Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276190 | XP_013444435.1 | 97.768 | 224 | 5 | 0 | 1 | 224 | 1 | 224 | 3.64e-155 | 439 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276190 | sp|Q9SKI2|VPS2A_ARATH | 87.556 | 225 | 26 | 2 | 1 | 224 | 2 | 225 | 1.91e-124 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276190 | A0A072TY45 | 97.768 | 224 | 5 | 0 | 1 | 224 | 1 | 224 | 1.74e-155 | 439 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1276190 | -0.817779 | 2.762957e-52 | -8.615850e-47 |
| Msa0004920 | Msa1276190 | 0.808331 | 3.264874e-50 | -8.615850e-47 |
| Msa0012040 | Msa1276190 | 0.816296 | 5.950716e-52 | -8.615850e-47 |
| Msa0032610 | Msa1276190 | 0.811879 | 5.613062e-51 | -8.615850e-47 |
| Msa0043730 | Msa1276190 | 0.805604 | 1.232029e-49 | -8.615850e-47 |
| Msa0047980 | Msa1276190 | 0.809524 | 1.813805e-50 | -8.615850e-47 |
| Msa0050730 | Msa1276190 | 0.807140 | 5.844538e-50 | -8.615850e-47 |
| Msa0050760 | Msa1276190 | 0.803813 | 2.913823e-49 | -8.615850e-47 |
| Msa0057140 | Msa1276190 | 0.809772 | 1.603645e-50 | -8.615850e-47 |
| Msa0071240 | Msa1276190 | 0.807557 | 4.768948e-50 | -8.615850e-47 |
| Msa0085360 | Msa1276190 | -0.818297 | 2.109794e-52 | -8.615850e-47 |
| Msa0094920 | Msa1276190 | 0.825227 | 5.257668e-54 | -8.615850e-47 |
| Msa0095010 | Msa1276190 | 0.812406 | 4.307236e-51 | -8.615850e-47 |
| Msa0095380 | Msa1276190 | 0.800619 | 1.323919e-48 | -8.615850e-47 |
| Msa0099510 | Msa1276190 | 0.802341 | 5.873450e-49 | -8.615850e-47 |
| Msa0610430 | Msa1276190 | 0.800166 | 1.636873e-48 | -8.615850e-47 |
| Msa0615870 | Msa1276190 | 0.808284 | 3.340430e-50 | -8.615850e-47 |
| Msa0618010 | Msa1276190 | 0.807943 | 3.947981e-50 | -8.615850e-47 |
| Msa0619070 | Msa1276190 | 0.844723 | 6.337616e-59 | -8.615850e-47 |
| Msa0619470 | Msa1276190 | 0.804905 | 1.726230e-49 | -8.615850e-47 |
| Msa0633840 | Msa1276190 | 0.833620 | 4.802985e-56 | -8.615850e-47 |
| Msa0638070 | Msa1276190 | 0.807912 | 4.007909e-50 | -8.615850e-47 |
| Msa0638280 | Msa1276190 | 0.831717 | 1.424516e-55 | -8.615850e-47 |
| Msa0638320 | Msa1276190 | 0.830134 | 3.483820e-55 | -8.615850e-47 |
| Msa0669850 | Msa1276190 | 0.807724 | 4.395650e-50 | -8.615850e-47 |
| Msa0670270 | Msa1276190 | 0.805155 | 1.529941e-49 | -8.615850e-47 |
| Msa0670980 | Msa1276190 | 0.808314 | 3.292147e-50 | -8.615850e-47 |
| Msa0677270 | Msa1276190 | 0.838273 | 3.172277e-57 | -8.615850e-47 |
| Msa0679550 | Msa1276190 | 0.816412 | 5.603704e-52 | -8.615850e-47 |
| Msa0692230 | Msa1276190 | 0.803097 | 4.100738e-49 | -8.615850e-47 |
| Msa0693380 | Msa1276190 | 0.829104 | 6.202952e-55 | -8.615850e-47 |
| Msa0724830 | Msa1276190 | 0.800772 | 1.232021e-48 | -8.615850e-47 |
| Msa0739120 | Msa1276190 | 0.813820 | 2.109531e-51 | -8.615850e-47 |
| Msa0743260 | Msa1276190 | 0.810762 | 9.811009e-51 | -8.615850e-47 |
| Msa0750430 | Msa1276190 | 0.803823 | 2.900176e-49 | -8.615850e-47 |
| Msa0760380 | Msa1276190 | 0.800634 | 1.314443e-48 | -8.615850e-47 |
| Msa0788710 | Msa1276190 | 0.805894 | 1.070953e-49 | -8.615850e-47 |
| Msa0792090 | Msa1276190 | 0.813170 | 2.931106e-51 | -8.615850e-47 |
| Msa0814320 | Msa1276190 | 0.804512 | 2.084718e-49 | -8.615850e-47 |
| Msa0135380 | Msa1276190 | 0.801844 | 7.434250e-49 | -8.615850e-47 |
| Msa0152170 | Msa1276190 | 0.801928 | 7.142579e-49 | -8.615850e-47 |
| Msa0162770 | Msa1276190 | -0.808339 | 3.251146e-50 | -8.615850e-47 |
| Msa0172780 | Msa1276190 | 0.818244 | 2.168547e-52 | -8.615850e-47 |
| Msa0188630 | Msa1276190 | 0.816397 | 5.649528e-52 | -8.615850e-47 |
| Msa0219070 | Msa1276190 | 0.814247 | 1.698020e-51 | -8.615850e-47 |
| Msa0227400 | Msa1276190 | 0.805348 | 1.394233e-49 | -8.615850e-47 |
| Msa1233500 | Msa1276190 | 0.831346 | 1.758879e-55 | -8.615850e-47 |
| Msa1233890 | Msa1276190 | 0.803336 | 3.660221e-49 | -8.615850e-47 |
| Msa1249240 | Msa1276190 | 0.800131 | 1.664165e-48 | -8.615850e-47 |
| Msa1254510 | Msa1276190 | 0.803219 | 3.870197e-49 | -8.615850e-47 |
| Msa1267260 | Msa1276190 | 0.828752 | 7.547082e-55 | -8.615850e-47 |
| Msa1276190 | Msa1276440 | 0.808666 | 2.768026e-50 | -8.615850e-47 |
| Msa1276190 | Msa1294080 | 0.802290 | 6.019328e-49 | -8.615850e-47 |
| Msa1276190 | Msa1300350 | -0.833278 | 5.845049e-56 | -8.615850e-47 |
| Msa1276190 | Msa1302190 | -0.809170 | 2.159870e-50 | -8.615850e-47 |
| Msa1276190 | Msa1303160 | 0.804876 | 1.749842e-49 | -8.615850e-47 |
| Msa1276190 | Msa1306430 | 0.837315 | 5.589431e-57 | -8.615850e-47 |
| Msa1276190 | Msa1306750 | 0.823160 | 1.608759e-53 | -8.615850e-47 |
| Msa1276190 | Msa1314340 | 0.807795 | 4.244548e-50 | -8.615850e-47 |
| Msa1276190 | Msa1322190 | 0.802159 | 6.404471e-49 | -8.615850e-47 |
| Msa1276190 | Msa1328700 | 0.817863 | 2.644588e-52 | -8.615850e-47 |
| Msa1276190 | Msa1340260 | 0.831062 | 2.064974e-55 | -8.615850e-47 |
| Msa1276190 | Msa1340650 | 0.825774 | 3.903049e-54 | -8.615850e-47 |
| Msa1276190 | Msa1343070 | 0.812172 | 4.845743e-51 | -8.615850e-47 |
| Msa1276190 | Msa1369530 | 0.807961 | 3.914059e-50 | -8.615850e-47 |
| Msa1276190 | Msa1371430 | 0.834018 | 3.820754e-56 | -8.615850e-47 |
| Msa1276190 | Msa1384350 | 0.811817 | 5.790933e-51 | -8.615850e-47 |
| Msa1276190 | Msa1385670 | 0.800877 | 1.172958e-48 | -8.615850e-47 |
| Msa1276190 | Msa1386230 | 0.805720 | 1.164669e-49 | -8.615850e-47 |
| Msa1276190 | Msa1404540 | 0.817197 | 3.736713e-52 | -8.615850e-47 |
| Msa1276190 | Msa1408790 | 0.816052 | 6.746036e-52 | -8.615850e-47 |
| Msa1276190 | Msa1415640 | 0.806348 | 8.593842e-50 | -8.615850e-47 |
| Msa1276190 | Msa1431060 | 0.815840 | 7.521969e-52 | -8.615850e-47 |
| Msa1276190 | Msa1435370 | 0.815451 | 9.183132e-52 | -8.615850e-47 |
| Msa1276190 | Msa1436040 | 0.810250 | 1.265643e-50 | -8.615850e-47 |
| Msa1276190 | Msa1438700 | 0.807341 | 5.298814e-50 | -8.615850e-47 |
| Msa1276190 | Msa1439960 | 0.819061 | 1.414946e-52 | -8.615850e-47 |
| Msa1276190 | Msa1440600 | 0.805134 | 1.545450e-49 | -8.615850e-47 |
| Msa1276190 | Msa1440910 | 0.816732 | 4.750719e-52 | -8.615850e-47 |
| Msa1276190 | Msa1445420 | -0.806169 | 9.370722e-50 | -8.615850e-47 |
| Msa1276190 | Msa1465960 | 0.803403 | 3.544607e-49 | -8.615850e-47 |
| Msa0372660 | Msa1276190 | 0.802913 | 4.476200e-49 | -8.615850e-47 |
| Msa0372670 | Msa1276190 | 0.807807 | 4.220579e-50 | -8.615850e-47 |
| Msa0377530 | Msa1276190 | 0.815971 | 7.030732e-52 | -8.615850e-47 |
| Msa0380040 | Msa1276190 | 0.802020 | 6.838648e-49 | -8.615850e-47 |
| Msa0389340 | Msa1276190 | 0.807506 | 4.890568e-50 | -8.615850e-47 |
| Msa0402330 | Msa1276190 | 0.823627 | 1.251164e-53 | -8.615850e-47 |
| Msa0404000 | Msa1276190 | 0.811970 | 5.364234e-51 | -8.615850e-47 |
| Msa0404030 | Msa1276190 | 0.808435 | 3.101509e-50 | -8.615850e-47 |
| Msa0421780 | Msa1276190 | -0.833005 | 6.835629e-56 | -8.615850e-47 |
| Msa0423040 | Msa1276190 | 0.801932 | 7.129653e-49 | -8.615850e-47 |
| Msa0426330 | Msa1276190 | 0.810862 | 9.332011e-51 | -8.615850e-47 |
| Msa0427910 | Msa1276190 | 0.810796 | 9.645258e-51 | -8.615850e-47 |
| Msa0429290 | Msa1276190 | 0.808065 | 3.719660e-50 | -8.615850e-47 |
| Msa0432770 | Msa1276190 | 0.815279 | 1.002621e-51 | -8.615850e-47 |
| Msa0443920 | Msa1276190 | 0.800194 | 1.616095e-48 | -8.615850e-47 |
| Msa0449830 | Msa1276190 | 0.803062 | 4.170553e-49 | -8.615850e-47 |
| Msa0464900 | Msa1276190 | 0.814783 | 1.292019e-51 | -8.615850e-47 |
| Msa0467960 | Msa1276190 | -0.828870 | 7.069163e-55 | -8.615850e-47 |
| Msa0468130 | Msa1276190 | 0.802688 | 4.981207e-49 | -8.615850e-47 |
| Msa0473240 | Msa1276190 | 0.800224 | 1.593438e-48 | -8.615850e-47 |
| Msa0475580 | Msa1276190 | 0.813372 | 2.646977e-51 | -8.615850e-47 |
| Msa0480320 | Msa1276190 | 0.813435 | 2.562844e-51 | -8.615850e-47 |
| Msa0982270 | Msa1276190 | 0.804152 | 2.477596e-49 | -8.615850e-47 |
| Msa0993530 | Msa1276190 | 0.817389 | 3.381613e-52 | -8.615850e-47 |
| Msa1021540 | Msa1276190 | 0.831037 | 2.094345e-55 | -8.615850e-47 |
| Msa1037700 | Msa1276190 | -0.811151 | 8.080999e-51 | -8.615850e-47 |
| Msa1040890 | Msa1276190 | 0.820802 | 5.656923e-53 | -8.615850e-47 |
| Msa1072460 | Msa1276190 | -0.815220 | 1.033742e-51 | -8.615850e-47 |
| Msa1082500 | Msa1276190 | 0.815636 | 8.350660e-52 | -8.615850e-47 |
| Msa1083210 | Msa1276190 | 0.803753 | 2.998545e-49 | -8.615850e-47 |
| Msa1087470 | Msa1276190 | 0.815858 | 7.453259e-52 | -8.615850e-47 |
| Msa1092090 | Msa1276190 | 0.801753 | 7.760000e-49 | -8.615850e-47 |
| Msa0246430 | Msa1276190 | 0.816483 | 5.403960e-52 | -8.615850e-47 |
| Msa0260210 | Msa1276190 | 0.821447 | 4.018560e-53 | -8.615850e-47 |
| Msa0282250 | Msa1276190 | 0.826733 | 2.306583e-54 | -8.615850e-47 |
| Msa0294150 | Msa1276190 | 0.817827 | 2.694626e-52 | -8.615850e-47 |
| Msa0298120 | Msa1276190 | 0.824143 | 9.469567e-54 | -8.615850e-47 |
| Msa0304290 | Msa1276190 | 0.825345 | 4.931949e-54 | -8.615850e-47 |
| Msa0304330 | Msa1276190 | 0.828347 | 9.458372e-55 | -8.615850e-47 |
| Msa0305890 | Msa1276190 | 0.815443 | 9.220444e-52 | -8.615850e-47 |
| Msa0320100 | Msa1276190 | 0.806616 | 7.543934e-50 | -8.615850e-47 |
| Msa0327410 | Msa1276190 | 0.814968 | 1.175534e-51 | -8.615850e-47 |
| Msa0333720 | Msa1276190 | -0.802587 | 5.227501e-49 | -8.615850e-47 |
| Msa0335040 | Msa1276190 | 0.830683 | 2.558638e-55 | -8.615850e-47 |
| Msa0340810 | Msa1276190 | 0.814956 | 1.183223e-51 | -8.615850e-47 |
| Msa0355270 | Msa1276190 | 0.818090 | 2.349758e-52 | -8.615850e-47 |
| Msa0356890 | Msa1276190 | -0.807356 | 5.260101e-50 | -8.615850e-47 |
| Msa1124310 | Msa1276190 | 0.803676 | 3.111768e-49 | -8.615850e-47 |
| Msa1125550 | Msa1276190 | 0.814845 | 1.252105e-51 | -8.615850e-47 |
| Msa1127830 | Msa1276190 | 0.814717 | 1.336513e-51 | -8.615850e-47 |
| Msa1130210 | Msa1276190 | -0.816126 | 6.494022e-52 | -8.615850e-47 |
| Msa1171870 | Msa1276190 | 0.832837 | 7.524737e-56 | -8.615850e-47 |
| Msa1185540 | Msa1276190 | 0.809803 | 1.579503e-50 | -8.615850e-47 |
| Msa1199560 | Msa1276190 | 0.816376 | 5.709286e-52 | -8.615850e-47 |
| Msa1217830 | Msa1276190 | 0.802675 | 5.013349e-49 | -8.615850e-47 |
| Msa1217860 | Msa1276190 | 0.811143 | 8.111952e-51 | -8.615850e-47 |
| Msa0484780 | Msa1276190 | 0.813417 | 2.587421e-51 | -8.615850e-47 |
| Msa0505060 | Msa1276190 | 0.826260 | 2.990928e-54 | -8.615850e-47 |
| Msa0511490 | Msa1276190 | 0.800668 | 1.293451e-48 | -8.615850e-47 |
| Msa0517490 | Msa1276190 | 0.820164 | 7.924538e-53 | -8.615850e-47 |
| Msa0519220 | Msa1276190 | 0.811789 | 5.872704e-51 | -8.615850e-47 |
| Msa0526890 | Msa1276190 | 0.830514 | 2.814011e-55 | -8.615850e-47 |
| Msa0537190 | Msa1276190 | 0.805555 | 1.261477e-49 | -8.615850e-47 |
| Msa0547400 | Msa1276190 | 0.807276 | 5.471589e-50 | -8.615850e-47 |
| Msa0558690 | Msa1276190 | 0.802300 | 5.989133e-49 | -8.615850e-47 |
| Msa0568820 | Msa1276190 | 0.833684 | 4.631073e-56 | -8.615850e-47 |
| Msa0577220 | Msa1276190 | 0.815846 | 7.499286e-52 | -8.615850e-47 |
| Msa0585900 | Msa1276190 | 0.807672 | 4.509165e-50 | -8.615850e-47 |
| Msa0587190 | Msa1276190 | 0.812463 | 4.185859e-51 | -8.615850e-47 |
| Msa0587690 | Msa1276190 | 0.804792 | 1.822071e-49 | -8.615850e-47 |
| Msa0591770 | Msa1276190 | 0.802653 | 5.065044e-49 | -8.615850e-47 |
| Msa0593650 | Msa1276190 | 0.809211 | 2.117037e-50 | -8.615850e-47 |
| Msa0850960 | Msa1276190 | 0.804251 | 2.362947e-49 | -8.615850e-47 |
| Msa0860080 | Msa1276190 | 0.800695 | 1.277231e-48 | -8.615850e-47 |
| Msa0874500 | Msa1276190 | 0.816406 | 5.620708e-52 | -8.615850e-47 |
| Msa0882510 | Msa1276190 | 0.802148 | 6.438070e-49 | -8.615850e-47 |
| Msa0908170 | Msa1276190 | 0.811816 | 5.792455e-51 | -8.615850e-47 |
| Msa0909000 | Msa1276190 | -0.813157 | 2.950070e-51 | -8.615850e-47 |
| Msa0933290 | Msa1276190 | 0.804773 | 1.838982e-49 | -8.615850e-47 |
| Msa0933440 | Msa1276190 | 0.818069 | 2.375769e-52 | -8.615850e-47 |
| Msa0960160 | Msa1276190 | 0.802985 | 4.324979e-49 | -8.615850e-47 |
| Msa0971020 | Msa1276190 | 0.800190 | 1.619149e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276190 | MtrunA17_Chr8g0343561 | 97.768 | 224 | 5 | 0 | 1 | 224 | 1 | 224 | 3.35e-159 | 439 |
| Msa1276190 | MtrunA17_Chr2g0300321 | 85.714 | 224 | 31 | 1 | 1 | 224 | 1 | 223 | 2.65e-118 | 335 |
| Msa1276190 | MtrunA17_Chr1g0183621 | 41.096 | 219 | 118 | 1 | 4 | 222 | 7 | 214 | 5.24e-51 | 164 |
| Msa1276190 | MtrunA17_Chr2g0303251 | 39.732 | 224 | 122 | 3 | 4 | 224 | 3 | 216 | 1.26e-43 | 145 |
| Msa1276190 | MtrunA17_Chr7g0261511 | 45.662 | 219 | 108 | 2 | 4 | 222 | 3 | 210 | 5.41e-42 | 141 |
| Msa1276190 | MtrunA17_Chr4g0028231 | 27.602 | 221 | 157 | 3 | 4 | 222 | 7 | 226 | 2.39e-18 | 80.5 |
| Msa1276190 | MtrunA17_Chr2g0330571 | 25.294 | 170 | 115 | 2 | 53 | 222 | 45 | 202 | 3.21e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276190 | AT2G06530.1 | 87.556 | 225 | 26 | 2 | 1 | 224 | 2 | 225 | 1.95e-125 | 354 |
| Msa1276190 | AT2G06530.2 | 88.780 | 205 | 21 | 2 | 21 | 224 | 1 | 204 | 1.81e-113 | 323 |
| Msa1276190 | AT1G03950.1 | 42.922 | 219 | 114 | 3 | 4 | 222 | 3 | 210 | 4.34e-53 | 170 |
| Msa1276190 | AT5G44560.1 | 38.914 | 221 | 134 | 1 | 4 | 224 | 3 | 222 | 1.03e-46 | 154 |
| Msa1276190 | AT5G44560.4 | 41.477 | 176 | 103 | 0 | 4 | 179 | 3 | 178 | 5.50e-44 | 146 |
| Msa1276190 | AT5G44560.2 | 40.000 | 200 | 119 | 1 | 25 | 224 | 4 | 202 | 7.23e-43 | 144 |
| Msa1276190 | AT5G44560.3 | 37.143 | 140 | 87 | 1 | 4 | 142 | 3 | 142 | 1.57e-25 | 97.8 |
| Msa1276190 | AT5G22950.1 | 27.354 | 223 | 157 | 3 | 4 | 222 | 7 | 228 | 7.62e-17 | 76.6 |
| Msa1276190 | AT1G17730.1 | 25.000 | 196 | 133 | 2 | 27 | 222 | 19 | 200 | 8.31e-13 | 65.5 |
Find 71 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTAGATTATAACAGAAAA+TGG | 0.267692 | 8_3:-10761488 | None:intergenic |
| ATGTGATGCGTAGGAATATT+TGG | 0.269014 | 8_3:+10761086 | Msa1276190:exon |
| GGGTGTTGCTTTGAGAATTC+AGG | 0.273393 | 8_3:+10759851 | Msa1276190:CDS |
| GACAGAAGATCTTGTTAATC+AGG | 0.296889 | 8_3:+10760540 | Msa1276190:CDS |
| GCTGATCTGACCGGTTTGTT+AGG | 0.304188 | 8_3:+10761408 | Msa1276190:three_prime_UTR |
| AGCGCTATCGCAAACAAAAT+TGG | 0.305091 | 8_3:+10759019 | Msa1276190:five_prime_UTR |
| CAAGCTTAAATCACAACTTC+AGG | 0.310848 | 8_3:+10759830 | Msa1276190:CDS |
| AAATACCATTTGTCCTTGTT+TGG | 0.313748 | 8_3:-10759451 | None:intergenic |
| GATTAATTGTAACCTTAGTT+TGG | 0.324072 | 8_3:+10758961 | Msa1276190:five_prime_UTR |
| CTGCGCCAGCAGCAAAGAAC+AGG | 0.338116 | 8_3:+10760982 | Msa1276190:CDS |
| TACACAGATCTTATTAGAAT+TGG | 0.340541 | 8_3:+10761377 | Msa1276190:intron |
| TGCTGCTGGCGCAGCGGTTG+AGG | 0.345574 | 8_3:-10760973 | None:intergenic |
| CTGATCTGACCGGTTTGTTA+GGG | 0.356969 | 8_3:+10761409 | Msa1276190:three_prime_UTR |
| TTAGGGTGCTGTGAGGGTTA+TGG | 0.358019 | 8_3:+10759764 | Msa1276190:intron |
| ATCATCATTGCCCGTTGGTT+CGG | 0.375176 | 8_3:-10761015 | None:intergenic |
| GCAACCCTGTTCTTTGCTGC+TGG | 0.393522 | 8_3:-10760987 | None:intergenic |
| GGAACTTGTTTCTGAGGTAA+TGG | 0.405606 | 8_3:+10760471 | Msa1276190:CDS |
| GAACTTGTTTCTGAGGTAAT+GGG | 0.408793 | 8_3:+10760472 | Msa1276190:CDS |
| AAGCAATGGGTCAAATGAAT+AGG | 0.409703 | 8_3:+10760386 | Msa1276190:CDS |
| TGCATTATCTTCTGTAAAGA+AGG | 0.419416 | 8_3:-10760421 | None:intergenic |
| GCAATTGATGATGCTTTAGA+AGG | 0.423361 | 8_3:+10760499 | Msa1276190:CDS |
| TACAATTAATCAACCACCTA+AGG | 0.446225 | 8_3:-10758949 | None:intergenic |
| AGCAAAGAACAGGGTTGCTC+AGG | 0.453290 | 8_3:+10760992 | Msa1276190:CDS |
| GTTGCTCAGGCCGAACCAAC+GGG | 0.456495 | 8_3:+10761005 | Msa1276190:CDS |
| AGGGGAGGAAACGTAGATAT+AGG | 0.458061 | 8_3:+10761428 | Msa1276190:three_prime_UTR |
| CGTTTCCTCCCCTAACAAAC+CGG | 0.475871 | 8_3:-10761418 | None:intergenic |
| GAATGCCAAACAAGGACAAA+TGG | 0.480489 | 8_3:+10759446 | Msa1276190:CDS |
| AAAGGAGTTACTAAAGCAAT+GGG | 0.498174 | 8_3:+10760373 | Msa1276190:CDS |
| ATGAACTATAATCCAAACTA+AGG | 0.500638 | 8_3:-10758973 | None:intergenic |
| GCAGAGGGTATGGTATGGTT+AGG | 0.502559 | 8_3:+10761450 | Msa1276190:three_prime_UTR |
| GCAGCGGTTGAGGTTGATGC+AGG | 0.505074 | 8_3:-10760963 | None:intergenic |
| AGTCTATTAGAGAAATTGAA+AGG | 0.508512 | 8_3:+10759370 | Msa1276190:CDS |
| GGAAACGTAGATATAGGCAG+AGG | 0.509205 | 8_3:+10761434 | Msa1276190:three_prime_UTR |
| TGAAAGGCAGAATGAGAAGA+TGG | 0.511267 | 8_3:+10760450 | Msa1276190:CDS |
| AGATAATGCAAGAGTTTGAA+AGG | 0.512294 | 8_3:+10760434 | Msa1276190:CDS |
| AAGCTTAAATCACAACTTCA+GGG | 0.512790 | 8_3:+10759831 | Msa1276190:CDS |
| GTTACATTTGCTGATCTGAC+CGG | 0.513466 | 8_3:+10761399 | Msa1276190:three_prime_UTR |
| GAAAGGAGTTACTAAAGCAA+TGG | 0.516989 | 8_3:+10760372 | Msa1276190:CDS |
| TTTAGAAGGTGATGAAGAAG+AGG | 0.518323 | 8_3:+10760513 | Msa1276190:CDS |
| GAACCAACGGGCAATGATGA+TGG | 0.518414 | 8_3:+10761017 | Msa1276190:CDS |
| GGTTGCTCAGGCCGAACCAA+CGG | 0.520072 | 8_3:+10761004 | Msa1276190:CDS |
| TGCTGTGAGGGTTATGGCCA+AGG | 0.523944 | 8_3:+10759770 | Msa1276190:CDS |
| GCGAGTTCTGATAAGATCCT+TGG | 0.525743 | 8_3:-10759787 | None:intergenic |
| GTCTATTAGAGAAATTGAAA+GGG | 0.532893 | 8_3:+10759371 | Msa1276190:CDS |
| CTTAAATCTACTCAAGCGAT+GGG | 0.543703 | 8_3:+10760340 | Msa1276190:CDS |
| AATCAGGTTCTTGATGAGAT+CGG | 0.543892 | 8_3:+10760556 | Msa1276190:CDS |
| CCACCATCATCATTGCCCGT+TGG | 0.548023 | 8_3:-10761020 | None:intergenic |
| GTAGATATAGGCAGAGGGTA+TGG | 0.552002 | 8_3:+10761440 | Msa1276190:three_prime_UTR |
| AATTTGTTAGGGTGCTGTGA+GGG | 0.568995 | 8_3:+10759758 | Msa1276190:intron |
| CTAAGGAAAATGTGATGCGT+AGG | 0.571602 | 8_3:+10761077 | Msa1276190:exon |
| ACTTAAATCTACTCAAGCGA+TGG | 0.571897 | 8_3:+10760339 | Msa1276190:CDS |
| AGACTAGGTTAGATAACCTA+AGG | 0.575086 | 8_3:+10761060 | Msa1276190:CDS |
| GAAGATGGAACTTGTTTCTG+AGG | 0.576457 | 8_3:+10760465 | Msa1276190:CDS |
| CAATTTGTTAGGGTGCTGTG+AGG | 0.590012 | 8_3:+10759757 | Msa1276190:intron |
| GTTCTTTGCTGCTGGCGCAG+CGG | 0.591986 | 8_3:-10760979 | None:intergenic |
| GGCAGTAGAAAGACTCCCGC+AGG | 0.599855 | 8_3:+10759093 | Msa1276190:CDS |
| TGATCTGACCGGTTTGTTAG+GGG | 0.602062 | 8_3:+10761410 | Msa1276190:three_prime_UTR |
| TGCGCCAGCAGCAAAGAACA+GGG | 0.604491 | 8_3:+10760983 | Msa1276190:CDS |
| GGAATTGCACAGTAGAGCAT+AGG | 0.604816 | 8_3:+10759040 | Msa1276190:five_prime_UTR |
| TATAGGCAGAGGGTATGGTA+TGG | 0.609581 | 8_3:+10761445 | Msa1276190:three_prime_UTR |
| TAAATCTACTCAAGCGATGG+GGG | 0.615627 | 8_3:+10760342 | Msa1276190:CDS |
| ATTAAGAAGAATGCCAAACA+AGG | 0.625704 | 8_3:+10759438 | Msa1276190:CDS |
| CCAACGGGCAATGATGATGG+TGG | 0.626681 | 8_3:+10761020 | Msa1276190:CDS |
| GAAACGTAGATATAGGCAGA+GGG | 0.628744 | 8_3:+10761435 | Msa1276190:three_prime_UTR |
| GAAATTGAAAGGGAAAGACA+AGG | 0.633295 | 8_3:+10759381 | Msa1276190:CDS |
| GGTATGGTATGGTTAGGTGA+AGG | 0.634683 | 8_3:+10761456 | Msa1276190:three_prime_UTR |
| TCTGACCGGTTTGTTAGGGG+AGG | 0.635845 | 8_3:+10761413 | Msa1276190:three_prime_UTR |
| AAATTGAAAGGGAAAGACAA+GGG | 0.643400 | 8_3:+10759382 | Msa1276190:CDS |
| TTAAATCTACTCAAGCGATG+GGG | 0.653699 | 8_3:+10760341 | Msa1276190:CDS |
| TAGATGATGATCTACAGACT+AGG | 0.660331 | 8_3:+10761045 | Msa1276190:CDS |
| CGGAATTGATATCAACTCTG+AGG | 0.660467 | 8_3:+10760576 | Msa1276190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACAATAATTTAATAC+TGG | + | chr8_3:10759209-10759228 | Msa1276190:intron | 10.0% |
| !! | AAAAACAATAATTTAATACT+GGG | + | chr8_3:10759210-10759229 | Msa1276190:intron | 10.0% |
| !! | TTACAAATTATAAATTAAAC+AGG | - | chr8_3:10760257-10760276 | None:intergenic | 10.0% |
| !!! | AATTTTCACTTTTAATCAAA+TGG | + | chr8_3:10759126-10759145 | Msa1276190:intron | 15.0% |
| !!! | ATTTTCACTTTTAATCAAAT+GGG | + | chr8_3:10759127-10759146 | Msa1276190:intron | 15.0% |
| !! | TTTGTAATTGATATATATCA+TGG | - | chr8_3:10761245-10761264 | None:intergenic | 15.0% |
| !!! | AAATGGGTAATTTTTAACTT+AGG | + | chr8_3:10758907-10758926 | Msa1276190:five_prime_UTR | 20.0% |
| !! | TTCCTTAAATAAAAAACCTT+AGG | + | chr8_3:10758933-10758952 | Msa1276190:five_prime_UTR | 20.0% |
| !!! | TTTTCACTTTTAATCAAATG+GGG | + | chr8_3:10759128-10759147 | Msa1276190:intron | 20.0% |
| !!! | ATTGTGGTTTTTAATATAGT+AGG | + | chr8_3:10759669-10759688 | Msa1276190:intron | 20.0% |
| !!! | TTGTGGTTTTTAATATAGTA+GGG | + | chr8_3:10759670-10759689 | Msa1276190:intron | 20.0% |
| !!! | TTTAAGTTGTTTATCCAAAA+AGG | - | chr8_3:10760617-10760636 | None:intergenic | 20.0% |
| !! | AATAAGCTAAAAACATCTTA+AGG | + | chr8_3:10760760-10760779 | Msa1276190:intron | 20.0% |
| !!! | ATATACGATCATTATTTTCA+TGG | - | chr8_3:10761129-10761148 | None:intergenic | 20.0% |
| !!! | TTTAGTCACATTTTATTTTC+AGG | + | chr8_3:10761164-10761183 | Msa1276190:three_prime_UTR | 20.0% |
| !!! | CACCTAAGGTTTTTTATTTA+AGG | - | chr8_3:10758938-10758957 | None:intergenic | 25.0% |
| ! | CTTAAATAAAAAACCTTAGG+TGG | + | chr8_3:10758936-10758955 | Msa1276190:five_prime_UTR | 25.0% |
| ! | GATTAATTGTAACCTTAGTT+TGG | + | chr8_3:10758961-10758980 | Msa1276190:five_prime_UTR | 25.0% |
| ! | ATGAACTATAATCCAAACTA+AGG | - | chr8_3:10758976-10758995 | None:intergenic | 25.0% |
| ! | AAAATTTGAAGAATTACCTG+CGG | - | chr8_3:10759112-10759131 | None:intergenic | 25.0% |
| !!! | TCTTATTTGCTTTTCTAGTT+TGG | + | chr8_3:10759238-10759257 | Msa1276190:intron | 25.0% |
| ! | GAAAAATTGTGACTTTGATT+AGG | + | chr8_3:10759260-10759279 | Msa1276190:intron | 25.0% |
| !!! | AACTGAGTTTTTTGGTTAAT+GGG | + | chr8_3:10759283-10759302 | Msa1276190:intron | 25.0% |
| ! | AGTCTATTAGAGAAATTGAA+AGG | + | chr8_3:10759370-10759389 | Msa1276190:CDS | 25.0% |
| ! | GTCTATTAGAGAAATTGAAA+GGG | + | chr8_3:10759371-10759390 | Msa1276190:CDS | 25.0% |
| ! | CTAAAAACACTATAATTGCA+GGG | - | chr8_3:10759572-10759591 | None:intergenic | 25.0% |
| !!! | CTGCAATTATAGTGTTTTTA+GGG | + | chr8_3:10759571-10759590 | Msa1276190:intron | 25.0% |
| ! | GTATGCAAGTATAGATTATT+TGG | + | chr8_3:10759599-10759618 | Msa1276190:intron | 25.0% |
| !!! | TGAGAAGTTTATTGCTTTTA+AGG | + | chr8_3:10759646-10759665 | Msa1276190:intron | 25.0% |
| !!! | TTTATTGCTTTTAAGGATTG+TGG | + | chr8_3:10759653-10759672 | Msa1276190:intron | 25.0% |
| !!! | AGTTTGGTTTCAATTTGTTA+GGG | + | chr8_3:10759747-10759766 | Msa1276190:intron | 25.0% |
| !! | TGTAAAACTTTTCAATCTGA+TGG | - | chr8_3:10759812-10759831 | None:intergenic | 25.0% |
| !!! | AATAATAGACTAGTCCTTTT+TGG | + | chr8_3:10760600-10760619 | Msa1276190:intron | 25.0% |
| !!! | CTTATTTTCATAAACTCTCT+AGG | - | chr8_3:10760746-10760765 | None:intergenic | 25.0% |
| !! | ACTAATTTGAGTTTATCTAC+TGG | - | chr8_3:10760841-10760860 | None:intergenic | 25.0% |
| ! | TCAAATTAGTCAATTCAAAC+AGG | + | chr8_3:10760851-10760870 | Msa1276190:intron | 25.0% |
| !!! | TCACATTTTATTTTCAGGTT+TGG | + | chr8_3:10761169-10761188 | Msa1276190:intron | 25.0% |
| ! | CTATCTTACTTATGTATGTA+TGG | + | chr8_3:10761194-10761213 | Msa1276190:intron | 25.0% |
| ! | AATGTTTGATGTGATAAAAG+AGG | - | chr8_3:10761298-10761317 | None:intergenic | 25.0% |
| ! | TACACAGATCTTATTAGAAT+TGG | + | chr8_3:10761377-10761396 | Msa1276190:intron | 25.0% |
| TACAATTAATCAACCACCTA+AGG | - | chr8_3:10758952-10758971 | None:intergenic | 30.0% | |
| ! | TTCAATATGAGTTTTCTGCT+CGG | + | chr8_3:10759072-10759091 | Msa1276190:exon | 30.0% |
| AAATTTGAAGAATTACCTGC+GGG | - | chr8_3:10759111-10759130 | None:intergenic | 30.0% | |
| !!! | TGATTAGGAACTGAGTTTTT+TGG | + | chr8_3:10759275-10759294 | Msa1276190:intron | 30.0% |
| !!! | GAACTGAGTTTTTTGGTTAA+TGG | + | chr8_3:10759282-10759301 | Msa1276190:intron | 30.0% |
| !! | TTTTGGTTAATGGGTAGTTT+TGG | + | chr8_3:10759292-10759311 | Msa1276190:intron | 30.0% |
| ! | TTTGTTAAACAGAGCTTTTG+AGG | + | chr8_3:10759325-10759344 | Msa1276190:intron | 30.0% |
| ! | TTGTTAAACAGAGCTTTTGA+GGG | + | chr8_3:10759326-10759345 | Msa1276190:intron | 30.0% |
| AAATTGAAAGGGAAAGACAA+GGG | + | chr8_3:10759382-10759401 | Msa1276190:CDS | 30.0% | |
| ATTAAGAAGAATGCCAAACA+AGG | + | chr8_3:10759438-10759457 | Msa1276190:CDS | 30.0% | |
| AAATACCATTTGTCCTTGTT+TGG | - | chr8_3:10759454-10759473 | None:intergenic | 30.0% | |
| CCTAAAAACACTATAATTGC+AGG | - | chr8_3:10759573-10759592 | None:intergenic | 30.0% | |
| ! | CCTGCAATTATAGTGTTTTT+AGG | + | chr8_3:10759570-10759589 | Msa1276190:intron | 30.0% |
| ! | GAGTTTGGTTTCAATTTGTT+AGG | + | chr8_3:10759746-10759765 | Msa1276190:intron | 30.0% |
| AAGCTTAAATCACAACTTCA+GGG | + | chr8_3:10759831-10759850 | Msa1276190:CDS | 30.0% | |
| AACTTATCTGCTAAAATCCT+AGG | - | chr8_3:10759951-10759970 | None:intergenic | 30.0% | |
| TTTCATGCTCTTTCATACTA+TGG | + | chr8_3:10760205-10760224 | Msa1276190:intron | 30.0% | |
| AAGTGTCTACAATTAATCTC+AGG | - | chr8_3:10760323-10760342 | None:intergenic | 30.0% | |
| AAAGGAGTTACTAAAGCAAT+GGG | + | chr8_3:10760373-10760392 | Msa1276190:CDS | 30.0% | |
| TGCATTATCTTCTGTAAAGA+AGG | - | chr8_3:10760424-10760443 | None:intergenic | 30.0% | |
| AGATAATGCAAGAGTTTGAA+AGG | + | chr8_3:10760434-10760453 | Msa1276190:CDS | 30.0% | |
| ACATCTTAAGGATATGTCAT+AGG | + | chr8_3:10760772-10760791 | Msa1276190:intron | 30.0% | |
| ACAACCTATGATAAATGCTA+GGG | - | chr8_3:10760898-10760917 | None:intergenic | 30.0% | |
| AACAACCTATGATAAATGCT+AGG | - | chr8_3:10760899-10760918 | None:intergenic | 30.0% | |
| !! | AGCTTTTGAGGGAGAATAAA+AGG | + | chr8_3:10759337-10759356 | Msa1276190:CDS | 35.0% |
| GAAATTGAAAGGGAAAGACA+AGG | + | chr8_3:10759381-10759400 | Msa1276190:CDS | 35.0% | |
| CCACTAGTAATGAAAGAAGA+AGG | - | chr8_3:10759486-10759505 | None:intergenic | 35.0% | |
| CCTTCTTCTTTCATTACTAG+TGG | + | chr8_3:10759483-10759502 | Msa1276190:intron | 35.0% | |
| !! | TAGGGTGTTGTTATTTGAAC+AGG | + | chr8_3:10759688-10759707 | Msa1276190:intron | 35.0% |
| GAACAGGTATGTCATATGTT+TGG | + | chr8_3:10759704-10759723 | Msa1276190:intron | 35.0% | |
| GTTTGAGTAGTTTCTGAGTT+TGG | + | chr8_3:10759731-10759750 | Msa1276190:intron | 35.0% | |
| CAAGCTTAAATCACAACTTC+AGG | + | chr8_3:10759830-10759849 | Msa1276190:CDS | 35.0% | |
| TTCATGCTTATTGTTCTCCT+AGG | + | chr8_3:10759931-10759950 | Msa1276190:intron | 35.0% | |
| !! | GGATTTTAGCAGATAAGTTG+AGG | + | chr8_3:10759952-10759971 | Msa1276190:intron | 35.0% |
| ACTTAAATCTACTCAAGCGA+TGG | + | chr8_3:10760339-10760358 | Msa1276190:CDS | 35.0% | |
| CTTAAATCTACTCAAGCGAT+GGG | + | chr8_3:10760340-10760359 | Msa1276190:CDS | 35.0% | |
| TTAAATCTACTCAAGCGATG+GGG | + | chr8_3:10760341-10760360 | Msa1276190:CDS | 35.0% | |
| GAAAGGAGTTACTAAAGCAA+TGG | + | chr8_3:10760372-10760391 | Msa1276190:CDS | 35.0% | |
| AAGCAATGGGTCAAATGAAT+AGG | + | chr8_3:10760386-10760405 | Msa1276190:CDS | 35.0% | |
| !! | GAACTTGTTTCTGAGGTAAT+GGG | + | chr8_3:10760472-10760491 | Msa1276190:CDS | 35.0% |
| !! | GCAATTGATGATGCTTTAGA+AGG | + | chr8_3:10760499-10760518 | Msa1276190:CDS | 35.0% |
| TTTAGAAGGTGATGAAGAAG+AGG | + | chr8_3:10760513-10760532 | Msa1276190:CDS | 35.0% | |
| GACAGAAGATCTTGTTAATC+AGG | + | chr8_3:10760540-10760559 | Msa1276190:CDS | 35.0% | |
| AATCAGGTTCTTGATGAGAT+CGG | + | chr8_3:10760556-10760575 | Msa1276190:CDS | 35.0% | |
| CAACCTATGATAAATGCTAG+GGG | - | chr8_3:10760897-10760916 | None:intergenic | 35.0% | |
| TAGATGATGATCTACAGACT+AGG | + | chr8_3:10761045-10761064 | Msa1276190:CDS | 35.0% | |
| AGACTAGGTTAGATAACCTA+AGG | + | chr8_3:10761060-10761079 | Msa1276190:CDS | 35.0% | |
| ATGTGATGCGTAGGAATATT+TGG | + | chr8_3:10761086-10761105 | Msa1276190:exon | 35.0% | |
| AGCGCTATCGCAAACAAAAT+TGG | + | chr8_3:10759019-10759038 | Msa1276190:five_prime_UTR | 40.0% | |
| GAATGCCAAACAAGGACAAA+TGG | + | chr8_3:10759446-10759465 | Msa1276190:CDS | 40.0% | |
| GGTATGTCATATGTTTGGTC+TGG | + | chr8_3:10759709-10759728 | Msa1276190:intron | 40.0% | |
| !! | AATTTGTTAGGGTGCTGTGA+GGG | + | chr8_3:10759758-10759777 | Msa1276190:intron | 40.0% |
| TACGGTATCCATGTCTCTAT+CGG | + | chr8_3:10760143-10760162 | Msa1276190:intron | 40.0% | |
| ! | AGCATGAAAGCATATACGCA+AGG | - | chr8_3:10760194-10760213 | None:intergenic | 40.0% |
| TAAATCTACTCAAGCGATGG+GGG | + | chr8_3:10760342-10760361 | Msa1276190:CDS | 40.0% | |
| TGAAAGGCAGAATGAGAAGA+TGG | + | chr8_3:10760450-10760469 | Msa1276190:CDS | 40.0% | |
| !! | GAAGATGGAACTTGTTTCTG+AGG | + | chr8_3:10760465-10760484 | Msa1276190:CDS | 40.0% |
| !! | GGAACTTGTTTCTGAGGTAA+TGG | + | chr8_3:10760471-10760490 | Msa1276190:CDS | 40.0% |
| CGGAATTGATATCAACTCTG+AGG | + | chr8_3:10760576-10760595 | Msa1276190:CDS | 40.0% | |
| GTTCCCCTAGCATTTATCAT+AGG | + | chr8_3:10760891-10760910 | Msa1276190:intron | 40.0% | |
| ! | CTACGCATCACATTTTCCTT+AGG | - | chr8_3:10761079-10761098 | None:intergenic | 40.0% |
| CTAAGGAAAATGTGATGCGT+AGG | + | chr8_3:10761077-10761096 | Msa1276190:exon | 40.0% | |
| ! | GTTACATTTGCTGATCTGAC+CGG | + | chr8_3:10761399-10761418 | Msa1276190:three_prime_UTR | 40.0% |
| GAAACGTAGATATAGGCAGA+GGG | + | chr8_3:10761435-10761454 | Msa1276190:three_prime_UTR | 40.0% | |
| GGAATTGCACAGTAGAGCAT+AGG | + | chr8_3:10759040-10759059 | Msa1276190:five_prime_UTR | 45.0% | |
| !! | CAATTTGTTAGGGTGCTGTG+AGG | + | chr8_3:10759757-10759776 | Msa1276190:intron | 45.0% |
| ! | GCGAGTTCTGATAAGATCCT+TGG | - | chr8_3:10759790-10759809 | None:intergenic | 45.0% |
| !! | GGGTGTTGCTTTGAGAATTC+AGG | + | chr8_3:10759851-10759870 | Msa1276190:CDS | 45.0% |
| ! | GCACTGACATTTCTGATCGA+AGG | + | chr8_3:10760020-10760039 | Msa1276190:intron | 45.0% |
| ! | CAACGTGTAAGTGTCGTGTA+CGG | + | chr8_3:10760125-10760144 | Msa1276190:intron | 45.0% |
| ! | ATCATCATTGCCCGTTGGTT+CGG | - | chr8_3:10761018-10761037 | None:intergenic | 45.0% |
| !! | CTGATCTGACCGGTTTGTTA+GGG | + | chr8_3:10761409-10761428 | Msa1276190:three_prime_UTR | 45.0% |
| !! | TGATCTGACCGGTTTGTTAG+GGG | + | chr8_3:10761410-10761429 | Msa1276190:three_prime_UTR | 45.0% |
| AGGGGAGGAAACGTAGATAT+AGG | + | chr8_3:10761428-10761447 | Msa1276190:three_prime_UTR | 45.0% | |
| GGAAACGTAGATATAGGCAG+AGG | + | chr8_3:10761434-10761453 | Msa1276190:three_prime_UTR | 45.0% | |
| GTAGATATAGGCAGAGGGTA+TGG | + | chr8_3:10761440-10761459 | Msa1276190:three_prime_UTR | 45.0% | |
| ! | TATAGGCAGAGGGTATGGTA+TGG | + | chr8_3:10761445-10761464 | Msa1276190:three_prime_UTR | 45.0% |
| GGTATGGTATGGTTAGGTGA+AGG | + | chr8_3:10761456-10761475 | Msa1276190:three_prime_UTR | 45.0% | |
| !! | TTAGGGTGCTGTGAGGGTTA+TGG | + | chr8_3:10759764-10759783 | Msa1276190:intron | 50.0% |
| TGACAAGTGTCCGACATGTG+TGG | + | chr8_3:10760045-10760064 | Msa1276190:intron | 50.0% | |
| GACAAGTGTCCGACATGTGT+GGG | + | chr8_3:10760046-10760065 | Msa1276190:intron | 50.0% | |
| TGTCCGACATGTGTGGGTAT+TGG | + | chr8_3:10760052-10760071 | Msa1276190:intron | 50.0% | |
| GTCCGACATGTGTGGGTATT+GGG | + | chr8_3:10760053-10760072 | Msa1276190:intron | 50.0% | |
| TGCCCAATACCCACACATGT+CGG | - | chr8_3:10760058-10760077 | None:intergenic | 50.0% | |
| ! | ATGACGCACCGATAGAGACA+TGG | - | chr8_3:10760154-10760173 | None:intergenic | 50.0% |
| AGCAAAGAACAGGGTTGCTC+AGG | + | chr8_3:10760992-10761011 | Msa1276190:CDS | 50.0% | |
| GAACCAACGGGCAATGATGA+TGG | + | chr8_3:10761017-10761036 | Msa1276190:CDS | 50.0% | |
| !! | GCTGATCTGACCGGTTTGTT+AGG | + | chr8_3:10761408-10761427 | Msa1276190:three_prime_UTR | 50.0% |
| CGTTTCCTCCCCTAACAAAC+CGG | - | chr8_3:10761421-10761440 | None:intergenic | 50.0% | |
| ! | GCAGAGGGTATGGTATGGTT+AGG | + | chr8_3:10761450-10761469 | Msa1276190:three_prime_UTR | 50.0% |
| TGCTGTGAGGGTTATGGCCA+AGG | + | chr8_3:10759770-10759789 | Msa1276190:CDS | 55.0% | |
| TGCGCCAGCAGCAAAGAACA+GGG | + | chr8_3:10760983-10761002 | Msa1276190:CDS | 55.0% | |
| GCAACCCTGTTCTTTGCTGC+TGG | - | chr8_3:10760990-10761009 | None:intergenic | 55.0% | |
| CCACCATCATCATTGCCCGT+TGG | - | chr8_3:10761023-10761042 | None:intergenic | 55.0% | |
| !! | CCAACGGGCAATGATGATGG+TGG | + | chr8_3:10761020-10761039 | Msa1276190:CDS | 55.0% |
| !! | TCTGACCGGTTTGTTAGGGG+AGG | + | chr8_3:10761413-10761432 | Msa1276190:three_prime_UTR | 55.0% |
| GGCAGTAGAAAGACTCCCGC+AGG | + | chr8_3:10759093-10759112 | Msa1276190:CDS | 60.0% | |
| GCGATGGGGGACGCTATGAA+AGG | + | chr8_3:10760355-10760374 | Msa1276190:CDS | 60.0% | |
| !! | GCAGCGGTTGAGGTTGATGC+AGG | - | chr8_3:10760966-10760985 | None:intergenic | 60.0% |
| GTTCTTTGCTGCTGGCGCAG+CGG | - | chr8_3:10760982-10761001 | None:intergenic | 60.0% | |
| CTGCGCCAGCAGCAAAGAAC+AGG | + | chr8_3:10760982-10761001 | Msa1276190:CDS | 60.0% | |
| GGTTGCTCAGGCCGAACCAA+CGG | + | chr8_3:10761004-10761023 | Msa1276190:CDS | 60.0% | |
| GTTGCTCAGGCCGAACCAAC+GGG | + | chr8_3:10761005-10761024 | Msa1276190:CDS | 60.0% | |
| TGCTGCTGGCGCAGCGGTTG+AGG | - | chr8_3:10760976-10760995 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 10758893 | 10761506 | 10758893 | ID=Msa1276190;Name=Msa1276190 |
| chr8_3 | mRNA | 10758893 | 10761506 | 10758893 | ID=Msa1276190-mRNA-1;Parent=Msa1276190;Name=Msa1276190-mRNA-1;_AED=0.09;_eAED=0.09;_QI=185|1|1|1|0.8|0.66|6|217|224 |
| chr8_3 | exon | 10758893 | 10759114 | 10758893 | ID=Msa1276190-mRNA-1:exon:4416;Parent=Msa1276190-mRNA-1 |
| chr8_3 | exon | 10759337 | 10759467 | 10759337 | ID=Msa1276190-mRNA-1:exon:4417;Parent=Msa1276190-mRNA-1 |
| chr8_3 | exon | 10759768 | 10759872 | 10759768 | ID=Msa1276190-mRNA-1:exon:4418;Parent=Msa1276190-mRNA-1 |
| chr8_3 | exon | 10760337 | 10760597 | 10760337 | ID=Msa1276190-mRNA-1:exon:4419;Parent=Msa1276190-mRNA-1 |
| chr8_3 | exon | 10760951 | 10761185 | 10760951 | ID=Msa1276190-mRNA-1:exon:4420;Parent=Msa1276190-mRNA-1 |
| chr8_3 | exon | 10761384 | 10761506 | 10761384 | ID=Msa1276190-mRNA-1:exon:4421;Parent=Msa1276190-mRNA-1 |
| chr8_3 | five_prime_UTR | 10758893 | 10759077 | 10758893 | ID=Msa1276190-mRNA-1:five_prime_utr;Parent=Msa1276190-mRNA-1 |
| chr8_3 | CDS | 10759078 | 10759114 | 10759078 | ID=Msa1276190-mRNA-1:cds;Parent=Msa1276190-mRNA-1 |
| chr8_3 | CDS | 10759337 | 10759467 | 10759337 | ID=Msa1276190-mRNA-1:cds;Parent=Msa1276190-mRNA-1 |
| chr8_3 | CDS | 10759768 | 10759872 | 10759768 | ID=Msa1276190-mRNA-1:cds;Parent=Msa1276190-mRNA-1 |
| chr8_3 | CDS | 10760337 | 10760597 | 10760337 | ID=Msa1276190-mRNA-1:cds;Parent=Msa1276190-mRNA-1 |
| chr8_3 | CDS | 10760951 | 10761091 | 10760951 | ID=Msa1276190-mRNA-1:cds;Parent=Msa1276190-mRNA-1 |
| chr8_3 | three_prime_UTR | 10761092 | 10761185 | 10761092 | ID=Msa1276190-mRNA-1:three_prime_utr;Parent=Msa1276190-mRNA-1 |
| chr8_3 | three_prime_UTR | 10761384 | 10761506 | 10761384 | ID=Msa1276190-mRNA-1:three_prime_utr;Parent=Msa1276190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
