
| GCAATGGTCTTTCCTTAGGT+TGG | 0.372204 | 2_1:+8684231 | Msa0192890:CDS |
| GTACCATAGTCATTAGAATT+AGG | 0.372904 | 2_1:-8682664 | None:intergenic |
| CAACCTATGCTTATATAAAC+AGG | 0.377211 | 2_1:-8683355 | None:intergenic |
| AGTATTCTCAACGCCATTGC+CGG | 0.382049 | 2_1:+8682598 | Msa0192890:CDS |
| CAATTCTTGATCACATTGTA+TGG | 0.382941 | 2_1:-8685325 | None:intergenic |
| GAAAATCATCCACATTTCAT+TGG | 0.391339 | 2_1:+8684041 | Msa0192890:CDS |
| CAATTGATCCATACTGCATC+TGG | 0.392111 | 2_1:-8684990 | None:intergenic |
| GAAGCAATTGCAACTGCTAC+TGG | 0.392822 | 2_1:+8685563 | Msa0192890:CDS |
| CCTTAATTATACAGCCCAAT+CGG | 0.396259 | 2_1:+8684198 | Msa0192890:CDS |
| AATAGAACATTAACTCTAAG+AGG | 0.396585 | 2_1:-8684377 | None:intergenic |
| CGATGGGCGGCCACCTTGCA+CGG | 0.405963 | 2_1:+8682374 | Msa0192890:CDS |
| AGCATAGGTTGTAATCTTCC+TGG | 0.407316 | 2_1:+8683367 | Msa0192890:CDS |
| GGACCTAATTCTAATGACTA+TGG | 0.411083 | 2_1:+8682661 | Msa0192890:CDS |
| CAGATGCAGTATGGATCAAT+TGG | 0.413027 | 2_1:+8684991 | Msa0192890:CDS |
| TGAGCTCCGGCTCAGCGATC+AGG | 0.413257 | 2_1:-8682468 | None:intergenic |
| TATGAATTCCAGATGCAGTA+TGG | 0.413567 | 2_1:+8684982 | Msa0192890:CDS |
| TTAATATGGTTAAGTTTGGT+TGG | 0.413924 | 2_1:-8682158 | None:intergenic |
| TATATGCAGGGTAAGCAATC+AGG | 0.434839 | 2_1:+8683842 | Msa0192890:intron |
| TCGTGGGCGGGCCAAAACTT+AGG | 0.435343 | 2_1:+8683928 | Msa0192890:CDS |
| TTTGGCCCGCCCACGATCAC+TGG | 0.439101 | 2_1:-8683921 | None:intergenic |
| TTATAGTGGAGGACATGTAT+AGG | 0.440452 | 2_1:+8685790 | Msa0192890:three_prime_UTR |
| CAGCAAAGAGTTGCTAGAAT+GGG | 0.446474 | 2_1:+8685640 | Msa0192890:CDS |
| AAAGGCACAGAAGGCTTTCA+TGG | 0.450180 | 2_1:+8683956 | Msa0192890:CDS |
| AGCTTACAGTGAAAACTTGC+CGG | 0.452863 | 2_1:+8682621 | Msa0192890:CDS |
| AAAGTTGGATGAGGAATTCC+AGG | 0.455082 | 2_1:-8683385 | None:intergenic |
| TGCTGCAACGAGCTGAATGC+TGG | 0.455532 | 2_1:+8682502 | Msa0192890:CDS |
| TTCAATGACTATAGTTCGGT+TGG | 0.457129 | 2_1:+8684146 | Msa0192890:CDS |
| CGAACTATAGTCATTGAAGA+TGG | 0.460060 | 2_1:-8684141 | None:intergenic |
| TATAACCTCCATTGTTAATG+AGG | 0.464139 | 2_1:-8685276 | None:intergenic |
| CCAGCAAAGAGTTGCTAGAA+TGG | 0.466543 | 2_1:+8685639 | Msa0192890:CDS |
| ATACAATGTGATCAAGAATT+GGG | 0.467312 | 2_1:+8685327 | Msa0192890:CDS |
| ATGACTTACCCGCAATTCTC+AGG | 0.469236 | 2_1:-8684858 | None:intergenic |
| GATGGAGCACAACTGGGAGG+AGG | 0.469465 | 2_1:-8682322 | None:intergenic |
| TTGCCAATGGTGACCCGATT+GGG | 0.471157 | 2_1:-8684212 | None:intergenic |
| GCTGTAATGCCCTCCGGTAA+AGG | 0.472150 | 2_1:+8684008 | Msa0192890:CDS |
| AGTTGCTAGAATGGGGATCC+CGG | 0.472564 | 2_1:+8685648 | Msa0192890:CDS |
| CATCTTCAATGACTATAGTT+CGG | 0.473413 | 2_1:+8684142 | Msa0192890:CDS |
| TAATAAGAATTACATACAAC+AGG | 0.473583 | 2_1:-8685935 | None:intergenic |
| GCCGCCCATCGTTCCATCAC+AGG | 0.477265 | 2_1:-8682362 | None:intergenic |
| TTGCCGGTGATTTGTATTGT+TGG | 0.479771 | 2_1:+8682637 | Msa0192890:CDS |
| TAGCTGAAACCGGAGATTCA+TGG | 0.480081 | 2_1:+8684811 | Msa0192890:CDS |
| CGTGGGCGGGCCAAAACTTA+GGG | 0.484670 | 2_1:+8683929 | Msa0192890:CDS |
| GCACGGCGCCTCGTCGAGAT+CGG | 0.485692 | 2_1:+8682391 | Msa0192890:CDS |
| ATACTCATTGTTGATAAAGA+AGG | 0.491540 | 2_1:+8684169 | Msa0192890:CDS |
| CGCCGGGCATTCCTTTGAAG+CGG | 0.492468 | 2_1:+8684342 | Msa0192890:CDS |
| GCCGGGCATTCCTTTGAAGC+GGG | 0.494061 | 2_1:+8684343 | Msa0192890:CDS |
| ACACAAACTATCAAACTCAA+TGG | 0.495489 | 2_1:+8682282 | Msa0192890:exon |
| TGGTCAGTAGGTGCTACTCT+TGG | 0.498559 | 2_1:+8685015 | Msa0192890:CDS |
| ATAATGGAGAGGGGAAATGC+TGG | 0.498584 | 2_1:+8685377 | Msa0192890:CDS |
| GTCCGTCCCTTCACCTGTGA+TGG | 0.499685 | 2_1:+8682349 | Msa0192890:CDS |
| AAGTGAAGAGGTTTATGAAA+TGG | 0.499978 | 2_1:-8682183 | None:intergenic |
| TACATACAACAGGATATCAT+TGG | 0.501330 | 2_1:-8685925 | None:intergenic |
| GGATCAATTGGTTGGTCAGT+AGG | 0.502445 | 2_1:+8685003 | Msa0192890:CDS |
| TCATCCTTCTCCCGCTTCAA+AGG | 0.503104 | 2_1:-8684353 | None:intergenic |
| ACTGCTGTAATAGCTGAAAC+CGG | 0.503719 | 2_1:+8684801 | Msa0192890:CDS |
| CTGTCAGTACTAGCTACTGT+GGG | 0.503887 | 2_1:+8684078 | Msa0192890:CDS |
| AACACACGCGCCAACTCCCT+TGG | 0.506506 | 2_1:-8682551 | None:intergenic |
| CTTAATTATACAGCCCAATC+GGG | 0.507111 | 2_1:+8684199 | Msa0192890:CDS |
| TCAGGCAGTGGTGAATAACT+TGG | 0.509647 | 2_1:+8683276 | Msa0192890:intron |
| GTGAAGGGACGGACGGCGGA+TGG | 0.511628 | 2_1:-8682340 | None:intergenic |
| TACGCACGTGCCAAGGGAGT+TGG | 0.512127 | 2_1:+8682541 | Msa0192890:CDS |
| GGCTGTTAGCAGCAGCAACC+CGG | 0.512218 | 2_1:-8685667 | None:intergenic |
| AAGAGTTAAATTGAAGTCAC+CGG | 0.515268 | 2_1:-8682437 | None:intergenic |
| ACATTTCATTGGAACATACT+GGG | 0.516280 | 2_1:+8684052 | Msa0192890:CDS |
| TGACCACCTGATCGCTGAGC+CGG | 0.516519 | 2_1:+8682462 | Msa0192890:CDS |
| CCGGTGATTTGTATTGTTGG+AGG | 0.519985 | 2_1:+8682640 | Msa0192890:CDS |
| TCTCGACGAGGCGCCGTGCA+AGG | 0.521803 | 2_1:-8682387 | None:intergenic |
| TGACGGTTACGCACGTGCCA+AGG | 0.521812 | 2_1:+8682534 | Msa0192890:CDS |
| ACAGTTAAACCATGAATCTC+CGG | 0.523001 | 2_1:-8684820 | None:intergenic |
| ATTGCCAATGGTGACCCGAT+TGG | 0.524019 | 2_1:-8684213 | None:intergenic |
| TGAAGCCAGTGATCGTGGGC+GGG | 0.526274 | 2_1:+8683916 | Msa0192890:CDS |
| ACCCGCAATTCTCAGGCAAA+CGG | 0.528878 | 2_1:-8684851 | None:intergenic |
| CATTCCTTTGAAGCGGGAGA+AGG | 0.531683 | 2_1:+8684349 | Msa0192890:CDS |
| ACAGGGTCCCTAGCAAAAGT+TGG | 0.532482 | 2_1:-8683400 | None:intergenic |
| AGCTGTGAAGCCAGTGATCG+TGG | 0.532532 | 2_1:+8683911 | Msa0192890:CDS |
| ATTGAAGTTGAGATTCATGA+TGG | 0.533621 | 2_1:+8685301 | Msa0192890:CDS |
| ATGGAGTTTGCAGAAGCTAG+TGG | 0.535258 | 2_1:+8683975 | Msa0192890:CDS |
| CCGTAGAATCTATGTTCCGC+CGG | 0.536077 | 2_1:+8684325 | Msa0192890:CDS |
| CAGCCCAATCGGGTCACCAT+TGG | 0.536193 | 2_1:+8684209 | Msa0192890:CDS |
| CTCCGTTTGCCTGAGAATTG+CGG | 0.539254 | 2_1:+8684849 | Msa0192890:CDS |
| TCTATTGGGGATTAGGAGGA+CGG | 0.540406 | 2_1:-8685688 | None:intergenic |
| AAGCCTGTTTATATAAGCAT+AGG | 0.541294 | 2_1:+8683352 | Msa0192890:CDS |
| ATGGAGCACAACTGGGAGGA+GGG | 0.542344 | 2_1:-8682321 | None:intergenic |
| TCCCGCTTCAAAGGAATGCC+CGG | 0.545573 | 2_1:-8684344 | None:intergenic |
| TGCTACTCTTGGATATGCAC+AGG | 0.546594 | 2_1:+8685026 | Msa0192890:CDS |
| CATCGTTCCATCACAGGTGA+AGG | 0.549457 | 2_1:-8682356 | None:intergenic |
| GACGGTTACGCACGTGCCAA+GGG | 0.554158 | 2_1:+8682535 | Msa0192890:CDS |
| GCCAAAACTTAGGGTAGCAA+AGG | 0.554357 | 2_1:+8683938 | Msa0192890:CDS |
| TTTGTGAGTGCCATCCATAA+TGG | 0.556042 | 2_1:+8685361 | Msa0192890:CDS |
| GTGAAGCCAGTGATCGTGGG+CGG | 0.556799 | 2_1:+8683915 | Msa0192890:CDS |
| ATGGATGGCACTCACAAAGC+GGG | 0.559447 | 2_1:-8685356 | None:intergenic |
| TTCACCTGTGATGGAACGAT+GGG | 0.561828 | 2_1:+8682358 | Msa0192890:CDS |
| TGCAGTATGGATCAATTGGT+TGG | 0.563971 | 2_1:+8684995 | Msa0192890:CDS |
| GCTGTTAGCAGCAGCAACCC+GGG | 0.564051 | 2_1:-8685666 | None:intergenic |
| ACGGCGGATGGAGCACAACT+GGG | 0.566889 | 2_1:-8682328 | None:intergenic |
| ACCTGTGATGGAACGATGGG+CGG | 0.568178 | 2_1:+8682361 | Msa0192890:CDS |
| TTCACTGTAAGCTCCGGCAA+TGG | 0.568212 | 2_1:-8682611 | None:intergenic |
| CTTCACCTGTGATGGAACGA+TGG | 0.568221 | 2_1:+8682357 | Msa0192890:CDS |
| CCTTATTTAGGTGACGGCAC+AGG | 0.570395 | 2_1:+8685210 | Msa0192890:intron |
| AATCGGGTCACCATTGGCAA+TGG | 0.570764 | 2_1:+8684215 | Msa0192890:CDS |
| TGCAACACTTGAGGACAAGA+TGG | 0.571581 | 2_1:-8685870 | None:intergenic |
| GGGGAAATGCTGGACTGCTA+AGG | 0.572838 | 2_1:+8685387 | Msa0192890:CDS |
| TAGGGTAGCAAAGGCACAGA+AGG | 0.572977 | 2_1:+8683947 | Msa0192890:CDS |
| TTTCCCCTCTCCATTATGGA+TGG | 0.575380 | 2_1:-8685371 | None:intergenic |
| CAACCGACGAGGTTGAGCTC+CGG | 0.576672 | 2_1:-8682481 | None:intergenic |
| ATCTTCCTCATTAACAATGG+AGG | 0.578555 | 2_1:+8685271 | Msa0192890:CDS |
| CGTAGAATCTATGTTCCGCC+GGG | 0.578586 | 2_1:+8684326 | Msa0192890:CDS |
| GTTGCTAGAATGGGGATCCC+GGG | 0.579978 | 2_1:+8685649 | Msa0192890:CDS |
| GGCAGTGGTGAATAACTTGG+AGG | 0.581002 | 2_1:+8683279 | Msa0192890:intron |
| AGCCATGAAAACCCAACCTA+AGG | 0.581125 | 2_1:-8684243 | None:intergenic |
| CCGGCGGAACATAGATTCTA+CGG | 0.582973 | 2_1:-8684325 | None:intergenic |
| CCAATAGCTGTAATGCCCTC+CGG | 0.583459 | 2_1:+8684002 | Msa0192890:CDS |
| GTGATTGCATGCATTGGTGA+TGG | 0.584370 | 2_1:+8685066 | Msa0192890:CDS |
| TCCCTAGCAAAAGTTGGATG+AGG | 0.588011 | 2_1:-8683394 | None:intergenic |
| ACAACAAAGTGCAACACTTG+AGG | 0.589324 | 2_1:-8685879 | None:intergenic |
| GAACTATAGTCATTGAAGAT+GGG | 0.590504 | 2_1:-8684140 | None:intergenic |
| GAGCCGGAGCTCAACCTCGT+CGG | 0.599794 | 2_1:+8682478 | Msa0192890:CDS |
| CGACGAGGCGCCGTGCAAGG+TGG | 0.601198 | 2_1:-8682384 | None:intergenic |
| TTCCATCACAGGTGAAGGGA+CGG | 0.603435 | 2_1:-8682351 | None:intergenic |
| GCTCCGGCTCAGCGATCAGG+TGG | 0.604206 | 2_1:-8682465 | None:intergenic |
| TTTGTGTGTGTGAAGTGAAG+AGG | 0.610841 | 2_1:-8682195 | None:intergenic |
| AGAAGCAGCTGTCGAAGAAG+CGG | 0.612852 | 2_1:+8683872 | Msa0192890:CDS |
| ATTTCAACAATGATCCGTTG+TGG | 0.614449 | 2_1:+8685235 | Msa0192890:CDS |
| ACGGTAATTCTCCACAGCTG+TGG | 0.615891 | 2_1:-8684306 | None:intergenic |
| AGAGTTAAATTGAAGTCACC+GGG | 0.615952 | 2_1:-8682436 | None:intergenic |
| GTTGAACAGGAACTGCTAAG+TGG | 0.616520 | 2_1:+8684774 | Msa0192890:intron |
| TGCAGGGTAAGCAATCAGGA+AGG | 0.617642 | 2_1:+8683846 | Msa0192890:intron |
| ATCATCTTCCTCATTAACAA+TGG | 0.620276 | 2_1:+8685268 | Msa0192890:CDS |
| GCTGTCAGTACTAGCTACTG+TGG | 0.622291 | 2_1:+8684077 | Msa0192890:CDS |
| CCTCCAACAATACAAATCAC+CGG | 0.622440 | 2_1:-8682640 | None:intergenic |
| ATCGTTCCATCACAGGTGAA+GGG | 0.622898 | 2_1:-8682355 | None:intergenic |
| TGGTACAAGTCCTTTACCGG+AGG | 0.626304 | 2_1:-8684018 | None:intergenic |
| AGTGCCATCCATAATGGAGA+GGG | 0.626807 | 2_1:+8685367 | Msa0192890:CDS |
| GCTGTGAAGCCAGTGATCGT+GGG | 0.629235 | 2_1:+8683912 | Msa0192890:CDS |
| GGTACAAGTCCTTTACCGGA+GGG | 0.630851 | 2_1:-8684017 | None:intergenic |
| AAGCGTGTGATTGCATGCAT+TGG | 0.633443 | 2_1:+8685060 | Msa0192890:CDS |
| CAGTATGTTCCAATGAAATG+TGG | 0.633740 | 2_1:-8684050 | None:intergenic |
| ATCACAGGTGAAGGGACGGA+CGG | 0.639749 | 2_1:-8682347 | None:intergenic |
| TAAGGAAAGACCATTGCCAA+TGG | 0.647139 | 2_1:-8684225 | None:intergenic |
| CGCGAACGCCGATCTCGACG+AGG | 0.647172 | 2_1:-8682399 | None:intergenic |
| AGCAAAGAGTTGCTAGAATG+GGG | 0.647655 | 2_1:+8685641 | Msa0192890:CDS |
| ACAGGTGAAGGGACGGACGG+CGG | 0.660278 | 2_1:-8682344 | None:intergenic |
| GCAGGGTAAGCAATCAGGAA+GGG | 0.661004 | 2_1:+8683847 | Msa0192890:intron |
| AATGCTGGATATGCTGCTGA+CGG | 0.662126 | 2_1:+8682517 | Msa0192890:CDS |
| GCGGATGGAGCACAACTGGG+AGG | 0.668015 | 2_1:-8682325 | None:intergenic |
| CATTTCATTGGAACATACTG+GGG | 0.673408 | 2_1:+8684053 | Msa0192890:CDS |
| GAGTGCCATCCATAATGGAG+AGG | 0.675947 | 2_1:+8685366 | Msa0192890:CDS |
| GCTCGTTGCAGCAACCGACG+AGG | 0.688833 | 2_1:-8682492 | None:intergenic |
| TATGGATGGCACTCACAAAG+CGG | 0.696212 | 2_1:-8685357 | None:intergenic |
| CGCTTCAAAGGAATGCCCGG+CGG | 0.703133 | 2_1:-8684341 | None:intergenic |
| GTGAGTATAGGTACGTACAG+AGG | 0.709245 | 2_1:+8685529 | Msa0192890:intron |
| GTGCCATCCATAATGGAGAG+GGG | 0.709547 | 2_1:+8685368 | Msa0192890:CDS |
| TGTCAGTACTAGCTACTGTG+GGG | 0.752691 | 2_1:+8684079 | Msa0192890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAATCATTAATTAAAG+TGG | - | chr2_1:8683735-8683754 | None:intergenic | 10.0% |
| !! | AAATAAATTAATTAATGAAC+AGG | - | chr2_1:8685172-8685191 | None:intergenic | 10.0% |
| !!! | TTTATGAAATGGTTTTAATA+TGG | - | chr2_1:8682175-8682194 | None:intergenic | 15.0% |
| !!! | TTTTATCTTATATATAGGAT+TGG | - | chr2_1:8682807-8682826 | None:intergenic | 15.0% |
| !!! | CTCAATTTTATCTTATATAT+AGG | - | chr2_1:8682812-8682831 | None:intergenic | 15.0% |
| !! | TTAATGATTATTTATCCATA+TGG | + | chr2_1:8683741-8683760 | Msa0192890:intron | 15.0% |
| !! | ACAGTAATATAGTAATTTAA+TGG | - | chr2_1:8684723-8684742 | None:intergenic | 15.0% |
| !!! | TTAATTAATTTATTTTCGGA+TGG | + | chr2_1:8685177-8685196 | Msa0192890:intron | 15.0% |
| !! | AAATAATAAACGAACTTAGA+AGG | - | chr2_1:8683579-8683598 | None:intergenic | 20.0% |
| !!! | ACATTTTTACAATTATATGC+AGG | + | chr2_1:8683829-8683848 | Msa0192890:intron | 20.0% |
| !!! | CATTTTTACAATTATATGCA+GGG | + | chr2_1:8683830-8683849 | Msa0192890:intron | 20.0% |
| !! | TAACAGGATAAATCTAAAAA+AGG | - | chr2_1:8684526-8684545 | None:intergenic | 20.0% |
| !!! | TTAGGAATTGATTTTCTATT+GGG | - | chr2_1:8685705-8685724 | None:intergenic | 20.0% |
| !!! | ATTAGGAATTGATTTTCTAT+TGG | - | chr2_1:8685706-8685725 | None:intergenic | 20.0% |
| !! | TAATAAGAATTACATACAAC+AGG | - | chr2_1:8685938-8685957 | None:intergenic | 20.0% |
| !!! | GGTTTTAATATGGTTAAGTT+TGG | - | chr2_1:8682165-8682184 | None:intergenic | 25.0% |
| ! | AGAATTCTTCATCATACTAT+TGG | + | chr2_1:8682691-8682710 | Msa0192890:CDS | 25.0% |
| !!! | TCAACAAAAGTTGATGTATT+TGG | + | chr2_1:8682832-8682851 | Msa0192890:intron | 25.0% |
| !! | ATTTGGTTCAAAAATCCAAA+TGG | + | chr2_1:8682868-8682887 | Msa0192890:intron | 25.0% |
| ! | AAAATCCAAATGGATGTATA+TGG | + | chr2_1:8682878-8682897 | Msa0192890:intron | 25.0% |
| ! | AGATTCTCAATGATCAAAAT+AGG | - | chr2_1:8683233-8683252 | None:intergenic | 25.0% |
| ! | AGTCATACATTCTTTCTAAA+AGG | - | chr2_1:8683505-8683524 | None:intergenic | 25.0% |
| ! | TAGAAAGAATGTATGACTAA+TGG | + | chr2_1:8683507-8683526 | Msa0192890:intron | 25.0% |
| ! | CATTTAACATATGTCTTCAA+GGG | - | chr2_1:8683702-8683721 | None:intergenic | 25.0% |
| ! | ATTTATCCATATGGTATTCA+TGG | + | chr2_1:8683750-8683769 | Msa0192890:intron | 25.0% |
| ! | TTTGTTCATGCATTCATATT+TGG | + | chr2_1:8683779-8683798 | Msa0192890:intron | 25.0% |
| !! | ATACTCATTGTTGATAAAGA+AGG | + | chr2_1:8684169-8684188 | Msa0192890:CDS | 25.0% |
| ! | AATAGAACATTAACTCTAAG+AGG | - | chr2_1:8684380-8684399 | None:intergenic | 25.0% |
| !!! | AATATGCAATATTGTTTCTG+TGG | + | chr2_1:8684694-8684713 | Msa0192890:intron | 25.0% |
| ! | TATTTAATTGCTGAACTGAA+TGG | - | chr2_1:8684753-8684772 | None:intergenic | 25.0% |
| ! | AGCAATTAAATATGTTGAAC+AGG | + | chr2_1:8684761-8684780 | Msa0192890:intron | 25.0% |
| ! | ATACAATGTGATCAAGAATT+GGG | + | chr2_1:8685327-8685346 | Msa0192890:CDS | 25.0% |
| ! | CAAATTCTAAACTAAAACAG+TGG | - | chr2_1:8685442-8685461 | None:intergenic | 25.0% |
| !!! | CACTGTTTTAGTTTAGAATT+TGG | + | chr2_1:8685440-8685459 | Msa0192890:intron | 25.0% |
| !! | TTAGTTTAGAATTTGGTTGA+AGG | + | chr2_1:8685447-8685466 | Msa0192890:intron | 25.0% |
| !!! | AAATTCACTTTTGTGAGTAT+AGG | + | chr2_1:8685517-8685536 | Msa0192890:intron | 25.0% |
| !!! | TAGGAATTGATTTTCTATTG+GGG | - | chr2_1:8685704-8685723 | None:intergenic | 25.0% |
| ! | ATATGCATAATGCAGTAATT+AGG | - | chr2_1:8685723-8685742 | None:intergenic | 25.0% |
| !!! | TAATTTGGTGCATTTTATAG+TGG | + | chr2_1:8685776-8685795 | Msa0192890:three_prime_UTR | 25.0% |
| ! | TAGGATAAATGTGACAAAAA+TGG | + | chr2_1:8685809-8685828 | Msa0192890:three_prime_UTR | 25.0% |
| AAGTGAAGAGGTTTATGAAA+TGG | - | chr2_1:8682186-8682205 | None:intergenic | 30.0% | |
| ACACAAACTATCAAACTCAA+TGG | + | chr2_1:8682282-8682301 | Msa0192890:exon | 30.0% | |
| AAGAGTTAAATTGAAGTCAC+CGG | - | chr2_1:8682440-8682459 | None:intergenic | 30.0% | |
| GTACCATAGTCATTAGAATT+AGG | - | chr2_1:8682667-8682686 | None:intergenic | 30.0% | |
| ! | TTGGTTGAAGTTGAAGTATT+TGG | + | chr2_1:8682851-8682870 | Msa0192890:intron | 30.0% |
| TTGAACCATATACATCCATT+TGG | - | chr2_1:8682886-8682905 | None:intergenic | 30.0% | |
| !! | TATTGACTCAAATTTCTCAC+CGG | + | chr2_1:8682925-8682944 | Msa0192890:intron | 30.0% |
| TTCTCAAATTATTACTCCTC+CGG | - | chr2_1:8682947-8682966 | None:intergenic | 30.0% | |
| TTGAGAATCTGATGATATTG+TGG | + | chr2_1:8683243-8683262 | Msa0192890:intron | 30.0% | |
| ! | TATTGTGGTGTGAATTTTTC+AGG | + | chr2_1:8683258-8683277 | Msa0192890:intron | 30.0% |
| AAGCCTGTTTATATAAGCAT+AGG | + | chr2_1:8683352-8683371 | Msa0192890:CDS | 30.0% | |
| CAACCTATGCTTATATAAAC+AGG | - | chr2_1:8683358-8683377 | None:intergenic | 30.0% | |
| AATTATAGCATTCGTTCATG+AGG | + | chr2_1:8683620-8683639 | Msa0192890:intron | 30.0% | |
| CCATTTAACATATGTCTTCA+AGG | - | chr2_1:8683703-8683722 | None:intergenic | 30.0% | |
| CCTTGAAGACATATGTTAAA+TGG | + | chr2_1:8683700-8683719 | Msa0192890:intron | 30.0% | |
| !! | ATTAATTAAAGTGGCTCTAG+TGG | - | chr2_1:8683726-8683745 | None:intergenic | 30.0% |
| ! | ATGAAATGTGGATGATTTTC+TGG | - | chr2_1:8684041-8684060 | None:intergenic | 30.0% |
| GAAAATCATCCACATTTCAT+TGG | + | chr2_1:8684041-8684060 | Msa0192890:CDS | 30.0% | |
| ACATTTCATTGGAACATACT+GGG | + | chr2_1:8684052-8684071 | Msa0192890:CDS | 30.0% | |
| GAACTATAGTCATTGAAGAT+GGG | - | chr2_1:8684143-8684162 | None:intergenic | 30.0% | |
| CATCTTCAATGACTATAGTT+CGG | + | chr2_1:8684142-8684161 | Msa0192890:CDS | 30.0% | |
| CTTAACTGCATTGTCTAAAA+AGG | + | chr2_1:8684271-8684290 | Msa0192890:CDS | 30.0% | |
| AATTCAGTCTAGTGATTCTT+TGG | + | chr2_1:8684445-8684464 | Msa0192890:intron | 30.0% | |
| GCATTAGCTATTTACTACAA+TGG | - | chr2_1:8684497-8684516 | None:intergenic | 30.0% | |
| !! | ATGTATGTGTTGATTATGAG+TGG | + | chr2_1:8684589-8684608 | Msa0192890:intron | 30.0% |
| TGGAATTCATAACTGAAAGA+TGG | - | chr2_1:8684973-8684992 | None:intergenic | 30.0% | |
| ATCATCTTCCTCATTAACAA+TGG | + | chr2_1:8685268-8685287 | Msa0192890:CDS | 30.0% | |
| TATAACCTCCATTGTTAATG+AGG | - | chr2_1:8685279-8685298 | None:intergenic | 30.0% | |
| ATTGAAGTTGAGATTCATGA+TGG | + | chr2_1:8685301-8685320 | Msa0192890:CDS | 30.0% | |
| CAATTCTTGATCACATTGTA+TGG | - | chr2_1:8685328-8685347 | None:intergenic | 30.0% | |
| CATACAATGTGATCAAGAAT+TGG | + | chr2_1:8685326-8685345 | Msa0192890:CDS | 30.0% | |
| ! | TTGATTTTCTATTGGGGATT+AGG | - | chr2_1:8685698-8685717 | None:intergenic | 30.0% |
| TACATACAACAGGATATCAT+TGG | - | chr2_1:8685928-8685947 | None:intergenic | 30.0% | |
| AGAGTTAAATTGAAGTCACC+GGG | - | chr2_1:8682439-8682458 | None:intergenic | 35.0% | |
| ! | TGTGTTGTGACTTTTACAGT+CGG | + | chr2_1:8682568-8682587 | Msa0192890:CDS | 35.0% |
| GGACCTAATTCTAATGACTA+TGG | + | chr2_1:8682661-8682680 | Msa0192890:CDS | 35.0% | |
| ! | TCAAACGATCACATGTTTTC+AGG | + | chr2_1:8682747-8682766 | Msa0192890:CDS | 35.0% |
| TTTGAGAACATATGTCAGAC+CGG | + | chr2_1:8682959-8682978 | Msa0192890:intron | 35.0% | |
| GTGCAAGAAAAAATGGAACA+GGG | - | chr2_1:8683420-8683439 | None:intergenic | 35.0% | |
| !!! | TTCCATTTTTTCTTGCACCA+AGG | + | chr2_1:8683422-8683441 | Msa0192890:CDS | 35.0% |
| ! | TACCTTGGTGCAAGAAAAAA+TGG | - | chr2_1:8683427-8683446 | None:intergenic | 35.0% |
| GGTAAGCAAAATACATACCT+TGG | - | chr2_1:8683442-8683461 | None:intergenic | 35.0% | |
| CAGATAACAGAAACTTCACA+AGG | - | chr2_1:8683463-8683482 | None:intergenic | 35.0% | |
| ! | GTATGACTAATGGTAGTGAT+AGG | + | chr2_1:8683517-8683536 | Msa0192890:intron | 35.0% |
| CATGATCCATGAATACCATA+TGG | - | chr2_1:8683759-8683778 | None:intergenic | 35.0% | |
| CAGTATGTTCCAATGAAATG+TGG | - | chr2_1:8684053-8684072 | None:intergenic | 35.0% | |
| CACATTTCATTGGAACATAC+TGG | + | chr2_1:8684051-8684070 | Msa0192890:CDS | 35.0% | |
| CATTTCATTGGAACATACTG+GGG | + | chr2_1:8684053-8684072 | Msa0192890:CDS | 35.0% | |
| !! | GCTGATGCTTATGTTTTTGT+TGG | + | chr2_1:8684116-8684135 | Msa0192890:CDS | 35.0% |
| CGAACTATAGTCATTGAAGA+TGG | - | chr2_1:8684144-8684163 | None:intergenic | 35.0% | |
| TTCAATGACTATAGTTCGGT+TGG | + | chr2_1:8684146-8684165 | Msa0192890:CDS | 35.0% | |
| CCTTAATTATACAGCCCAAT+CGG | + | chr2_1:8684198-8684217 | Msa0192890:CDS | 35.0% | |
| CTTAATTATACAGCCCAATC+GGG | + | chr2_1:8684199-8684218 | Msa0192890:CDS | 35.0% | |
| TGTTCTATTCAAGCACATTC+AGG | + | chr2_1:8684391-8684410 | Msa0192890:CDS | 35.0% | |
| TCCTGTTAAATCATGTGACA+CGG | + | chr2_1:8684538-8684557 | Msa0192890:intron | 35.0% | |
| !! | GTTGATTATGAGTGGATTAG+AGG | + | chr2_1:8684597-8684616 | Msa0192890:intron | 35.0% |
| TAAAACATTGCCCAAAAACG+AGG | + | chr2_1:8684622-8684641 | Msa0192890:intron | 35.0% | |
| ACAGTTAAACCATGAATCTC+CGG | - | chr2_1:8684823-8684842 | None:intergenic | 35.0% | |
| TCAGACAATGTAGATTGTAG+AGG | - | chr2_1:8684927-8684946 | None:intergenic | 35.0% | |
| TATGAATTCCAGATGCAGTA+TGG | + | chr2_1:8684982-8685001 | Msa0192890:CDS | 35.0% | |
| !! | GGATGTATGATGCCTTATTT+AGG | + | chr2_1:8685198-8685217 | Msa0192890:intron | 35.0% |
| !! | ATGATGCCTTATTTAGGTGA+CGG | + | chr2_1:8685204-8685223 | Msa0192890:intron | 35.0% |
| ATTTCAACAATGATCCGTTG+TGG | + | chr2_1:8685235-8685254 | Msa0192890:CDS | 35.0% | |
| !!! | TGATGCTATTTTGTCCACAA+CGG | - | chr2_1:8685252-8685271 | None:intergenic | 35.0% |
| ATCTTCCTCATTAACAATGG+AGG | + | chr2_1:8685271-8685290 | Msa0192890:CDS | 35.0% | |
| ! | TATAGAAGTTTTTGCGCACA+AGG | + | chr2_1:8685610-8685629 | Msa0192890:CDS | 35.0% |
| ! | ATTTTCTATTGGGGATTAGG+AGG | - | chr2_1:8685695-8685714 | None:intergenic | 35.0% |
| !! | TTTGGTGCATTTTATAGTGG+AGG | + | chr2_1:8685779-8685798 | Msa0192890:three_prime_UTR | 35.0% |
| ! | TTATAGTGGAGGACATGTAT+AGG | + | chr2_1:8685790-8685809 | Msa0192890:three_prime_UTR | 35.0% |
| TTTGTGTGTGTGAAGTGAAG+AGG | - | chr2_1:8682198-8682217 | None:intergenic | 40.0% | |
| ! | CAAGTTTTCACTGTAAGCTC+CGG | - | chr2_1:8682620-8682639 | None:intergenic | 40.0% |
| AGCTTACAGTGAAAACTTGC+CGG | + | chr2_1:8682621-8682640 | Msa0192890:CDS | 40.0% | |
| ! | TTGCCGGTGATTTGTATTGT+TGG | + | chr2_1:8682637-8682656 | Msa0192890:CDS | 40.0% |
| CCTCCAACAATACAAATCAC+CGG | - | chr2_1:8682643-8682662 | None:intergenic | 40.0% | |
| ATACTTCAGTGCCATAGCAA+TGG | - | chr2_1:8683113-8683132 | None:intergenic | 40.0% | |
| AGCATAGGTTGTAATCTTCC+TGG | + | chr2_1:8683367-8683386 | Msa0192890:CDS | 40.0% | |
| AAAGTTGGATGAGGAATTCC+AGG | - | chr2_1:8683388-8683407 | None:intergenic | 40.0% | |
| ! | TTCCTCATCCAACTTTTGCT+AGG | + | chr2_1:8683392-8683411 | Msa0192890:CDS | 40.0% |
| ! | TCCTCATCCAACTTTTGCTA+GGG | + | chr2_1:8683393-8683412 | Msa0192890:CDS | 40.0% |
| GGTGCAAGAAAAAATGGAAC+AGG | - | chr2_1:8683421-8683440 | None:intergenic | 40.0% | |
| TCGTTCATGAGGTGTAAGTT+CGG | + | chr2_1:8683631-8683650 | Msa0192890:intron | 40.0% | |
| AGTTTGACCTTGGAACTTCA+AGG | + | chr2_1:8683661-8683680 | Msa0192890:intron | 40.0% | |
| GTTTGACCTTGGAACTTCAA+GGG | + | chr2_1:8683662-8683681 | Msa0192890:intron | 40.0% | |
| TATATGCAGGGTAAGCAATC+AGG | + | chr2_1:8683842-8683861 | Msa0192890:intron | 40.0% | |
| TTCTGGTACAAGTCCTTTAC+CGG | - | chr2_1:8684024-8684043 | None:intergenic | 40.0% | |
| CCGATTGGGCTGTATAATTA+AGG | - | chr2_1:8684201-8684220 | None:intergenic | 40.0% | |
| TAAGGAAAGACCATTGCCAA+TGG | - | chr2_1:8684228-8684247 | None:intergenic | 40.0% | |
| ATTGGCAATGGTCTTTCCTT+AGG | + | chr2_1:8684227-8684246 | Msa0192890:CDS | 40.0% | |
| CAATGGTCTTTCCTTAGGTT+GGG | + | chr2_1:8684232-8684251 | Msa0192890:CDS | 40.0% | |
| !!! | TTCCTTAGGTTGGGTTTTCA+TGG | + | chr2_1:8684241-8684260 | Msa0192890:CDS | 40.0% |
| ACCGTGTCACATGATTTAAC+AGG | - | chr2_1:8684542-8684561 | None:intergenic | 40.0% | |
| !! | CCGTTATGTTCCTCGTTTTT+GGG | - | chr2_1:8684635-8684654 | None:intergenic | 40.0% |
| CCCAAAAACGAGGAACATAA+CGG | + | chr2_1:8684632-8684651 | Msa0192890:intron | 40.0% | |
| ! | ACCGTTATGTTCCTCGTTTT+TGG | - | chr2_1:8684636-8684655 | None:intergenic | 40.0% |
| ACTGCTGTAATAGCTGAAAC+CGG | + | chr2_1:8684801-8684820 | Msa0192890:CDS | 40.0% | |
| CAATTGATCCATACTGCATC+TGG | - | chr2_1:8684993-8685012 | None:intergenic | 40.0% | |
| CAGATGCAGTATGGATCAAT+TGG | + | chr2_1:8684991-8685010 | Msa0192890:CDS | 40.0% | |
| TGCAGTATGGATCAATTGGT+TGG | + | chr2_1:8684995-8685014 | Msa0192890:CDS | 40.0% | |
| TAATGAACAGGCTTACTTGC+TGG | - | chr2_1:8685160-8685179 | None:intergenic | 40.0% | |
| TTTGTGAGTGCCATCCATAA+TGG | + | chr2_1:8685361-8685380 | Msa0192890:CDS | 40.0% | |
| CAGCAAAGAGTTGCTAGAAT+GGG | + | chr2_1:8685640-8685659 | Msa0192890:CDS | 40.0% | |
| AGCAAAGAGTTGCTAGAATG+GGG | + | chr2_1:8685641-8685660 | Msa0192890:CDS | 40.0% | |
| ACAACAAAGTGCAACACTTG+AGG | - | chr2_1:8685882-8685901 | None:intergenic | 40.0% | |
| ATCGTTCCATCACAGGTGAA+GGG | - | chr2_1:8682358-8682377 | None:intergenic | 45.0% | |
| ! | TTCACCTGTGATGGAACGAT+GGG | + | chr2_1:8682358-8682377 | Msa0192890:CDS | 45.0% |
| AATGCTGGATATGCTGCTGA+CGG | + | chr2_1:8682517-8682536 | Msa0192890:CDS | 45.0% | |
| ! | GTTGTGACTTTTACAGTCGG+TGG | + | chr2_1:8682571-8682590 | Msa0192890:CDS | 45.0% |
| AGTATTCTCAACGCCATTGC+CGG | + | chr2_1:8682598-8682617 | Msa0192890:CDS | 45.0% | |
| ! | CCGGTGATTTGTATTGTTGG+AGG | + | chr2_1:8682640-8682659 | Msa0192890:CDS | 45.0% |
| CGAAGCTCTTGCGAAAAATC+AGG | - | chr2_1:8682721-8682740 | None:intergenic | 45.0% | |
| TGACTCAAATTTCTCACCGG+AGG | + | chr2_1:8682928-8682947 | Msa0192890:intron | 45.0% | |
| !! | CTCCACTTTGGTGCCATTAA+TGG | + | chr2_1:8682983-8683002 | Msa0192890:intron | 45.0% |
| TGCCATTAATGGCACCAAAG+TGG | - | chr2_1:8682988-8683007 | None:intergenic | 45.0% | |
| !! | ATGCAATGGTATGGTGCCAT+TGG | - | chr2_1:8683011-8683030 | None:intergenic | 45.0% |
| TGTGTGATGTGTGTGTGTGT+GGG | - | chr2_1:8683040-8683059 | None:intergenic | 45.0% | |
| CACCAATGACACCATTGCTA+TGG | + | chr2_1:8683099-8683118 | Msa0192890:intron | 45.0% | |
| !! | TGCCATAGCAATGGTGTCAT+TGG | - | chr2_1:8683104-8683123 | None:intergenic | 45.0% |
| !!! | GGTGTGAATTTTTCAGGCAG+TGG | + | chr2_1:8683264-8683283 | Msa0192890:intron | 45.0% |
| TCAGGCAGTGGTGAATAACT+TGG | + | chr2_1:8683276-8683295 | Msa0192890:intron | 45.0% | |
| TCCCTAGCAAAAGTTGGATG+AGG | - | chr2_1:8683397-8683416 | None:intergenic | 45.0% | |
| TTCATGAGGTGTAAGTTCGG+TGG | + | chr2_1:8683634-8683653 | Msa0192890:intron | 45.0% | |
| CTTCATCCCTTGAAGTTCCA+AGG | - | chr2_1:8683671-8683690 | None:intergenic | 45.0% | |
| GCCAAAACTTAGGGTAGCAA+AGG | + | chr2_1:8683938-8683957 | Msa0192890:CDS | 45.0% | |
| ! | GCCTTTGCTACCCTAAGTTT+TGG | - | chr2_1:8683942-8683961 | None:intergenic | 45.0% |
| ! | AAAGGCACAGAAGGCTTTCA+TGG | + | chr2_1:8683956-8683975 | Msa0192890:CDS | 45.0% |
| ATGGAGTTTGCAGAAGCTAG+TGG | + | chr2_1:8683975-8683994 | Msa0192890:CDS | 45.0% | |
| CTGTCAGTACTAGCTACTGT+GGG | + | chr2_1:8684078-8684097 | Msa0192890:CDS | 45.0% | |
| TGTCAGTACTAGCTACTGTG+GGG | + | chr2_1:8684079-8684098 | Msa0192890:CDS | 45.0% | |
| GCAATGGTCTTTCCTTAGGT+TGG | + | chr2_1:8684231-8684250 | Msa0192890:CDS | 45.0% | |
| AGCCATGAAAACCCAACCTA+AGG | - | chr2_1:8684246-8684265 | None:intergenic | 45.0% | |
| GAAGAAAAACACCACAGCTG+TGG | + | chr2_1:8684295-8684314 | Msa0192890:CDS | 45.0% | |
| GTTGAACAGGAACTGCTAAG+TGG | + | chr2_1:8684774-8684793 | Msa0192890:intron | 45.0% | |
| TAGCTGAAACCGGAGATTCA+TGG | + | chr2_1:8684811-8684830 | Msa0192890:CDS | 45.0% | |
| ATGACTTACCCGCAATTCTC+AGG | - | chr2_1:8684861-8684880 | None:intergenic | 45.0% | |
| ! | GGATCAATTGGTTGGTCAGT+AGG | + | chr2_1:8685003-8685022 | Msa0192890:CDS | 45.0% |
| TGCTACTCTTGGATATGCAC+AGG | + | chr2_1:8685026-8685045 | Msa0192890:CDS | 45.0% | |
| AAGCGTGTGATTGCATGCAT+TGG | + | chr2_1:8685060-8685079 | Msa0192890:CDS | 45.0% | |
| ! | GTGATTGCATGCATTGGTGA+TGG | + | chr2_1:8685066-8685085 | Msa0192890:CDS | 45.0% |
| !!! | CATTGGTGATGGCAGTTTTC+AGG | + | chr2_1:8685077-8685096 | Msa0192890:CDS | 45.0% |
| TATGGATGGCACTCACAAAG+CGG | - | chr2_1:8685360-8685379 | None:intergenic | 45.0% | |
| ! | AGTGCCATCCATAATGGAGA+GGG | + | chr2_1:8685367-8685386 | Msa0192890:CDS | 45.0% |
| TTTCCCCTCTCCATTATGGA+TGG | - | chr2_1:8685374-8685393 | None:intergenic | 45.0% | |
| AGCATTTCCCCTCTCCATTA+TGG | - | chr2_1:8685378-8685397 | None:intergenic | 45.0% | |
| ! | ATAATGGAGAGGGGAAATGC+TGG | + | chr2_1:8685377-8685396 | Msa0192890:CDS | 45.0% |
| GTGAGTATAGGTACGTACAG+AGG | + | chr2_1:8685529-8685548 | Msa0192890:intron | 45.0% | |
| GAAGCAATTGCAACTGCTAC+TGG | + | chr2_1:8685563-8685582 | Msa0192890:CDS | 45.0% | |
| CCATTCTAGCAACTCTTTGC+TGG | - | chr2_1:8685642-8685661 | None:intergenic | 45.0% | |
| CCAGCAAAGAGTTGCTAGAA+TGG | + | chr2_1:8685639-8685658 | Msa0192890:CDS | 45.0% | |
| TCTATTGGGGATTAGGAGGA+CGG | - | chr2_1:8685691-8685710 | None:intergenic | 45.0% | |
| TGCAACACTTGAGGACAAGA+TGG | - | chr2_1:8685873-8685892 | None:intergenic | 45.0% | |
| !!! | TTCATTAATTAATTTATTTT+CGG | + | chr2_1:8685173-8685192 | Msa0192890:intron | 5.0% |
| !!! | TATAATTTGTATATTTAATT+TGG | + | chr2_1:8685761-8685780 | Msa0192890:three_prime_UTR | 5.0% |
| TTCCATCACAGGTGAAGGGA+CGG | - | chr2_1:8682354-8682373 | None:intergenic | 50.0% | |
| CATCGTTCCATCACAGGTGA+AGG | - | chr2_1:8682359-8682378 | None:intergenic | 50.0% | |
| ! | CTTCACCTGTGATGGAACGA+TGG | + | chr2_1:8682357-8682376 | Msa0192890:CDS | 50.0% |
| TTCACTGTAAGCTCCGGCAA+TGG | - | chr2_1:8682614-8682633 | None:intergenic | 50.0% | |
| AATGGCACCAAAGTGGAGTC+CGG | - | chr2_1:8682981-8683000 | None:intergenic | 50.0% | |
| !! | GGTGCCATTAATGGCACCAA+TGG | + | chr2_1:8682992-8683011 | Msa0192890:intron | 50.0% |
| !! | GGTGCCATTGGTGCCATTAA+TGG | - | chr2_1:8682999-8683018 | None:intergenic | 50.0% |
| GTGTGATGTGTGTGTGTGTG+GGG | - | chr2_1:8683039-8683058 | None:intergenic | 50.0% | |
| GTGTGTGATGTGTGTGTGTG+TGG | - | chr2_1:8683041-8683060 | None:intergenic | 50.0% | |
| CACACATCCCCACACATCAA+CGG | + | chr2_1:8683058-8683077 | Msa0192890:intron | 50.0% | |
| AATCCTGGCCGTTGATGTGT+GGG | - | chr2_1:8683069-8683088 | None:intergenic | 50.0% | |
| !! | AACGGCCAGGATTGGTTCTT+TGG | + | chr2_1:8683076-8683095 | Msa0192890:intron | 50.0% |
| ! | TGGTGCCAAAGAACCAATCC+TGG | - | chr2_1:8683084-8683103 | None:intergenic | 50.0% |
| AACTGACACGTGTCAGACAG+TGG | - | chr2_1:8683154-8683173 | None:intergenic | 50.0% | |
| GGCAGTGGTGAATAACTTGG+AGG | + | chr2_1:8683279-8683298 | Msa0192890:intron | 50.0% | |
| ACAGGGTCCCTAGCAAAAGT+TGG | - | chr2_1:8683403-8683422 | None:intergenic | 50.0% | |
| TGCAGGGTAAGCAATCAGGA+AGG | + | chr2_1:8683846-8683865 | Msa0192890:intron | 50.0% | |
| GCAGGGTAAGCAATCAGGAA+GGG | + | chr2_1:8683847-8683866 | Msa0192890:intron | 50.0% | |
| AGAAGCAGCTGTCGAAGAAG+CGG | + | chr2_1:8683872-8683891 | Msa0192890:CDS | 50.0% | |
| ! | TAGGGTAGCAAAGGCACAGA+AGG | + | chr2_1:8683947-8683966 | Msa0192890:CDS | 50.0% |
| CCAATAGCTGTAATGCCCTC+CGG | + | chr2_1:8684002-8684021 | Msa0192890:CDS | 50.0% | |
| GGTACAAGTCCTTTACCGGA+GGG | - | chr2_1:8684020-8684039 | None:intergenic | 50.0% | |
| TGGTACAAGTCCTTTACCGG+AGG | - | chr2_1:8684021-8684040 | None:intergenic | 50.0% | |
| GCTGTCAGTACTAGCTACTG+TGG | + | chr2_1:8684077-8684096 | Msa0192890:CDS | 50.0% | |
| TTGCCAATGGTGACCCGATT+GGG | - | chr2_1:8684215-8684234 | None:intergenic | 50.0% | |
| ATTGCCAATGGTGACCCGAT+TGG | - | chr2_1:8684216-8684235 | None:intergenic | 50.0% | |
| AATCGGGTCACCATTGGCAA+TGG | + | chr2_1:8684215-8684234 | Msa0192890:CDS | 50.0% | |
| ACGGTAATTCTCCACAGCTG+TGG | - | chr2_1:8684309-8684328 | None:intergenic | 50.0% | |
| CCGGCGGAACATAGATTCTA+CGG | - | chr2_1:8684328-8684347 | None:intergenic | 50.0% | |
| CCGTAGAATCTATGTTCCGC+CGG | + | chr2_1:8684325-8684344 | Msa0192890:CDS | 50.0% | |
| CGTAGAATCTATGTTCCGCC+GGG | + | chr2_1:8684326-8684345 | Msa0192890:CDS | 50.0% | |
| !! | CATTCCTTTGAAGCGGGAGA+AGG | + | chr2_1:8684349-8684368 | Msa0192890:CDS | 50.0% |
| TCATCCTTCTCCCGCTTCAA+AGG | - | chr2_1:8684356-8684375 | None:intergenic | 50.0% | |
| CTCCGTTTGCCTGAGAATTG+CGG | + | chr2_1:8684849-8684868 | Msa0192890:CDS | 50.0% | |
| TCCGTTTGCCTGAGAATTGC+GGG | + | chr2_1:8684850-8684869 | Msa0192890:CDS | 50.0% | |
| ACCCGCAATTCTCAGGCAAA+CGG | - | chr2_1:8684854-8684873 | None:intergenic | 50.0% | |
| !! | TGGTCAGTAGGTGCTACTCT+TGG | + | chr2_1:8685015-8685034 | Msa0192890:CDS | 50.0% |
| CCTGTGCCGTCACCTAAATA+AGG | - | chr2_1:8685213-8685232 | None:intergenic | 50.0% | |
| ! | CCTTATTTAGGTGACGGCAC+AGG | + | chr2_1:8685210-8685229 | Msa0192890:intron | 50.0% |
| ATGGATGGCACTCACAAAGC+GGG | - | chr2_1:8685359-8685378 | None:intergenic | 50.0% | |
| ! | GAGTGCCATCCATAATGGAG+AGG | + | chr2_1:8685366-8685385 | Msa0192890:CDS | 50.0% |
| ! | GTGCCATCCATAATGGAGAG+GGG | + | chr2_1:8685368-8685387 | Msa0192890:CDS | 50.0% |
| AGTTGCTAGAATGGGGATCC+CGG | + | chr2_1:8685648-8685667 | Msa0192890:CDS | 50.0% | |
| ATGGAGCACAACTGGGAGGA+GGG | - | chr2_1:8682324-8682343 | None:intergenic | 55.0% | |
| ATCACAGGTGAAGGGACGGA+CGG | - | chr2_1:8682350-8682369 | None:intergenic | 55.0% | |
| ! | ACCTGTGATGGAACGATGGG+CGG | + | chr2_1:8682361-8682380 | Msa0192890:CDS | 55.0% |
| CGCGATGTCTTCTCTGTTCC+CGG | + | chr2_1:8682418-8682437 | Msa0192890:CDS | 55.0% | |
| TGCTGCAACGAGCTGAATGC+TGG | + | chr2_1:8682502-8682521 | Msa0192890:CDS | 55.0% | |
| TGTCAGACCGGACTCCACTT+TGG | + | chr2_1:8682971-8682990 | Msa0192890:intron | 55.0% | |
| GGGGTGGAGATGCAATGGTA+TGG | - | chr2_1:8683020-8683039 | None:intergenic | 55.0% | |
| TGTGTGGGGTGGAGATGCAA+TGG | - | chr2_1:8683025-8683044 | None:intergenic | 55.0% | |
| TGATGTGTGTGTGTGTGGGG+TGG | - | chr2_1:8683036-8683055 | None:intergenic | 55.0% | |
| ATCCTGGCCGTTGATGTGTG+GGG | - | chr2_1:8683068-8683087 | None:intergenic | 55.0% | |
| CAATCCTGGCCGTTGATGTG+TGG | - | chr2_1:8683070-8683089 | None:intergenic | 55.0% | |
| CACACATCAACGGCCAGGAT+TGG | + | chr2_1:8683068-8683087 | Msa0192890:intron | 55.0% | |
| ACAGTGGCATGGGTCTGACA+GGG | - | chr2_1:8683138-8683157 | None:intergenic | 55.0% | |
| CACGTGTCAGACAGTGGCAT+GGG | - | chr2_1:8683148-8683167 | None:intergenic | 55.0% | |
| ACACGTGTCAGACAGTGGCA+TGG | - | chr2_1:8683149-8683168 | None:intergenic | 55.0% | |
| CGGTGGTACGAGTTTGACCT+TGG | + | chr2_1:8683651-8683670 | Msa0192890:intron | 55.0% | |
| AGCTGTGAAGCCAGTGATCG+TGG | + | chr2_1:8683911-8683930 | Msa0192890:CDS | 55.0% | |
| GCTGTGAAGCCAGTGATCGT+GGG | + | chr2_1:8683912-8683931 | Msa0192890:CDS | 55.0% | |
| !! | CCGGAGGGCATTACAGCTAT+TGG | - | chr2_1:8684005-8684024 | None:intergenic | 55.0% |
| GCTGTAATGCCCTCCGGTAA+AGG | + | chr2_1:8684008-8684027 | Msa0192890:CDS | 55.0% | |
| TCCCGCTTCAAAGGAATGCC+CGG | - | chr2_1:8684347-8684366 | None:intergenic | 55.0% | |
| GGGGAAATGCTGGACTGCTA+AGG | + | chr2_1:8685387-8685406 | Msa0192890:CDS | 55.0% | |
| GTTGCTAGAATGGGGATCCC+GGG | + | chr2_1:8685649-8685668 | Msa0192890:CDS | 55.0% | |
| GATGGAGCACAACTGGGAGG+AGG | - | chr2_1:8682325-8682344 | None:intergenic | 60.0% | |
| ACGGCGGATGGAGCACAACT+GGG | - | chr2_1:8682331-8682350 | None:intergenic | 60.0% | |
| GTCCGTCCCTTCACCTGTGA+TGG | + | chr2_1:8682349-8682368 | Msa0192890:CDS | 60.0% | |
| TGACCACCTGATCGCTGAGC+CGG | + | chr2_1:8682462-8682481 | Msa0192890:CDS | 60.0% | |
| CAACCGACGAGGTTGAGCTC+CGG | - | chr2_1:8682484-8682503 | None:intergenic | 60.0% | |
| TGACGGTTACGCACGTGCCA+AGG | + | chr2_1:8682534-8682553 | Msa0192890:CDS | 60.0% | |
| GACGGTTACGCACGTGCCAA+GGG | + | chr2_1:8682535-8682554 | Msa0192890:CDS | 60.0% | |
| TACGCACGTGCCAAGGGAGT+TGG | + | chr2_1:8682541-8682560 | Msa0192890:CDS | 60.0% | |
| AACACACGCGCCAACTCCCT+TGG | - | chr2_1:8682554-8682573 | None:intergenic | 60.0% | |
| ATCCCCACACATCAACGGCC+AGG | + | chr2_1:8683063-8683082 | Msa0192890:intron | 60.0% | |
| GACAGTGGCATGGGTCTGAC+AGG | - | chr2_1:8683139-8683158 | None:intergenic | 60.0% | |
| GTGAAGCCAGTGATCGTGGG+CGG | + | chr2_1:8683915-8683934 | Msa0192890:CDS | 60.0% | |
| TGAAGCCAGTGATCGTGGGC+GGG | + | chr2_1:8683916-8683935 | Msa0192890:CDS | 60.0% | |
| TCGTGGGCGGGCCAAAACTT+AGG | + | chr2_1:8683928-8683947 | Msa0192890:CDS | 60.0% | |
| CGTGGGCGGGCCAAAACTTA+GGG | + | chr2_1:8683929-8683948 | Msa0192890:CDS | 60.0% | |
| CAGCCCAATCGGGTCACCAT+TGG | + | chr2_1:8684209-8684228 | Msa0192890:CDS | 60.0% | |
| CGCTTCAAAGGAATGCCCGG+CGG | - | chr2_1:8684344-8684363 | None:intergenic | 60.0% | |
| ! | CGCCGGGCATTCCTTTGAAG+CGG | + | chr2_1:8684342-8684361 | Msa0192890:CDS | 60.0% |
| !! | GCCGGGCATTCCTTTGAAGC+GGG | + | chr2_1:8684343-8684362 | Msa0192890:CDS | 60.0% |
| GCTGTTAGCAGCAGCAACCC+GGG | - | chr2_1:8685669-8685688 | None:intergenic | 60.0% | |
| GGCTGTTAGCAGCAGCAACC+CGG | - | chr2_1:8685670-8685689 | None:intergenic | 60.0% | |
| GCGGATGGAGCACAACTGGG+AGG | - | chr2_1:8682328-8682347 | None:intergenic | 65.0% | |
| GACGGCGGATGGAGCACAAC+TGG | - | chr2_1:8682332-8682351 | None:intergenic | 65.0% | |
| ACAGGTGAAGGGACGGACGG+CGG | - | chr2_1:8682347-8682366 | None:intergenic | 65.0% | |
| GCCGCCCATCGTTCCATCAC+AGG | - | chr2_1:8682365-8682384 | None:intergenic | 65.0% | |
| TGAGCTCCGGCTCAGCGATC+AGG | - | chr2_1:8682471-8682490 | None:intergenic | 65.0% | |
| GAGCCGGAGCTCAACCTCGT+CGG | + | chr2_1:8682478-8682497 | Msa0192890:CDS | 65.0% | |
| GCTCGTTGCAGCAACCGACG+AGG | - | chr2_1:8682495-8682514 | None:intergenic | 65.0% | |
| TTTGGCCCGCCCACGATCAC+TGG | - | chr2_1:8683924-8683943 | None:intergenic | 65.0% | |
| GTGAAGGGACGGACGGCGGA+TGG | - | chr2_1:8682343-8682362 | None:intergenic | 70.0% | |
| CGATGGGCGGCCACCTTGCA+CGG | + | chr2_1:8682374-8682393 | Msa0192890:CDS | 70.0% | |
| !! | TCTCGACGAGGCGCCGTGCA+AGG | - | chr2_1:8682390-8682409 | None:intergenic | 70.0% |
| GCACGGCGCCTCGTCGAGAT+CGG | + | chr2_1:8682391-8682410 | Msa0192890:CDS | 70.0% | |
| CGCGAACGCCGATCTCGACG+AGG | - | chr2_1:8682402-8682421 | None:intergenic | 70.0% | |
| GCTCCGGCTCAGCGATCAGG+TGG | - | chr2_1:8682468-8682487 | None:intergenic | 70.0% | |
| !! | CGACGAGGCGCCGTGCAAGG+TGG | - | chr2_1:8682387-8682406 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 8682160 | 8685992 | 8682160 | ID=Msa0192890;Name=Msa0192890 |
| chr2_1 | mRNA | 8682160 | 8685992 | 8682160 | ID=Msa0192890-mRNA-1;Parent=Msa0192890;Name=Msa0192890-mRNA-1;_AED=0.02;_eAED=0.02;_QI=141|1|1|1|1|1|7|283|586 |
| chr2_1 | exon | 8682160 | 8682768 | 8682160 | ID=Msa0192890-mRNA-1:exon:3975;Parent=Msa0192890-mRNA-1 |
| chr2_1 | exon | 8683280 | 8683443 | 8683280 | ID=Msa0192890-mRNA-1:exon:3976;Parent=Msa0192890-mRNA-1 |
| chr2_1 | exon | 8683851 | 8684412 | 8683851 | ID=Msa0192890-mRNA-1:exon:3977;Parent=Msa0192890-mRNA-1 |
| chr2_1 | exon | 8684783 | 8684871 | 8684783 | ID=Msa0192890-mRNA-1:exon:3978;Parent=Msa0192890-mRNA-1 |
| chr2_1 | exon | 8684981 | 8685098 | 8684981 | ID=Msa0192890-mRNA-1:exon:3979;Parent=Msa0192890-mRNA-1 |
| chr2_1 | exon | 8685220 | 8685408 | 8685220 | ID=Msa0192890-mRNA-1:exon:3980;Parent=Msa0192890-mRNA-1 |
| chr2_1 | exon | 8685539 | 8685992 | 8685539 | ID=Msa0192890-mRNA-1:exon:3981;Parent=Msa0192890-mRNA-1 |
| chr2_1 | five_prime_UTR | 8682160 | 8682300 | 8682160 | ID=Msa0192890-mRNA-1:five_prime_utr;Parent=Msa0192890-mRNA-1 |
| chr2_1 | CDS | 8682301 | 8682768 | 8682301 | ID=Msa0192890-mRNA-1:cds;Parent=Msa0192890-mRNA-1 |
| chr2_1 | CDS | 8683280 | 8683443 | 8683280 | ID=Msa0192890-mRNA-1:cds;Parent=Msa0192890-mRNA-1 |
| chr2_1 | CDS | 8683851 | 8684412 | 8683851 | ID=Msa0192890-mRNA-1:cds;Parent=Msa0192890-mRNA-1 |
| chr2_1 | CDS | 8684783 | 8684871 | 8684783 | ID=Msa0192890-mRNA-1:cds;Parent=Msa0192890-mRNA-1 |
| chr2_1 | CDS | 8684981 | 8685098 | 8684981 | ID=Msa0192890-mRNA-1:cds;Parent=Msa0192890-mRNA-1 |
| chr2_1 | CDS | 8685220 | 8685408 | 8685220 | ID=Msa0192890-mRNA-1:cds;Parent=Msa0192890-mRNA-1 |
| chr2_1 | CDS | 8685539 | 8685709 | 8685539 | ID=Msa0192890-mRNA-1:cds;Parent=Msa0192890-mRNA-1 |
| chr2_1 | three_prime_UTR | 8685710 | 8685992 | 8685710 | ID=Msa0192890-mRNA-1:three_prime_utr;Parent=Msa0192890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
