AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1156210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1156210 MtrunA17_Chr7g0249581 95.763 472 10 3 3 468 4 471 0.0 910
Msa1156210 MtrunA17_Chr1g0172361 41.989 362 203 5 93 454 62 416 1.53e-84 266
Msa1156210 MtrunA17_Chr7g0271771 40.625 352 205 2 104 454 116 464 1.52e-79 255
Msa1156210 MtrunA17_Chr7g0270701 31.445 353 221 8 116 454 49 394 2.18e-40 149
Msa1156210 MtrunA17_Chr7g0268791 34.717 265 168 4 189 452 134 394 1.85e-38 144
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1156210 AT5G36170.1 77.037 405 89 1 64 468 56 456 0.0 655
Msa1156210 AT5G36170.2 77.228 404 88 1 65 468 56 455 0.0 654
Msa1156210 AT5G36170.3 75.410 305 71 1 64 368 56 356 1.56e-167 477
Msa1156210 AT5G36170.4 75.658 304 70 1 65 368 56 355 3.35e-167 476
Msa1156210 AT1G56350.1 37.500 384 225 3 71 454 103 471 1.24e-77 250
Msa1156210 AT3G57190.1 35.405 370 224 6 93 460 47 403 2.82e-68 224
Msa1156210 AT3G62910.1 31.629 313 209 4 141 452 89 397 5.94e-42 154
Msa1156210 AT2G47020.4 30.769 312 206 6 149 454 26 333 4.36e-33 128
Msa1156210 AT2G47020.1 30.769 312 206 6 149 454 91 398 7.96e-33 129
Msa1156210 AT2G47020.3 28.698 338 205 6 149 454 91 424 1.45e-29 120
Msa1156210 AT2G47020.5 29.825 228 153 3 149 372 91 315 3.35e-24 103

Find 134 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCTGACTCAACTTCTTTC+TGG 0.090679 7_4:-44470410 Msa1156210:CDS
CGAAGACCTTTGGAATTAAA+AGG 0.167157 7_4:+44469571 None:intergenic
TTTATAAGACCTAAAGATTT+TGG 0.206035 7_4:+44472496 None:intergenic
ATCATCTGGTCTACAATTAT+TGG 0.231180 7_4:-44471101 Msa1156210:CDS
AGTTCAGTTCATTCCGGATA+TGG 0.256233 7_4:+44472639 None:intergenic
AAGCATCTTGTAGCTCCTTT+TGG 0.269602 7_4:-44471051 Msa1156210:CDS
TATGCGTATGGGTATTTGTC+TGG 0.283774 7_4:-44469628 Msa1156210:CDS
CTAATCTCCAAGTCCTCTTC+TGG 0.294453 7_4:+44469375 None:intergenic
ACTGGGCGGACATGCTTCTT+AGG 0.312508 7_4:-44469759 Msa1156210:CDS
TCAACATTCAAAGATTCTTC+TGG 0.317964 7_4:+44469402 None:intergenic
CTCTGTTATGGATGGAGAAT+TGG 0.333602 7_4:-44468748 Msa1156210:CDS
GAAATGGAATCCGTTGATAA+AGG 0.334721 7_4:-44470491 Msa1156210:CDS
TCATACTATACTTGTGTTTG+AGG 0.356154 7_4:+44468706 None:intergenic
CTGTAACCGCCAAAATCTTT+AGG 0.368663 7_4:-44472505 Msa1156210:CDS
ACATCCTTTACTAGTTTGTA+TGG 0.386451 7_4:+44468801 None:intergenic
TCCATAACAGAGGTGATATC+TGG 0.399290 7_4:+44468759 None:intergenic
AGTTATGCTGACAGAGGAAA+TGG 0.399496 7_4:-44470507 Msa1156210:CDS
ACCAGATATCACCTCTGTTA+TGG 0.400399 7_4:-44468760 Msa1156210:CDS
GGACGTAGTGAAGGCTGAAT+GGG 0.404216 7_4:-44468853 Msa1156210:CDS
TCACTCAGTTCAGTTCATTC+CGG 0.410950 7_4:+44472633 None:intergenic
AGAATCAATTGAGCAGCGTT+GGG 0.411480 7_4:-44472241 Msa1156210:CDS
GAAGACCTTTGGAATTAAAA+GGG 0.418012 7_4:+44469572 None:intergenic
CGAAAGAGTCTGTTGAGCTT+TGG 0.418363 7_4:+44471018 None:intergenic
TATCGTTCCTCTCCATTGAA+TGG 0.420444 7_4:+44468641 None:intergenic
TTCATTCCGGATATGGTTAG+TGG 0.420969 7_4:+44472646 None:intergenic
CTAGTAAAGGATGTAAGAAC+AGG 0.421372 7_4:-44468792 Msa1156210:CDS
TTCTCAAGAGCGGGTGGAAA+AGG 0.423998 7_4:-44469351 Msa1156210:CDS
TATTACCTGACGAAGACCTT+TGG 0.425839 7_4:+44469561 None:intergenic
ATTGAGCAGCGTTGGGGAAG+GGG 0.428787 7_4:-44472234 Msa1156210:CDS
TGAAATTCCAGAAGAGGACT+TGG 0.431477 7_4:-44469382 Msa1156210:CDS
ATGCGTATGGGTATTTGTCT+GGG 0.432886 7_4:-44469627 Msa1156210:CDS
TTCCTTTACCTCCCATTCAA+TGG 0.441158 7_4:-44468653 Msa1156210:three_prime_UTR
CAGCGTTGGGGAAGGGGAGG+AGG 0.451858 7_4:-44472228 Msa1156210:CDS
GGGACGTAGTGAAGGCTGAA+TGG 0.461610 7_4:-44468854 Msa1156210:CDS
AAATGGAATCCGTTGATAAA+GGG 0.463579 7_4:-44470490 Msa1156210:CDS
GAAGAAGAAGAGGGAAATTG+TGG 0.464000 7_4:+44472458 None:intergenic
GGGTATTTGTCTGGGGAGAA+AGG 0.464816 7_4:-44469619 Msa1156210:CDS
GTACCAGGTGATAGAGGAAA+AGG 0.465544 7_4:+44472377 None:intergenic
AAATCTCTTGGAGAAGAAGC+TGG 0.467752 7_4:-44469685 Msa1156210:CDS
TTCAATGGAGAGGAACGATA+TGG 0.469674 7_4:-44468638 Msa1156210:three_prime_UTR
TAATTCCAAAGGTCTTCGTC+AGG 0.477891 7_4:-44469566 Msa1156210:intron
TCTTAGGATGTATGTGAGAT+GGG 0.480416 7_4:-44469743 Msa1156210:CDS
ATCTCTATTACAGCAGGTGC+GGG 0.480542 7_4:-44470362 Msa1156210:CDS
AAGGAACACATCGCATTGTT+CGG 0.481188 7_4:-44469600 Msa1156210:CDS
GAGAATCAATTGAGCAGCGT+TGG 0.482723 7_4:-44472242 Msa1156210:CDS
CGAATTACACATATCCCAAC+TGG 0.485827 7_4:-44469294 Msa1156210:CDS
CTCCATTGAATGGGAGGTAA+AGG 0.485994 7_4:+44468651 None:intergenic
CCTTTACTAGTTTGTATGGA+TGG 0.486525 7_4:+44468805 None:intergenic
ATCGTTCCTCTCCATTGAAT+GGG 0.486855 7_4:+44468642 None:intergenic
AGAGTGGTTGAGAAATCTCT+TGG 0.487977 7_4:-44469697 Msa1156210:CDS
GTTGAAGGCCGTTATGCGTA+TGG 0.488122 7_4:-44469640 Msa1156210:CDS
GCGTAACCACTAACCATATC+CGG 0.500404 7_4:-44472652 Msa1156210:five_prime_UTR
AGAAGGACGATGAGAGAGAG+TGG 0.500748 7_4:+44472400 None:intergenic
AGATGCTTCCTCTTCCAACT+TGG 0.503424 7_4:+44471066 None:intergenic
TCTGCCACCATCGAAGTTGA+AGG 0.503655 7_4:-44469655 Msa1156210:CDS
GAATGTTGAAATTCCAGAAG+AGG 0.507034 7_4:-44469388 Msa1156210:CDS
GAGATTAGCTTCTCAAGAGC+GGG 0.508195 7_4:-44469360 Msa1156210:CDS
TCAACAGACTCTTTCGACAT+TGG 0.508700 7_4:-44471011 Msa1156210:CDS
TTTGGCTCGGTCGTCCCAAA+AGG 0.511359 7_4:+44471036 None:intergenic
AGTAGTTCTGTTTGCGACGC+CGG 0.512771 7_4:-44472264 Msa1156210:CDS
CGATATGGTTGTTGTGTCAT+GGG 0.519827 7_4:-44468623 Msa1156210:three_prime_UTR
AAAGAGATTAGAGAATCATC+TGG 0.520355 7_4:-44471115 Msa1156210:CDS
GGAGCAAGAACTTGCCAAGT+TGG 0.521085 7_4:-44471080 Msa1156210:CDS
GGAAATTGTGGAATGAGAAA+TGG 0.522245 7_4:+44472470 None:intergenic
GAAACAGTACCAGGTGATAG+AGG 0.524057 7_4:+44472371 None:intergenic
TTCATAAAGCCCTTTATCAA+CGG 0.525372 7_4:+44470481 None:intergenic
GGTGTCACTCTTCGCTGCAC+AGG 0.525481 7_4:-44469273 Msa1156210:intron
AATTGAGCAGCGTTGGGGAA+GGG 0.525505 7_4:-44472235 Msa1156210:CDS
AAAGATTCTTCTGGAAGAAG+AGG 0.527140 7_4:+44469411 None:intergenic
CAATTGAGCAGCGTTGGGGA+AGG 0.530209 7_4:-44472236 Msa1156210:CDS
AGCGAAGAGTGACACCAGTT+GGG 0.530416 7_4:+44469280 None:intergenic
ATGTGGTGAAGAAGAAGAAG+AGG 0.532553 7_4:+44472448 None:intergenic
CCATCCATACAAACTAGTAA+AGG 0.535045 7_4:-44468805 Msa1156210:CDS
CTGAATTTAAACAGATTCGA+GGG 0.536188 7_4:-44468875 Msa1156210:CDS
AGAACTTGCCAAGTTGGAAG+AGG 0.536733 7_4:-44471074 Msa1156210:CDS
TTTGAGGTAAGATTTGATGA+AGG 0.537806 7_4:+44468722 None:intergenic
TGCGGGAGGTACTGATGCAC+AGG 0.539451 7_4:-44470345 Msa1156210:intron
TCTGGTCCTTACGACAAAGA+AGG 0.540896 7_4:-44470392 Msa1156210:CDS
ACGCTGCTCAATTGATTCTC+CGG 0.541033 7_4:+44472245 None:intergenic
AAGAGATTTCTCAACCACTC+TGG 0.542572 7_4:+44469699 None:intergenic
ACTGAATTTAAACAGATTCG+AGG 0.544820 7_4:-44468876 Msa1156210:CDS
TTGAGGTAAGATTTGATGAA+GGG 0.548656 7_4:+44468723 None:intergenic
TGTGGTGAAGAAGAAGAAGA+GGG 0.548892 7_4:+44472449 None:intergenic
GAAGCGATTCGTTTAAGCCA+TGG 0.551280 7_4:-44472564 Msa1156210:exon
GAGTCTGTTGAGCTTTGGCT+CGG 0.551498 7_4:+44471023 None:intergenic
ACAAGCGATTCCGCACTTCA+AGG 0.554845 7_4:-44472197 Msa1156210:intron
ACAAATACCCATACGCATAA+CGG 0.557181 7_4:+44469632 None:intergenic
GCTGTTATCTCTATTACAGC+AGG 0.558128 7_4:-44470368 Msa1156210:CDS
CAGCGAAGAGTGACACCAGT+TGG 0.559310 7_4:+44469279 None:intergenic
TGGTGTAGTAGCAGCACAGA+GGG 0.560056 7_4:+44472528 None:intergenic
TTCTTAGGATGTATGTGAGA+TGG 0.564227 7_4:-44469744 Msa1156210:CDS
ACAGCACCTTCTTTGTCGTA+AGG 0.565785 7_4:+44470386 None:intergenic
GAGCAGCGTTGGGGAAGGGG+AGG 0.570391 7_4:-44472231 Msa1156210:CDS
AACTGAATAAGTCAATTGAT+CGG 0.574053 7_4:-44470436 Msa1156210:CDS
GATATCACCTCTGTTATGGA+TGG 0.574268 7_4:-44468756 Msa1156210:CDS
ACGATATGGTTGTTGTGTCA+TGG 0.576481 7_4:-44468624 Msa1156210:three_prime_UTR
TTGAAGGCCGTTATGCGTAT+GGG 0.580211 7_4:-44469639 Msa1156210:CDS
AAGACCTTTGGAATTAAAAG+GGG 0.580978 7_4:+44469573 None:intergenic
GGTGATAGAGGAAAAGGAGA+AGG 0.593572 7_4:+44472383 None:intergenic
GATTCGAGGGGACGTAGTGA+AGG 0.600180 7_4:-44468862 Msa1156210:CDS
TGCGTATGGGTATTTGTCTG+GGG 0.601450 7_4:-44469626 Msa1156210:CDS
GGAGATTAGCTTCTCAAGAG+CGG 0.603522 7_4:-44469361 Msa1156210:CDS
AGTATGACAATGTCTACAAG+TGG 0.605383 7_4:-44468690 Msa1156210:CDS
AAAGATAAGAAAGGAAAATG+TGG 0.609177 7_4:+44472431 None:intergenic
TCAAGAGCGGGTGGAAAAGG+AGG 0.611511 7_4:-44469348 Msa1156210:CDS
TATCTCTATTACAGCAGGTG+CGG 0.613713 7_4:-44470363 Msa1156210:CDS
ATAACGGCCTTCAACTTCGA+TGG 0.618031 7_4:+44469648 None:intergenic
GCTCAATGACTACAAAACTC+AGG 0.619358 7_4:-44470963 Msa1156210:intron
TTACCTCCCATTCAATGGAG+AGG 0.623862 7_4:-44468648 Msa1156210:three_prime_UTR
TGGGATATGTGTAATTCGAA+CGG 0.626225 7_4:+44469299 None:intergenic
TCGTTTGAAAGCGAAGCTGT+TGG 0.632187 7_4:-44468922 Msa1156210:CDS
ATTAGCTTCTCAAGAGCGGG+TGG 0.632510 7_4:-44469357 Msa1156210:CDS
AGGAGGTCAGAATGTTAACA+AGG 0.634298 7_4:-44469331 Msa1156210:CDS
GATGAGAGAGAGTGGTGGTG+CGG 0.635635 7_4:+44472408 None:intergenic
GTATGACAATGTCTACAAGT+GGG 0.640154 7_4:-44468689 Msa1156210:CDS
GTTCCTCTCCATTGAATGGG+AGG 0.640753 7_4:+44468645 None:intergenic
ACGGCCTTCAACTTCGATGG+TGG 0.641189 7_4:+44469651 None:intergenic
GAATCAATTGAGCAGCGTTG+GGG 0.643618 7_4:-44472240 Msa1156210:CDS
AGGGTGTGAAACAACCTCCA+TGG 0.644851 7_4:+44472547 None:intergenic
GACGTAGTGAAGGCTGAATG+GGG 0.649092 7_4:-44468852 Msa1156210:CDS
GCGATTCGTTTAAGCCATGG+AGG 0.657249 7_4:-44472561 Msa1156210:exon
TCTATTACAGCAGGTGCGGG+AGG 0.657478 7_4:-44470359 Msa1156210:CDS
AACAATAGTTATGCTGACAG+AGG 0.660154 7_4:-44470513 Msa1156210:CDS
TATGACAATGTCTACAAGTG+GGG 0.662328 7_4:-44468688 Msa1156210:CDS
TGAATTTAAACAGATTCGAG+GGG 0.676303 7_4:-44468874 Msa1156210:CDS
AGGACGATGAGAGAGAGTGG+TGG 0.676872 7_4:+44472403 None:intergenic
CAAGCAGTTACCTTGAAGTG+CGG 0.679223 7_4:+44472187 None:intergenic
TAGTAAAGGATGTAAGAACA+GGG 0.680485 7_4:-44468791 Msa1156210:CDS
CAATTCTCCATCCATAACAG+AGG 0.681172 7_4:+44468749 None:intergenic
GTGGTGCGGAAAGATAAGAA+AGG 0.682965 7_4:+44472422 None:intergenic
CTTAGGATGTATGTGAGATG+GGG 0.691263 7_4:-44469742 Msa1156210:CDS
ATTTCCAGTGCAGGACTGGG+CGG 0.700162 7_4:-44469773 Msa1156210:intron
GTGGTGTAGTAGCAGCACAG+AGG 0.714809 7_4:+44472527 None:intergenic
ACAGAGATACAAAACCAGAG+TGG 0.753790 7_4:-44469713 Msa1156210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAGTTTTCTTATATAAAA+AGG + chr7_4:44468532-44468551 None:intergenic 10.0%
!!! TTTTTTTTTTTTTGTGTTAA+TGG - chr7_4:44468914-44468933 Msa1156210:CDS 10.0%
!!! AATTTTTTTTTTTTCAACTA+TGG - chr7_4:44469475-44469494 Msa1156210:intron 10.0%
!!! ATTTTTTTTTTTTCAACTAT+GGG - chr7_4:44469476-44469495 Msa1156210:intron 10.0%
!!! CTTACTTTTTTTTTAAATTA+CGG + chr7_4:44469671-44469690 None:intergenic 10.0%
!! ATCTATACTAATAAATAAAT+TGG - chr7_4:44470325-44470344 Msa1156210:intron 10.0%
!!! TTTTTTTTTTTTCAACTATG+GGG - chr7_4:44469477-44469496 Msa1156210:intron 15.0%
!!! AACTTTTCTTTTTTAAATCA+CGG - chr7_4:44469555-44469574 Msa1156210:intron 15.0%
!!! GATATAATTCTGAATATTTT+AGG - chr7_4:44470271-44470290 Msa1156210:intron 15.0%
!!! TTTTTGTTTCTAAATCTTTA+CGG + chr7_4:44470394-44470413 None:intergenic 15.0%
!! TTAGAAACAAAAATTAATGA+AGG - chr7_4:44470401-44470420 Msa1156210:CDS 15.0%
!! TTATTGTCTGATATATTATA+CGG - chr7_4:44470959-44470978 Msa1156210:intron 15.0%
!! TCTTATATAAAAAGGTTGTT+TGG + chr7_4:44468524-44468543 None:intergenic 20.0%
!!! TTTATAAGACCTAAAGATTT+TGG + chr7_4:44468715-44468734 None:intergenic 20.0%
!! AAAAAGATCTCAAATAAAGT+AGG + chr7_4:44469065-44469084 None:intergenic 20.0%
!!! ATTTTAAAGCTGAAAATCAA+GGG + chr7_4:44469401-44469420 None:intergenic 20.0%
!!! TATTTTAAAGCTGAAAATCA+AGG + chr7_4:44469402-44469421 None:intergenic 20.0%
!! GAAAATAAATTGCAATCATT+TGG + chr7_4:44469823-44469842 None:intergenic 20.0%
!! TTCTTTAGATTTAAGTCATT+CGG - chr7_4:44469886-44469905 Msa1156210:intron 20.0%
!! ATGAAAAAACAAGTTCATTA+TGG + chr7_4:44470916-44470935 None:intergenic 20.0%
!!! CAATAAATTTTTTACCTCTA+GGG + chr7_4:44470945-44470964 None:intergenic 20.0%
!!! ACAATAAATTTTTTACCTCT+AGG + chr7_4:44470946-44470965 None:intergenic 20.0%
!! TATTGTCTGATATATTATAC+GGG - chr7_4:44470960-44470979 Msa1156210:intron 20.0%
!!! ACATGACTATTTTTTAGAAA+TGG + chr7_4:44471240-44471259 None:intergenic 20.0%
!!! TTTCTAAAAAATAGTCATGT+TGG - chr7_4:44471240-44471259 Msa1156210:intron 20.0%
!! AAAAAAAAAACAACATAGCA+AGG + chr7_4:44471268-44471287 None:intergenic 20.0%
!!! TAATAACTTACTTTTTTGGT+TGG - chr7_4:44471665-44471684 Msa1156210:intron 20.0%
! AAAGATAAGAAAGGAAAATG+TGG + chr7_4:44468780-44468799 None:intergenic 25.0%
! TACTAATATCATAACATCAC+CGG + chr7_4:44469139-44469158 None:intergenic 25.0%
! CTAATGTGCATAATTTAAAG+CGG - chr7_4:44469375-44469394 Msa1156210:CDS 25.0%
! CAGTATATGCTTATACAAAA+GGG + chr7_4:44469931-44469950 None:intergenic 25.0%
! TATACTGCATCATAATGTAT+CGG - chr7_4:44469944-44469963 Msa1156210:intron 25.0%
!! ACAAATCTATCTCTCTTTTA+AGG - chr7_4:44470573-44470592 Msa1156210:intron 25.0%
! AACTGAATAAGTCAATTGAT+CGG - chr7_4:44470772-44470791 Msa1156210:intron 25.0%
!!! AGATAAATTCTAGTTTTTCC+TGG + chr7_4:44471014-44471033 None:intergenic 25.0%
!! TTTTCTATTTGCGTTTTTCT+TGG - chr7_4:44471365-44471384 Msa1156210:intron 25.0%
!!! CAGGTAATAACTTACTTTTT+TGG - chr7_4:44471661-44471680 Msa1156210:intron 25.0%
! CTGTTCAAATAATACAACAT+GGG + chr7_4:44471750-44471769 None:intergenic 25.0%
! TCTGTTCAAATAATACAACA+TGG + chr7_4:44471751-44471770 None:intergenic 25.0%
!!! TCTGTTTTTATTCTTCTGAA+AGG - chr7_4:44471976-44471995 Msa1156210:intron 25.0%
!!! CTGTTTTTATTCTTCTGAAA+GGG - chr7_4:44471977-44471996 Msa1156210:intron 25.0%
!!! CATTTCAAATTGAGTTGATA+AGG + chr7_4:44472035-44472054 None:intergenic 25.0%
! TAGTGATAAAAAGTAGTTTG+TGG - chr7_4:44472697-44472716 Msa1156210:five_prime_UTR 25.0%
! ATAAGACCTAAAGATTTTGG+CGG + chr7_4:44468712-44468731 None:intergenic 30.0%
!! ATATTGATTCGTTCACATTC+TGG + chr7_4:44469191-44469210 None:intergenic 30.0%
TTAAAATAAGTCGTCATGAC+TGG - chr7_4:44469414-44469433 Msa1156210:CDS 30.0%
TGGTCTATATCATTCCTTAA+GGG + chr7_4:44469736-44469755 None:intergenic 30.0%
GAATAAGTAGATTTGCACAT+TGG - chr7_4:44469848-44469867 Msa1156210:intron 30.0%
GCAGTATATGCTTATACAAA+AGG + chr7_4:44469932-44469951 None:intergenic 30.0%
ATACTGCATCATAATGTATC+GGG - chr7_4:44469945-44469964 Msa1156210:intron 30.0%
ATAGTCGCTAAAATCAATTC+CGG - chr7_4:44469983-44470002 Msa1156210:intron 30.0%
TACTTCAAAACAAACCAATC+CGG + chr7_4:44470005-44470024 None:intergenic 30.0%
!!! GTTTGTTTTGAAGTATCACT+TGG - chr7_4:44470010-44470029 Msa1156210:intron 30.0%
AAAGAGATTAGAGAATCATC+TGG - chr7_4:44470093-44470112 Msa1156210:intron 30.0%
ATCATCTGGTCTACAATTAT+TGG - chr7_4:44470107-44470126 Msa1156210:intron 30.0%
GTATAGATATTACTGCATGT+CGG + chr7_4:44470313-44470332 None:intergenic 30.0%
! CTTTTAAATGCCTTAAGAAC+TGG - chr7_4:44470368-44470387 Msa1156210:CDS 30.0%
ACCTACATTCATTGTAATGA+AGG + chr7_4:44470663-44470682 None:intergenic 30.0%
ATTACAATGAATGTAGGTTG+AGG - chr7_4:44470665-44470684 Msa1156210:intron 30.0%
! AAATGGAATCCGTTGATAAA+GGG - chr7_4:44470718-44470737 Msa1156210:intron 30.0%
TTCATAAAGCCCTTTATCAA+CGG + chr7_4:44470730-44470749 None:intergenic 30.0%
!!! AATTTTTTACCTCTAGGGAT+AGG + chr7_4:44470940-44470959 None:intergenic 30.0%
GATATATTATACGGGTAGAA+CGG - chr7_4:44470968-44470987 Msa1156210:CDS 30.0%
! CAACATTTTTAAACTTCTCC+AGG - chr7_4:44471095-44471114 Msa1156210:CDS 30.0%
CTGTCATAAGCATTTAAATC+TGG - chr7_4:44471161-44471180 Msa1156210:CDS 30.0%
!! AAGACCTTTGGAATTAAAAG+GGG + chr7_4:44471638-44471657 None:intergenic 30.0%
!! GAAGACCTTTGGAATTAAAA+GGG + chr7_4:44471639-44471658 None:intergenic 30.0%
!! TCTGTGCATTTGATAATGAA+AGG + chr7_4:44471712-44471731 None:intergenic 30.0%
TCAACATTCAAAGATTCTTC+TGG + chr7_4:44471809-44471828 None:intergenic 30.0%
GAAGAATAAAAACAGAGCAA+AGG + chr7_4:44471972-44471991 None:intergenic 30.0%
!! TTTTTATTCTTCTGAAAGGG+AGG - chr7_4:44471980-44471999 Msa1156210:intron 30.0%
GATTTAATAACCTTCTCTAC+AGG - chr7_4:44472056-44472075 Msa1156210:intron 30.0%
GTGTTAGTATGGATCTAATT+CGG - chr7_4:44472167-44472186 Msa1156210:intron 30.0%
ACTGAATTTAAACAGATTCG+AGG - chr7_4:44472332-44472351 Msa1156210:intron 30.0%
CTGAATTTAAACAGATTCGA+GGG - chr7_4:44472333-44472352 Msa1156210:intron 30.0%
TGAATTTAAACAGATTCGAG+GGG - chr7_4:44472334-44472353 Msa1156210:intron 30.0%
! ACATCCTTTACTAGTTTGTA+TGG + chr7_4:44472410-44472429 None:intergenic 30.0%
TAGTAAAGGATGTAAGAACA+GGG - chr7_4:44472417-44472436 Msa1156210:CDS 30.0%
TTGAGGTAAGATTTGATGAA+GGG + chr7_4:44472488-44472507 None:intergenic 30.0%
! TTTGAGGTAAGATTTGATGA+AGG + chr7_4:44472489-44472508 None:intergenic 30.0%
TCATACTATACTTGTGTTTG+AGG + chr7_4:44472505-44472524 None:intergenic 30.0%
GGAAATTGTGGAATGAGAAA+TGG + chr7_4:44468741-44468760 None:intergenic 35.0%
AATAGAATCGAAACAGTACC+AGG + chr7_4:44468849-44468868 None:intergenic 35.0%
ATTCATACACCAATCATAGC+CGG - chr7_4:44469117-44469136 Msa1156210:intron 35.0%
TTGTACTGAACAGTGTATTG+TGG + chr7_4:44469218-44469237 None:intergenic 35.0%
!! AACTATGGGGAAGTACTTAA+GGG - chr7_4:44469490-44469509 Msa1156210:intron 35.0%
TGTTTGGATTGAGTTTAGGA+GGG - chr7_4:44469515-44469534 Msa1156210:intron 35.0%
GTGGTCTATATCATTCCTTA+AGG + chr7_4:44469737-44469756 None:intergenic 35.0%
! TTGCAGATTTTTATTCGCTG+AGG - chr7_4:44470040-44470059 Msa1156210:intron 35.0%
! AGATTTTTATTCGCTGAGGA+AGG - chr7_4:44470044-44470063 Msa1156210:intron 35.0%
CTTTCTTGCACTTAATTAGC+AGG + chr7_4:44470462-44470481 None:intergenic 35.0%
TAGCCATGTTTATAAGTCTG+CGG + chr7_4:44470523-44470542 None:intergenic 35.0%
GATTGGTATAAGTGAAGAAG+TGG + chr7_4:44470621-44470640 None:intergenic 35.0%
ATAGTGGCACATGATTAGAT+TGG + chr7_4:44470638-44470657 None:intergenic 35.0%
! AATCTAATCATGTGCCACTA+TGG - chr7_4:44470637-44470656 Msa1156210:intron 35.0%
GCCTTCATTACAATGAATGT+AGG - chr7_4:44470659-44470678 Msa1156210:intron 35.0%
AACAATAGTTATGCTGACAG+AGG - chr7_4:44470695-44470714 Msa1156210:intron 35.0%
! GAAATGGAATCCGTTGATAA+AGG - chr7_4:44470717-44470736 Msa1156210:intron 35.0%
GTAAATAGCTATCCATGTAC+AGG - chr7_4:44470885-44470904 Msa1156210:intron 35.0%
ATTATGGTAACACCTGTACA+TGG + chr7_4:44470900-44470919 None:intergenic 35.0%
! TTTTTCATTCCTATCCCTAG+AGG - chr7_4:44470928-44470947 Msa1156210:intron 35.0%
TGAACAAATTTCAGAAAGCC+TGG + chr7_4:44471116-44471135 None:intergenic 35.0%
CTTGGAATATGAGTACTTTG+TGG - chr7_4:44471383-44471402 Msa1156210:intron 35.0%
TTCTTAGGATGTATGTGAGA+TGG - chr7_4:44471464-44471483 Msa1156210:intron 35.0%
TCTTAGGATGTATGTGAGAT+GGG - chr7_4:44471465-44471484 Msa1156210:intron 35.0%
ACAAATACCCATACGCATAA+CGG + chr7_4:44471579-44471598 None:intergenic 35.0%
!! CAATCCCCTTTTAATTCCAA+AGG - chr7_4:44471631-44471650 Msa1156210:intron 35.0%
!! CGAAGACCTTTGGAATTAAA+AGG + chr7_4:44471640-44471659 None:intergenic 35.0%
! TTTGAACAGACAAGCTTTTC+TGG - chr7_4:44471761-44471780 Msa1156210:intron 35.0%
! AAAGATTCTTCTGGAAGAAG+AGG + chr7_4:44471800-44471819 None:intergenic 35.0%
GAATGTTGAAATTCCAGAAG+AGG - chr7_4:44471820-44471839 Msa1156210:intron 35.0%
TGGGATATGTGTAATTCGAA+CGG + chr7_4:44471912-44471931 None:intergenic 35.0%
ATAACAGAAACCTGTAGAGA+AGG + chr7_4:44472069-44472088 None:intergenic 35.0%
CCATACTAACACAAAAGAAG+TGG + chr7_4:44472159-44472178 None:intergenic 35.0%
! CCACTTCTTTTGTGTTAGTA+TGG - chr7_4:44472156-44472175 Msa1156210:intron 35.0%
! CCTTTACTAGTTTGTATGGA+TGG + chr7_4:44472406-44472425 None:intergenic 35.0%
CCATCCATACAAACTAGTAA+AGG - chr7_4:44472403-44472422 Msa1156210:CDS 35.0%
CTAGTAAAGGATGTAAGAAC+AGG - chr7_4:44472416-44472435 Msa1156210:CDS 35.0%
AGTATGACAATGTCTACAAG+TGG - chr7_4:44472518-44472537 Msa1156210:CDS 35.0%
GTATGACAATGTCTACAAGT+GGG - chr7_4:44472519-44472538 Msa1156210:CDS 35.0%
TATGACAATGTCTACAAGTG+GGG - chr7_4:44472520-44472539 Msa1156210:CDS 35.0%
TTCATTCCGGATATGGTTAG+TGG + chr7_4:44468565-44468584 None:intergenic 40.0%
AGTTCAGTTCATTCCGGATA+TGG + chr7_4:44468572-44468591 None:intergenic 40.0%
TCACTCAGTTCAGTTCATTC+CGG + chr7_4:44468578-44468597 None:intergenic 40.0%
!! AAAGATTTTGGCGGTTACAG+TGG + chr7_4:44468703-44468722 None:intergenic 40.0%
CTGTAACCGCCAAAATCTTT+AGG - chr7_4:44468703-44468722 Msa1156210:CDS 40.0%
GAAGAAGAAGAGGGAAATTG+TGG + chr7_4:44468753-44468772 None:intergenic 40.0%
TGTGGTGAAGAAGAAGAAGA+GGG + chr7_4:44468762-44468781 None:intergenic 40.0%
ATGTGGTGAAGAAGAAGAAG+AGG + chr7_4:44468763-44468782 None:intergenic 40.0%
AGAATCAATTGAGCAGCGTT+GGG - chr7_4:44468967-44468986 Msa1156210:intron 40.0%
! ATAACATCACCGGCTATGAT+TGG + chr7_4:44469129-44469148 None:intergenic 40.0%
!! CAACTATGGGGAAGTACTTA+AGG - chr7_4:44469489-44469508 Msa1156210:intron 40.0%
! GAAGTACTTAAGGGTGTGTT+TGG - chr7_4:44469499-44469518 Msa1156210:intron 40.0%
GGTGTGTTTGGATTGAGTTT+AGG - chr7_4:44469511-44469530 Msa1156210:intron 40.0%
GTGTTTGGATTGAGTTTAGG+AGG - chr7_4:44469514-44469533 Msa1156210:intron 40.0%
GTTTGGATTGAGTTTAGGAG+GGG - chr7_4:44469516-44469535 Msa1156210:intron 40.0%
TGTGTTTGGATGGAGGATTT+AGG + chr7_4:44469713-44469732 None:intergenic 40.0%
! TCATTCCTTAAGGGTGTGTT+TGG + chr7_4:44469727-44469746 None:intergenic 40.0%
!! TGCACATTGGTGTTATCATG+AGG - chr7_4:44469861-44469880 Msa1156210:intron 40.0%
TACAAAAGGGAGAGAGAAAC+AGG + chr7_4:44469918-44469937 None:intergenic 40.0%
GTATCGGGTGAATCAATTAG+AGG - chr7_4:44469960-44469979 Msa1156210:intron 40.0%
CGCTAAAATCAATTCCGGAT+TGG - chr7_4:44469988-44470007 Msa1156210:intron 40.0%
! AAGCATCTTGTAGCTCCTTT+TGG - chr7_4:44470157-44470176 Msa1156210:intron 40.0%
! AGCATCTTGTAGCTCCTTTT+GGG - chr7_4:44470158-44470177 Msa1156210:intron 40.0%
TCAACAGACTCTTTCGACAT+TGG - chr7_4:44470197-44470216 Msa1156210:intron 40.0%
GCTCAATGACTACAAAACTC+AGG - chr7_4:44470245-44470264 Msa1156210:intron 40.0%
ATCTTTACGGCCAGTTCTTA+AGG + chr7_4:44470381-44470400 None:intergenic 40.0%
!!! TGCGGGTGGCTATTTTTATT+TGG + chr7_4:44470505-44470524 None:intergenic 40.0%
AGCCATGTTTATAAGTCTGC+GGG + chr7_4:44470522-44470541 None:intergenic 40.0%
!! GATAGATTTGTTGTACACCG+TGG + chr7_4:44470564-44470583 None:intergenic 40.0%
CATTGTAATGAAGGCCATAG+TGG + chr7_4:44470654-44470673 None:intergenic 40.0%
AGTTATGCTGACAGAGGAAA+TGG - chr7_4:44470701-44470720 Msa1156210:intron 40.0%
GCTGTTATCTCTATTACAGC+AGG - chr7_4:44470840-44470859 Msa1156210:intron 40.0%
TATCTCTATTACAGCAGGTG+CGG - chr7_4:44470845-44470864 Msa1156210:intron 40.0%
ATATTATACGGGTAGAACGG+AGG - chr7_4:44470971-44470990 Msa1156210:CDS 40.0%
GAACTTGTAAGTTGTATGCC+AGG - chr7_4:44470993-44471012 Msa1156210:CDS 40.0%
! AGCTGCGTGAATTTTTACTC+AGG + chr7_4:44471049-44471068 None:intergenic 40.0%
ATGAGTGCACTTGTAGTATG+TGG - chr7_4:44471184-44471203 Msa1156210:intron 40.0%
TGAGTGCACTTGTAGTATGT+GGG - chr7_4:44471185-44471204 Msa1156210:intron 40.0%
CAACTTACTATTTCCAGTGC+AGG - chr7_4:44471426-44471445 Msa1156210:intron 40.0%
CTTAGGATGTATGTGAGATG+GGG - chr7_4:44471466-44471485 Msa1156210:intron 40.0%
ACAGAGATACAAAACCAGAG+TGG - chr7_4:44471495-44471514 Msa1156210:intron 40.0%
AAGAGATTTCTCAACCACTC+TGG + chr7_4:44471512-44471531 None:intergenic 40.0%
AGAGTGGTTGAGAAATCTCT+TGG - chr7_4:44471511-44471530 Msa1156210:intron 40.0%
AAATCTCTTGGAGAAGAAGC+TGG - chr7_4:44471523-44471542 Msa1156210:intron 40.0%
TATGCGTATGGGTATTTGTC+TGG - chr7_4:44471580-44471599 Msa1156210:intron 40.0%
ATGCGTATGGGTATTTGTCT+GGG - chr7_4:44471581-44471600 Msa1156210:intron 40.0%
AAGGAACACATCGCATTGTT+CGG - chr7_4:44471608-44471627 Msa1156210:intron 40.0%
TAATTCCAAAGGTCTTCGTC+AGG - chr7_4:44471642-44471661 Msa1156210:intron 40.0%
TATTACCTGACGAAGACCTT+TGG + chr7_4:44471650-44471669 None:intergenic 40.0%
TGAAATTCCAGAAGAGGACT+TGG - chr7_4:44471826-44471845 Msa1156210:intron 40.0%
AGGAGGTCAGAATGTTAACA+AGG - chr7_4:44471877-44471896 Msa1156210:intron 40.0%
CGAATTACACATATCCCAAC+TGG - chr7_4:44471914-44471933 Msa1156210:intron 40.0%
ACCAGATATCACCTCTGTTA+TGG - chr7_4:44472448-44472467 Msa1156210:CDS 40.0%
TCCATAACAGAGGTGATATC+TGG + chr7_4:44472452-44472471 None:intergenic 40.0%
GATATCACCTCTGTTATGGA+TGG - chr7_4:44472452-44472471 Msa1156210:CDS 40.0%
CAATTCTCCATCCATAACAG+AGG + chr7_4:44472462-44472481 None:intergenic 40.0%
CTCTGTTATGGATGGAGAAT+TGG - chr7_4:44472460-44472479 Msa1156210:CDS 40.0%
TTCCTTTACCTCCCATTCAA+TGG - chr7_4:44472555-44472574 Msa1156210:exon 40.0%
ATCGTTCCTCTCCATTGAAT+GGG + chr7_4:44472569-44472588 None:intergenic 40.0%
TATCGTTCCTCTCCATTGAA+TGG + chr7_4:44472570-44472589 None:intergenic 40.0%
TTCAATGGAGAGGAACGATA+TGG - chr7_4:44472570-44472589 Msa1156210:five_prime_UTR 40.0%
ACGATATGGTTGTTGTGTCA+TGG - chr7_4:44472584-44472603 Msa1156210:five_prime_UTR 40.0%
CGATATGGTTGTTGTGTCAT+GGG - chr7_4:44472585-44472604 Msa1156210:five_prime_UTR 40.0%
GCGTAACCACTAACCATATC+CGG - chr7_4:44468556-44468575 Msa1156210:three_prime_UTR 45.0%
GAAGCGATTCGTTTAAGCCA+TGG - chr7_4:44468644-44468663 Msa1156210:three_prime_UTR 45.0%
GTGGTGCGGAAAGATAAGAA+AGG + chr7_4:44468789-44468808 None:intergenic 45.0%
GGTGATAGAGGAAAAGGAGA+AGG + chr7_4:44468828-44468847 None:intergenic 45.0%
! TCTCCTTTTCCTCTATCACC+TGG - chr7_4:44468828-44468847 Msa1156210:CDS 45.0%
GTACCAGGTGATAGAGGAAA+AGG + chr7_4:44468834-44468853 None:intergenic 45.0%
GAAACAGTACCAGGTGATAG+AGG + chr7_4:44468840-44468859 None:intergenic 45.0%
! ACGCTGCTCAATTGATTCTC+CGG + chr7_4:44468966-44468985 None:intergenic 45.0%
GAGAATCAATTGAGCAGCGT+TGG - chr7_4:44468966-44468985 Msa1156210:intron 45.0%
GAATCAATTGAGCAGCGTTG+GGG - chr7_4:44468968-44468987 Msa1156210:intron 45.0%
CAAGCAGTTACCTTGAAGTG+CGG + chr7_4:44469024-44469043 None:intergenic 45.0%
GTGCACGTAAAACCCTTGTA+GGG - chr7_4:44469349-44469368 Msa1156210:CDS 45.0%
GCACATTAGACTCCCTACAA+GGG + chr7_4:44469364-44469383 None:intergenic 45.0%
TGCACATTAGACTCCCTACA+AGG + chr7_4:44469365-44469384 None:intergenic 45.0%
GATTGAGTTTAGGAGGGGAA+TGG - chr7_4:44469521-44469540 Msa1156210:intron 45.0%
AGTTTAGGAGGGGAATGGAA+GGG - chr7_4:44469526-44469545 Msa1156210:intron 45.0%
GATTTAGGAGGCAAAGGGAA+GGG + chr7_4:44469698-44469717 None:intergenic 45.0%
TGGAGGATTTAGGAGGCAAA+GGG + chr7_4:44469703-44469722 None:intergenic 45.0%
ATGGAGGATTTAGGAGGCAA+AGG + chr7_4:44469704-44469723 None:intergenic 45.0%
GTTTGGATGGAGGATTTAGG+AGG + chr7_4:44469710-44469729 None:intergenic 45.0%
! TTAAGGGTGTGTTTGGATGG+AGG + chr7_4:44469720-44469739 None:intergenic 45.0%
TCCATCCAAACACACCCTTA+AGG - chr7_4:44469719-44469738 Msa1156210:CDS 45.0%
! TCCTTAAGGGTGTGTTTGGA+TGG + chr7_4:44469723-44469742 None:intergenic 45.0%
CACAACACCGAGAGACTATA+GGG - chr7_4:44469754-44469773 Msa1156210:CDS 45.0%
GATACTGCCCTATAGTCTCT+CGG + chr7_4:44469764-44469783 None:intergenic 45.0%
! AGAACTTGCCAAGTTGGAAG+AGG - chr7_4:44470134-44470153 Msa1156210:intron 45.0%
AGATGCTTCCTCTTCCAACT+TGG + chr7_4:44470145-44470164 None:intergenic 45.0%
CGAAAGAGTCTGTTGAGCTT+TGG + chr7_4:44470193-44470212 None:intergenic 45.0%
CATGTTTATAAGTCTGCGGG+TGG + chr7_4:44470519-44470538 None:intergenic 45.0%
CACCCGCAGACTTATAAACA+TGG - chr7_4:44470517-44470536 Msa1156210:CDS 45.0%
CAATGTTCACGATGCTTCCA+CGG - chr7_4:44470544-44470563 Msa1156210:intron 45.0%
! GAGCTGACTCAACTTCTTTC+TGG - chr7_4:44470798-44470817 Msa1156210:intron 45.0%
TCTGGTCCTTACGACAAAGA+AGG - chr7_4:44470816-44470835 Msa1156210:intron 45.0%
ACAGCACCTTCTTTGTCGTA+AGG + chr7_4:44470825-44470844 None:intergenic 45.0%
ATCTCTATTACAGCAGGTGC+GGG - chr7_4:44470846-44470865 Msa1156210:intron 45.0%
TGTTGAGACTTGAGACAGAG+AGG + chr7_4:44471080-44471099 None:intergenic 45.0%
GTTCATAGCCACATGTGTAC+TGG - chr7_4:44471131-44471150 Msa1156210:CDS 45.0%
GTTACTTGCCAGTACACATG+TGG + chr7_4:44471142-44471161 None:intergenic 45.0%
ACTTCTCAGACTACACAGTG+CGG + chr7_4:44471318-44471337 None:intergenic 45.0%
TACTATTTCCAGTGCAGGAC+TGG - chr7_4:44471431-44471450 Msa1156210:intron 45.0%
ACTATTTCCAGTGCAGGACT+GGG - chr7_4:44471432-44471451 Msa1156210:intron 45.0%
ATAACGGCCTTCAACTTCGA+TGG + chr7_4:44471563-44471582 None:intergenic 45.0%
TTGAAGGCCGTTATGCGTAT+GGG - chr7_4:44471569-44471588 Msa1156210:intron 45.0%
TGCGTATGGGTATTTGTCTG+GGG - chr7_4:44471582-44471601 Msa1156210:intron 45.0%
CTAATCTCCAAGTCCTCTTC+TGG + chr7_4:44471836-44471855 None:intergenic 45.0%
!! GGAGATTAGCTTCTCAAGAG+CGG - chr7_4:44471847-44471866 Msa1156210:intron 45.0%
!! GAGATTAGCTTCTCAAGAGC+GGG - chr7_4:44471848-44471867 Msa1156210:intron 45.0%
GCACAAGCACAATTGCAGTT+TGG + chr7_4:44472224-44472243 None:intergenic 45.0%
TCGTTTGAAAGCGAAGCTGT+TGG - chr7_4:44472286-44472305 Msa1156210:intron 45.0%
CTCCATTGAATGGGAGGTAA+AGG + chr7_4:44472560-44472579 None:intergenic 45.0%
TTACCTCCCATTCAATGGAG+AGG - chr7_4:44472560-44472579 Msa1156210:exon 45.0%
GCGATTCGTTTAAGCCATGG+AGG - chr7_4:44468647-44468666 Msa1156210:three_prime_UTR 50.0%
AGGGTGTGAAACAACCTCCA+TGG + chr7_4:44468664-44468683 None:intergenic 50.0%
TGGTGTAGTAGCAGCACAGA+GGG + chr7_4:44468683-44468702 None:intergenic 50.0%
AGAAGGACGATGAGAGAGAG+TGG + chr7_4:44468811-44468830 None:intergenic 50.0%
! AGTAGTTCTGTTTGCGACGC+CGG - chr7_4:44468944-44468963 Msa1156210:CDS 50.0%
! AATTGAGCAGCGTTGGGGAA+GGG - chr7_4:44468973-44468992 Msa1156210:intron 50.0%
ACAAGCGATTCCGCACTTCA+AGG - chr7_4:44469011-44469030 Msa1156210:intron 50.0%
CGTGCACGTAAAACCCTTGT+AGG - chr7_4:44469348-44469367 Msa1156210:CDS 50.0%
GAGTTTAGGAGGGGAATGGA+AGG - chr7_4:44469525-44469544 Msa1156210:intron 50.0%
GGATTTAGGAGGCAAAGGGA+AGG + chr7_4:44469699-44469718 None:intergenic 50.0%
!! CCTATAGTCTCTCGGTGTTG+TGG + chr7_4:44469756-44469775 None:intergenic 50.0%
CCACAACACCGAGAGACTAT+AGG - chr7_4:44469753-44469772 Msa1156210:CDS 50.0%
GGAGCAAGAACTTGCCAAGT+TGG - chr7_4:44470128-44470147 Msa1156210:intron 50.0%
! GAGTCTGTTGAGCTTTGGCT+CGG + chr7_4:44470188-44470207 None:intergenic 50.0%
CTTCTCAGACTACACAGTGC+GGG + chr7_4:44471317-44471336 None:intergenic 50.0%
TCTGCCACCATCGAAGTTGA+AGG - chr7_4:44471553-44471572 Msa1156210:intron 50.0%
GTTGAAGGCCGTTATGCGTA+TGG - chr7_4:44471568-44471587 Msa1156210:intron 50.0%
GGGTATTTGTCTGGGGAGAA+AGG - chr7_4:44471589-44471608 Msa1156210:intron 50.0%
! ATTAGCTTCTCAAGAGCGGG+TGG - chr7_4:44471851-44471870 Msa1156210:intron 50.0%
TTCTCAAGAGCGGGTGGAAA+AGG - chr7_4:44471857-44471876 Msa1156210:intron 50.0%
AGCGAAGAGTGACACCAGTT+GGG + chr7_4:44471931-44471950 None:intergenic 50.0%
TCTGAAAGGGAGGCTTCACT+CGG - chr7_4:44471990-44472009 Msa1156210:intron 50.0%
CTGCAATTGTGCTTGTGCAG+AGG - chr7_4:44472226-44472245 Msa1156210:CDS 50.0%
GGACGTAGTGAAGGCTGAAT+GGG - chr7_4:44472355-44472374 Msa1156210:intron 50.0%
GACGTAGTGAAGGCTGAATG+GGG - chr7_4:44472356-44472375 Msa1156210:intron 50.0%
GTTCCTCTCCATTGAATGGG+AGG + chr7_4:44472566-44472585 None:intergenic 50.0%
GTGGTGTAGTAGCAGCACAG+AGG + chr7_4:44468684-44468703 None:intergenic 55.0%
! GATGAGAGAGAGTGGTGGTG+CGG + chr7_4:44468803-44468822 None:intergenic 55.0%
AGGACGATGAGAGAGAGTGG+TGG + chr7_4:44468808-44468827 None:intergenic 55.0%
! CAATTGAGCAGCGTTGGGGA+AGG - chr7_4:44468972-44468991 Msa1156210:intron 55.0%
! ATTGAGCAGCGTTGGGGAAG+GGG - chr7_4:44468974-44468993 Msa1156210:intron 55.0%
ACGTGCACTTGCACTGAGGA+CGG + chr7_4:44469331-44469350 None:intergenic 55.0%
TTAGGAGGGGAATGGAAGGG+AGG - chr7_4:44469529-44469548 Msa1156210:intron 55.0%
!! TTTGGCTCGGTCGTCCCAAA+AGG + chr7_4:44470175-44470194 None:intergenic 55.0%
TCTATTACAGCAGGTGCGGG+AGG - chr7_4:44470849-44470868 Msa1156210:intron 55.0%
ATTTCCAGTGCAGGACTGGG+CGG - chr7_4:44471435-44471454 Msa1156210:intron 55.0%
ACTGGGCGGACATGCTTCTT+AGG - chr7_4:44471449-44471468 Msa1156210:intron 55.0%
ACGGCCTTCAACTTCGATGG+TGG + chr7_4:44471560-44471579 None:intergenic 55.0%
TCAAGAGCGGGTGGAAAAGG+AGG - chr7_4:44471860-44471879 Msa1156210:intron 55.0%
CAGCGAAGAGTGACACCAGT+TGG + chr7_4:44471932-44471951 None:intergenic 55.0%
GATTCGAGGGGACGTAGTGA+AGG - chr7_4:44472346-44472365 Msa1156210:intron 55.0%
GGGACGTAGTGAAGGCTGAA+TGG - chr7_4:44472354-44472373 Msa1156210:intron 55.0%
GAGGACGGTTCTGTCGATCG+TGG + chr7_4:44469316-44469335 None:intergenic 60.0%
GTGCACGTGCACTTGCACTG+AGG + chr7_4:44469335-44469354 None:intergenic 60.0%
!! TGCGGGAGGTACTGATGCAC+AGG - chr7_4:44470863-44470882 Msa1156210:intron 60.0%
!! GGTGTCACTCTTCGCTGCAC+AGG - chr7_4:44471935-44471954 Msa1156210:intron 60.0%
ATGTCCGCCCAGTCCTGCAC+TGG + chr7_4:44471442-44471461 None:intergenic 65.0%
! GAGCAGCGTTGGGGAAGGGG+AGG - chr7_4:44468977-44468996 Msa1156210:intron 70.0%
! CAGCGTTGGGGAAGGGGAGG+AGG - chr7_4:44468980-44468999 Msa1156210:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 44468507 44472723 44468507 ID=Msa1156210;Name=Msa1156210
chr7_4 mRNA 44468507 44472723 44468507 ID=Msa1156210-mRNA-1;Parent=Msa1156210;Name=Msa1156210-mRNA-1;_AED=0.08;_eAED=0.08;_QI=156|1|1|1|1|1|7|173|468
chr7_4 exon 44468507 44468984 44468507 ID=Msa1156210-mRNA-1:exon:11375;Parent=Msa1156210-mRNA-1
chr7_4 exon 44469274 44469460 44469274 ID=Msa1156210-mRNA-1:exon:11374;Parent=Msa1156210-mRNA-1
chr7_4 exon 44469567 44469782 44469567 ID=Msa1156210-mRNA-1:exon:11373;Parent=Msa1156210-mRNA-1
chr7_4 exon 44470346 44470549 44470346 ID=Msa1156210-mRNA-1:exon:11372;Parent=Msa1156210-mRNA-1
chr7_4 exon 44470964 44471184 44470964 ID=Msa1156210-mRNA-1:exon:11371;Parent=Msa1156210-mRNA-1
chr7_4 exon 44472198 44472284 44472198 ID=Msa1156210-mRNA-1:exon:11370;Parent=Msa1156210-mRNA-1
chr7_4 exon 44472381 44472723 44472381 ID=Msa1156210-mRNA-1:exon:11369;Parent=Msa1156210-mRNA-1
chr7_4 five_prime_UTR 44472568 44472723 44472568 ID=Msa1156210-mRNA-1:five_prime_utr;Parent=Msa1156210-mRNA-1
chr7_4 CDS 44472381 44472567 44472381 ID=Msa1156210-mRNA-1:cds;Parent=Msa1156210-mRNA-1
chr7_4 CDS 44472198 44472284 44472198 ID=Msa1156210-mRNA-1:cds;Parent=Msa1156210-mRNA-1
chr7_4 CDS 44470964 44471184 44470964 ID=Msa1156210-mRNA-1:cds;Parent=Msa1156210-mRNA-1
chr7_4 CDS 44470346 44470549 44470346 ID=Msa1156210-mRNA-1:cds;Parent=Msa1156210-mRNA-1
chr7_4 CDS 44469567 44469782 44469567 ID=Msa1156210-mRNA-1:cds;Parent=Msa1156210-mRNA-1
chr7_4 CDS 44469274 44469460 44469274 ID=Msa1156210-mRNA-1:cds;Parent=Msa1156210-mRNA-1
chr7_4 CDS 44468680 44468984 44468680 ID=Msa1156210-mRNA-1:cds;Parent=Msa1156210-mRNA-1
chr7_4 three_prime_UTR 44468507 44468679 44468507 ID=Msa1156210-mRNA-1:three_prime_utr;Parent=Msa1156210-mRNA-1
Gene Sequence

>Msa1156210

ATGGAGGTTGTTTCACACCCTCTGTGCTGCTACTACACCACTGTAACCGCCAAAATCTTTAGGTCTTATAAACAACCATTTCTCATTCCACAATTTCCCTCTTCTTCTTCTTCACCACATTTTCCTTTCTTATCTTTCCGCACCACCACTCTCTCTCATCGTCCTTCTCCTTTTCCTCTATCACCTGTAGTTCTGTTTGCGACGCCGGAGAATCAATTGAGCAGCGTTGGGGAAGGGGAGGAGGATACACACACAAGCGATTCCGCACTTCAAGATTTTTATTCGCTGAGGAAGGATGTTGAAATTGCATCACAGCGTGTCAAAGAGATTAGAGAATCATCTGGTCTACAATTATTGGAGCAAGAACTTGCCAAGTTGGAAGAGGAAGCATCTTGTAGCTCCTTTTGGGACGACCGAGCCAAAGCTCAACAGACTCTTTCGACATTGGCTGATGTCAAAGAAAAGATAAAATTGCTCAATGACTACAAAACTCAGGTTGAGGATGCAGAAACAATAGTTATGCTGACAGAGGAAATGGAATCCGTTGATAAAGGGCTTTATGAAGAAGCTTCTAGTCTAATTAAAGAACTGAATAAGTCAATTGATCGGTTTGAGCTGACTCAACTTCTTTCTGGTCCTTACGACAAAGAAGGTGCTGTTATCTCTATTACAGCAGGTGCGGGAGGTACTGATGCACAGGACTGGGCGGACATGCTTCTTAGGATGTATGTGAGATGGGGTGAGAAACAGAGATACAAAACCAGAGTGGTTGAGAAATCTCTTGGAGAAGAAGCTGGAATTAAATCTGCCACCATCGAAGTTGAAGGCCGTTATGCGTATGGGTATTTGTCTGGGGAGAAAGGAACACATCGCATTGTTCGGCAATCCCCTTTTAATTCCAAAGGTCTTCGTCAGACAAGCTTTTCTGGTGTTGAAGTCATGCCTCTTCTTCCAGAAGAATCTTTGAATGTTGAAATTCCAGAAGAGGACTTGGAGATTAGCTTCTCAAGAGCGGGTGGAAAAGGAGGTCAGAATGTTAACAAGGTTGAAACTGCCGTTCGAATTACACATATCCCAACTGGTGTCACTCTTCGCTGCACAGAGGAGAGATCTCAGCTAGCAAATAAGATAAAAGCTTTAAGTCGTTTGAAAGCGAAGCTGTTGGTGATAGCTGAAGAGCAACGTGCAACTGAATTTAAACAGATTCGAGGGGACGTAGTGAAGGCTGAATGGGGACAGCAAATAAGAAATTATGTCTTCCATCCATACAAACTAGTAAAGGATGTAAGAACAGGGCAAGAAACACCAGATATCACCTCTGTTATGGATGGAGAATTGGATCCCTTCATCAAATCTTACCTCAAACACAAGTATAGTATGACAATGTCTACAAGTGGGGTTAACTAA

Protein sequence

>Msa1156210

MEVVSHPLCCYYTTVTAKIFRSYKQPFLIPQFPSSSSSPHFPFLSFRTTTLSHRPSPFPLSPVVLFATPENQLSSVGEGEEDTHTSDSALQDFYSLRKDVEIASQRVKEIRESSGLQLLEQELAKLEEEASCSSFWDDRAKAQQTLSTLADVKEKIKLLNDYKTQVEDAETIVMLTEEMESVDKGLYEEASSLIKELNKSIDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSATIEVEGRYAYGYLSGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEESLNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTLRCTEERSQLANKIKALSRLKAKLLVIAEEQRATEFKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVRTGQETPDITSVMDGELDPFIKSYLKHKYSMTMSTSGVN*