Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0843740 | XP_003613367.1 | 62.651 | 166 | 38 | 2 | 57 | 198 | 1 | 166 | 4.02e-54 | 198 |
| Msa0843740 | XP_003613367.1 | 85.372 | 376 | 30 | 1 | 199 | 549 | 5 | 380 | 0.0 | 661 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0843740 | G7K480 | 62.651 | 166 | 38 | 2 | 57 | 198 | 1 | 166 | 1.92e-54 | 198 |
| Msa0843740 | G7K480 | 85.372 | 376 | 30 | 1 | 199 | 549 | 5 | 380 | 0.0 | 661 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026420 | Msa0843740 | 0.803649 | 3.152184e-49 | -8.615850e-47 |
| Msa0051480 | Msa0843740 | 0.813276 | 2.778304e-51 | -8.615850e-47 |
| Msa0051620 | Msa0843740 | 0.815359 | 9.625920e-52 | -8.615850e-47 |
| Msa0051730 | Msa0843740 | 0.814805 | 1.277836e-51 | -8.615850e-47 |
| Msa0614290 | Msa0843740 | 0.801701 | 7.953469e-49 | -8.615850e-47 |
| Msa0652610 | Msa0843740 | 0.803062 | 4.170368e-49 | -8.615850e-47 |
| Msa0697520 | Msa0843740 | 0.801919 | 7.175216e-49 | -8.615850e-47 |
| Msa0727230 | Msa0843740 | 0.803980 | 2.690800e-49 | -8.615850e-47 |
| Msa0744560 | Msa0843740 | 0.819904 | 9.091161e-53 | -8.615850e-47 |
| Msa0746340 | Msa0843740 | 0.814045 | 1.881934e-51 | -8.615850e-47 |
| Msa0795320 | Msa0843740 | 0.800475 | 1.416119e-48 | -8.615850e-47 |
| Msa0806910 | Msa0843740 | 0.841426 | 4.786400e-58 | -8.615850e-47 |
| Msa0826360 | Msa0843740 | 0.813778 | 2.154402e-51 | -8.615850e-47 |
| Msa0826370 | Msa0843740 | 0.811290 | 7.539771e-51 | -8.615850e-47 |
| Msa0826380 | Msa0843740 | 0.810530 | 1.101328e-50 | -8.615850e-47 |
| Msa0826450 | Msa0843740 | 0.819983 | 8.719589e-53 | -8.615850e-47 |
| Msa0143640 | Msa0843740 | 0.834154 | 3.531350e-56 | -8.615850e-47 |
| Msa0146090 | Msa0843740 | 0.806760 | 7.034830e-50 | -8.615850e-47 |
| Msa0146200 | Msa0843740 | 0.814085 | 1.843399e-51 | -8.615850e-47 |
| Msa0185100 | Msa0843740 | 0.806230 | 9.097548e-50 | -8.615850e-47 |
| Msa0186240 | Msa0843740 | 0.805769 | 1.137556e-49 | -8.615850e-47 |
| Msa0202380 | Msa0843740 | 0.807929 | 3.974585e-50 | -8.615850e-47 |
| Msa0224210 | Msa0843740 | 0.807851 | 4.131005e-50 | -8.615850e-47 |
| Msa0390790 | Msa0843740 | 0.817825 | 2.697497e-52 | -8.615850e-47 |
| Msa0393100 | Msa0843740 | 0.800182 | 1.624928e-48 | -8.615850e-47 |
| Msa0438070 | Msa0843740 | 0.810114 | 1.353717e-50 | -8.615850e-47 |
| Msa0449620 | Msa0843740 | 0.811462 | 6.916076e-51 | -8.615850e-47 |
| Msa0478080 | Msa0843740 | 0.808174 | 3.524913e-50 | -8.615850e-47 |
| Msa0480550 | Msa0843740 | 0.821850 | 3.243236e-53 | -8.615850e-47 |
| Msa0481770 | Msa0843740 | 0.800192 | 1.617696e-48 | -8.615850e-47 |
| Msa0246140 | Msa0843740 | 0.829415 | 5.215275e-55 | -8.615850e-47 |
| Msa0254640 | Msa0843740 | 0.825024 | 5.874205e-54 | -8.615850e-47 |
| Msa0284730 | Msa0843740 | 0.825433 | 4.700710e-54 | -8.615850e-47 |
| Msa0319680 | Msa0843740 | 0.810596 | 1.065350e-50 | -8.615850e-47 |
| Msa0340370 | Msa0843740 | 0.815979 | 7.004051e-52 | -8.615850e-47 |
| Msa0500440 | Msa0843740 | 0.821021 | 5.038003e-53 | -8.615850e-47 |
| Msa0506370 | Msa0843740 | 0.817450 | 3.277126e-52 | -8.615850e-47 |
| Msa0522170 | Msa0843740 | 0.803058 | 4.178852e-49 | -8.615850e-47 |
| Msa0560280 | Msa0843740 | 0.803763 | 2.985101e-49 | -8.615850e-47 |
| Msa0561110 | Msa0843740 | 0.817467 | 3.248960e-52 | -8.615850e-47 |
| Msa0580840 | Msa0843740 | 0.826735 | 2.305084e-54 | -8.615850e-47 |
| Msa0593600 | Msa0843740 | 0.803223 | 3.861716e-49 | -8.615850e-47 |
| Msa0843740 | Msa0865810 | 0.822640 | 2.126390e-53 | -8.615850e-47 |
| Msa0843740 | Msa0865830 | 0.814030 | 1.895941e-51 | -8.615850e-47 |
| Msa0843740 | Msa0921790 | 0.816405 | 5.625615e-52 | -8.615850e-47 |
| Msa0843740 | Msa0945320 | 0.800088 | 1.697815e-48 | -8.615850e-47 |
| Msa0843740 | Msa0960580 | 0.821638 | 3.630978e-53 | -8.615850e-47 |
| Msa0843740 | Msa1064240 | 0.802856 | 4.599196e-49 | -8.615850e-47 |
| Msa0843740 | Msa1150750 | 0.815925 | 7.199759e-52 | -8.615850e-47 |
| Msa0843740 | Msa1154240 | 0.815927 | 7.194702e-52 | -8.615850e-47 |
| Msa0843740 | Msa1174280 | 0.813158 | 2.949080e-51 | -8.615850e-47 |
| Msa0843740 | Msa1202110 | 0.802988 | 4.319271e-49 | -8.615850e-47 |
| Msa0843740 | Msa1211610 | 0.818686 | 1.721780e-52 | -8.615850e-47 |
| Msa0843740 | Msa1223560 | 0.807681 | 4.488270e-50 | -8.615850e-47 |
| Msa0843740 | Msa1224510 | 0.812231 | 4.704336e-51 | -8.615850e-47 |
| Msa0843740 | Msa1254870 | 0.803482 | 3.413749e-49 | -8.615850e-47 |
| Msa0843740 | Msa1263500 | 0.804727 | 1.880074e-49 | -8.615850e-47 |
| Msa0843740 | Msa1299480 | 0.821709 | 3.496106e-53 | -8.615850e-47 |
| Msa0843740 | Msa1322180 | 0.834506 | 2.881171e-56 | -8.615850e-47 |
| Msa0843740 | Msa1328430 | 0.802105 | 6.567873e-49 | -8.615850e-47 |
| Msa0843740 | Msa1333700 | 0.809643 | 1.709948e-50 | -8.615850e-47 |
| Msa0843740 | Msa1349830 | 0.833783 | 4.373172e-56 | -8.615850e-47 |
| Msa0843740 | Msa1387610 | 0.805163 | 1.524429e-49 | -8.615850e-47 |
| Msa0843740 | Msa1398120 | 0.812001 | 5.279397e-51 | -8.615850e-47 |
| Msa0843740 | Msa1449470 | 0.810434 | 1.154760e-50 | -8.615850e-47 |
| Msa0843740 | Msa1453600 | 0.801948 | 7.077220e-49 | -8.615850e-47 |
| Msa0843740 | Msa1459920 | 0.818922 | 1.521909e-52 | -8.615850e-47 |
| Msa0843740 | Msa1459930 | 0.813612 | 2.343822e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0843740 | MtrunA17_Chr5g0414461 | 85.372 | 376 | 30 | 1 | 199 | 549 | 5 | 380 | 0.0 | 661 |
| Msa0843740 | MtrunA17_Chr5g0414461 | 62.651 | 166 | 38 | 2 | 57 | 198 | 1 | 166 | 3.70e-58 | 198 |
| Msa0843740 | MtrunA17_Chr5g0414371 | 71.200 | 375 | 80 | 2 | 199 | 547 | 5 | 377 | 0.0 | 531 |
| Msa0843740 | MtrunA17_Chr5g0414371 | 74.251 | 167 | 18 | 1 | 57 | 198 | 1 | 167 | 2.61e-76 | 246 |
| Msa0843740 | MtrunA17_Chr5g0414421 | 69.271 | 384 | 83 | 2 | 199 | 549 | 35 | 416 | 0.0 | 525 |
| Msa0843740 | MtrunA17_Chr5g0414421 | 69.634 | 191 | 26 | 1 | 40 | 198 | 14 | 204 | 4.05e-81 | 259 |
| Msa0843740 | MtrunA17_Chr5g0414441 | 68.831 | 385 | 84 | 4 | 199 | 549 | 5 | 387 | 1.11e-178 | 508 |
| Msa0843740 | MtrunA17_Chr5g0414441 | 72.000 | 175 | 16 | 1 | 57 | 198 | 1 | 175 | 3.51e-76 | 246 |
| Msa0843740 | MtrunA17_Chr5g0414391 | 68.170 | 377 | 94 | 3 | 199 | 549 | 5 | 381 | 4.95e-176 | 501 |
| Msa0843740 | MtrunA17_Chr5g0414391 | 72.455 | 167 | 21 | 1 | 57 | 198 | 1 | 167 | 6.85e-75 | 242 |
| Msa0843740 | MtrunA17_Chr0c01g0489311 | 44.444 | 396 | 174 | 9 | 199 | 549 | 5 | 399 | 1.38e-93 | 291 |
| Msa0843740 | MtrunA17_Chr0c01g0489311 | 42.222 | 180 | 63 | 5 | 57 | 198 | 1 | 177 | 1.28e-27 | 115 |
| Msa0843740 | MtrunA17_Chr6g0456421 | 37.531 | 397 | 199 | 9 | 199 | 549 | 5 | 398 | 7.72e-71 | 232 |
| Msa0843740 | MtrunA17_Chr6g0456421 | 40.805 | 174 | 68 | 5 | 57 | 198 | 1 | 171 | 1.51e-25 | 108 |
| Msa0843740 | MtrunA17_Chr5g0414451 | 62.887 | 97 | 36 | 0 | 284 | 380 | 3 | 99 | 2.02e-34 | 125 |
| Msa0843740 | MtrunA17_Chr5g0414451 | 92.727 | 55 | 4 | 0 | 145 | 199 | 1 | 55 | 1.80e-30 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0843740 | AT1G13510.1 | 38.817 | 389 | 187 | 13 | 199 | 549 | 5 | 380 | 1.97e-68 | 226 |
| Msa0843740 | AT1G13510.1 | 39.344 | 183 | 78 | 4 | 57 | 206 | 1 | 183 | 3.64e-30 | 122 |
| Msa0843740 | AT1G13540.1 | 40.000 | 390 | 182 | 13 | 199 | 549 | 5 | 381 | 2.72e-68 | 225 |
| Msa0843740 | AT1G13540.1 | 40.761 | 184 | 75 | 4 | 57 | 206 | 1 | 184 | 1.33e-33 | 132 |
| Msa0843740 | AT1G13530.1 | 40.256 | 390 | 181 | 12 | 201 | 549 | 7 | 385 | 1.42e-67 | 223 |
| Msa0843740 | AT1G13530.1 | 44.571 | 175 | 64 | 4 | 57 | 198 | 1 | 175 | 6.13e-35 | 135 |
| Msa0843740 | AT1G13480.1 | 37.405 | 393 | 194 | 10 | 199 | 549 | 5 | 387 | 2.82e-66 | 220 |
| Msa0843740 | AT1G13480.1 | 42.857 | 175 | 67 | 3 | 57 | 198 | 1 | 175 | 2.28e-35 | 137 |
| Msa0843740 | AT1G13490.2 | 39.276 | 387 | 190 | 10 | 199 | 549 | 5 | 382 | 1.66e-65 | 218 |
| Msa0843740 | AT1G13490.2 | 46.199 | 171 | 63 | 4 | 57 | 198 | 1 | 171 | 2.40e-34 | 134 |
| Msa0843740 | AT1G13490.1 | 40.761 | 368 | 188 | 10 | 201 | 549 | 7 | 363 | 1.08e-64 | 215 |
| Msa0843740 | AT1G13490.1 | 42.353 | 170 | 52 | 4 | 57 | 198 | 1 | 152 | 4.14e-27 | 113 |
| Msa0843740 | AT1G13550.1 | 37.340 | 391 | 192 | 11 | 199 | 546 | 5 | 385 | 3.95e-64 | 214 |
| Msa0843740 | AT1G13550.1 | 39.011 | 182 | 67 | 6 | 57 | 198 | 1 | 178 | 9.32e-24 | 103 |
| Msa0843740 | AT1G13520.1 | 38.422 | 393 | 190 | 13 | 199 | 549 | 5 | 387 | 4.65e-64 | 214 |
| Msa0843740 | AT1G13520.1 | 36.239 | 218 | 104 | 4 | 57 | 240 | 1 | 217 | 2.74e-32 | 128 |
| Msa0843740 | AT1G13470.1 | 39.796 | 392 | 177 | 17 | 199 | 549 | 5 | 378 | 4.17e-61 | 206 |
| Msa0843740 | AT1G13470.1 | 39.429 | 175 | 69 | 4 | 57 | 198 | 1 | 171 | 5.23e-27 | 113 |
| Msa0843740 | AT1G13500.1 | 39.386 | 391 | 184 | 14 | 201 | 549 | 7 | 386 | 4.25e-60 | 204 |
| Msa0843740 | AT1G13500.1 | 42.775 | 173 | 68 | 5 | 57 | 198 | 1 | 173 | 1.11e-27 | 115 |
| Msa0843740 | AT1G61600.1 | 34.293 | 417 | 208 | 10 | 199 | 549 | 5 | 421 | 4.22e-58 | 199 |
| Msa0843740 | AT1G61600.1 | 39.884 | 173 | 73 | 3 | 57 | 198 | 1 | 173 | 8.77e-27 | 113 |
Find 131 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCCTTCACAAACATAAA+AGG | 0.157226 | 5_4:-21470220 | None:intergenic |
| GAACTCCATGTGGTTTATTA+AGG | 0.164024 | 5_4:+21470041 | Msa0843740:CDS |
| CACATGAAATTAGGAGTAAA+TGG | 0.180368 | 5_4:+21470686 | Msa0843740:CDS |
| ATTACAAGATAACCGGAATT+TGG | 0.183054 | 5_4:-21469353 | None:intergenic |
| ATCACAAGATAACTTGAATT+TGG | 0.210251 | 5_4:-21467653 | None:intergenic |
| TTCAAGTTATCTTGTGATAT+TGG | 0.212889 | 5_4:+21467658 | Msa0843740:CDS |
| TTCCGGTTATCTTGTAATAT+TGG | 0.219881 | 5_4:+21469358 | Msa0843740:CDS |
| TATGTAACACTTGAACAATT+TGG | 0.238831 | 5_4:-21466870 | None:intergenic |
| AACCAGTCGTTGTTGGAAAA+TGG | 0.242561 | 5_4:+21470191 | Msa0843740:CDS |
| GCTCAGACTTTCTCTTTCTT+TGG | 0.248445 | 5_4:+21469389 | Msa0843740:CDS |
| TCAGACACTCACATGAAATT+AGG | 0.282058 | 5_4:+21470677 | Msa0843740:CDS |
| GAAAAGTGTTGGATTGAGTT+TGG | 0.299597 | 5_4:+21470465 | Msa0843740:CDS |
| GCTCAAACTTACTCTTGTTT+TGG | 0.300774 | 5_4:+21467689 | Msa0843740:CDS |
| GAAATAAGCAAGAAACGTTT+TGG | 0.310305 | 5_4:+21469989 | Msa0843740:CDS |
| GAAGGAAGGAATGCGCTTAA+AGG | 0.328414 | 5_4:+21470234 | Msa0843740:CDS |
| CTTTCTCTTTCTTTGGTTTG+TGG | 0.337260 | 5_4:+21469396 | Msa0843740:CDS |
| ATGTAACACTTGAACAATTT+GGG | 0.340960 | 5_4:-21466869 | None:intergenic |
| GCCTCAGATGGAATTCCTCC+TGG | 0.354070 | 5_4:+21468246 | Msa0843740:CDS |
| TGTGGAAGGACATTGGTATT+GGG | 0.363284 | 5_4:+21469414 | Msa0843740:CDS |
| TAAGCAGGATGGGAGTATTA+AGG | 0.379785 | 5_4:+21466780 | Msa0843740:intron |
| TCACTCAAATGGTAATTTGT+AGG | 0.387265 | 5_4:-21470094 | None:intergenic |
| CCTTTGAATTTAAGTTTGCT+TGG | 0.389776 | 5_4:-21469877 | None:intergenic |
| ACAAAAGTTGAAGAGTTTGA+TGG | 0.392275 | 5_4:+21470562 | Msa0843740:CDS |
| CTCTTTCTTTGGTTTGTGGA+AGG | 0.394596 | 5_4:+21469400 | Msa0843740:CDS |
| GACAATGGTTGATTCAATAC+TGG | 0.394738 | 5_4:-21467821 | None:intergenic |
| CCACCATCAGGTCCAAATTC+CGG | 0.397966 | 5_4:+21469341 | Msa0843740:CDS |
| GACAATGGAAAGTTGAAATC+TGG | 0.400529 | 5_4:-21470154 | None:intergenic |
| TGATGTTCAACCAAGAGCTT+TGG | 0.405293 | 5_4:+21468155 | Msa0843740:CDS |
| CCTTTGAACTTGTACTAGCT+TGG | 0.411881 | 5_4:-21468092 | None:intergenic |
| ATCCAATATTACAAGATAAC+CGG | 0.416469 | 5_4:-21469360 | None:intergenic |
| TTGTGGAAGGACATTGGTAT+TGG | 0.416602 | 5_4:+21469413 | Msa0843740:CDS |
| AACTCCATGTGGTTTATTAA+GGG | 0.417012 | 5_4:+21470042 | Msa0843740:CDS |
| GAAAGGTTTGGATGGAATGC+TGG | 0.429285 | 5_4:+21470517 | Msa0843740:CDS |
| GACTGGTTCAAAACGATCAT+TGG | 0.431072 | 5_4:-21470176 | None:intergenic |
| AAGCTAAGGCTTCACTCAAA+TGG | 0.431669 | 5_4:-21470105 | None:intergenic |
| CTTCCTTCACAAACATAAAA+GGG | 0.432014 | 5_4:-21470219 | None:intergenic |
| GAATGAACATAGCTTCTTCA+TGG | 0.436065 | 5_4:-21467799 | None:intergenic |
| AAATGGGAACAAGAAAGGTT+TGG | 0.437035 | 5_4:+21470505 | Msa0843740:CDS |
| GCCCTTCAATGATTATCAAC+AGG | 0.448229 | 5_4:+21468179 | Msa0843740:CDS |
| CTATCAGACACACCACCATC+AGG | 0.449322 | 5_4:+21467629 | Msa0843740:CDS |
| GACTCCTTTCCATGTACAAA+AGG | 0.456814 | 5_4:+21469294 | Msa0843740:intron |
| GCCGAGTCGGTTGCCTCGGA+TGG | 0.459163 | 5_4:+21470019 | Msa0843740:CDS |
| AGTTGACGCTCGAGCAAAGA+TGG | 0.461286 | 5_4:+21470284 | Msa0843740:CDS |
| AGAAGGAAGGGGAAATATCA+AGG | 0.463926 | 5_4:+21467866 | Msa0843740:CDS |
| AAATGTTTGTTCTGAGGGAA+AGG | 0.464248 | 5_4:-21469443 | None:intergenic |
| GATGAAAATAGATTGGTTGA+TGG | 0.465731 | 5_4:+21470415 | Msa0843740:CDS |
| TCATGCCGAGTCGGTTGCCT+CGG | 0.465997 | 5_4:+21470015 | Msa0843740:CDS |
| TACCTGTTGATAATCATTGA+AGG | 0.466990 | 5_4:-21468181 | None:intergenic |
| AATGCGCTTAAAGGAACAAA+TGG | 0.468556 | 5_4:+21470243 | Msa0843740:CDS |
| AGCACTTGCTGGTAGAGTTA+AGG | 0.471852 | 5_4:-21466903 | None:intergenic |
| TTGAAGGGCTCCAAAGCTCT+TGG | 0.473283 | 5_4:-21468165 | None:intergenic |
| GAATTCCTCCTGGGTTATTG+AGG | 0.475186 | 5_4:+21468256 | Msa0843740:CDS |
| AGTTCTTGAAAGCATGGAAA+TGG | 0.475618 | 5_4:+21466834 | Msa0843740:CDS |
| GATTGGTTGATGGAGTGTTA+TGG | 0.478512 | 5_4:+21470425 | Msa0843740:CDS |
| AGTGTTGAAGAGAAAAGTGT+TGG | 0.479275 | 5_4:+21470454 | Msa0843740:CDS |
| GTTTGGATGGAATGCTGGGA+AGG | 0.480324 | 5_4:+21470522 | Msa0843740:CDS |
| CAAGGAATCATTTGAAGCTA+AGG | 0.480669 | 5_4:-21470119 | None:intergenic |
| CTTTCAGATCCACCACCATC+AGG | 0.493605 | 5_4:+21469329 | Msa0843740:CDS |
| TAGTACAAGTTCAAAGGAAG+AGG | 0.499206 | 5_4:+21468098 | Msa0843740:CDS |
| GAATGAAATGGGAACAAGAA+AGG | 0.502774 | 5_4:+21470500 | Msa0843740:CDS |
| AAAGAGAATGGATAGAAGAA+TGG | 0.506573 | 5_4:+21470639 | Msa0843740:CDS |
| ATCGCTACTATGTTATAAGA+AGG | 0.507064 | 5_4:+21467849 | Msa0843740:CDS |
| AGGAACCGCTGCATCGGTAA+AGG | 0.507102 | 5_4:+21466811 | Msa0843740:CDS |
| TTTGGATGGAATGCTGGGAA+GGG | 0.507438 | 5_4:+21470523 | Msa0843740:CDS |
| GCAAAATCAGTTGCCTCAGA+TGG | 0.507539 | 5_4:+21468234 | Msa0843740:CDS |
| ACATGAAATTAGGAGTAAAT+GGG | 0.511504 | 5_4:+21470687 | Msa0843740:CDS |
| AATTTGTTGATAATGATTGA+AGG | 0.512989 | 5_4:-21469966 | None:intergenic |
| AATGTTTGTTCTGAGGGAAA+GGG | 0.516697 | 5_4:-21469442 | None:intergenic |
| ATCTGGTAGCTTAGAACGCA+AGG | 0.519737 | 5_4:-21470137 | None:intergenic |
| CCAAGCTAGTACAAGTTCAA+AGG | 0.520879 | 5_4:+21468092 | Msa0843740:CDS |
| CTACTATGTTATAAGAAGGA+AGG | 0.522008 | 5_4:+21467853 | Msa0843740:CDS |
| TTTGGTTTGTGGAAGGACAT+TGG | 0.522019 | 5_4:+21469407 | Msa0843740:CDS |
| CCTCAGATGGAATTCCTCCT+GGG | 0.522046 | 5_4:+21468247 | Msa0843740:CDS |
| ATTTGTTGATAATGATTGAA+GGG | 0.523333 | 5_4:-21469965 | None:intergenic |
| TGATATTAAAACAAGTCCCT+TGG | 0.523624 | 5_4:+21469940 | Msa0843740:CDS |
| GGGAACAAGAAAGGTTTGGA+TGG | 0.524181 | 5_4:+21470509 | Msa0843740:CDS |
| AGTTGTTGAAGGAATGAAAT+GGG | 0.530901 | 5_4:+21470489 | Msa0843740:CDS |
| TACTATGTTATAAGAAGGAA+GGG | 0.531189 | 5_4:+21467854 | Msa0843740:CDS |
| CTGAACTGTATAAGCAGGAT+GGG | 0.532769 | 5_4:+21466770 | Msa0843740:intron |
| CCAAGCAAACTTAAATTCAA+AGG | 0.533386 | 5_4:+21469877 | Msa0843740:CDS |
| AGTTTGATGGAACAAACAAA+TGG | 0.536388 | 5_4:+21470575 | Msa0843740:CDS |
| GAACATAGCTTCTTCATGGC+GGG | 0.536859 | 5_4:-21467795 | None:intergenic |
| TTATCTTGTGATATTGGATG+AGG | 0.537375 | 5_4:+21467664 | Msa0843740:CDS |
| GAAATTTAGTTGTTATGTGT+TGG | 0.537435 | 5_4:+21470600 | Msa0843740:CDS |
| ACTCCATGTGGTTTATTAAG+GGG | 0.540905 | 5_4:+21470043 | Msa0843740:CDS |
| TCAGACAGAAGTTGCTAAGG+TGG | 0.543470 | 5_4:+21470372 | Msa0843740:CDS |
| TGGTTAAATGTTTGTTCTGA+GGG | 0.543646 | 5_4:-21469448 | None:intergenic |
| TCCCTCAGGAACCGCTGCAT+CGG | 0.543864 | 5_4:+21466805 | Msa0843740:CDS |
| ACCTGTTGATAATCATTGAA+GGG | 0.546054 | 5_4:-21468180 | None:intergenic |
| TACCGATGCAGCGGTTCCTG+AGG | 0.548069 | 5_4:-21466807 | None:intergenic |
| TATTCAGACAGAAGTTGCTA+AGG | 0.549658 | 5_4:+21470369 | Msa0843740:CDS |
| TTGAGTTTGGAAGTTGTTGA+AGG | 0.550114 | 5_4:+21470478 | Msa0843740:CDS |
| TAACTTGAATTTGGCCCTGA+TGG | 0.553073 | 5_4:-21467644 | None:intergenic |
| GTTTATTAAGGGGAAAAGTG+TGG | 0.559295 | 5_4:+21470053 | Msa0843740:CDS |
| GGTGGATCTGAAAGAGCACT+AGG | 0.560326 | 5_4:-21469320 | None:intergenic |
| TCCATCCGAGGCAACCGACT+CGG | 0.560667 | 5_4:-21470020 | None:intergenic |
| AAAGGTTTGGATGGAATGCT+GGG | 0.561735 | 5_4:+21470518 | Msa0843740:CDS |
| ACCGATGCAGCGGTTCCTGA+GGG | 0.563348 | 5_4:-21466806 | None:intergenic |
| TAAAGGAGTTCTTGAAAGCA+TGG | 0.563931 | 5_4:+21466828 | Msa0843740:CDS |
| AGTTGCTAAGGTGGAAGGAA+AGG | 0.568883 | 5_4:+21470381 | Msa0843740:CDS |
| AAGTTGTTGAAGGAATGAAA+TGG | 0.568887 | 5_4:+21470488 | Msa0843740:CDS |
| TCTGAACTGTATAAGCAGGA+TGG | 0.571042 | 5_4:+21466769 | Msa0843740:intron |
| ACAGAAGTTGCTAAGGTGGA+AGG | 0.571748 | 5_4:+21470376 | Msa0843740:CDS |
| ATGGTTAAATGTTTGTTCTG+AGG | 0.571762 | 5_4:-21469449 | None:intergenic |
| AATTCAAAGGAAGAAGACAT+TGG | 0.573153 | 5_4:+21469890 | Msa0843740:CDS |
| GGAGTATTAAGGACTCCCTC+AGG | 0.583577 | 5_4:+21466791 | Msa0843740:CDS |
| CATAGCTTCTTCATGGCGGG+TGG | 0.584589 | 5_4:-21467792 | None:intergenic |
| CAAATGGTAATTTGTAGGAG+TGG | 0.588994 | 5_4:-21470089 | None:intergenic |
| TAACCGGAATTTGGACCTGA+TGG | 0.589112 | 5_4:-21469344 | None:intergenic |
| ATAATGATTGAAGGGCTCCA+AGG | 0.592883 | 5_4:-21469957 | None:intergenic |
| GTTGACGCTCGAGCAAAGAT+GGG | 0.596375 | 5_4:+21470285 | Msa0843740:CDS |
| TAATGATTGAAGGGCTCCAA+GGG | 0.597144 | 5_4:-21469956 | None:intergenic |
| GAAGGAAGGGGAAATATCAA+GGG | 0.603366 | 5_4:+21467867 | Msa0843740:CDS |
| TCTACCTTCAAAATCACTGA+TGG | 0.603895 | 5_4:-21469468 | None:intergenic |
| CCCAGGAGGAATTCCATCTG+AGG | 0.605151 | 5_4:-21468247 | None:intergenic |
| CTTGAATTTGGCCCTGATGG+TGG | 0.608619 | 5_4:-21467641 | None:intergenic |
| GAATTTGGACCTGATGGTGG+TGG | 0.611269 | 5_4:-21469338 | None:intergenic |
| AGTACAAGTTCAAAGGAAGA+GGG | 0.618936 | 5_4:+21468099 | Msa0843740:CDS |
| TTTCCCCTTAATAAACCACA+TGG | 0.619760 | 5_4:-21470046 | None:intergenic |
| TCAAAACGATCATTGGACAA+TGG | 0.630976 | 5_4:-21470169 | None:intergenic |
| GCCTCGGATGGAACTCCATG+TGG | 0.631597 | 5_4:+21470031 | Msa0843740:CDS |
| GAACTCCTTTACCGATGCAG+CGG | 0.637351 | 5_4:-21466816 | None:intergenic |
| TATCAGACACACCACCATCA+GGG | 0.642787 | 5_4:+21467630 | Msa0843740:CDS |
| GGTGTGTCTGATAGAGCACT+AGG | 0.652816 | 5_4:-21467620 | None:intergenic |
| TAGTAGCGATTCGAAGACAA+TGG | 0.670254 | 5_4:-21467836 | None:intergenic |
| GTGGATCTGAAAGAGCACTA+GGG | 0.671016 | 5_4:-21469319 | None:intergenic |
| TGAACATAGCTTCTTCATGG+CGG | 0.672652 | 5_4:-21467796 | None:intergenic |
| ACTATGTTATAAGAAGGAAG+GGG | 0.681475 | 5_4:+21467855 | Msa0843740:CDS |
| ACCACATGGAGTTCCATCCG+AGG | 0.683241 | 5_4:-21470032 | None:intergenic |
| AAAACTACAGCAAAAGCATG+TGG | 0.690027 | 5_4:-21468127 | None:intergenic |
| CCGGAATTTGGACCTGATGG+TGG | 0.694514 | 5_4:-21469341 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATTATATTTATAA+AGG | + | chr5_4:21466439-21466458 | Msa0843740:intron | 0.0% |
| !! | AAAAAATTTACTTTAGTAAT+TGG | + | chr5_4:21466038-21466057 | Msa0843740:intron | 10.0% |
| !! | GAAATTAATTAGTATAAAAA+TGG | - | chr5_4:21466474-21466493 | None:intergenic | 10.0% |
| !!! | TATTACAAGTTTTTTTTTTT+TGG | - | chr5_4:21467345-21467364 | None:intergenic | 10.0% |
| !! | TATAAAAACATATAACAAAT+TGG | - | chr5_4:21468387-21468406 | None:intergenic | 10.0% |
| !! | AATAATTTCATGTAATAATT+TGG | - | chr5_4:21468501-21468520 | None:intergenic | 10.0% |
| !! | GATTTATATTGTATATATTA+TGG | + | chr5_4:21469000-21469019 | Msa0843740:intron | 10.0% |
| !! | ATTAAACTATTGAATTAAAA+AGG | + | chr5_4:21469162-21469181 | Msa0843740:intron | 10.0% |
| !!! | GTTTTTATATACTATATATT+TGG | - | chr5_4:21469220-21469239 | None:intergenic | 10.0% |
| !! | TATATAGTATATAAAAACAA+TGG | + | chr5_4:21469222-21469241 | Msa0843740:intron | 10.0% |
| !! | CATAAAAACATACTATTTAA+AGG | - | chr5_4:21466142-21466161 | None:intergenic | 15.0% |
| !! | TTATTGTGTATTCTTAATAT+TGG | + | chr5_4:21466306-21466325 | Msa0843740:intron | 15.0% |
| !!! | TAATTAATTTCGAATTTTGA+TGG | + | chr5_4:21466483-21466502 | Msa0843740:intron | 15.0% |
| !! | AAGAAATATGAAGTATATTA+AGG | + | chr5_4:21467479-21467498 | Msa0843740:intron | 15.0% |
| !!! | ATTCTTATTCAATAGTTTTA+TGG | - | chr5_4:21469090-21469109 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTAATTCCATGT+AGG | + | chr5_4:21469618-21469637 | Msa0843740:intron | 15.0% |
| !! | TTAAGTATAGTATCCTTAAA+AGG | + | chr5_4:21466228-21466247 | Msa0843740:intron | 20.0% |
| !!! | TTTTATTTTGTGTTTCTAAG+AGG | + | chr5_4:21466371-21466390 | Msa0843740:intron | 20.0% |
| !! | TTTAACCAATTGAATATTCT+AGG | + | chr5_4:21467185-21467204 | Msa0843740:intron | 20.0% |
| !!! | AGACGTAATTATATTTTTGT+TGG | + | chr5_4:21467970-21467989 | Msa0843740:intron | 20.0% |
| !! | TGGTAATTAATTAACTTTCA+TGG | + | chr5_4:21467990-21468009 | Msa0843740:intron | 20.0% |
| !! | ATAGATTCATAAAGTAATAG+TGG | + | chr5_4:21468030-21468049 | Msa0843740:intron | 20.0% |
| !! | GAAATAATCAAAAAAGGTTA+TGG | + | chr5_4:21468204-21468223 | Msa0843740:CDS | 20.0% |
| !!! | ATCTATTTTTGCTTATAACA+CGG | + | chr5_4:21468454-21468473 | Msa0843740:intron | 20.0% |
| !!! | TTCATAGAATTTTTTAGCAA+AGG | - | chr5_4:21468839-21468858 | None:intergenic | 20.0% |
| !!! | ATGAATTTTCTCTTTATGTT+TGG | + | chr5_4:21468854-21468873 | Msa0843740:intron | 20.0% |
| !! | TGACAGAAAATCTATTAAAA+TGG | + | chr5_4:21469114-21469133 | Msa0843740:intron | 20.0% |
| !!! | TATATTTGGATGAAGTTTTA+TGG | - | chr5_4:21469206-21469225 | None:intergenic | 20.0% |
| !!! | AGTTTTAAATAGAAAGTTCA+AGG | + | chr5_4:21469670-21469689 | Msa0843740:intron | 20.0% |
| !! | AATAGCTTAGTTATTATTAG+TGG | + | chr5_4:21469814-21469833 | Msa0843740:intron | 20.0% |
| !!! | TTTTAATATCATGGCTAAAA+TGG | - | chr5_4:21469931-21469950 | None:intergenic | 20.0% |
| !!! | ATTTGTTGATAATGATTGAA+GGG | - | chr5_4:21469968-21469987 | None:intergenic | 20.0% |
| !!! | AATTTGTTGATAATGATTGA+AGG | - | chr5_4:21469969-21469988 | None:intergenic | 20.0% |
| !!! | AAGTTTTGTATTAAAGAGAA+TGG | + | chr5_4:21470627-21470646 | Msa0843740:CDS | 20.0% |
| !! | AATGTTAAGTTGTTAATGAG+TGG | + | chr5_4:21466097-21466116 | Msa0843740:intron | 25.0% |
| ! | ATAAAATACCCAAAATGTAG+TGG | - | chr5_4:21466357-21466376 | None:intergenic | 25.0% |
| ! | ACTTCATTTGTAGTAAAAGA+CGG | + | chr5_4:21466654-21466673 | Msa0843740:intron | 25.0% |
| ! | ATGTAACACTTGAACAATTT+GGG | - | chr5_4:21466872-21466891 | None:intergenic | 25.0% |
| ! | TATGTAACACTTGAACAATT+TGG | - | chr5_4:21466873-21466892 | None:intergenic | 25.0% |
| !! | GTTTTCCTAGAATATTCAAT+TGG | - | chr5_4:21467193-21467212 | None:intergenic | 25.0% |
| ! | TAGGAAAACAATATTCCATT+AGG | + | chr5_4:21467204-21467223 | Msa0843740:intron | 25.0% |
| !!! | CAAGTTTTTTTTTTTTGGTC+AGG | - | chr5_4:21467340-21467359 | None:intergenic | 25.0% |
| ! | ATGGATAAATCTCATTTGTT+AGG | - | chr5_4:21467385-21467404 | None:intergenic | 25.0% |
| ! | ATCACAAGATAACTTGAATT+TGG | - | chr5_4:21467656-21467675 | None:intergenic | 25.0% |
| !! | TTCAAGTTATCTTGTGATAT+TGG | + | chr5_4:21467658-21467677 | Msa0843740:CDS | 25.0% |
| ! | TACTATGTTATAAGAAGGAA+GGG | + | chr5_4:21467854-21467873 | Msa0843740:CDS | 25.0% |
| ! | CAGGTAGAAATAATCAAAAA+AGG | + | chr5_4:21468198-21468217 | Msa0843740:CDS | 25.0% |
| ! | CAAATTGGAAAGTTGAAATT+TGG | - | chr5_4:21468372-21468391 | None:intergenic | 25.0% |
| !!! | TCTATTTTTGCTTATAACAC+GGG | + | chr5_4:21468455-21468474 | Msa0843740:intron | 25.0% |
| ! | ATCAAAGCCTTAATTATCAT+GGG | - | chr5_4:21468606-21468625 | None:intergenic | 25.0% |
| ! | TATCAAAGCCTTAATTATCA+TGG | - | chr5_4:21468607-21468626 | None:intergenic | 25.0% |
| !! | ACTAATTTTATAGCATTCAG+CGG | + | chr5_4:21468638-21468657 | Msa0843740:intron | 25.0% |
| !!! | TTTTTTAGCAAAGGAACAAA+GGG | - | chr5_4:21468830-21468849 | None:intergenic | 25.0% |
| !!! | ATTTTTTAGCAAAGGAACAA+AGG | - | chr5_4:21468831-21468850 | None:intergenic | 25.0% |
| ! | ATGGTAATTGTCAATATAGT+CGG | + | chr5_4:21469019-21469038 | Msa0843740:intron | 25.0% |
| !!! | TTTTATGGATTGATATGACA+AGG | - | chr5_4:21469075-21469094 | None:intergenic | 25.0% |
| ! | ATCCAATATTACAAGATAAC+CGG | - | chr5_4:21469363-21469382 | None:intergenic | 25.0% |
| ! | ACATATAATGTTCGATTCTA+AGG | - | chr5_4:21469702-21469721 | None:intergenic | 25.0% |
| ! | AAATATTCAAGCACACAAAA+AGG | - | chr5_4:21469741-21469760 | None:intergenic | 25.0% |
| !!! | TTTTTGGGATGAAAATAGAT+TGG | + | chr5_4:21470408-21470427 | Msa0843740:CDS | 25.0% |
| ! | GAAATTTAGTTGTTATGTGT+TGG | + | chr5_4:21470600-21470619 | Msa0843740:CDS | 25.0% |
| ! | ACATGAAATTAGGAGTAAAT+GGG | + | chr5_4:21470687-21470706 | Msa0843740:CDS | 25.0% |
| !! | TATTTTGTGTTTCTAAGAGG+AGG | + | chr5_4:21466374-21466393 | Msa0843740:intron | 30.0% |
| ! | ACATTTTTCACATTTGTGCA+TGG | - | chr5_4:21466738-21466757 | None:intergenic | 30.0% |
| ATATTCTGAACTGTATAAGC+AGG | + | chr5_4:21466765-21466784 | Msa0843740:intron | 30.0% | |
| ! | TTCCATTGTGTATATTGACT+TGG | - | chr5_4:21467157-21467176 | None:intergenic | 30.0% |
| TTGGTCAGGAAAATAATACA+AGG | - | chr5_4:21467326-21467345 | None:intergenic | 30.0% | |
| ! | ACTAGGATTCTTTTTGTACA+TGG | - | chr5_4:21467606-21467625 | None:intergenic | 30.0% |
| TTATCTTGTGATATTGGATG+AGG | + | chr5_4:21467664-21467683 | Msa0843740:CDS | 30.0% | |
| TGGTTAAATTCTTGTTCTGA+GGG | - | chr5_4:21467751-21467770 | None:intergenic | 30.0% | |
| ATGGTTAAATTCTTGTTCTG+AGG | - | chr5_4:21467752-21467771 | None:intergenic | 30.0% | |
| TTAACCATCAAGTATTCATC+AGG | + | chr5_4:21467764-21467783 | Msa0843740:intron | 30.0% | |
| ATCGCTACTATGTTATAAGA+AGG | + | chr5_4:21467849-21467868 | Msa0843740:CDS | 30.0% | |
| CTACTATGTTATAAGAAGGA+AGG | + | chr5_4:21467853-21467872 | Msa0843740:CDS | 30.0% | |
| ACTATGTTATAAGAAGGAAG+GGG | + | chr5_4:21467855-21467874 | Msa0843740:CDS | 30.0% | |
| TGAGAGAAAAACTTGTACAA+TGG | - | chr5_4:21467925-21467944 | None:intergenic | 30.0% | |
| ! | AAGTTTTTCTCTCATGTCAA+CGG | + | chr5_4:21467931-21467950 | Msa0843740:intron | 30.0% |
| !! | ACCTGTTGATAATCATTGAA+GGG | - | chr5_4:21468183-21468202 | None:intergenic | 30.0% |
| !! | TACCTGTTGATAATCATTGA+AGG | - | chr5_4:21468184-21468203 | None:intergenic | 30.0% |
| GAAAAAAAGGTGGAAACTTA+AGG | + | chr5_4:21468278-21468297 | Msa0843740:intron | 30.0% | |
| CGATTCTTTAGTTGTTTGTA+AGG | - | chr5_4:21468532-21468551 | None:intergenic | 30.0% | |
| ! | CACATTGTTTAGAAGTGTAA+AGG | - | chr5_4:21468704-21468723 | None:intergenic | 30.0% |
| CCTTTCTAATCAATCAAACA+CGG | - | chr5_4:21468928-21468947 | None:intergenic | 30.0% | |
| ATTACAAGATAACCGGAATT+TGG | - | chr5_4:21469356-21469375 | None:intergenic | 30.0% | |
| TTCCGGTTATCTTGTAATAT+TGG | + | chr5_4:21469358-21469377 | Msa0843740:CDS | 30.0% | |
| TGGTTAAATGTTTGTTCTGA+GGG | - | chr5_4:21469451-21469470 | None:intergenic | 30.0% | |
| ATGGTTAAATGTTTGTTCTG+AGG | - | chr5_4:21469452-21469471 | None:intergenic | 30.0% | |
| ! | TTAACCATCAGTGATTTTGA+AGG | + | chr5_4:21469464-21469483 | Msa0843740:CDS | 30.0% |
| AGAAAATGTCATGTTTCTTC+CGG | + | chr5_4:21469499-21469518 | Msa0843740:intron | 30.0% | |
| TCCTTCTTATGACATAGTAA+CGG | - | chr5_4:21469550-21469569 | None:intergenic | 30.0% | |
| TTACTATGTCATAAGAAGGA+AGG | + | chr5_4:21469550-21469569 | Msa0843740:intron | 30.0% | |
| TACTATGTCATAAGAAGGAA+GGG | + | chr5_4:21469551-21469570 | Msa0843740:intron | 30.0% | |
| ! | CCTTTGAATTTAAGTTTGCT+TGG | - | chr5_4:21469880-21469899 | None:intergenic | 30.0% |
| CCAAGCAAACTTAAATTCAA+AGG | + | chr5_4:21469877-21469896 | Msa0843740:CDS | 30.0% | |
| AATTCAAAGGAAGAAGACAT+TGG | + | chr5_4:21469890-21469909 | Msa0843740:CDS | 30.0% | |
| !!! | AGGGACTTGTTTTAATATCA+TGG | - | chr5_4:21469940-21469959 | None:intergenic | 30.0% |
| TGATATTAAAACAAGTCCCT+TGG | + | chr5_4:21469940-21469959 | Msa0843740:CDS | 30.0% | |
| ! | GAAATAAGCAAGAAACGTTT+TGG | + | chr5_4:21469989-21470008 | Msa0843740:CDS | 30.0% |
| AACTCCATGTGGTTTATTAA+GGG | + | chr5_4:21470042-21470061 | Msa0843740:CDS | 30.0% | |
| ! | TCACTCAAATGGTAATTTGT+AGG | - | chr5_4:21470097-21470116 | None:intergenic | 30.0% |
| CTTCCTTCACAAACATAAAA+GGG | - | chr5_4:21470222-21470241 | None:intergenic | 30.0% | |
| ! | GATGAAAATAGATTGGTTGA+TGG | + | chr5_4:21470415-21470434 | Msa0843740:CDS | 30.0% |
| AAGTTGTTGAAGGAATGAAA+TGG | + | chr5_4:21470488-21470507 | Msa0843740:CDS | 30.0% | |
| AGTTGTTGAAGGAATGAAAT+GGG | + | chr5_4:21470489-21470508 | Msa0843740:CDS | 30.0% | |
| ACAAAAGTTGAAGAGTTTGA+TGG | + | chr5_4:21470562-21470581 | Msa0843740:CDS | 30.0% | |
| AGTTTGATGGAACAAACAAA+TGG | + | chr5_4:21470575-21470594 | Msa0843740:CDS | 30.0% | |
| AAAGAGAATGGATAGAAGAA+TGG | + | chr5_4:21470639-21470658 | Msa0843740:CDS | 30.0% | |
| CACATGAAATTAGGAGTAAA+TGG | + | chr5_4:21470686-21470705 | Msa0843740:CDS | 30.0% | |
| GAATTTGAGTGATGAAACCA+TGG | - | chr5_4:21466561-21466580 | None:intergenic | 35.0% | |
| ! | TTTTTCACATTTGTGCATGG+CGG | - | chr5_4:21466735-21466754 | None:intergenic | 35.0% |
| TAAAGGAGTTCTTGAAAGCA+TGG | + | chr5_4:21466828-21466847 | Msa0843740:CDS | 35.0% | |
| ! | AGTTCTTGAAAGCATGGAAA+TGG | + | chr5_4:21466834-21466853 | Msa0843740:CDS | 35.0% |
| AAGTGCTTATGACTTCAACT+GGG | + | chr5_4:21466919-21466938 | Msa0843740:intron | 35.0% | |
| ATAGATGAACAAGCCATCAA+TGG | - | chr5_4:21466955-21466974 | None:intergenic | 35.0% | |
| !! | TTGATGGCTTGTTCATCTAT+TGG | + | chr5_4:21466955-21466974 | Msa0843740:intron | 35.0% |
| GGATTCAACTTGTAGAGAAA+AGG | + | chr5_4:21467131-21467150 | Msa0843740:intron | 35.0% | |
| CTATCATCATTCTTGCCTAA+TGG | - | chr5_4:21467222-21467241 | None:intergenic | 35.0% | |
| TGATGATAGTAGTATGTACG+TGG | + | chr5_4:21467233-21467252 | Msa0843740:intron | 35.0% | |
| ATGTTTGCAAATTGACGTAC+AGG | + | chr5_4:21467454-21467473 | Msa0843740:intron | 35.0% | |
| !! | GCTCAAACTTACTCTTGTTT+TGG | + | chr5_4:21467689-21467708 | Msa0843740:CDS | 35.0% |
| !! | AAATTCTTGTTCTGAGGGAT+AGG | - | chr5_4:21467746-21467765 | None:intergenic | 35.0% |
| TTCACCTGATGAATACTTGA+TGG | - | chr5_4:21467771-21467790 | None:intergenic | 35.0% | |
| GAATGAACATAGCTTCTTCA+TGG | - | chr5_4:21467802-21467821 | None:intergenic | 35.0% | |
| ! | GACAATGGTTGATTCAATAC+TGG | - | chr5_4:21467824-21467843 | None:intergenic | 35.0% |
| TAGTACAAGTTCAAAGGAAG+AGG | + | chr5_4:21468098-21468117 | Msa0843740:CDS | 35.0% | |
| AGTACAAGTTCAAAGGAAGA+GGG | + | chr5_4:21468099-21468118 | Msa0843740:CDS | 35.0% | |
| ! | AAAACTACAGCAAAAGCATG+TGG | - | chr5_4:21468130-21468149 | None:intergenic | 35.0% |
| !!! | CTTTTTTTCCTCAATAACCC+AGG | - | chr5_4:21468267-21468286 | None:intergenic | 35.0% |
| CTGGGTTATTGAGGAAAAAA+AGG | + | chr5_4:21468265-21468284 | Msa0843740:CDS | 35.0% | |
| GGTTATTGAGGAAAAAAAGG+TGG | + | chr5_4:21468268-21468287 | Msa0843740:intron | 35.0% | |
| AATCATTTGAGCCTAAAGCT+TGG | - | chr5_4:21468332-21468351 | None:intergenic | 35.0% | |
| ATCCACTCCCATGATAATTA+AGG | + | chr5_4:21468596-21468615 | Msa0843740:intron | 35.0% | |
| !! | ATAGCATTCAGCGGATTATT+CGG | + | chr5_4:21468647-21468666 | Msa0843740:intron | 35.0% |
| ! | GTTTAGAAGTGTAAAGGAAG+AGG | - | chr5_4:21468698-21468717 | None:intergenic | 35.0% |
| GATTAATCAGGGAGTTGTAA+AGG | - | chr5_4:21468780-21468799 | None:intergenic | 35.0% | |
| CCGTGTTTGATTGATTAGAA+AGG | + | chr5_4:21468925-21468944 | Msa0843740:intron | 35.0% | |
| AGGACCAAGTCAATTGATAA+TGG | + | chr5_4:21468945-21468964 | Msa0843740:intron | 35.0% | |
| TACGCCATTATCAATTGACT+TGG | - | chr5_4:21468952-21468971 | None:intergenic | 35.0% | |
| ACAAGGTAGTGACAAATACT+AGG | - | chr5_4:21469058-21469077 | None:intergenic | 35.0% | |
| !! | CTTTCTCTTTCTTTGGTTTG+TGG | + | chr5_4:21469396-21469415 | Msa0843740:CDS | 35.0% |
| !! | AATGTTTGTTCTGAGGGAAA+GGG | - | chr5_4:21469445-21469464 | None:intergenic | 35.0% |
| !! | AAATGTTTGTTCTGAGGGAA+AGG | - | chr5_4:21469446-21469465 | None:intergenic | 35.0% |
| TCTACCTTCAAAATCACTGA+TGG | - | chr5_4:21469471-21469490 | None:intergenic | 35.0% | |
| ! | GACAATGGTTGATTCAATAC+CGG | - | chr5_4:21467824-21467843 | None:intergenic | 35.0% |
| ACCGTTACTATGTCATAAGA+AGG | + | chr5_4:21469546-21469565 | Msa0843740:intron | 35.0% | |
| ACTATGTCATAAGAAGGAAG+GGG | + | chr5_4:21469552-21469571 | Msa0843740:intron | 35.0% | |
| ! | TGAATTTAAGTTTGCTTGGC+TGG | - | chr5_4:21469876-21469895 | None:intergenic | 35.0% |
| GAACTCCATGTGGTTTATTA+AGG | + | chr5_4:21470041-21470060 | Msa0843740:CDS | 35.0% | |
| ACTCCATGTGGTTTATTAAG+GGG | + | chr5_4:21470043-21470062 | Msa0843740:CDS | 35.0% | |
| TTTCCCCTTAATAAACCACA+TGG | - | chr5_4:21470049-21470068 | None:intergenic | 35.0% | |
| GTTTATTAAGGGGAAAAGTG+TGG | + | chr5_4:21470053-21470072 | Msa0843740:CDS | 35.0% | |
| ! | CAAATGGTAATTTGTAGGAG+TGG | - | chr5_4:21470092-21470111 | None:intergenic | 35.0% |
| ! | CAAGGAATCATTTGAAGCTA+AGG | - | chr5_4:21470122-21470141 | None:intergenic | 35.0% |
| GACAATGGAAAGTTGAAATC+TGG | - | chr5_4:21470157-21470176 | None:intergenic | 35.0% | |
| TCAAAACGATCATTGGACAA+TGG | - | chr5_4:21470172-21470191 | None:intergenic | 35.0% | |
| ! | TTGCCCTTTTATGTTTGTGA+AGG | + | chr5_4:21470216-21470235 | Msa0843740:CDS | 35.0% |
| CCTTCCTTCACAAACATAAA+AGG | - | chr5_4:21470223-21470242 | None:intergenic | 35.0% | |
| ! | CCTTTTATGTTTGTGAAGGA+AGG | + | chr5_4:21470220-21470239 | Msa0843740:CDS | 35.0% |
| AATGCGCTTAAAGGAACAAA+TGG | + | chr5_4:21470243-21470262 | Msa0843740:CDS | 35.0% | |
| TATTCAGACAGAAGTTGCTA+AGG | + | chr5_4:21470369-21470388 | Msa0843740:CDS | 35.0% | |
| ! | AGTGTTGAAGAGAAAAGTGT+TGG | + | chr5_4:21470454-21470473 | Msa0843740:CDS | 35.0% |
| !! | GAAAAGTGTTGGATTGAGTT+TGG | + | chr5_4:21470465-21470484 | Msa0843740:CDS | 35.0% |
| TTGAGTTTGGAAGTTGTTGA+AGG | + | chr5_4:21470478-21470497 | Msa0843740:CDS | 35.0% | |
| GAATGAAATGGGAACAAGAA+AGG | + | chr5_4:21470500-21470519 | Msa0843740:CDS | 35.0% | |
| AAATGGGAACAAGAAAGGTT+TGG | + | chr5_4:21470505-21470524 | Msa0843740:CDS | 35.0% | |
| TCAGACACTCACATGAAATT+AGG | + | chr5_4:21470677-21470696 | Msa0843740:CDS | 35.0% | |
| AAAGGTCCTCAATAGTGTCA+CGG | - | chr5_4:21466124-21466143 | None:intergenic | 40.0% | |
| !!! | TGTCTTTGGGACACCTTTTA+AGG | - | chr5_4:21466244-21466263 | None:intergenic | 40.0% |
| AACGACTGTCTCTTGTCTTT+GGG | - | chr5_4:21466257-21466276 | None:intergenic | 40.0% | |
| TAACGACTGTCTCTTGTCTT+TGG | - | chr5_4:21466258-21466277 | None:intergenic | 40.0% | |
| ACAAGAGACAGTCGTTAACA+AGG | + | chr5_4:21466261-21466280 | Msa0843740:intron | 40.0% | |
| CAAGAGACAGTCGTTAACAA+GGG | + | chr5_4:21466262-21466281 | Msa0843740:intron | 40.0% | |
| ! | TGATGTGAGCCACTACATTT+TGG | + | chr5_4:21466345-21466364 | Msa0843740:intron | 40.0% |
| ! | GATGTGAGCCACTACATTTT+GGG | + | chr5_4:21466346-21466365 | Msa0843740:intron | 40.0% |
| GTGTAATCACTAATCAGCCA+TGG | + | chr5_4:21466541-21466560 | Msa0843740:intron | 40.0% | |
| TCTGAACTGTATAAGCAGGA+TGG | + | chr5_4:21466769-21466788 | Msa0843740:intron | 40.0% | |
| CTGAACTGTATAAGCAGGAT+GGG | + | chr5_4:21466770-21466789 | Msa0843740:intron | 40.0% | |
| !! | TAAGCAGGATGGGAGTATTA+AGG | + | chr5_4:21466780-21466799 | Msa0843740:intron | 40.0% |
| TTGAAGTCATAAGCACTTGC+TGG | - | chr5_4:21466917-21466936 | None:intergenic | 40.0% | |
| CAAGTGCTTATGACTTCAAC+TGG | + | chr5_4:21466918-21466937 | Msa0843740:intron | 40.0% | |
| !! | GTGCTAGTAGCTTTGTTTCA+TGG | + | chr5_4:21466977-21466996 | Msa0843740:intron | 40.0% |
| GGCCAAGTCAATATACACAA+TGG | + | chr5_4:21467152-21467171 | Msa0843740:intron | 40.0% | |
| CGCGTTTGACTATTCATAAC+GGG | - | chr5_4:21467286-21467305 | None:intergenic | 40.0% | |
| CCGCGTTTGACTATTCATAA+CGG | - | chr5_4:21467287-21467306 | None:intergenic | 40.0% | |
| CCGTTATGAATAGTCAAACG+CGG | + | chr5_4:21467284-21467303 | Msa0843740:intron | 40.0% | |
| TAACTTGAATTTGGCCCTGA+TGG | - | chr5_4:21467647-21467666 | None:intergenic | 40.0% | |
| !!! | CTCTTGTTTTGGTTTGTGCA+AGG | + | chr5_4:21467700-21467719 | Msa0843740:intron | 40.0% |
| TGAACATAGCTTCTTCATGG+CGG | - | chr5_4:21467799-21467818 | None:intergenic | 40.0% | |
| TAGTAGCGATTCGAAGACAA+TGG | - | chr5_4:21467839-21467858 | None:intergenic | 40.0% | |
| AGAAGGAAGGGGAAATATCA+AGG | + | chr5_4:21467866-21467885 | Msa0843740:CDS | 40.0% | |
| GAAGGAAGGGGAAATATCAA+GGG | + | chr5_4:21467867-21467886 | Msa0843740:CDS | 40.0% | |
| CCTTTGAACTTGTACTAGCT+TGG | - | chr5_4:21468095-21468114 | None:intergenic | 40.0% | |
| CCAAGCTAGTACAAGTTCAA+AGG | + | chr5_4:21468092-21468111 | Msa0843740:CDS | 40.0% | |
| TGATGTTCAACCAAGAGCTT+TGG | + | chr5_4:21468155-21468174 | Msa0843740:CDS | 40.0% | |
| GCCCTTCAATGATTATCAAC+AGG | + | chr5_4:21468179-21468198 | Msa0843740:CDS | 40.0% | |
| ! | TTTTTCCTCAATAACCCAGG+AGG | - | chr5_4:21468264-21468283 | None:intergenic | 40.0% |
| CTAAAGCTTGGCTTAAATGG+TGG | - | chr5_4:21468320-21468339 | None:intergenic | 40.0% | |
| CACCATTTAAGCCAAGCTTT+AGG | + | chr5_4:21468318-21468337 | Msa0843740:intron | 40.0% | |
| AGCCTAAAGCTTGGCTTAAA+TGG | - | chr5_4:21468323-21468342 | None:intergenic | 40.0% | |
| !! | ATTTGGTAGCTTTGAACGCA+AGG | - | chr5_4:21468355-21468374 | None:intergenic | 40.0% |
| AACACGGGACGATGATAAAA+AGG | + | chr5_4:21468470-21468489 | Msa0843740:intron | 40.0% | |
| ACACGGGACGATGATAAAAA+GGG | + | chr5_4:21468471-21468490 | Msa0843740:intron | 40.0% | |
| !! | TCATGGGAGTGGATTATGTA+TGG | - | chr5_4:21468590-21468609 | None:intergenic | 40.0% |
| AGCCTTAATTATCATGGGAG+TGG | - | chr5_4:21468601-21468620 | None:intergenic | 40.0% | |
| GGGAATCGAGAGATTAATCA+GGG | - | chr5_4:21468791-21468810 | None:intergenic | 40.0% | |
| AGGGAATCGAGAGATTAATC+AGG | - | chr5_4:21468792-21468811 | None:intergenic | 40.0% | |
| ACGGGAAGAATTTCTCAAAG+TGG | - | chr5_4:21468895-21468914 | None:intergenic | 40.0% | |
| GACTCCTTTCCATGTACAAA+AGG | + | chr5_4:21469294-21469313 | Msa0843740:intron | 40.0% | |
| ! | GGTTCCTTTTGTACATGGAA+AGG | - | chr5_4:21469301-21469320 | None:intergenic | 40.0% |
| ! | ACTAGGGTTCCTTTTGTACA+TGG | - | chr5_4:21469306-21469325 | None:intergenic | 40.0% |
| GCTCAGACTTTCTCTTTCTT+TGG | + | chr5_4:21469389-21469408 | Msa0843740:CDS | 40.0% | |
| !! | CTCTTTCTTTGGTTTGTGGA+AGG | + | chr5_4:21469400-21469419 | Msa0843740:CDS | 40.0% |
| !! | TTTGGTTTGTGGAAGGACAT+TGG | + | chr5_4:21469407-21469426 | Msa0843740:CDS | 40.0% |
| TTGTGGAAGGACATTGGTAT+TGG | + | chr5_4:21469413-21469432 | Msa0843740:CDS | 40.0% | |
| TGTGGAAGGACATTGGTATT+GGG | + | chr5_4:21469414-21469433 | Msa0843740:CDS | 40.0% | |
| TAGTAACGGTTCGAAGACAA+TGG | - | chr5_4:21469536-21469555 | None:intergenic | 40.0% | |
| TAATGATTGAAGGGCTCCAA+GGG | - | chr5_4:21469959-21469978 | None:intergenic | 40.0% | |
| ATAATGATTGAAGGGCTCCA+AGG | - | chr5_4:21469960-21469979 | None:intergenic | 40.0% | |
| !!! | TTTTGGTTTTCATGCCGAGT+CGG | + | chr5_4:21470006-21470025 | Msa0843740:CDS | 40.0% |
| AAGCTAAGGCTTCACTCAAA+TGG | - | chr5_4:21470108-21470127 | None:intergenic | 40.0% | |
| ! | GACTGGTTCAAAACGATCAT+TGG | - | chr5_4:21470179-21470198 | None:intergenic | 40.0% |
| AACCAGTCGTTGTTGGAAAA+TGG | + | chr5_4:21470191-21470210 | Msa0843740:CDS | 40.0% | |
| ! | TACCATTTTCCAACAACGAC+TGG | - | chr5_4:21470196-21470215 | None:intergenic | 40.0% |
| ! | TGGAAGGAAAGGATGCTTTT+TGG | + | chr5_4:21470392-21470411 | Msa0843740:CDS | 40.0% |
| !! | GGAAGGAAAGGATGCTTTTT+GGG | + | chr5_4:21470393-21470412 | Msa0843740:CDS | 40.0% |
| !! | GATTGGTTGATGGAGTGTTA+TGG | + | chr5_4:21470425-21470444 | Msa0843740:CDS | 40.0% |
| AAAGGTTTGGATGGAATGCT+GGG | + | chr5_4:21470518-21470537 | Msa0843740:CDS | 40.0% | |
| ! | AGCACTTGCTGGTAGAGTTA+AGG | - | chr5_4:21466906-21466925 | None:intergenic | 45.0% |
| TGAACAAGCCATCAATGGCA+AGG | - | chr5_4:21466950-21466969 | None:intergenic | 45.0% | |
| TATCAGACACACCACCATCA+GGG | + | chr5_4:21467630-21467649 | Msa0843740:CDS | 45.0% | |
| GAACATAGCTTCTTCATGGC+GGG | - | chr5_4:21467798-21467817 | None:intergenic | 45.0% | |
| GCAAAATCAGTTGCCTCAGA+TGG | + | chr5_4:21468234-21468253 | Msa0843740:CDS | 45.0% | |
| GAATTCCTCCTGGGTTATTG+AGG | + | chr5_4:21468256-21468275 | Msa0843740:CDS | 45.0% | |
| TTGGCTTAAATGGTGGTTGC+GGG | - | chr5_4:21468313-21468332 | None:intergenic | 45.0% | |
| CTTGGCTTAAATGGTGGTTG+CGG | - | chr5_4:21468314-21468333 | None:intergenic | 45.0% | |
| TGTAAAGGAAGAGGTAGTGC+AGG | - | chr5_4:21468689-21468708 | None:intergenic | 45.0% | |
| TCAGGGAGTTGTAAAGGAAG+AGG | - | chr5_4:21468774-21468793 | None:intergenic | 45.0% | |
| AGGGAAGAGGACATTGTCAA+GGG | - | chr5_4:21468811-21468830 | None:intergenic | 45.0% | |
| AAGGGAAGAGGACATTGTCA+AGG | - | chr5_4:21468812-21468831 | None:intergenic | 45.0% | |
| AGCAAAGGAACAAAGGGAAG+AGG | - | chr5_4:21468824-21468843 | None:intergenic | 45.0% | |
| TCTCAAAGTGGAAACGTCTC+TGG | - | chr5_4:21468883-21468902 | None:intergenic | 45.0% | |
| !! | GTGGATCTGAAAGAGCACTA+GGG | - | chr5_4:21469322-21469341 | None:intergenic | 45.0% |
| TAACCGGAATTTGGACCTGA+TGG | - | chr5_4:21469347-21469366 | None:intergenic | 45.0% | |
| AGAAGGAAGGGGAAGAATCA+AGG | + | chr5_4:21469563-21469582 | Msa0843740:intron | 45.0% | |
| GAAGGAAGGGGAAGAATCAA+GGG | + | chr5_4:21469564-21469583 | Msa0843740:intron | 45.0% | |
| ATCTGGTAGCTTAGAACGCA+AGG | - | chr5_4:21470140-21470159 | None:intergenic | 45.0% | |
| !! | CGTTTTGAACCAGTCGTTGT+TGG | + | chr5_4:21470184-21470203 | Msa0843740:CDS | 45.0% |
| GAAGGAAGGAATGCGCTTAA+AGG | + | chr5_4:21470234-21470253 | Msa0843740:CDS | 45.0% | |
| TCAGACAGAAGTTGCTAAGG+TGG | + | chr5_4:21470372-21470391 | Msa0843740:CDS | 45.0% | |
| ACAGAAGTTGCTAAGGTGGA+AGG | + | chr5_4:21470376-21470395 | Msa0843740:CDS | 45.0% | |
| AGTTGCTAAGGTGGAAGGAA+AGG | + | chr5_4:21470381-21470400 | Msa0843740:CDS | 45.0% | |
| GGGAACAAGAAAGGTTTGGA+TGG | + | chr5_4:21470509-21470528 | Msa0843740:CDS | 45.0% | |
| GAAAGGTTTGGATGGAATGC+TGG | + | chr5_4:21470517-21470536 | Msa0843740:CDS | 45.0% | |
| TTTGGATGGAATGCTGGGAA+GGG | + | chr5_4:21470523-21470542 | Msa0843740:CDS | 45.0% | |
| !! | AAATTAATTAGTATAAAAAT+GGG | - | chr5_4:21466473-21466492 | None:intergenic | 5.0% |
| !!! | TAAAGTTTTATATAATAATA+TGG | - | chr5_4:21467404-21467423 | None:intergenic | 5.0% |
| AGTGGTCCGTGACACTATTG+AGG | + | chr5_4:21466115-21466134 | Msa0843740:intron | 50.0% | |
| ! | GGAGTATTAAGGACTCCCTC+AGG | + | chr5_4:21466791-21466810 | Msa0843740:CDS | 50.0% |
| GAACTCCTTTACCGATGCAG+CGG | - | chr5_4:21466819-21466838 | None:intergenic | 50.0% | |
| GGGTCTTTCCTTGCCATTGA+TGG | + | chr5_4:21466939-21466958 | Msa0843740:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr5_4:21467000-21467019 | Msa0843740:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | + | chr5_4:21466999-21467018 | Msa0843740:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+GGG | + | chr5_4:21467000-21467019 | Msa0843740:intron | 50.0% | |
| ! | GGTGTGTCTGATAGAGCACT+AGG | - | chr5_4:21467623-21467642 | None:intergenic | 50.0% |
| CTATCAGACACACCACCATC+AGG | + | chr5_4:21467629-21467648 | Msa0843740:CDS | 50.0% | |
| CTTGAATTTGGCCCTGATGG+TGG | - | chr5_4:21467644-21467663 | None:intergenic | 50.0% | |
| TTGAAGGGCTCCAAAGCTCT+TGG | - | chr5_4:21468168-21468187 | None:intergenic | 50.0% | |
| CCTCAGATGGAATTCCTCCT+GGG | + | chr5_4:21468247-21468266 | Msa0843740:CDS | 50.0% | |
| TGGCTTAAATGGTGGTTGCG+GGG | - | chr5_4:21468312-21468331 | None:intergenic | 50.0% | |
| AAACACGGTAACGCAAGCAC+GGG | - | chr5_4:21468913-21468932 | None:intergenic | 50.0% | |
| CAAACACGGTAACGCAAGCA+CGG | - | chr5_4:21468914-21468933 | None:intergenic | 50.0% | |
| !! | GGTGGATCTGAAAGAGCACT+AGG | - | chr5_4:21469323-21469342 | None:intergenic | 50.0% |
| CTTTCAGATCCACCACCATC+AGG | + | chr5_4:21469329-21469348 | Msa0843740:CDS | 50.0% | |
| !! | GAATTTGGACCTGATGGTGG+TGG | - | chr5_4:21469341-21469360 | None:intergenic | 50.0% |
| CCACCATCAGGTCCAAATTC+CGG | + | chr5_4:21469341-21469360 | Msa0843740:CDS | 50.0% | |
| TTCCATGTAGGTAGCTCAGC+TGG | + | chr5_4:21469630-21469649 | Msa0843740:intron | 50.0% | |
| AGTTGACGCTCGAGCAAAGA+TGG | + | chr5_4:21470284-21470303 | Msa0843740:CDS | 50.0% | |
| GTTGACGCTCGAGCAAAGAT+GGG | + | chr5_4:21470285-21470304 | Msa0843740:CDS | 50.0% | |
| GTTTGGATGGAATGCTGGGA+AGG | + | chr5_4:21470522-21470541 | Msa0843740:CDS | 50.0% | |
| ! | AGGAACCGCTGCATCGGTAA+AGG | + | chr5_4:21466811-21466830 | Msa0843740:CDS | 55.0% |
| GAGAGAGAGAGAGAGAGAGG+GGG | + | chr5_4:21467063-21467082 | Msa0843740:intron | 55.0% | |
| AGAGAGAGAGAGAGAGAGGG+GGG | + | chr5_4:21467064-21467083 | Msa0843740:intron | 55.0% | |
| ! | CATAGCTTCTTCATGGCGGG+TGG | - | chr5_4:21467795-21467814 | None:intergenic | 55.0% |
| GCCTCAGATGGAATTCCTCC+TGG | + | chr5_4:21468246-21468265 | Msa0843740:CDS | 55.0% | |
| CCCAGGAGGAATTCCATCTG+AGG | - | chr5_4:21468250-21468269 | None:intergenic | 55.0% | |
| CCGGAATTTGGACCTGATGG+TGG | - | chr5_4:21469344-21469363 | None:intergenic | 55.0% | |
| CACCAGCTGAGCTACCTACA+TGG | - | chr5_4:21469635-21469654 | None:intergenic | 55.0% | |
| ACCACATGGAGTTCCATCCG+AGG | - | chr5_4:21470035-21470054 | None:intergenic | 55.0% | |
| TCCCTCAGGAACCGCTGCAT+CGG | + | chr5_4:21466805-21466824 | Msa0843740:CDS | 60.0% | |
| ACCGATGCAGCGGTTCCTGA+GGG | - | chr5_4:21466809-21466828 | None:intergenic | 60.0% | |
| TACCGATGCAGCGGTTCCTG+AGG | - | chr5_4:21466810-21466829 | None:intergenic | 60.0% | |
| GAGAGAGAGAGAGAGAGGGG+GGG | + | chr5_4:21467065-21467084 | Msa0843740:intron | 60.0% | |
| AGAGAGAGAGAGAGAGGGGG+GGG | + | chr5_4:21467066-21467085 | Msa0843740:intron | 60.0% | |
| TCATGCCGAGTCGGTTGCCT+CGG | + | chr5_4:21470015-21470034 | Msa0843740:CDS | 60.0% | |
| TCCATCCGAGGCAACCGACT+CGG | - | chr5_4:21470023-21470042 | None:intergenic | 60.0% | |
| GCCTCGGATGGAACTCCATG+TGG | + | chr5_4:21470031-21470050 | Msa0843740:CDS | 60.0% | |
| GAGAGAGAGAGAGAGGGGGG+GGG | + | chr5_4:21467067-21467086 | Msa0843740:intron | 65.0% | |
| AGAGAGAGAGAGAGGGGGGG+GGG | + | chr5_4:21467068-21467087 | Msa0843740:intron | 65.0% | |
| GAGAGAGAGAGAGGGGGGGG+GGG | + | chr5_4:21467069-21467088 | Msa0843740:intron | 70.0% | |
| AGAGAGAGAGAGGGGGGGGG+GGG | + | chr5_4:21467070-21467089 | Msa0843740:intron | 70.0% | |
| GAGGGAGGAGGAGGAGGAGG+AGG | + | chr5_4:21467098-21467117 | Msa0843740:intron | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | + | chr5_4:21467101-21467120 | Msa0843740:intron | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | + | chr5_4:21467101-21467120 | Msa0843740:intron | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | + | chr5_4:21467101-21467120 | Msa0843740:intron | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | + | chr5_4:21467101-21467120 | Msa0843740:intron | 70.0% | |
| GCCGAGTCGGTTGCCTCGGA+TGG | + | chr5_4:21470019-21470038 | Msa0843740:CDS | 70.0% | |
| GAGAGAGAGAGGGGGGGGGG+GGG | + | chr5_4:21467071-21467090 | Msa0843740:intron | 75.0% | |
| AGAGAGAGAGGGGGGGGGGG+GGG | + | chr5_4:21467072-21467091 | Msa0843740:intron | 75.0% | |
| GGGGAGGGAGGAGGAGGAGG+AGG | + | chr5_4:21467095-21467114 | Msa0843740:intron | 75.0% | |
| ! | GAGAGAGAGGGGGGGGGGGG+GGG | + | chr5_4:21467073-21467092 | Msa0843740:intron | 80.0% |
| ! | AGAGAGAGGGGGGGGGGGGG+GGG | + | chr5_4:21467074-21467093 | Msa0843740:intron | 80.0% |
| ! | GGGGGGGAGGGAGGAGGAGG+AGG | + | chr5_4:21467092-21467111 | Msa0843740:intron | 80.0% |
| ! | GAGAGAGGGGGGGGGGGGGG+GGG | + | chr5_4:21467075-21467094 | Msa0843740:intron | 85.0% |
| ! | AGAGAGGGGGGGGGGGGGGG+GGG | + | chr5_4:21467076-21467095 | Msa0843740:intron | 85.0% |
| ! | GGGGGGGGGGAGGGAGGAGG+AGG | + | chr5_4:21467089-21467108 | Msa0843740:intron | 85.0% |
| ! | AGGGGGGGGGGGGGGGGGGA+GGG | + | chr5_4:21467080-21467099 | Msa0843740:intron | 90.0% |
| ! | GGGGGGGGGGGGGAGGGAGG+AGG | + | chr5_4:21467086-21467105 | Msa0843740:intron | 90.0% |
| ! | GAGGGGGGGGGGGGGGGGGG+AGG | + | chr5_4:21467079-21467098 | Msa0843740:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGGAGGG+AGG | + | chr5_4:21467083-21467102 | Msa0843740:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 21466027 | 21470714 | 21466027 | ID=Msa0843740;Name=Msa0843740 |
| chr5_4 | mRNA | 21466027 | 21470714 | 21466027 | ID=Msa0843740-mRNA-1;Parent=Msa0843740;Name=Msa0843740-mRNA-1;_AED=0.26;_eAED=0.27;_QI=0|0.16|0|1|0.5|0.42|7|0|549 |
| chr5_4 | exon | 21466027 | 21466052 | 21466027 | ID=Msa0843740-mRNA-1:exon:8850;Parent=Msa0843740-mRNA-1 |
| chr5_4 | exon | 21466784 | 21466920 | 21466784 | ID=Msa0843740-mRNA-1:exon:8851;Parent=Msa0843740-mRNA-1 |
| chr5_4 | exon | 21467576 | 21467710 | 21467576 | ID=Msa0843740-mRNA-1:exon:8852;Parent=Msa0843740-mRNA-1 |
| chr5_4 | exon | 21467786 | 21467888 | 21467786 | ID=Msa0843740-mRNA-1:exon:8853;Parent=Msa0843740-mRNA-1 |
| chr5_4 | exon | 21468092 | 21468286 | 21468092 | ID=Msa0843740-mRNA-1:exon:8854;Parent=Msa0843740-mRNA-1 |
| chr5_4 | exon | 21469295 | 21469510 | 21469295 | ID=Msa0843740-mRNA-1:exon:8855;Parent=Msa0843740-mRNA-1 |
| chr5_4 | exon | 21469877 | 21470714 | 21469877 | ID=Msa0843740-mRNA-1:exon:8856;Parent=Msa0843740-mRNA-1 |
| chr5_4 | CDS | 21466027 | 21466052 | 21466027 | ID=Msa0843740-mRNA-1:cds;Parent=Msa0843740-mRNA-1 |
| chr5_4 | CDS | 21466784 | 21466920 | 21466784 | ID=Msa0843740-mRNA-1:cds;Parent=Msa0843740-mRNA-1 |
| chr5_4 | CDS | 21467576 | 21467710 | 21467576 | ID=Msa0843740-mRNA-1:cds;Parent=Msa0843740-mRNA-1 |
| chr5_4 | CDS | 21467786 | 21467888 | 21467786 | ID=Msa0843740-mRNA-1:cds;Parent=Msa0843740-mRNA-1 |
| chr5_4 | CDS | 21468092 | 21468286 | 21468092 | ID=Msa0843740-mRNA-1:cds;Parent=Msa0843740-mRNA-1 |
| chr5_4 | CDS | 21469295 | 21469510 | 21469295 | ID=Msa0843740-mRNA-1:cds;Parent=Msa0843740-mRNA-1 |
| chr5_4 | CDS | 21469877 | 21470714 | 21469877 | ID=Msa0843740-mRNA-1:cds;Parent=Msa0843740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
