AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0920610


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0920610 MtrunA17_Chr6g0477001 88.791 339 10 2 1 311 1 339 0.0 613
Msa0920610 MtrunA17_Chr2g0305371 43.363 226 94 4 28 225 255 474 6.92e-53 181
Msa0920610 MtrunA17_Chr1g0201621 36.574 216 105 5 42 225 11 226 1.79e-31 122
Msa0920610 MtrunA17_Chr1g0201311 36.574 216 105 5 42 225 11 226 2.81e-31 122
Msa0920610 MtrunA17_Chr3g0125251 33.188 229 119 6 28 224 1240 1466 3.67e-27 112
Msa0920610 MtrunA17_Chr5g0403241 34.211 152 79 2 84 214 1325 1476 2.08e-16 80.1
Msa0920610 MtrunA17_Chr4g0075321 34.959 123 69 1 84 195 882 1004 2.75e-15 76.6
Msa0920610 MtrunA17_Chr8g0373821 33.103 145 88 1 84 219 359 503 7.07e-15 75.1
Msa0920610 MtrunA17_Chr5g0399801 31.618 136 71 3 86 199 891 1026 5.08e-12 66.6
Msa0920610 MtrunA17_Chr7g0255181 25.676 148 96 1 86 219 519 666 1.55e-11 65.1
Msa0920610 MtrunA17_Chr3g0080761 28.472 144 69 2 86 199 461 600 4.42e-11 63.5
Msa0920610 MtrunA17_Chr4g0003511 29.412 136 74 2 86 199 854 989 6.27e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0920610 AT2G44150.1 57.300 363 101 9 1 309 1 363 2.13e-119 348
Msa0920610 AT3G59960.1 50.151 331 115 8 1 283 1 329 2.42e-83 254
Msa0920610 AT3G59960.3 57.915 259 78 4 1 230 1 257 1.78e-81 248
Msa0920610 AT3G59960.2 57.915 259 78 4 1 230 1 257 1.78e-81 248
Msa0920610 AT3G59960.4 57.915 259 78 4 1 230 1 257 1.78e-81 248
Msa0920610 AT4G30860.1 40.637 251 112 5 10 229 227 471 3.57e-53 181
Msa0920610 AT1G76710.2 35.556 225 113 4 33 225 7 231 4.07e-31 122
Msa0920610 AT1G76710.1 35.556 225 113 4 33 225 7 231 4.07e-31 122
Msa0920610 AT1G76710.4 35.556 225 113 4 33 225 7 231 4.38e-31 122
Msa0920610 AT1G76710.3 35.556 225 113 4 33 225 7 231 4.39e-31 122
Msa0920610 AT1G77300.1 34.722 216 109 5 43 226 955 1170 1.14e-27 114
Msa0920610 AT1G77300.2 34.722 216 109 5 43 226 955 1170 1.31e-27 113
Msa0920610 AT2G35160.5 37.719 114 67 1 86 199 586 695 7.28e-15 75.5
Msa0920610 AT2G35160.2 37.719 114 67 1 86 199 622 731 7.98e-15 75.5
Msa0920610 AT2G35160.3 37.719 114 67 1 86 199 622 731 7.98e-15 75.5
Msa0920610 AT2G35160.1 37.719 114 67 1 86 199 622 731 7.98e-15 75.5
Msa0920610 AT2G35160.4 37.719 114 67 1 86 199 622 731 7.98e-15 75.5
Msa0920610 AT2G23740.3 33.566 143 82 2 84 214 1197 1338 1.75e-14 74.7
Msa0920610 AT2G23740.6 33.566 143 82 2 84 214 1197 1338 1.75e-14 74.7
Msa0920610 AT2G23740.2 33.566 143 82 2 84 214 1197 1338 1.75e-14 74.7
Msa0920610 AT2G23740.1 33.566 143 82 2 84 214 1190 1331 1.83e-14 74.7
Msa0920610 AT2G22740.2 28.718 195 77 7 90 222 595 789 1.20e-11 65.9
Msa0920610 AT2G22740.1 28.718 195 77 7 90 222 595 789 1.20e-11 65.9
Msa0920610 AT2G23740.4 34.454 119 65 2 84 190 1197 1314 3.86e-11 64.3
Msa0920610 AT2G23740.5 34.454 119 65 2 84 190 1197 1314 3.86e-11 64.3
Msa0920610 AT3G03750.2 33.043 115 65 2 90 192 170 284 5.41e-11 63.2

Find 93 sgRNAs with CRISPR-Local

Find 534 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAGAAACTCCCACTTTAT+TGG 0.164337 6_2:+55921484 None:intergenic
ATGAAATATGATGAAAATTT+AGG 0.174856 6_2:-55930361 Msa0920610:five_prime_UTR
TCATAATTTAGTGATGAATT+AGG 0.211043 6_2:-55921570 Msa0920610:three_prime_UTR
AAAGGATACTGCGCTTTATA+TGG 0.211128 6_2:+55929377 None:intergenic
AGTTATGAAAATGCGGTTAT+TGG 0.226607 6_2:-55930207 Msa0920610:five_prime_UTR
ACTCTGTTGGACAGTCTTAA+AGG 0.230195 6_2:-55930070 Msa0920610:five_prime_UTR
ACAGATTTGGGATTATTAAA+TGG 0.239891 6_2:-55922910 Msa0920610:intron
ACCTGATATGCCACTAATTT+AGG 0.249497 6_2:+55927423 None:intergenic
CATAGCAGGTTTGTTCAATT+TGG 0.254145 6_2:-55927513 Msa0920610:intron
TGACTTTACAATTTGCTTAG+AGG 0.261492 6_2:-55930153 Msa0920610:five_prime_UTR
CATTTCTGCATCTCAGTATT+CGG 0.269242 6_2:+55928144 None:intergenic
TTCAATGCCCATCATGAAAA+AGG 0.289802 6_2:-55929813 Msa0920610:intron
GCCTAAATTAGTGGCATATC+AGG 0.297012 6_2:-55927424 Msa0920610:intron
CAAATTGTTCTTCATGCTAT+AGG 0.312779 6_2:-55929878 Msa0920610:five_prime_UTR
CATTACTCATGTTCAATTCA+TGG 0.336525 6_2:-55921517 Msa0920610:three_prime_UTR
CTTCTGTCTAGCTGTTCTTC+AGG 0.341155 6_2:-55928832 Msa0920610:CDS
CATAATTTAGTGATGAATTA+GGG 0.347283 6_2:-55921569 Msa0920610:three_prime_UTR
CAGTATTCGGGCAGCAACTA+TGG 0.356191 6_2:+55928157 None:intergenic
GTGATAGATGCGACAAATAA+AGG 0.361111 6_2:-55928201 Msa0920610:CDS
TTGAACATCTTTCTGCTGTT+AGG 0.371907 6_2:-55930039 Msa0920610:five_prime_UTR
ATGACATGTCAAAAGAAGAT+TGG 0.390357 6_2:-55922530 Msa0920610:CDS
TGTTCAGTGTAGGCGTAAGC+TGG 0.410254 6_2:-55927463 Msa0920610:CDS
GAGATTGTGATGCAACTCTT+AGG 0.417801 6_2:-55922499 Msa0920610:exon
ATGTGAAATCAATCGAGATA+TGG 0.429587 6_2:-55928223 Msa0920610:CDS
AAACATGCGAACAGAGGCTT+TGG 0.435383 6_2:-55928281 Msa0920610:CDS
CAGGTGAAGGAAGTGAAAAT+TGG 0.446695 6_2:-55921876 Msa0920610:three_prime_UTR
CAGGATTTGCATAGAATACA+AGG 0.447678 6_2:+55921693 None:intergenic
TATGAAAATGTGAGATAAGA+TGG 0.447912 6_2:-55930180 Msa0920610:five_prime_UTR
CGAATACTGAGATGCAGAAA+TGG 0.448001 6_2:-55928143 Msa0920610:intron
TAGGAAGAGAATACCTTTGA+AGG 0.448746 6_2:-55929859 Msa0920610:five_prime_UTR
ACCTACCAAGCCTAAATTAG+TGG 0.455934 6_2:-55927433 Msa0920610:CDS
GGCAAGAGAAAGAGTGATGA+TGG 0.457143 6_2:-55929114 Msa0920610:CDS
TTTGGACAGGTTTATCAGAA+TGG 0.457254 6_2:-55923282 Msa0920610:intron
TGACATGTCAAAAGAAGATT+GGG 0.459343 6_2:-55922529 Msa0920610:CDS
TCTGTATTGTTCTTCTGTAC+AGG 0.461562 6_2:-55930295 Msa0920610:five_prime_UTR
GACTTTCTTGCTTCCTTCAA+AGG 0.464506 6_2:+55929846 None:intergenic
TGAATTGATGATACAACAAA+TGG 0.465484 6_2:+55921639 None:intergenic
TAGAATACAAGGATTTCTTC+CGG 0.469711 6_2:+55921704 None:intergenic
TTCTTCTGAGTTCAGAGTAC+CGG 0.470217 6_2:-55921723 Msa0920610:three_prime_UTR
TAGACTGAGAAATGTGGATC+TGG 0.471672 6_2:-55928476 Msa0920610:CDS
AGATATATATCTCACTAAGA+AGG 0.474007 6_2:-55929136 Msa0920610:CDS
TATGAAAATGCGGTTATTGG+AGG 0.477112 6_2:-55930204 Msa0920610:five_prime_UTR
AAGGATACTGCGCTTTATAT+GGG 0.477321 6_2:+55929378 None:intergenic
ATTTCTGCATCTCAGTATTC+GGG 0.478549 6_2:+55928145 None:intergenic
GACGGTTACTCTAAAATGAA+TGG 0.479160 6_2:+55930100 None:intergenic
ATTTCTCTTGTTAGAGTGAA+GGG 0.481857 6_2:-55930463 Msa0920610:five_prime_UTR
ACGAAGCTGATGAACAATCT+TGG 0.488292 6_2:-55929457 Msa0920610:CDS
TGTTCTTCAGGCTGCAAATG+TGG 0.494922 6_2:-55928820 Msa0920610:CDS
CAGAATGGAGGCCTGCAGAC+TGG 0.507925 6_2:-55923267 Msa0920610:intron
ATATGCCACTAATTTAGGCT+TGG 0.510433 6_2:+55927428 None:intergenic
GAGGTTTGTATCCAATAAAG+TGG 0.515048 6_2:-55921495 Msa0920610:three_prime_UTR
AATTGAGTAAGCAATTTGAA+TGG 0.521092 6_2:+55923101 None:intergenic
CCTGATTGTACTGTAAAATG+AGG 0.527130 6_2:-55921674 Msa0920610:three_prime_UTR
GTTCTTCAGGCTGCAAATGT+GGG 0.537608 6_2:-55928819 Msa0920610:CDS
GATATATATCTCACTAAGAA+GGG 0.539250 6_2:-55929135 Msa0920610:CDS
AATTTCTCTTGTTAGAGTGA+AGG 0.541362 6_2:-55930464 Msa0920610:five_prime_UTR
TTGTGATGCAACTCTTAGGC+AGG 0.545066 6_2:-55922495 Msa0920610:exon
GTAATTGAATATGTCGGAGA+AGG 0.545438 6_2:-55928416 Msa0920610:intron
AAACAAGCTTACCAGTCTGC+AGG 0.545839 6_2:+55923256 None:intergenic
TTTCAGATCATGTTCGAGGA+TGG 0.551741 6_2:-55922567 Msa0920610:intron
TATAAATAGTTATGAAAATG+CGG 0.555074 6_2:-55930214 Msa0920610:five_prime_UTR
GCAGATGAAGATATAAAGCA+TGG 0.559769 6_2:-55928446 Msa0920610:CDS
TAAAGTGGGAGTTTCTCTGC+TGG 0.567932 6_2:-55921480 Msa0920610:three_prime_UTR
GCCACTAATTTAGGCTTGGT+AGG 0.568833 6_2:+55927432 None:intergenic
GTTATTATGATAAAACAACT+TGG 0.570866 6_2:-55923067 Msa0920610:CDS
GAAGCAAGAAAGTCTTGTTG+TGG 0.583896 6_2:-55929837 Msa0920610:five_prime_UTR
TCTGATTCTACTGCTGTATG+TGG 0.586087 6_2:-55929069 Msa0920610:CDS
GAGTTTGTAATTGAATATGT+CGG 0.587237 6_2:-55928422 Msa0920610:CDS
AAGAACAATACAGATCCTAC+AGG 0.587745 6_2:+55930304 None:intergenic
GTTCAGTGTAGGCGTAAGCT+GGG 0.595432 6_2:-55927462 Msa0920610:CDS
CAGATGAAGATATAAAGCAT+GGG 0.595965 6_2:-55928445 Msa0920610:CDS
GGACAGGTTTATCAGAATGG+AGG 0.603637 6_2:-55923279 Msa0920610:intron
ACTGTGGTGCTGTTCAGTGT+AGG 0.609909 6_2:-55927473 Msa0920610:CDS
TGATACAAACTAAATCCTGT+AGG 0.610053 6_2:-55930319 Msa0920610:five_prime_UTR
CTTTGGAATATGAAAGATCG+TGG 0.610205 6_2:-55928264 Msa0920610:CDS
TATCAAACAGAATATGAAGA+GGG 0.612264 6_2:-55921811 Msa0920610:three_prime_UTR
TCCAACAGAGTCTAAAATGA+CGG 0.622514 6_2:+55930082 None:intergenic
TTTGGAATATGAAAGATCGT+GGG 0.627929 6_2:-55928263 Msa0920610:CDS
ATGATAAAACATGCGAACAG+AGG 0.637191 6_2:-55928287 Msa0920610:CDS
TTATCAAACAGAATATGAAG+AGG 0.643212 6_2:-55921812 Msa0920610:three_prime_UTR
TAAAACAACTTGGAAATGTG+AGG 0.644254 6_2:-55923057 Msa0920610:intron
GTGGTAGAGATTGCCACTGT+GGG 0.651295 6_2:-55929050 Msa0920610:intron
AGGTTTGTATCCAATAAAGT+GGG 0.656688 6_2:-55921494 Msa0920610:three_prime_UTR
GAAATGTGGATCTGGAATTG+TGG 0.670067 6_2:-55928468 Msa0920610:CDS
TACTCATGTTCAATTCATGG+AGG 0.675823 6_2:-55921514 Msa0920610:three_prime_UTR
AGATGAAGATATAAAGCATG+GGG 0.676792 6_2:-55928444 Msa0920610:CDS
TGAGTATTCTCGAAAACACA+AGG 0.689756 6_2:-55922882 Msa0920610:intron
TGTGGTAGAGATTGCCACTG+TGG 0.693149 6_2:-55929051 Msa0920610:CDS
TTGGAATATGAAAGATCGTG+GGG 0.693630 6_2:-55928262 Msa0920610:CDS
GCAGATCAAGATTGCCACTG+TGG 0.694777 6_2:-55927489 Msa0920610:CDS
ACTTAGTTACTTACCCACAG+TGG 0.732787 6_2:+55929037 None:intergenic
TACACTGAACAGCACCACAG+TGG 0.733510 6_2:+55927475 None:intergenic
TGCTTGTAGACTGAGAAATG+TGG 0.734376 6_2:-55928482 Msa0920610:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAACATAAATAAAATATA+CGG + chr6_2:55922219-55922238 None:intergenic 10.0%
!!! ATTAATTTCATCTTTTTAAT+AGG + chr6_2:55923207-55923226 None:intergenic 10.0%
!! AATTATAACATATGAAATTA+AGG + chr6_2:55928996-55929015 None:intergenic 10.0%
!!! GCAAAATAATAAATTTTTAT+TGG - chr6_2:55929255-55929274 Msa0920610:intron 10.0%
!! ATGAAATATGATGAAAATTT+AGG - chr6_2:55921606-55921625 Msa0920610:three_prime_UTR 15.0%
!! TATAAATAGTTATGAAAATG+CGG - chr6_2:55921753-55921772 Msa0920610:three_prime_UTR 15.0%
!!! TTTTAAGTAAAACTAATTCA+AGG + chr6_2:55922065-55922084 None:intergenic 15.0%
!! TAAAAAGATGAAATTAATCA+AGG - chr6_2:55923209-55923228 Msa0920610:intron 15.0%
!!! ATTTTAGAGAAACTTTATTT+AGG - chr6_2:55923399-55923418 Msa0920610:intron 15.0%
!! TATCAAATATAAAAATCTGT+TGG - chr6_2:55925332-55925351 Msa0920610:intron 15.0%
!! GAAACAAATCATATTATATA+TGG - chr6_2:55925696-55925715 Msa0920610:intron 15.0%
!! AATCAAAACTTAAATTTCTA+TGG + chr6_2:55925758-55925777 None:intergenic 15.0%
!!! AATATCTTATATTATCGTTT+TGG + chr6_2:55925894-55925913 None:intergenic 15.0%
!!! TTTATTTTAAAAGTTAAGCT+AGG - chr6_2:55926036-55926055 Msa0920610:intron 15.0%
!! ATAATACAAATTTGAAGATA+GGG - chr6_2:55926542-55926561 Msa0920610:intron 15.0%
!!! AAATAATCTCTAGAATTTAA+AGG + chr6_2:55929322-55929341 None:intergenic 15.0%
!!! TTTTAGGTTTATAGTATTAA+GGG + chr6_2:55929761-55929780 None:intergenic 15.0%
!!! ATTTTAGGTTTATAGTATTA+AGG + chr6_2:55929762-55929781 None:intergenic 15.0%
!! CATAATTGTTAGATAAAAAG+TGG - chr6_2:55921719-55921738 Msa0920610:three_prime_UTR 20.0%
!!! TGGTCTTTTAAAATTTAAGA+TGG - chr6_2:55922282-55922301 Msa0920610:intron 20.0%
!!! ACCTTTTTAGATTTTACTTT+TGG - chr6_2:55922416-55922435 Msa0920610:intron 20.0%
!! ACCAAAAGTAAAATCTAAAA+AGG + chr6_2:55922420-55922439 None:intergenic 20.0%
!!! ATTTCATCTTTTTAATAGGA+CGG + chr6_2:55923203-55923222 None:intergenic 20.0%
!!! AAGTAGGTCTAAAATAAAAT+AGG + chr6_2:55923623-55923642 None:intergenic 20.0%
!!! TTCTAATTGTTTTATTCACA+TGG - chr6_2:55923853-55923872 Msa0920610:intron 20.0%
!! AATCATCTATCAAATAATGT+CGG + chr6_2:55923905-55923924 None:intergenic 20.0%
!!! TATTTGATAGATGATTAGTT+AGG - chr6_2:55923909-55923928 Msa0920610:intron 20.0%
!! TTAAATAAGTTAATCCAAAC+AGG - chr6_2:55924336-55924355 Msa0920610:intron 20.0%
!! TTGATATTATTGAAAAGACA+TGG + chr6_2:55924608-55924627 None:intergenic 20.0%
!!! TTTTCATTAGACTATTGATT+AGG - chr6_2:55924698-55924717 Msa0920610:intron 20.0%
!!! TTTCATTAGACTATTGATTA+GGG - chr6_2:55924699-55924718 Msa0920610:intron 20.0%
!!! GAACATATATTTTAGAGTAT+AGG + chr6_2:55924859-55924878 None:intergenic 20.0%
!!! ATCAATTCCTTTATTTTTTC+CGG - chr6_2:55925103-55925122 Msa0920610:intron 20.0%
!!! TAAGAATTTTAAGAATTCCA+AGG + chr6_2:55925189-55925208 None:intergenic 20.0%
!!! ATTAAGCACATTTTCAATTA+GGG + chr6_2:55925234-55925253 None:intergenic 20.0%
!! TAATTGAAAATGTGCTTAAT+GGG - chr6_2:55925234-55925253 Msa0920610:intron 20.0%
!!! TAGCGTTAATTTTTGATAAT+TGG - chr6_2:55925273-55925292 Msa0920610:intron 20.0%
!! CATAAAAACTTATTCTTAGA+TGG - chr6_2:55925722-55925741 Msa0920610:intron 20.0%
!! ATGTGATAAAAGTTGTATTA+AGG - chr6_2:55926255-55926274 Msa0920610:intron 20.0%
!! GATAATACAAATTTGAAGAT+AGG - chr6_2:55926541-55926560 Msa0920610:intron 20.0%
!! AAATAATGTGAATGATATGT+TGG - chr6_2:55926618-55926637 Msa0920610:intron 20.0%
!!! ATCTGAAGTAAAAGTAAATA+AGG - chr6_2:55926700-55926719 Msa0920610:intron 20.0%
!! ATTAAATAACCGTTAAAGAT+CGG + chr6_2:55926729-55926748 None:intergenic 20.0%
!!! ACTGGTTTGAAAATATATAA+AGG - chr6_2:55928453-55928472 Msa0920610:CDS 20.0%
!! ATGTATAATTATCTACGTTT+CGG - chr6_2:55928641-55928660 Msa0920610:intron 20.0%
!! GTTATTATGATAAAACAACT+TGG - chr6_2:55928900-55928919 Msa0920610:intron 20.0%
!!! TAACTGCTTTTTAAAATTAG+TGG + chr6_2:55929217-55929236 None:intergenic 20.0%
!! TCATAATTTAGTGATGAATT+AGG - chr6_2:55930397-55930416 Msa0920610:five_prime_UTR 20.0%
!! CATAATTTAGTGATGAATTA+GGG - chr6_2:55930398-55930417 Msa0920610:five_prime_UTR 20.0%
! TATGAAAATGTGAGATAAGA+TGG - chr6_2:55921787-55921806 Msa0920610:three_prime_UTR 25.0%
!!! ATTTTACTTTTGGTTTGCTA+AGG - chr6_2:55922426-55922445 Msa0920610:intron 25.0%
!!! TTTTACTTTTGGTTTGCTAA+GGG - chr6_2:55922427-55922446 Msa0920610:intron 25.0%
! AACTAAAAACAACTGAAGAT+TGG + chr6_2:55922718-55922737 None:intergenic 25.0%
! AGATATATATCTCACTAAGA+AGG - chr6_2:55922831-55922850 Msa0920610:intron 25.0%
! GATATATATCTCACTAAGAA+GGG - chr6_2:55922832-55922851 Msa0920610:intron 25.0%
! ATTCATAGTTAAAATGGAGT+AGG + chr6_2:55923004-55923023 None:intergenic 25.0%
! ATGTTCGTGATTCATAAAAT+AGG + chr6_2:55923030-55923049 None:intergenic 25.0%
! TTGAATCACACACATAAAAT+AGG + chr6_2:55923055-55923074 None:intergenic 25.0%
!! ATTTTATGTGTGTGATTCAA+TGG - chr6_2:55923055-55923074 Msa0920610:intron 25.0%
!! TTTTATGTGTGTGATTCAAT+GGG - chr6_2:55923056-55923075 Msa0920610:intron 25.0%
! AAAAATAATCCTGATTCAGA+AGG + chr6_2:55923240-55923259 None:intergenic 25.0%
!! TTCTGAATCAGGATTATTTT+TGG - chr6_2:55923239-55923258 Msa0920610:intron 25.0%
!!! TCTGAATCAGGATTATTTTT+GGG - chr6_2:55923240-55923259 Msa0920610:intron 25.0%
!! ATGATTTTCTTATTGCAAGT+TGG - chr6_2:55923355-55923374 Msa0920610:intron 25.0%
! GAGTTTGTAATTGAATATGT+CGG - chr6_2:55923545-55923564 Msa0920610:intron 25.0%
! TAACAACAACAATCAAAAGT+AGG + chr6_2:55923639-55923658 None:intergenic 25.0%
! TTCTTTGATTACACTCTTTA+AGG - chr6_2:55924079-55924098 Msa0920610:intron 25.0%
! TTAATCTATTTACCCAAACA+AGG + chr6_2:55924105-55924124 None:intergenic 25.0%
!! CTTAATTTTATAAGCTCTCT+AGG + chr6_2:55924228-55924247 None:intergenic 25.0%
! TTAGAGAGAACTTACAAAAA+TGG + chr6_2:55924280-55924299 None:intergenic 25.0%
! CTAAAATATATGTTCATAGC+TGG - chr6_2:55924864-55924883 Msa0920610:intron 25.0%
!!! ATATTGATTGTGCATTGATT+TGG - chr6_2:55924977-55924996 Msa0920610:intron 25.0%
!! TGATTTGGAAAATCCTTATT+TGG - chr6_2:55924992-55925011 Msa0920610:intron 25.0%
! TATTTCAAAATCCATCTTTC+CGG - chr6_2:55925056-55925075 Msa0920610:intron 25.0%
!! TTAAGCACATTTTCAATTAG+GGG + chr6_2:55925233-55925252 None:intergenic 25.0%
!! CATTAAGCACATTTTCAATT+AGG + chr6_2:55925235-55925254 None:intergenic 25.0%
! CTAATTGAAAATGTGCTTAA+TGG - chr6_2:55925233-55925252 Msa0920610:intron 25.0%
! AATCATATATCGTCTACTTT+CGG + chr6_2:55925306-55925325 None:intergenic 25.0%
! TTATTAACGAAAATGATGCT+AGG - chr6_2:55925431-55925450 Msa0920610:intron 25.0%
! TTCAACATTGATCAAAACTT+CGG + chr6_2:55925569-55925588 None:intergenic 25.0%
! GACTCGATCTTAATTAAAAA+GGG - chr6_2:55925674-55925693 Msa0920610:intron 25.0%
!!! GTTTTGATTAAAACATGTTG+AGG - chr6_2:55925769-55925788 Msa0920610:intron 25.0%
!!! AATAGTATGTTTTAGCTTGA+GGG + chr6_2:55925974-55925993 None:intergenic 25.0%
!!! AAATAGTATGTTTTAGCTTG+AGG + chr6_2:55925975-55925994 None:intergenic 25.0%
! TCAAGCTAAAACATACTATT+TGG - chr6_2:55925974-55925993 Msa0920610:intron 25.0%
! CAAGCTAAAACATACTATTT+GGG - chr6_2:55925975-55925994 Msa0920610:intron 25.0%
!!! AATTGATTTTGAGATCTTAG+AGG - chr6_2:55926181-55926200 Msa0920610:intron 25.0%
! TCTACAAAAGAATGATAAGA+GGG - chr6_2:55926513-55926532 Msa0920610:intron 25.0%
! TGTTATTATGACAAAAGACA+GGG - chr6_2:55926644-55926663 Msa0920610:intron 25.0%
! GGAGTTATATATTGCTTATA+AGG - chr6_2:55926944-55926963 Msa0920610:intron 25.0%
! TTTATATGGTAGATTTATGG+CGG + chr6_2:55927634-55927653 None:intergenic 25.0%
! GCATTTATATGGTAGATTTA+TGG + chr6_2:55927637-55927656 None:intergenic 25.0%
! ATAACCTAACTATGAAGAAT+TGG - chr6_2:55927780-55927799 Msa0920610:intron 25.0%
! TAACCTAACTATGAAGAATT+GGG - chr6_2:55927781-55927800 Msa0920610:intron 25.0%
! TCCATTGAATTCAAAATCTA+GGG - chr6_2:55927916-55927935 Msa0920610:intron 25.0%
! TTCTAATAAAGCATGATTGT+TGG - chr6_2:55928366-55928385 Msa0920610:intron 25.0%
!!! AGGCTTTATTTCTTAATATC+AGG - chr6_2:55928394-55928413 Msa0920610:intron 25.0%
! ATAGATATCAGGATAATTAC+TGG - chr6_2:55928435-55928454 Msa0920610:CDS 25.0%
!!! TTCTGTTGTATTGATTTTAC+AGG - chr6_2:55928825-55928844 Msa0920610:CDS 25.0%
! AATTGAGTAAGCAATTTGAA+TGG + chr6_2:55928869-55928888 None:intergenic 25.0%
! ATAGTATCATAAACTTCACA+AGG + chr6_2:55928973-55928992 None:intergenic 25.0%
!! ATTTTACAATGCAACAGATT+TGG - chr6_2:55929044-55929063 Msa0920610:intron 25.0%
!! TTTTACAATGCAACAGATTT+GGG - chr6_2:55929045-55929064 Msa0920610:intron 25.0%
!! ACAGATTTGGGATTATTAAA+TGG - chr6_2:55929057-55929076 Msa0920610:CDS 25.0%
! CTAATTTACAATGACAATGT+AGG + chr6_2:55929134-55929153 None:intergenic 25.0%
!!! CTTTTTAAAATTAGTGGTAC+TGG + chr6_2:55929211-55929230 None:intergenic 25.0%
! TTAAAAAGCAGTTATGAAAG+TGG - chr6_2:55929223-55929242 Msa0920610:intron 25.0%
! ATAAATCCTTCCTTTCTTAT+CGG + chr6_2:55929609-55929628 None:intergenic 25.0%
! GAAAGGTTATATTATACCTA+TGG + chr6_2:55929739-55929758 None:intergenic 25.0%
! TAGCTTATGAAAATAGCTTA+TGG - chr6_2:55929874-55929893 Msa0920610:five_prime_UTR 25.0%
! AATAAGCTGAAAACAATGTA+AGG + chr6_2:55929905-55929924 None:intergenic 25.0%
!! TTTATTGCTATTCGCAAAAA+TGG - chr6_2:55930029-55930048 Msa0920610:five_prime_UTR 25.0%
!! TTATTGCTATTCGCAAAAAT+GGG - chr6_2:55930030-55930049 Msa0920610:five_prime_UTR 25.0%
! TTATCAAACAGAATATGAAG+AGG - chr6_2:55930155-55930174 Msa0920610:five_prime_UTR 25.0%
! TATCAAACAGAATATGAAGA+GGG - chr6_2:55930156-55930175 Msa0920610:five_prime_UTR 25.0%
!! TGAATTGATGATACAACAAA+TGG + chr6_2:55930331-55930350 None:intergenic 25.0%
!!! TTAGACCATTTTTTAGCATA+AGG - chr6_2:55930371-55930390 Msa0920610:five_prime_UTR 25.0%
AATTTCTCTTGTTAGAGTGA+AGG - chr6_2:55921503-55921522 Msa0920610:three_prime_UTR 30.0%
ATTTCTCTTGTTAGAGTGAA+GGG - chr6_2:55921504-55921523 Msa0920610:three_prime_UTR 30.0%
TGATACAAACTAAATCCTGT+AGG - chr6_2:55921648-55921667 Msa0920610:three_prime_UTR 30.0%
AGTTATGAAAATGCGGTTAT+TGG - chr6_2:55921760-55921779 Msa0920610:three_prime_UTR 30.0%
! TGACTTTACAATTTGCTTAG+AGG - chr6_2:55921814-55921833 Msa0920610:three_prime_UTR 30.0%
!!! TGCTTAGAGGTTTTTAGTTA+TGG - chr6_2:55921827-55921846 Msa0920610:three_prime_UTR 30.0%
CAAATTGTTCTTCATGCTAT+AGG - chr6_2:55922089-55922108 Msa0920610:intron 30.0%
!! GAAACAACCTTTTTCATGAT+GGG + chr6_2:55922164-55922183 None:intergenic 30.0%
!! TGAAACAACCTTTTTCATGA+TGG + chr6_2:55922165-55922184 None:intergenic 30.0%
AATATACGGAACTCAATAGA+AGG + chr6_2:55922205-55922224 None:intergenic 30.0%
TCACTATATGTATGTGCTTA+TGG - chr6_2:55922359-55922378 Msa0920610:intron 30.0%
TCTGATAAACAGAGAATCAA+AGG + chr6_2:55922458-55922477 None:intergenic 30.0%
TTCCAGATTCGATTAAAAAC+AGG - chr6_2:55922553-55922572 Msa0920610:CDS 30.0%
AATCTGACCAACACTAATAA+AGG + chr6_2:55922611-55922630 None:intergenic 30.0%
TAAAGACACTCATAAAGCAA+GGG + chr6_2:55922673-55922692 None:intergenic 30.0%
ATAAAGACACTCATAAAGCA+AGG + chr6_2:55922674-55922693 None:intergenic 30.0%
GGCTAAATACAGAAAAAATG+AGG + chr6_2:55922742-55922761 None:intergenic 30.0%
AGGCAGATTCATAGTTAAAA+TGG + chr6_2:55923010-55923029 None:intergenic 30.0%
ACAACTCATTATGTCAAATG+TGG + chr6_2:55923458-55923477 None:intergenic 30.0%
CAGATGAAGATATAAAGCAT+GGG - chr6_2:55923522-55923541 Msa0920610:intron 30.0%
AGATGAAGATATAAAGCATG+GGG - chr6_2:55923523-55923542 Msa0920610:intron 30.0%
! TTTGGAATATGAAAGATCGT+GGG - chr6_2:55923704-55923723 Msa0920610:intron 30.0%
ATGTGAAATCAATCGAGATA+TGG - chr6_2:55923744-55923763 Msa0920610:intron 30.0%
CCATCTATTATCCTAAAGAT+GGG + chr6_2:55923979-55923998 None:intergenic 30.0%
ACCATCTATTATCCTAAAGA+TGG + chr6_2:55923980-55923999 None:intergenic 30.0%
ATAGATGGTGAAACTAGAAT+CGG - chr6_2:55923991-55924010 Msa0920610:intron 30.0%
!! ATCAAAGAAAGTACTCATAC+TGG + chr6_2:55924068-55924087 None:intergenic 30.0%
TACTTATATGATGAGCACTT+AGG + chr6_2:55924142-55924161 None:intergenic 30.0%
TTAGAAGAGAGTTCAACTTA+TGG + chr6_2:55924362-55924381 None:intergenic 30.0%
ACTCTCTTCTAATGAAAGTT+TGG - chr6_2:55924370-55924389 Msa0920610:intron 30.0%
AACAAATCATTCAACATAGG+AGG + chr6_2:55924730-55924749 None:intergenic 30.0%
CTGAACAAATCATTCAACAT+AGG + chr6_2:55924733-55924752 None:intergenic 30.0%
! AATCCTTATTTGGATTGTGA+AGG - chr6_2:55925002-55925021 Msa0920610:intron 30.0%
! ATCCTTATTTGGATTGTGAA+GGG - chr6_2:55925003-55925022 Msa0920610:intron 30.0%
TAACTCTCCGGAAAAAATAA+AGG + chr6_2:55925113-55925132 None:intergenic 30.0%
AATAGTCACTAATAACTCTC+CGG + chr6_2:55925125-55925144 None:intergenic 30.0%
ATAAAAATCTGTTGGACTTG+CGG - chr6_2:55925340-55925359 Msa0920610:intron 30.0%
TTTAGTCCTTTAGATATACC+TGG - chr6_2:55925598-55925617 Msa0920610:intron 30.0%
CGACTCGATCTTAATTAAAA+AGG - chr6_2:55925673-55925692 Msa0920610:intron 30.0%
TTAAAACATGTTGAGGTTGT+AGG - chr6_2:55925776-55925795 Msa0920610:intron 30.0%
TAAAACATGTTGAGGTTGTA+GGG - chr6_2:55925777-55925796 Msa0920610:intron 30.0%
!!! ATAGTATGTTTTAGCTTGAG+GGG + chr6_2:55925973-55925992 None:intergenic 30.0%
!! TCTTTCTGAAGTTATATCCT+TGG + chr6_2:55926402-55926421 None:intergenic 30.0%
AAGGATATAACTTCAGAAAG+AGG - chr6_2:55926401-55926420 Msa0920610:intron 30.0%
AGGATATAACTTCAGAAAGA+GGG - chr6_2:55926402-55926421 Msa0920610:intron 30.0%
GTCTACAAAAGAATGATAAG+AGG - chr6_2:55926512-55926531 Msa0920610:intron 30.0%
! GTGTTATTATGACAAAAGAC+AGG - chr6_2:55926643-55926662 Msa0920610:intron 30.0%
ATAAGGAAACCGATCTTTAA+CGG - chr6_2:55926717-55926736 Msa0920610:intron 30.0%
! GATTGGTAATTTGACAATCT+AGG + chr6_2:55926878-55926897 None:intergenic 30.0%
! ACGATTTGTCATTTGAAATG+CGG + chr6_2:55927054-55927073 None:intergenic 30.0%
GTCATATCTCTATTCAATGT+GGG + chr6_2:55927121-55927140 None:intergenic 30.0%
! GTTTGGTAATTTGACAATCT+AGG + chr6_2:55927143-55927162 None:intergenic 30.0%
!!! TGTCATTTTGGTTCAAATAC+CGG + chr6_2:55927322-55927341 None:intergenic 30.0%
TAAGTAGTGCTTATAAGGTT+TGG + chr6_2:55927417-55927436 None:intergenic 30.0%
TTATATGGTAGATTTATGGC+GGG + chr6_2:55927633-55927652 None:intergenic 30.0%
TCATAGTTAGGTTATTAGCA+GGG + chr6_2:55927775-55927794 None:intergenic 30.0%
TTCATAGTTAGGTTATTAGC+AGG + chr6_2:55927776-55927795 None:intergenic 30.0%
AACCTAACTATGAAGAATTG+GGG - chr6_2:55927782-55927801 Msa0920610:intron 30.0%
CTCCATTGAATTCAAAATCT+AGG - chr6_2:55927915-55927934 Msa0920610:intron 30.0%
! ACCCTAGATTTTGAATTCAA+TGG + chr6_2:55927920-55927939 None:intergenic 30.0%
! AAGCATGATTGTTGGATTTT+AGG - chr6_2:55928374-55928393 Msa0920610:intron 30.0%
CTTAATATCAGGATGATTAC+TGG - chr6_2:55928405-55928424 Msa0920610:intron 30.0%
! CTGGTTTGAAAATAGATATC+AGG - chr6_2:55928424-55928443 Msa0920610:CDS 30.0%
TGTAGAAGACAACAAAAAGA+AGG + chr6_2:55928788-55928807 None:intergenic 30.0%
! TTGATTTTACAGGTAGTTCT+CGG - chr6_2:55928835-55928854 Msa0920610:CDS 30.0%
TAAAACAACTTGGAAATGTG+AGG - chr6_2:55928910-55928929 Msa0920610:intron 30.0%
ATGACATGTCAAAAGAAGAT+TGG - chr6_2:55929437-55929456 Msa0920610:CDS 30.0%
TGACATGTCAAAAGAAGATT+GGG - chr6_2:55929438-55929457 Msa0920610:CDS 30.0%
ATGCAAAAGAAATACTCACA+TGG + chr6_2:55929506-55929525 None:intergenic 30.0%
! TTTCTTTTGCATCTATCTGT+AGG - chr6_2:55929514-55929533 Msa0920610:intron 30.0%
TCAAATAAGCCAATTGAAAC+AGG + chr6_2:55929548-55929567 None:intergenic 30.0%
GGTTTATAGTATTAAGGGAA+AGG + chr6_2:55929756-55929775 None:intergenic 30.0%
! CTCTCATATGTAGCAATTTT+AGG + chr6_2:55929777-55929796 None:intergenic 30.0%
CTAAAATTGCTACATATGAG+AGG - chr6_2:55929775-55929794 Msa0920610:intron 30.0%
! ATAAATAGTTAGCCTATGCT+TGG + chr6_2:55930014-55930033 None:intergenic 30.0%
! CTAATTATTGTGTTGTTCAG+AGG - chr6_2:55930066-55930085 Msa0920610:five_prime_UTR 30.0%
TAGAATACAAGGATTTCTTC+CGG + chr6_2:55930266-55930285 None:intergenic 30.0%
GAGTTCCTTATGCTAAAAAA+TGG + chr6_2:55930379-55930398 None:intergenic 30.0%
CATTACTCATGTTCAATTCA+TGG - chr6_2:55930450-55930469 Msa0920610:five_prime_UTR 30.0%
AGGTTTGTATCCAATAAAGT+GGG - chr6_2:55930473-55930492 Msa0920610:five_prime_UTR 30.0%
AAGAACAATACAGATCCTAC+AGG + chr6_2:55921666-55921685 None:intergenic 35.0%
TCTGTATTGTTCTTCTGTAC+AGG - chr6_2:55921672-55921691 Msa0920610:three_prime_UTR 35.0%
TATGAAAATGCGGTTATTGG+AGG - chr6_2:55921763-55921782 Msa0920610:three_prime_UTR 35.0%
!! GACGGTTACTCTAAAATGAA+TGG + chr6_2:55921870-55921889 None:intergenic 35.0%
! TCCAACAGAGTCTAAAATGA+CGG + chr6_2:55921888-55921907 None:intergenic 35.0%
TTGAACATCTTTCTGCTGTT+AGG - chr6_2:55921928-55921947 Msa0920610:intron 35.0%
TAGGAAGAGAATACCTTTGA+AGG - chr6_2:55922108-55922127 Msa0920610:intron 35.0%
TTCAATGCCCATCATGAAAA+AGG - chr6_2:55922154-55922173 Msa0920610:intron 35.0%
ACTTAACAGAATACAACAGC+AGG + chr6_2:55922262-55922281 None:intergenic 35.0%
GCTGTTGTATTCTGTTAAGT+TGG - chr6_2:55922262-55922281 Msa0920610:intron 35.0%
TCTCAAGAAATACTGTACTC+TGG - chr6_2:55922309-55922328 Msa0920610:intron 35.0%
TGCTTATGGCAATTTCTATC+AGG - chr6_2:55922373-55922392 Msa0920610:intron 35.0%
!!! GTCCTGTTTTTAATCGAATC+TGG + chr6_2:55922558-55922577 None:intergenic 35.0%
AAGGATACTGCGCTTTATAT+GGG + chr6_2:55922592-55922611 None:intergenic 35.0%
AAAGGATACTGCGCTTTATA+TGG + chr6_2:55922593-55922612 None:intergenic 35.0%
GCAGTATCCTTTATTAGTGT+TGG - chr6_2:55922601-55922620 Msa0920610:intron 35.0%
AACAGACAAACTGTGTAACA+GGG + chr6_2:55922763-55922782 None:intergenic 35.0%
AAACAGACAAACTGTGTAAC+AGG + chr6_2:55922764-55922783 None:intergenic 35.0%
! GCTTTACACTTTTCATGTGT+TGG - chr6_2:55922957-55922976 Msa0920610:intron 35.0%
AAGGTATAACCTTCTGAATC+AGG - chr6_2:55923228-55923247 Msa0920610:intron 35.0%
GCAGATGAAGATATAAAGCA+TGG - chr6_2:55923521-55923540 Msa0920610:intron 35.0%
GTAATTGAATATGTCGGAGA+AGG - chr6_2:55923551-55923570 Msa0920610:intron 35.0%
ATCGATAACTGTGTAGAAAG+AGG + chr6_2:55923662-55923681 None:intergenic 35.0%
ATGATAAAACATGCGAACAG+AGG - chr6_2:55923680-55923699 Msa0920610:intron 35.0%
!! CTTTGGAATATGAAAGATCG+TGG - chr6_2:55923703-55923722 Msa0920610:intron 35.0%
TTGGAATATGAAAGATCGTG+GGG - chr6_2:55923705-55923724 Msa0920610:intron 35.0%
GTGATAGATGCGACAAATAA+AGG - chr6_2:55923766-55923785 Msa0920610:intron 35.0%
ATTTCTGCATCTCAGTATTC+GGG + chr6_2:55923825-55923844 None:intergenic 35.0%
CATTTCTGCATCTCAGTATT+CGG + chr6_2:55923826-55923845 None:intergenic 35.0%
! CTTTCTTGTTTCCCATCTTT+AGG - chr6_2:55923965-55923984 Msa0920610:intron 35.0%
!! CCCATCTTTAGGATAATAGA+TGG - chr6_2:55923976-55923995 Msa0920610:intron 35.0%
TGCAAGTCGTGATATAAAGA+AGG - chr6_2:55924020-55924039 Msa0920610:intron 35.0%
GCAAGTCGTGATATAAAGAA+GGG - chr6_2:55924021-55924040 Msa0920610:intron 35.0%
!! TCTAATGAAAGTTTGGTGTC+TGG - chr6_2:55924377-55924396 Msa0920610:intron 35.0%
! GGTGGATTCTAAGTTTCTAA+CGG - chr6_2:55924431-55924450 Msa0920610:intron 35.0%
! CATAGCAGGTTTGTTCAATT+TGG - chr6_2:55924454-55924473 Msa0920610:intron 35.0%
ATATGCCACTAATTTAGGCT+TGG + chr6_2:55924542-55924561 None:intergenic 35.0%
ACCTGATATGCCACTAATTT+AGG + chr6_2:55924547-55924566 None:intergenic 35.0%
TTATTTGGATTGTGAAGGGA+GGG - chr6_2:55925007-55925026 Msa0920610:intron 35.0%
TGCAAAACACAATCACATTC+CGG + chr6_2:55925078-55925097 None:intergenic 35.0%
TTTCCTCCAGGTATATCTAA+AGG + chr6_2:55925607-55925626 None:intergenic 35.0%
TTAGATATACCTGGAGGAAA+AGG - chr6_2:55925607-55925626 Msa0920610:intron 35.0%
TTTCCTCCAACTATACCTTA+AGG + chr6_2:55925804-55925823 None:intergenic 35.0%
TAAGGTATAGTTGGAGGAAA+AGG - chr6_2:55925804-55925823 Msa0920610:intron 35.0%
GGGACTATTAGGGTATAATA+TGG + chr6_2:55925952-55925971 None:intergenic 35.0%
!!! TAGTATGTTTTAGCTTGAGG+GGG + chr6_2:55925972-55925991 None:intergenic 35.0%
AACTGAAGCTATGAGACAAT+TGG - chr6_2:55926074-55926093 Msa0920610:intron 35.0%
ACTGAAGCTATGAGACAATT+GGG - chr6_2:55926075-55926094 Msa0920610:intron 35.0%
TAAATTCCAGCTGAAATAGC+TGG - chr6_2:55926099-55926118 Msa0920610:intron 35.0%
! TTAAATCCAGCTATTTCAGC+TGG + chr6_2:55926108-55926127 None:intergenic 35.0%
CTTGAAATAGCTGAAATAGC+TGG - chr6_2:55926134-55926153 Msa0920610:intron 35.0%
TCAATTTATGCTCGACCATA+AGG - chr6_2:55926341-55926360 Msa0920610:intron 35.0%
ACACTTGTCTCAAATCCTTA+TGG + chr6_2:55926273-55926292 None:intergenic 35.0%
! ATAAGGATTTGAGACAAGTG+TGG - chr6_2:55926358-55926377 Msa0920610:intron 35.0%
! CCACGATATTTTATACTCAC+TGG + chr6_2:55926448-55926467 None:intergenic 35.0%
CCAGTGAGTATAAAATATCG+TGG - chr6_2:55926445-55926464 Msa0920610:intron 35.0%
! TTTGAAATGCGGACTAATGT+GGG + chr6_2:55926797-55926816 None:intergenic 35.0%
! ATTTGAAATGCGGACTAATG+TGG + chr6_2:55926798-55926817 None:intergenic 35.0%
CTCCTATCTCTATTTGATGT+GGG + chr6_2:55926928-55926947 None:intergenic 35.0%
ACTCCTATCTCTATTTGATG+TGG + chr6_2:55926929-55926948 None:intergenic 35.0%
!! CTTAAGTTTTTGAGCCTTCA+AGG - chr6_2:55926973-55926992 Msa0920610:intron 35.0%
! TTTGAAATGCGGACTAATGT+GGG + chr6_2:55926797-55926816 None:intergenic 35.0%
! ATTTGAAATGCGGACTAATG+TGG + chr6_2:55926798-55926817 None:intergenic 35.0%
GGTCATATCTCTATTCAATG+TGG + chr6_2:55927122-55927141 None:intergenic 35.0%
GTCCTATCTCTATATGATGT+GGG + chr6_2:55927193-55927212 None:intergenic 35.0%
AGTCCTATCTCTATATGATG+TGG + chr6_2:55927194-55927213 None:intergenic 35.0%
GGACTTAGATTGTGCTTATA+AGG - chr6_2:55927209-55927228 Msa0920610:intron 35.0%
!! CTTAAGTTTTTGAGCCTTCA+AGG - chr6_2:55926973-55926992 Msa0920610:intron 35.0%
TAAATGGAAATGTCGACCTT+TGG + chr6_2:55927264-55927283 None:intergenic 35.0%
TTCTTGAGTCTTAGTAACAC+CGG - chr6_2:55927300-55927319 Msa0920610:intron 35.0%
ACAACGACCTACTTAGAATT+TGG - chr6_2:55927341-55927360 Msa0920610:intron 35.0%
CAACGACCTACTTAGAATTT+GGG - chr6_2:55927342-55927361 Msa0920610:intron 35.0%
CTACTTAGAATTTGGGCTTA+GGG - chr6_2:55927349-55927368 Msa0920610:intron 35.0%
! CTTTAGATGCTGGATTTTTG+TGG + chr6_2:55927385-55927404 None:intergenic 35.0%
CTTATAAGCACTACTTATGC+CGG - chr6_2:55927420-55927439 Msa0920610:intron 35.0%
CCAATGTTATCGAAGATGTT+GGG - chr6_2:55927597-55927616 Msa0920610:intron 35.0%
TATCGAAGATGTTGGGATTA+TGG - chr6_2:55927604-55927623 Msa0920610:intron 35.0%
ACCATATAAATGCAGTGTTG+TGG - chr6_2:55927644-55927663 Msa0920610:intron 35.0%
CCATATAAATGCAGTGTTGT+GGG - chr6_2:55927645-55927664 Msa0920610:intron 35.0%
ACCTAACTATGAAGAATTGG+GGG - chr6_2:55927783-55927802 Msa0920610:intron 35.0%
TCCTAATAACCTGCGTTATT+AGG - chr6_2:55927867-55927886 Msa0920610:intron 35.0%
ACCTAATAACGCAGGTTATT+AGG + chr6_2:55927871-55927890 None:intergenic 35.0%
TAACCTGCGTTATTAGGTAA+TGG - chr6_2:55927873-55927892 Msa0920610:intron 35.0%
TGGAGATATAAAATCACGCA+TGG + chr6_2:55927900-55927919 None:intergenic 35.0%
GAATGATCTTAAGATAGCTC+AGG - chr6_2:55927964-55927983 Msa0920610:intron 35.0%
! TCATGTAGAAAGCGTAGTAA+AGG - chr6_2:55928067-55928086 Msa0920610:intron 35.0%
AGGTCATGAGTTAGTTACAA+GGG + chr6_2:55928181-55928200 None:intergenic 35.0%
TTCAAGACTCTCTAAACACT+TGG - chr6_2:55928337-55928356 Msa0920610:intron 35.0%
AACAGTCATTCCTTTCAGAA+AGG + chr6_2:55928534-55928553 None:intergenic 35.0%
TTTGGACAGGTTTATCAGAA+TGG - chr6_2:55928685-55928704 Msa0920610:intron 35.0%
! TGATTTTACAGGTAGTTCTC+GGG - chr6_2:55928836-55928855 Msa0920610:CDS 35.0%
TGAGTATTCTCGAAAACACA+AGG - chr6_2:55929085-55929104 Msa0920610:CDS 35.0%
TATTCTCGAAAACACAAGGT+CGG - chr6_2:55929089-55929108 Msa0920610:CDS 35.0%
!! TTAGTCTGCTTTTGACACTT+TGG - chr6_2:55929340-55929359 Msa0920610:intron 35.0%
!!! ACTTTTTCAGATCATGTTCG+AGG - chr6_2:55929396-55929415 Msa0920610:CDS 35.0%
TAGGATTAACTTAACGCCAT+AGG - chr6_2:55929720-55929739 Msa0920610:intron 35.0%
!! GCTTATTTTCATAAGCTCTC+CGG - chr6_2:55929918-55929937 Msa0920610:five_prime_UTR 35.0%
!! CTTATTTTCATAAGCTCTCC+GGG - chr6_2:55929919-55929938 Msa0920610:five_prime_UTR 35.0%
! GATGTTTTCATAAGCTATCC+CGG + chr6_2:55929940-55929959 None:intergenic 35.0%
GAACAATTTGGAGAGACATT+TGG + chr6_2:55929966-55929985 None:intergenic 35.0%
TGTTACATGTTACCAAGCAT+AGG - chr6_2:55929999-55930018 Msa0920610:five_prime_UTR 35.0%
CAGGATTTGCATAGAATACA+AGG + chr6_2:55930277-55930296 None:intergenic 35.0%
! CCTCATTTTACAGTACAATC+AGG + chr6_2:55930296-55930315 None:intergenic 35.0%
CCTGATTGTACTGTAAAATG+AGG - chr6_2:55930293-55930312 Msa0920610:five_prime_UTR 35.0%
TACTCATGTTCAATTCATGG+AGG - chr6_2:55930453-55930472 Msa0920610:five_prime_UTR 35.0%
GAGGTTTGTATCCAATAAAG+TGG - chr6_2:55930472-55930491 Msa0920610:five_prime_UTR 35.0%
!! ACCGTCATTTTAGACTCTGT+TGG - chr6_2:55921884-55921903 Msa0920610:intron 40.0%
ACTCTGTTGGACAGTCTTAA+AGG - chr6_2:55921897-55921916 Msa0920610:intron 40.0%
GACTTTCTTGCTTCCTTCAA+AGG + chr6_2:55922124-55922143 None:intergenic 40.0%
!! GAAGCAAGAAAGTCTTGTTG+TGG - chr6_2:55922130-55922149 Msa0920610:intron 40.0%
!! TACTGTACTCTGGTTCTGAT+AGG - chr6_2:55922319-55922338 Msa0920610:intron 40.0%
ACGAAGCTGATGAACAATCT+TGG - chr6_2:55922510-55922529 Msa0920610:exon 40.0%
AAGGGCGATACTGTAAACAT+CGG + chr6_2:55922655-55922674 None:intergenic 40.0%
TCTGATTCTACTGCTGTATG+TGG - chr6_2:55922898-55922917 Msa0920610:CDS 40.0%
ACTTAGTTACTTACCCACAG+TGG + chr6_2:55922933-55922952 None:intergenic 40.0%
TGTGTGTGATTCAATGGGAA+TGG - chr6_2:55923061-55923080 Msa0920610:CDS 40.0%
GTGTGTGATTCAATGGGAAT+GGG - chr6_2:55923062-55923081 Msa0920610:CDS 40.0%
TGCTTGTAGACTGAGAAATG+TGG - chr6_2:55923485-55923504 Msa0920610:intron 40.0%
TAGACTGAGAAATGTGGATC+TGG - chr6_2:55923491-55923510 Msa0920610:intron 40.0%
! GAAATGTGGATCTGGAATTG+TGG - chr6_2:55923499-55923518 Msa0920610:intron 40.0%
CGAATACTGAGATGCAGAAA+TGG - chr6_2:55923824-55923843 Msa0920610:intron 40.0%
!! ACACTCTTTAAGGCCTTGTT+TGG - chr6_2:55924089-55924108 Msa0920610:intron 40.0%
!! CACTCTTTAAGGCCTTGTTT+GGG - chr6_2:55924090-55924109 Msa0920610:intron 40.0%
AGTTCAACTTATGGCCTGTT+TGG + chr6_2:55924353-55924372 None:intergenic 40.0%
GTATGACTCTGTTGTAGTGA+TGG - chr6_2:55924410-55924429 Msa0920610:intron 40.0%
TAAGTTTCTAACGGCATAGC+AGG - chr6_2:55924440-55924459 Msa0920610:intron 40.0%
ACCTACCAAGCCTAAATTAG+TGG - chr6_2:55924534-55924553 Msa0920610:intron 40.0%
GCCTAAATTAGTGGCATATC+AGG - chr6_2:55924543-55924562 Msa0920610:intron 40.0%
TTGTTCAGTATAGTCGACGA+TGG - chr6_2:55924745-55924764 Msa0920610:intron 40.0%
CTCCCTTCACAATCCAAATA+AGG + chr6_2:55925008-55925027 None:intergenic 40.0%
CTTATTTGGATTGTGAAGGG+AGG - chr6_2:55925006-55925025 Msa0920610:intron 40.0%
ACAATCACATTCCGGAAAGA+TGG + chr6_2:55925070-55925089 None:intergenic 40.0%
ATTTGTGTTGCCGTTACGTA+CGG - chr6_2:55925142-55925161 Msa0920610:intron 40.0%
CTCATGTTCACATGCTCAAA+AGG + chr6_2:55925463-55925482 None:intergenic 40.0%
AGTCCTTTAGATATACCTGG+AGG - chr6_2:55925601-55925620 Msa0920610:intron 40.0%
! TATAGTCTTCCTTTTCCTCC+AGG + chr6_2:55925619-55925638 None:intergenic 40.0%
TAGGGTCCTTAAGGTATAGT+TGG - chr6_2:55925795-55925814 Msa0920610:intron 40.0%
TGGGAAAATGATGAAGCTAG+AGG - chr6_2:55925994-55926013 Msa0920610:intron 40.0%
CTATTGCCGTAAATGCAGTT+GGG + chr6_2:55926207-55926226 None:intergenic 40.0%
CAACTGCATTTACGGCAATA+GGG - chr6_2:55926206-55926225 Msa0920610:intron 40.0%
AACTGCATTTACGGCAATAG+GGG - chr6_2:55926207-55926226 Msa0920610:intron 40.0%
! TTTGAGACAAGTGTTGCAAG+AGG - chr6_2:55926279-55926298 Msa0920610:intron 40.0%
TCTCTCTCAAGTTCTTTCCT+TGG + chr6_2:55926313-55926332 None:intergenic 40.0%
AAGGAAAGAACTTGAGAGAG+AGG - chr6_2:55926312-55926331 Msa0920610:intron 40.0%
AGGAAAGAACTTGAGAGAGA+GGG - chr6_2:55926313-55926332 Msa0920610:intron 40.0%
AAGATAGGGTTTAGTCGTGT+AGG - chr6_2:55926556-55926575 Msa0920610:intron 40.0%
TGTAGGCACAAAGGAAGAAA+AGG - chr6_2:55926573-55926592 Msa0920610:intron 40.0%
GTAGGCACAAAGGAAGAAAA+GGG - chr6_2:55926574-55926593 Msa0920610:intron 40.0%
ACTTGTCGAGATCTCTTTCA+TGG - chr6_2:55926769-55926788 Msa0920610:intron 40.0%
! GAATGAAGAAGTGTGTTGAG+AGG - chr6_2:55926830-55926849 Msa0920610:intron 40.0%
AGCCCACATCAAATAGAGAT+AGG - chr6_2:55926923-55926942 Msa0920610:intron 40.0%
AGGTCGTATATGTCGATCTT+TGG + chr6_2:55926999-55927018 None:intergenic 40.0%
! CTAATGTGGGTGCCATAAAA+GGG + chr6_2:55927030-55927049 None:intergenic 40.0%
! ACTAATGTGGGTGCCATAAA+AGG + chr6_2:55927031-55927050 None:intergenic 40.0%
TGGGTATCTCTATTCGATGT+GGG + chr6_2:55927102-55927121 None:intergenic 40.0%
TCGACATTTCCATTTATCGC+TGG - chr6_2:55927268-55927287 Msa0920610:intron 40.0%
!!! AGTAGGTCGTTGTGTCATTT+TGG + chr6_2:55927334-55927353 None:intergenic 40.0%
CCTAAGCCCAAATTCTAAGT+AGG + chr6_2:55927351-55927370 None:intergenic 40.0%
CCTACTTAGAATTTGGGCTT+AGG - chr6_2:55927348-55927367 Msa0920610:intron 40.0%
GACATTCTCACTTTAGATGC+TGG + chr6_2:55927395-55927414 None:intergenic 40.0%
CGGCATAAGTAGTGCTTATA+AGG + chr6_2:55927422-55927441 None:intergenic 40.0%
GCCAATGTTATCGAAGATGT+TGG - chr6_2:55927596-55927615 Msa0920610:intron 40.0%
CCCAACATCTTCGATAACAT+TGG + chr6_2:55927600-55927619 None:intergenic 40.0%
CCCACAACACTGCATTTATA+TGG + chr6_2:55927648-55927667 None:intergenic 40.0%
AAATGCAGTGTTGTGGGATA+TGG - chr6_2:55927651-55927670 Msa0920610:intron 40.0%
! TTTTTAAATGTCCGCCATGG+TGG + chr6_2:55927718-55927737 None:intergenic 40.0%
ACCCCCAATTCTTCATAGTT+AGG + chr6_2:55927787-55927806 None:intergenic 40.0%
GCTGATTGAAACACTTGATC+TGG - chr6_2:55927807-55927826 Msa0920610:intron 40.0%
TAACGCAGGTTATTAGGAGT+TGG + chr6_2:55927865-55927884 None:intergenic 40.0%
TGATCTTAAGATAGCTCAGG+AGG - chr6_2:55927967-55927986 Msa0920610:intron 40.0%
AGGGGAATGCTAATTATCTC+AGG + chr6_2:55927996-55928015 None:intergenic 40.0%
TGAGATAATTAGCATTCCCC+TGG - chr6_2:55927995-55928014 Msa0920610:intron 40.0%
GAGGTCATGAGTTAGTTACA+AGG + chr6_2:55928182-55928201 None:intergenic 40.0%
AGTTTGACAGCTGTATACAG+AGG + chr6_2:55928201-55928220 None:intergenic 40.0%
GCACACTATTCCTTTCTGAA+AGG - chr6_2:55928521-55928540 Msa0920610:intron 40.0%
TGACTGTACATCATCAGAAC+GGG + chr6_2:55928581-55928600 None:intergenic 40.0%
GTGACTGTACATCATCAGAA+CGG + chr6_2:55928582-55928601 None:intergenic 40.0%
TCTACGTTTCGGACTAATTG+TGG - chr6_2:55928652-55928671 Msa0920610:intron 40.0%
CTACGTTTCGGACTAATTGT+GGG - chr6_2:55928653-55928672 Msa0920610:intron 40.0%
! AATTGTGGGTTGCTTTCGTT+TGG - chr6_2:55928667-55928686 Msa0920610:intron 40.0%
!! GTCGGAGATTAGAGTTTTGA+TGG - chr6_2:55929107-55929126 Msa0920610:CDS 40.0%
GACAGATGGAGACTTTCAAT+TGG + chr6_2:55929179-55929198 None:intergenic 40.0%
GTTATGAAAGTGGAACTGTG+TGG - chr6_2:55929233-55929252 Msa0920610:intron 40.0%
TTTCAGATCATGTTCGAGGA+TGG - chr6_2:55929400-55929419 Msa0920610:CDS 40.0%
GAGATTGTGATGCAACTCTT+AGG - chr6_2:55929468-55929487 Msa0920610:CDS 40.0%
TGCATCTATCTGTAGGACAT+TGG - chr6_2:55929521-55929540 Msa0920610:intron 40.0%
GCATCTATCTGTAGGACATT+GGG - chr6_2:55929522-55929541 Msa0920610:intron 40.0%
!! TTCCTTTCTTATCGGTGTTG+AGG + chr6_2:55929601-55929620 None:intergenic 40.0%
TCAACACCGATAAGAAAGGA+AGG - chr6_2:55929600-55929619 Msa0920610:intron 40.0%
ACAGTCTCACAGGTACTTTA+TGG + chr6_2:55929848-55929867 None:intergenic 40.0%
! AAAGTACCTGTGAGACTGTT+TGG - chr6_2:55929849-55929868 Msa0920610:five_prime_UTR 40.0%
AAGTACCTGTGAGACTGTTT+GGG - chr6_2:55929850-55929869 Msa0920610:five_prime_UTR 40.0%
CAGGAGAGAATGGAACAATT+TGG + chr6_2:55929978-55929997 None:intergenic 40.0%
CATGTAACAACAGGAGAGAA+TGG + chr6_2:55929988-55930007 None:intergenic 40.0%
! GCTTGGTAACATGTAACAAC+AGG + chr6_2:55929997-55930016 None:intergenic 40.0%
CAGGTGAAGGAAGTGAAAAT+TGG - chr6_2:55930091-55930110 Msa0920610:five_prime_UTR 40.0%
TTCTTCTGAGTTCAGAGTAC+CGG - chr6_2:55930244-55930263 Msa0920610:five_prime_UTR 40.0%
CAGAGAAACTCCCACTTTAT+TGG + chr6_2:55930486-55930505 None:intergenic 40.0%
GGCAAGAGAAAGAGTGATGA+TGG - chr6_2:55922853-55922872 Msa0920610:intron 45.0%
!! CTAGACAGAAGCATCCTACA+GGG + chr6_2:55923126-55923145 None:intergenic 45.0%
CTTCTGTCTAGCTGTTCTTC+AGG - chr6_2:55923135-55923154 Msa0920610:intron 45.0%
TGTTCTTCAGGCTGCAAATG+TGG - chr6_2:55923147-55923166 Msa0920610:intron 45.0%
GTTCTTCAGGCTGCAAATGT+GGG - chr6_2:55923148-55923167 Msa0920610:intron 45.0%
ATATGTCGGAGAAGGTGATG+TGG - chr6_2:55923559-55923578 Msa0920610:intron 45.0%
AAACATGCGAACAGAGGCTT+TGG - chr6_2:55923686-55923705 Msa0920610:intron 45.0%
TGACTCTGTTGTAGTGATGG+TGG - chr6_2:55924413-55924432 Msa0920610:intron 45.0%
! GCCACTAATTTAGGCTTGGT+AGG + chr6_2:55924538-55924557 None:intergenic 45.0%
! GTGAGCTAGTGCTTTTGAAC+AGG - chr6_2:55924653-55924672 Msa0920610:intron 45.0%
TCAGTATAGTCGACGATGGT+TGG - chr6_2:55924749-55924768 Msa0920610:intron 45.0%
GTGAAGGGAGGGAAGTTTAT+TGG - chr6_2:55925018-55925037 Msa0920610:intron 45.0%
TCGTGAAACTCCGTACGTAA+CGG + chr6_2:55925155-55925174 None:intergenic 45.0%
ACGGAGTTTCACGAATTCTG+AGG - chr6_2:55925161-55925180 Msa0920610:intron 45.0%
TGCGTTGTGAACATGAGAAG+TGG - chr6_2:55925399-55925418 Msa0920610:intron 45.0%
AAGATCACCTCTTCGCTTTC+AGG - chr6_2:55925494-55925513 Msa0920610:intron 45.0%
AGATCACCTCTTCGCTTTCA+GGG - chr6_2:55925495-55925514 Msa0920610:intron 45.0%
AGGGTAAGGGTTCTGTACAT+CGG - chr6_2:55925514-55925533 Msa0920610:intron 45.0%
TTGAGGTTGTAGGGTCCTTA+AGG - chr6_2:55925786-55925805 Msa0920610:intron 45.0%
GGTCCTTAAGGTATAGTTGG+AGG - chr6_2:55925798-55925817 Msa0920610:intron 45.0%
TAGCTTGAGGGGGACTATTA+GGG + chr6_2:55925962-55925981 None:intergenic 45.0%
! TTAGCTTGAGGGGGACTATT+AGG + chr6_2:55925963-55925982 None:intergenic 45.0%
AGCTAGAGGTTACATGCTAG+AGG - chr6_2:55926008-55926027 Msa0920610:intron 45.0%
CTGGATTTCTCTTGCATAGC+TGG - chr6_2:55926153-55926172 Msa0920610:intron 45.0%
TAGAGGCCCAACTGCATTTA+CGG - chr6_2:55926198-55926217 Msa0920610:intron 45.0%
CCTATTGCCGTAAATGCAGT+TGG + chr6_2:55926208-55926227 None:intergenic 45.0%
CCAACTGCATTTACGGCAAT+AGG - chr6_2:55926205-55926224 Msa0920610:intron 45.0%
! CCAATTTTCGCCCAGTTGTT+TGG + chr6_2:55926233-55926252 None:intergenic 45.0%
CCAAACAACTGGGCGAAAAT+TGG - chr6_2:55926230-55926249 Msa0920610:intron 45.0%
TGCAAGAGGCAGAAATTCCA+AGG - chr6_2:55926293-55926312 Msa0920610:intron 45.0%
AGCAAGAGGCAGAAATTCCA+AGG - chr6_2:55926382-55926401 Msa0920610:intron 45.0%
CACTGGTCGAGCATAAATTG+AGG + chr6_2:55926431-55926450 None:intergenic 45.0%
GTTTAGTCGTGTAGGCACAA+AGG - chr6_2:55926564-55926583 Msa0920610:intron 45.0%
AAAGAGATCTCGACAAGTCG+TGG + chr6_2:55926767-55926786 None:intergenic 45.0%
! CCGCTTCGTCATTTGAAATG+CGG + chr6_2:55926808-55926827 None:intergenic 45.0%
CCGCATTTCAAATGACGAAG+CGG - chr6_2:55926805-55926824 Msa0920610:intron 45.0%
CGCATTTCAAATGACGAAGC+GGG - chr6_2:55926806-55926825 Msa0920610:intron 45.0%
AATTACCAATCGCGAGCATG+AGG - chr6_2:55926887-55926906 Msa0920610:intron 45.0%
ATTACCAATCGCGAGCATGA+GGG - chr6_2:55926888-55926907 Msa0920610:intron 45.0%
!! ATGTCGATCTTTGGCCTTGA+AGG + chr6_2:55926990-55927009 None:intergenic 45.0%
! ACCTGTCGAGATCCCTTTTA+TGG - chr6_2:55927015-55927034 Msa0920610:intron 45.0%
! GCATGAAGAAGTGTGTTGAG+AGG - chr6_2:55927076-55927095 Msa0920610:intron 45.0%
GTGGGTATCTCTATTCGATG+TGG + chr6_2:55927103-55927122 None:intergenic 45.0%
AATTACCAAACGCGAGCATG+AGG - chr6_2:55927152-55927171 Msa0920610:intron 45.0%
ATTACCAAACGCGAGCATGA+GGG - chr6_2:55927153-55927172 Msa0920610:intron 45.0%
GGCCCACATCATATAGAGAT+AGG - chr6_2:55927188-55927207 Msa0920610:intron 45.0%
! TTTTGAGCCTTCAAGGCCAA+AGG - chr6_2:55926980-55926999 Msa0920610:intron 45.0%
! TCCCACATCGACTAGAAATC+CGG + chr6_2:55927442-55927461 None:intergenic 45.0%
TTGTGGGATATGGCGAAACA+GGG - chr6_2:55927661-55927680 Msa0920610:intron 45.0%
GCGAAACAGGGCTGATTAAT+AGG - chr6_2:55927673-55927692 Msa0920610:intron 45.0%
!! TGATTAATAGGCACTGAGGC+TGG - chr6_2:55927685-55927704 Msa0920610:intron 45.0%
! GCGTTTTTAAATGTCCGCCA+TGG + chr6_2:55927721-55927740 None:intergenic 45.0%
! TGGCGGACATTTAAAAACGC+CGG - chr6_2:55927721-55927740 Msa0920610:intron 45.0%
GTAATCGTGCAATGTTGCAC+CGG + chr6_2:55927743-55927762 None:intergenic 45.0%
GTGCAACATTGCACGATTAC+CGG - chr6_2:55927743-55927762 Msa0920610:intron 45.0%
TGCAACATTGCACGATTACC+GGG - chr6_2:55927744-55927763 Msa0920610:intron 45.0%
AGTTAGGTTATTAGCAGGGC+TGG + chr6_2:55927771-55927790 None:intergenic 45.0%
GGACCATTACCTAATAACGC+AGG + chr6_2:55927879-55927898 None:intergenic 45.0%
AACCTAAGCTGTCACAACCA+GGG + chr6_2:55928015-55928034 None:intergenic 45.0%
! ACAGCTTAGGTTGTACTTGC+AGG - chr6_2:55928023-55928042 Msa0920610:intron 45.0%
AGCTAGAGCTCATGATAGCT+CGG - chr6_2:55928098-55928117 Msa0920610:intron 45.0%
CATGATAGCTCGGAATTGCT+TGG - chr6_2:55928108-55928127 Msa0920610:intron 45.0%
TTGACTGTGGTAAGGACAAC+AGG + chr6_2:55928152-55928171 None:intergenic 45.0%
! GGAGACTATTGACTGTGGTA+AGG + chr6_2:55928160-55928179 None:intergenic 45.0%
! ACAAGGGAGACTATTGACTG+TGG + chr6_2:55928165-55928184 None:intergenic 45.0%
GACAGCTGTCAGTTAGTTAC+AGG + chr6_2:55928225-55928244 None:intergenic 45.0%
GGACAGGTTTATCAGAATGG+AGG - chr6_2:55928688-55928707 Msa0920610:intron 45.0%
AAACAAGCTTACCAGTCTGC+AGG + chr6_2:55928714-55928733 None:intergenic 45.0%
!! TTAGTGGTACTGGTGTGACA+TGG + chr6_2:55929201-55929220 None:intergenic 45.0%
TTGTGATGCAACTCTTAGGC+AGG - chr6_2:55929472-55929491 Msa0920610:CDS 45.0%
GACATTGGGCCTGTTTCAAT+TGG - chr6_2:55929536-55929555 Msa0920610:intron 45.0%
GACCTCAACACCGATAAGAA+AGG - chr6_2:55929596-55929615 Msa0920610:intron 45.0%
ACTCCACTAGTACCAATAGG+CGG + chr6_2:55929701-55929720 None:intergenic 45.0%
CCTACTCCACTAGTACCAAT+AGG + chr6_2:55929704-55929723 None:intergenic 45.0%
CCTATTGGTACTAGTGGAGT+AGG - chr6_2:55929701-55929720 Msa0920610:intron 45.0%
ATATGAGAGGCCGCATTCAA+CGG - chr6_2:55929788-55929807 Msa0920610:intron 45.0%
! ATTGTGTTGTTCAGAGGTGC+AGG - chr6_2:55930072-55930091 Msa0920610:five_prime_UTR 45.0%
TGTGGTAGAGATTGCCACTG+TGG - chr6_2:55922916-55922935 Msa0920610:intron 50.0%
GTGGTAGAGATTGCCACTGT+GGG - chr6_2:55922917-55922936 Msa0920610:intron 50.0%
CTTATGCTCACTGTCCCTGT+AGG - chr6_2:55923109-55923128 Msa0920610:CDS 50.0%
!! GCTAGACAGAAGCATCCTAC+AGG + chr6_2:55923127-55923146 None:intergenic 50.0%
CAGTATTCGGGCAGCAACTA+TGG + chr6_2:55923813-55923832 None:intergenic 50.0%
GCAGATCAAGATTGCCACTG+TGG - chr6_2:55924478-55924497 Msa0920610:intron 50.0%
TACACTGAACAGCACCACAG+TGG + chr6_2:55924495-55924514 None:intergenic 50.0%
!! ACTGTGGTGCTGTTCAGTGT+AGG - chr6_2:55924494-55924513 Msa0920610:intron 50.0%
TGTTCAGTGTAGGCGTAAGC+TGG - chr6_2:55924504-55924523 Msa0920610:intron 50.0%
GTTCAGTGTAGGCGTAAGCT+GGG - chr6_2:55924505-55924524 Msa0920610:intron 50.0%
ACAACCTTGCCTTCGTGACA+AGG + chr6_2:55925379-55925398 None:intergenic 50.0%
ACCTCTTCGCTTTCAGGGTA+AGG - chr6_2:55925500-55925519 Msa0920610:intron 50.0%
CCTCTTCGCTTTCAGGGTAA+GGG - chr6_2:55925501-55925520 Msa0920610:intron 50.0%
GCAATAGGGGCCAAACAACT+GGG - chr6_2:55926220-55926239 Msa0920610:intron 50.0%
GAGACAAGTGTGGAAGCAAG+AGG - chr6_2:55926368-55926387 Msa0920610:intron 50.0%
GCCATAAAAGGGATCTCGAC+AGG + chr6_2:55927019-55927038 None:intergenic 50.0%
!! ATGTCGACCTTTGGCCTTGA+AGG + chr6_2:55927255-55927274 None:intergenic 50.0%
GCACAAGCTCCAGCGATAAA+TGG + chr6_2:55927280-55927299 None:intergenic 50.0%
!! TGCCGGATTTCTAGTCGATG+TGG - chr6_2:55927437-55927456 Msa0920610:CDS 50.0%
!! GCCGGATTTCTAGTCGATGT+GGG - chr6_2:55927438-55927457 Msa0920610:CDS 50.0%
GTTGTGGGATATGGCGAAAC+AGG - chr6_2:55927660-55927679 Msa0920610:intron 50.0%
! GGGCTGATTAATAGGCACTG+AGG - chr6_2:55927681-55927700 Msa0920610:intron 50.0%
GCAACATTGCACGATTACCG+GGG - chr6_2:55927745-55927764 Msa0920610:intron 50.0%
ACCTAAGCTGTCACAACCAG+GGG + chr6_2:55928014-55928033 None:intergenic 50.0%
CAACCTAAGCTGTCACAACC+AGG + chr6_2:55928016-55928035 None:intergenic 50.0%
! TGGGTTGCTTTCGTTTGGAC+AGG - chr6_2:55928672-55928691 Msa0920610:intron 50.0%
ACTGGTGTGACATGGACAGA+TGG + chr6_2:55929193-55929212 None:intergenic 50.0%
TAGTACCAATAGGCGGCATG+GGG + chr6_2:55929694-55929713 None:intergenic 50.0%
CTAGTACCAATAGGCGGCAT+GGG + chr6_2:55929695-55929714 None:intergenic 50.0%
ACTAGTACCAATAGGCGGCA+TGG + chr6_2:55929696-55929715 None:intergenic 50.0%
ATGCCGCCTATTGGTACTAG+TGG - chr6_2:55929695-55929714 Msa0920610:intron 50.0%
TATGAGAGGCCGCATTCAAC+GGG - chr6_2:55929789-55929808 Msa0920610:intron 50.0%
TCGTGCATTCCCGTTGAATG+CGG + chr6_2:55929801-55929820 None:intergenic 50.0%
AACGGGAATGCACGACAGAA+GGG - chr6_2:55929806-55929825 Msa0920610:intron 50.0%
GCTATCCCAAACAGTCTCAC+AGG + chr6_2:55929858-55929877 None:intergenic 50.0%
! TTGTTCAGAGGTGCAGGTGA+AGG - chr6_2:55930078-55930097 Msa0920610:five_prime_UTR 50.0%
!! TCACGAATTCTGAGGCGCCT+TGG - chr6_2:55925169-55925188 Msa0920610:intron 55.0%
CTGTTGGACTTGCGGTTCAG+AGG - chr6_2:55925348-55925367 Msa0920610:intron 55.0%
CTTGCCTTCGTGACAAGGCT+CGG + chr6_2:55925374-55925393 None:intergenic 55.0%
CCCTTACCCTGAAAGCGAAG+AGG + chr6_2:55925504-55925523 None:intergenic 55.0%
GGCAATAGGGGCCAAACAAC+TGG - chr6_2:55926219-55926238 Msa0920610:intron 55.0%
! GCATGAGGGAGTGTGTTGAG+AGG - chr6_2:55926902-55926921 Msa0920610:intron 55.0%
TCCCCTGGTTGTGACAGCTT+AGG - chr6_2:55928010-55928029 Msa0920610:intron 55.0%
GCAGGCAAGAACTCTGCTCT+TGG - chr6_2:55928041-55928060 Msa0920610:intron 55.0%
AGTACCAATAGGCGGCATGG+GGG + chr6_2:55929693-55929712 None:intergenic 55.0%
CAACGGGAATGCACGACAGA+AGG - chr6_2:55929805-55929824 Msa0920610:intron 55.0%
! CGAGCCTTGTCACGAAGGCA+AGG - chr6_2:55925372-55925391 Msa0920610:intron 60.0%
CACTGTCGAACCCCTCACAG+TGG - chr6_2:55925537-55925556 Msa0920610:intron 60.0%
TGTCGAACCCCTCACAGTGG+TGG - chr6_2:55925540-55925559 Msa0920610:intron 60.0%
GTCGAACCCCTCACAGTGGT+GGG - chr6_2:55925541-55925560 Msa0920610:intron 60.0%
TTCGGCTCCCACCACTGTGA+GGG + chr6_2:55925551-55925570 None:intergenic 60.0%
CACTCCCTCATGCTCGCGAT+TGG + chr6_2:55926895-55926914 None:intergenic 60.0%
CACTCCCTCATGCTCGCGTT+TGG + chr6_2:55927160-55927179 None:intergenic 60.0%
AGGCTGGAGCGAATCCACCA+TGG - chr6_2:55927701-55927720 Msa0920610:intron 60.0%
CTGGAGCGAATCCACCATGG+CGG - chr6_2:55927704-55927723 Msa0920610:intron 60.0%
!! GTTATTAGCAGGGCTGGCCC+CGG + chr6_2:55927765-55927784 None:intergenic 60.0%
CAGAATGGAGGCCTGCAGAC+TGG - chr6_2:55928700-55928719 Msa0920610:intron 60.0%
!! GGGGAAGAAGCGCTACGCTT+AGG + chr6_2:55929674-55929693 None:intergenic 60.0%
TCTTCCCCCATGCCGCCTAT+TGG - chr6_2:55929686-55929705 Msa0920610:intron 60.0%
! GAGGCCGAGCCTTGTCACGA+AGG - chr6_2:55925367-55925386 Msa0920610:intron 65.0%
TCGGCTCCCACCACTGTGAG+GGG + chr6_2:55925550-55925569 None:intergenic 65.0%
CTTCGGCTCCCACCACTGTG+AGG + chr6_2:55925552-55925571 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 55921480 55930509 55921480 ID=Msa0920610;Name=Msa0920610
chr6_2 mRNA 55921480 55930509 55921480 ID=Msa0920610-mRNA-1;Parent=Msa0920610;Name=Msa0920610-mRNA-1;_AED=0.09;_eAED=0.09;_QI=678|0.90|1|1|0.81|0.75|12|445|311
chr6_2 exon 55921480 55921895 55921480 ID=Msa0920610-mRNA-1:exon:8360;Parent=Msa0920610-mRNA-1
chr6_2 exon 55922483 55922583 55922483 ID=Msa0920610-mRNA-1:exon:8359;Parent=Msa0920610-mRNA-1
chr6_2 exon 55922883 55922928 55922883 ID=Msa0920610-mRNA-1:exon:8358;Parent=Msa0920610-mRNA-1
chr6_2 exon 55923058 55923142 55923058 ID=Msa0920610-mRNA-1:exon:8357;Parent=Msa0920610-mRNA-1
chr6_2 exon 55923268 55923295 55923268 ID=Msa0920610-mRNA-1:exon:8356;Parent=Msa0920610-mRNA-1
chr6_2 exon 55927425 55927527 55927425 ID=Msa0920610-mRNA-1:exon:8355;Parent=Msa0920610-mRNA-1
chr6_2 exon 55928144 55928315 55928144 ID=Msa0920610-mRNA-1:exon:8354;Parent=Msa0920610-mRNA-1
chr6_2 exon 55928417 55928495 55928417 ID=Msa0920610-mRNA-1:exon:8353;Parent=Msa0920610-mRNA-1
chr6_2 exon 55928759 55928858 55928759 ID=Msa0920610-mRNA-1:exon:8352;Parent=Msa0920610-mRNA-1
chr6_2 exon 55929051 55929156 55929051 ID=Msa0920610-mRNA-1:exon:8351;Parent=Msa0920610-mRNA-1
chr6_2 exon 55929386 55929512 55929386 ID=Msa0920610-mRNA-1:exon:8350;Parent=Msa0920610-mRNA-1
chr6_2 exon 55929814 55930509 55929814 ID=Msa0920610-mRNA-1:exon:8349;Parent=Msa0920610-mRNA-1
chr6_2 five_prime_UTR 55929832 55930509 55929832 ID=Msa0920610-mRNA-1:five_prime_utr;Parent=Msa0920610-mRNA-1
chr6_2 CDS 55929814 55929831 55929814 ID=Msa0920610-mRNA-1:cds;Parent=Msa0920610-mRNA-1
chr6_2 CDS 55929386 55929512 55929386 ID=Msa0920610-mRNA-1:cds;Parent=Msa0920610-mRNA-1
chr6_2 CDS 55929051 55929156 55929051 ID=Msa0920610-mRNA-1:cds;Parent=Msa0920610-mRNA-1
chr6_2 CDS 55928759 55928858 55928759 ID=Msa0920610-mRNA-1:cds;Parent=Msa0920610-mRNA-1
chr6_2 CDS 55928417 55928495 55928417 ID=Msa0920610-mRNA-1:cds;Parent=Msa0920610-mRNA-1
chr6_2 CDS 55928144 55928315 55928144 ID=Msa0920610-mRNA-1:cds;Parent=Msa0920610-mRNA-1
chr6_2 CDS 55927425 55927527 55927425 ID=Msa0920610-mRNA-1:cds;Parent=Msa0920610-mRNA-1
chr6_2 CDS 55923268 55923295 55923268 ID=Msa0920610-mRNA-1:cds;Parent=Msa0920610-mRNA-1
chr6_2 CDS 55923058 55923142 55923058 ID=Msa0920610-mRNA-1:cds;Parent=Msa0920610-mRNA-1
chr6_2 CDS 55922883 55922928 55922883 ID=Msa0920610-mRNA-1:cds;Parent=Msa0920610-mRNA-1
chr6_2 CDS 55922512 55922583 55922512 ID=Msa0920610-mRNA-1:cds;Parent=Msa0920610-mRNA-1
chr6_2 three_prime_UTR 55922483 55922511 55922483 ID=Msa0920610-mRNA-1:three_prime_utr;Parent=Msa0920610-mRNA-1
chr6_2 three_prime_UTR 55921480 55921895 55921480 ID=Msa0920610-mRNA-1:three_prime_utr;Parent=Msa0920610-mRNA-1
Gene Sequence

>Msa0920610

ATGCCCATCATGAAAAAGAATTCTGAGCAGAATCGTTTTGAAGCTGTATTCACGAAGCTGATGAACAATCTTGGTGAAACTGTTGACTTTGAACTTCCAGATTCGATTAAAAACAGGACAACGCAGTACACCCATATAAAGCGCAATATATATCTCACTAAGAAGGGCAAGAGAAAGAGTGATGATGGTATATTCTGTTCTTGCGCATCTTCTGATTCTACTGCTGTATGTGGTAGAGATTGCCACTGTGGGATGCTTCTGTCTAGCTGTTCTTCAGGCTGCAAATGTGGGATCTCATGTCTCAACAAAGCTTTTCAGCACCGTCCTATTAAAAAGATGAAATTAATCAAGACTGAGAAATGTGGATCTGGAATTGTGGCAGATGAAGATATAAAGCATGGGGAGTTTGTAATTGAATATGTCGGAGAAGTTATCGATGATAAAACATGCGAACAGAGGCTTTGGAATATGAAAGATCGTGGGGAAACAAACTTCTACTTATGTGAAATCAATCGAGATATGGTGATAGATGCGACAAATAAAGGAAACAAGTCAAGATACATCAACCATAGTTGCTGCCCGAATACTGAGATGCAGAAATGGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGTTCAGTGTAGGCGTAAGCTGGGTGCGCGACCTACCAAGCCTAAATTAGTGGCATATCAGGTTTATCAGAATGGAGGCCTGCAGACTGGTAGTTCTCGGGTTGTTGACCATTCAAATTGCTTACTCAATTGCATCGATGAAGTTATTATGATAAAACAACTTGGAAATGTGAGATTTGGGATTATTAAATGGTTCGATGAGTATTCTCGAAAACACAAGATCATGTTCGAGGATGGTTGTGTTGAAATATATGACATGTCAAAAGAAGATTGGGAACTAGTGAGATTGTGA

Protein sequence

>Msa0920610

MPIMKKNSEQNRFEAVFTKLMNNLGETVDFELPDSIKNRTTQYTHIKRNIYLTKKGKRKSDDGIFCSCASSDSTAVCGRDCHCGMLLSSCSSGCKCGISCLNKAFQHRPIKKMKLIKTEKCGSGIVADEDIKHGEFVIEYVGEVIDDKTCEQRLWNMKDRGETNFYLCEINRDMVIDATNKGNKSRYINHSCCPNTEMQKWFVQFGADQDCHCGAVQCRRKLGARPTKPKLVAYQVYQNGGLQTGSSRVVDHSNCLLNCIDEVIMIKQLGNVRFGIIKWFDEYSRKHKIMFEDGCVEIYDMSKEDWELVRL*