Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050540 | XP_013462046.2 | 87.500 | 384 | 47 | 1 | 1 | 384 | 26 | 408 | 0.0 | 676 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050540 | sp|O81862|CHIC_ARATH | 50.275 | 364 | 166 | 6 | 11 | 365 | 9 | 366 | 5.59e-117 | 350 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050540 | A0A396J6K9 | 87.500 | 384 | 47 | 1 | 1 | 384 | 26 | 408 | 0.0 | 676 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa1050540 | 0.805189 | 1.505027e-49 | -8.615850e-47 |
| Msa0009530 | Msa1050540 | 0.804818 | 1.799500e-49 | -8.615850e-47 |
| Msa0020320 | Msa1050540 | 0.838626 | 2.572406e-57 | -8.615850e-47 |
| Msa0034100 | Msa1050540 | 0.801908 | 7.211424e-49 | -8.615850e-47 |
| Msa0040780 | Msa1050540 | 0.800739 | 1.251310e-48 | -8.615850e-47 |
| Msa0043460 | Msa1050540 | 0.801497 | 8.758310e-49 | -8.615850e-47 |
| Msa0069480 | Msa1050540 | -0.813920 | 2.004941e-51 | -8.615850e-47 |
| Msa0072830 | Msa1050540 | 0.824339 | 8.517699e-54 | -8.615850e-47 |
| Msa0072860 | Msa1050540 | 0.817957 | 2.517786e-52 | -8.615850e-47 |
| Msa0089010 | Msa1050540 | 0.831143 | 1.972639e-55 | -8.615850e-47 |
| Msa0104390 | Msa1050540 | 0.815319 | 9.826299e-52 | -8.615850e-47 |
| Msa0114700 | Msa1050540 | 0.802676 | 5.011199e-49 | -8.615850e-47 |
| Msa0116470 | Msa1050540 | 0.816200 | 6.252692e-52 | -8.615850e-47 |
| Msa0116510 | Msa1050540 | 0.821263 | 4.431720e-53 | -8.615850e-47 |
| Msa0120320 | Msa1050540 | 0.806499 | 7.984510e-50 | -8.615850e-47 |
| Msa0608780 | Msa1050540 | 0.808103 | 3.649742e-50 | -8.615850e-47 |
| Msa0615430 | Msa1050540 | 0.814034 | 1.891718e-51 | -8.615850e-47 |
| Msa0619670 | Msa1050540 | -0.803835 | 2.883135e-49 | -8.615850e-47 |
| Msa0629960 | Msa1050540 | 0.814524 | 1.474961e-51 | -8.615850e-47 |
| Msa0630010 | Msa1050540 | 0.834463 | 2.953819e-56 | -8.615850e-47 |
| Msa0655750 | Msa1050540 | 0.800649 | 1.305153e-48 | -8.615850e-47 |
| Msa0698480 | Msa1050540 | 0.811035 | 8.561640e-51 | -8.615850e-47 |
| Msa0698650 | Msa1050540 | 0.809638 | 1.713901e-50 | -8.615850e-47 |
| Msa0706130 | Msa1050540 | 0.808114 | 3.631703e-50 | -8.615850e-47 |
| Msa0803530 | Msa1050540 | 0.813404 | 2.604448e-51 | -8.615850e-47 |
| Msa0813030 | Msa1050540 | 0.837377 | 5.389692e-57 | -8.615850e-47 |
| Msa0131460 | Msa1050540 | -0.808523 | 2.969799e-50 | -8.615850e-47 |
| Msa0143280 | Msa1050540 | 0.807630 | 4.602401e-50 | -8.615850e-47 |
| Msa0147540 | Msa1050540 | 0.802819 | 4.681872e-49 | -8.615850e-47 |
| Msa0160650 | Msa1050540 | 0.808686 | 2.741649e-50 | -8.615850e-47 |
| Msa0177260 | Msa1050540 | -0.803046 | 4.202905e-49 | -8.615850e-47 |
| Msa0180290 | Msa1050540 | 0.808055 | 3.737077e-50 | -8.615850e-47 |
| Msa0218430 | Msa1050540 | 0.808536 | 2.951243e-50 | -8.615850e-47 |
| Msa0225070 | Msa1050540 | 0.803413 | 3.527923e-49 | -8.615850e-47 |
| Msa0387970 | Msa1050540 | 0.812130 | 4.948236e-51 | -8.615850e-47 |
| Msa0427260 | Msa1050540 | 0.803202 | 3.901710e-49 | -8.615850e-47 |
| Msa0451710 | Msa1050540 | 0.825953 | 3.538936e-54 | -8.615850e-47 |
| Msa0452490 | Msa1050540 | 0.826274 | 2.968143e-54 | -8.615850e-47 |
| Msa1009150 | Msa1050540 | 0.810578 | 1.075115e-50 | -8.615850e-47 |
| Msa1009170 | Msa1050540 | 0.819156 | 1.346441e-52 | -8.615850e-47 |
| Msa1009240 | Msa1050540 | 0.902565 | 8.516949e-79 | -8.615850e-47 |
| Msa1009260 | Msa1050540 | 0.828949 | 6.765056e-55 | -8.615850e-47 |
| Msa1031530 | Msa1050540 | 0.803867 | 2.840337e-49 | -8.615850e-47 |
| Msa1043020 | Msa1050540 | 0.844572 | 6.958925e-59 | -8.615850e-47 |
| Msa1050540 | Msa1050640 | 0.928130 | 4.461040e-92 | -8.615850e-47 |
| Msa1050540 | Msa1052030 | 0.807482 | 4.946765e-50 | -8.615850e-47 |
| Msa1050540 | Msa1070630 | 0.809303 | 2.023143e-50 | -8.615850e-47 |
| Msa1050540 | Msa1096510 | 0.836027 | 1.189881e-56 | -8.615850e-47 |
| Msa1050540 | Msa1096520 | 0.848132 | 7.449250e-60 | -8.615850e-47 |
| Msa1050540 | Msa1096570 | 0.834157 | 3.524948e-56 | -8.615850e-47 |
| Msa1050540 | Msa1098340 | 0.843890 | 1.060993e-58 | -8.615850e-47 |
| Msa1050540 | Msa1098350 | 0.833336 | 5.654231e-56 | -8.615850e-47 |
| Msa1050540 | Msa1125450 | 0.807613 | 4.639500e-50 | -8.615850e-47 |
| Msa1050540 | Msa1138440 | 0.958787 | 9.902909e-117 | -8.615850e-47 |
| Msa1050540 | Msa1138450 | 0.800251 | 1.573370e-48 | -8.615850e-47 |
| Msa1050540 | Msa1138480 | 0.800834 | 1.196521e-48 | -8.615850e-47 |
| Msa1050540 | Msa1138490 | 0.838170 | 3.371791e-57 | -8.615850e-47 |
| Msa1050540 | Msa1145930 | 0.825731 | 3.994785e-54 | -8.615850e-47 |
| Msa1050540 | Msa1158450 | 0.806795 | 6.914544e-50 | -8.615850e-47 |
| Msa1050540 | Msa1164570 | 0.807802 | 4.230133e-50 | -8.615850e-47 |
| Msa1050540 | Msa1186260 | -0.808295 | 3.321608e-50 | -8.615850e-47 |
| Msa1050540 | Msa1199670 | 0.804932 | 1.703248e-49 | -8.615850e-47 |
| Msa1050540 | Msa1204470 | 0.832723 | 8.032333e-56 | -8.615850e-47 |
| Msa1050540 | Msa1236860 | 0.815010 | 1.151017e-51 | -8.615850e-47 |
| Msa1050540 | Msa1256430 | 0.841144 | 5.677120e-58 | -8.615850e-47 |
| Msa1050540 | Msa1279310 | 0.805749 | 1.148653e-49 | -8.615850e-47 |
| Msa1050540 | Msa1279330 | 0.805975 | 1.029572e-49 | -8.615850e-47 |
| Msa1050540 | Msa1296680 | 0.825307 | 5.033546e-54 | -8.615850e-47 |
| Msa1050540 | Msa1317240 | 0.823142 | 1.624061e-53 | -8.615850e-47 |
| Msa1050540 | Msa1323260 | 0.812618 | 3.872757e-51 | -8.615850e-47 |
| Msa1050540 | Msa1343450 | 0.812788 | 3.555024e-51 | -8.615850e-47 |
| Msa1050540 | Msa1365850 | -0.815699 | 8.088629e-52 | -8.615850e-47 |
| Msa1050540 | Msa1386250 | 0.806535 | 7.846096e-50 | -8.615850e-47 |
| Msa1050540 | Msa1394810 | 0.815128 | 1.083317e-51 | -8.615850e-47 |
| Msa1050540 | Msa1406020 | 0.813542 | 2.428331e-51 | -8.615850e-47 |
| Msa1050540 | Msa1422150 | 0.832181 | 1.094520e-55 | -8.615850e-47 |
| Msa1050540 | Msa1422160 | 0.804617 | 1.981957e-49 | -8.615850e-47 |
| Msa1050540 | Msa1450780 | 0.809939 | 1.476772e-50 | -8.615850e-47 |
| Msa1050540 | Msa1456620 | 0.823527 | 1.320200e-53 | -8.615850e-47 |
| Msa0239610 | Msa1050540 | 0.816089 | 6.619297e-52 | -8.615850e-47 |
| Msa0266140 | Msa1050540 | 0.800018 | 1.754842e-48 | -8.615850e-47 |
| Msa0297270 | Msa1050540 | 0.810976 | 8.819752e-51 | -8.615850e-47 |
| Msa0304060 | Msa1050540 | 0.800433 | 1.444822e-48 | -8.615850e-47 |
| Msa0343370 | Msa1050540 | 0.829150 | 6.045690e-55 | -8.615850e-47 |
| Msa0360130 | Msa1050540 | 0.802667 | 5.032923e-49 | -8.615850e-47 |
| Msa0503620 | Msa1050540 | 0.800336 | 1.511794e-48 | -8.615850e-47 |
| Msa0517460 | Msa1050540 | 0.824199 | 9.188003e-54 | -8.615850e-47 |
| Msa0529360 | Msa1050540 | -0.806172 | 9.361089e-50 | -8.615850e-47 |
| Msa0530830 | Msa1050540 | 0.827549 | 1.471715e-54 | -8.615850e-47 |
| Msa0556070 | Msa1050540 | 0.805443 | 1.331588e-49 | -8.615850e-47 |
| Msa0558710 | Msa1050540 | 0.801219 | 9.985297e-49 | -8.615850e-47 |
| Msa0561420 | Msa1050540 | 0.805256 | 1.457101e-49 | -8.615850e-47 |
| Msa0575540 | Msa1050540 | 0.805789 | 1.126665e-49 | -8.615850e-47 |
| Msa0853500 | Msa1050540 | 0.821548 | 3.809089e-53 | -8.615850e-47 |
| Msa0861400 | Msa1050540 | 0.805872 | 1.082472e-49 | -8.615850e-47 |
| Msa0862230 | Msa1050540 | 0.824625 | 7.295044e-54 | -8.615850e-47 |
| Msa0884300 | Msa1050540 | 0.802553 | 5.313152e-49 | -8.615850e-47 |
| Msa0898830 | Msa1050540 | 0.822759 | 1.995218e-53 | -8.615850e-47 |
| Msa0930090 | Msa1050540 | 0.817308 | 3.527437e-52 | -8.615850e-47 |
| Msa0964150 | Msa1050540 | 0.815065 | 1.119117e-51 | -8.615850e-47 |
| Msa0967900 | Msa1050540 | 0.810471 | 1.133684e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050540 | MtrunA17_Chr3g0140461 | 87.500 | 384 | 47 | 1 | 1 | 384 | 26 | 408 | 0.0 | 676 |
| Msa1050540 | MtrunA17_Chr3g0140491 | 82.787 | 366 | 61 | 1 | 1 | 366 | 1 | 364 | 0.0 | 626 |
| Msa1050540 | MtrunA17_Chr4g0065451 | 83.007 | 153 | 26 | 0 | 213 | 365 | 1 | 153 | 7.61e-92 | 275 |
| Msa1050540 | MtrunA17_Chr1g0149821 | 35.196 | 358 | 213 | 5 | 22 | 366 | 32 | 383 | 1.03e-67 | 221 |
| Msa1050540 | MtrunA17_Chr4g0065461 | 78.873 | 142 | 26 | 2 | 1 | 141 | 1 | 139 | 2.97e-66 | 208 |
| Msa1050540 | MtrunA17_Chr4g0065531 | 34.584 | 373 | 218 | 9 | 3 | 361 | 2 | 362 | 9.29e-65 | 213 |
| Msa1050540 | MtrunA17_Chr4g0065561 | 35.753 | 372 | 213 | 10 | 9 | 364 | 6 | 367 | 9.91e-64 | 219 |
| Msa1050540 | MtrunA17_Chr4g0065541 | 34.417 | 369 | 220 | 7 | 26 | 381 | 17 | 376 | 1.97e-62 | 215 |
| Msa1050540 | MtrunA17_Chr4g0065511 | 35.143 | 350 | 205 | 9 | 30 | 365 | 35 | 376 | 1.47e-59 | 199 |
| Msa1050540 | MtrunA17_Chr4g0065501 | 35.593 | 354 | 202 | 8 | 30 | 365 | 37 | 382 | 7.39e-57 | 192 |
| Msa1050540 | MtrunA17_Chr4g0066051 | 35.593 | 177 | 110 | 1 | 6 | 182 | 4 | 176 | 8.23e-26 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050540 | AT4G19810.2 | 50.275 | 364 | 166 | 6 | 11 | 365 | 9 | 366 | 5.68e-118 | 350 |
| Msa1050540 | AT4G19810.1 | 50.275 | 364 | 166 | 6 | 11 | 365 | 9 | 366 | 5.68e-118 | 350 |
| Msa1050540 | AT4G19820.1 | 47.123 | 365 | 178 | 6 | 10 | 365 | 6 | 364 | 2.21e-103 | 312 |
| Msa1050540 | AT4G19800.1 | 42.162 | 370 | 191 | 6 | 25 | 377 | 2 | 365 | 1.12e-95 | 294 |
| Msa1050540 | AT4G19760.1 | 45.040 | 373 | 173 | 10 | 17 | 365 | 1 | 365 | 2.06e-94 | 290 |
| Msa1050540 | AT4G19750.1 | 44.628 | 363 | 173 | 10 | 17 | 362 | 1 | 352 | 2.48e-92 | 284 |
| Msa1050540 | AT4G19720.1 | 43.056 | 360 | 178 | 7 | 30 | 371 | 6 | 356 | 1.14e-88 | 275 |
| Msa1050540 | AT4G19730.1 | 41.888 | 339 | 168 | 9 | 17 | 333 | 1 | 332 | 2.59e-73 | 234 |
| Msa1050540 | AT4G19770.1 | 41.016 | 256 | 141 | 4 | 115 | 362 | 1 | 254 | 1.43e-57 | 191 |
| Msa1050540 | AT4G19740.1 | 35.602 | 191 | 109 | 5 | 138 | 318 | 24 | 210 | 4.33e-28 | 111 |
Find 104 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCATGGAAGTTGTTATTTC+TGG | 0.149476 | 7_2:-15593174 | None:intergenic |
| ATACCAATAACCACCTTTAA+TGG | 0.242528 | 7_2:-15592862 | None:intergenic |
| CTTCTGGACTTCTTGTCTTC+AGG | 0.245033 | 7_2:-15598559 | None:intergenic |
| GTTTGAGTTGGATAACTATC+TGG | 0.256686 | 7_2:-15593434 | None:intergenic |
| TCTACAAACGCTGCCATTAA+AGG | 0.257757 | 7_2:+15592849 | Msa1050540:CDS |
| GCACTTGGTTTACCCTTCTA+TGG | 0.267748 | 7_2:+15593554 | Msa1050540:CDS |
| GCCAAGCAAAATGGATTGTT+TGG | 0.270489 | 7_2:+15593782 | Msa1050540:CDS |
| CAGCGTTTGTAGAGGAAAAT+TGG | 0.280388 | 7_2:-15592839 | None:intergenic |
| CTGCCATTAAAGGTGGTTAT+TGG | 0.284781 | 7_2:+15592859 | Msa1050540:CDS |
| ATTCACATCAACAAAGAAAA+TGG | 0.292756 | 7_2:+15592758 | Msa1050540:exon |
| ACTCCATTTGTAACCATAGA+AGG | 0.300520 | 7_2:-15593567 | None:intergenic |
| TCCAGTTGAGATTCAGCTTC+TGG | 0.305173 | 7_2:-15598650 | None:intergenic |
| CAGATGAAGGTCTCACAAAA+TGG | 0.306351 | 7_2:+15593501 | Msa1050540:CDS |
| GTTGCTTATGCCAAGCAAAA+TGG | 0.325981 | 7_2:+15593773 | Msa1050540:CDS |
| GCTTCTGATGATATGACTTC+TGG | 0.342254 | 7_2:-15598575 | None:intergenic |
| GACCTTCATCTGCACTAAAT+TGG | 0.342441 | 7_2:-15593490 | None:intergenic |
| ATGGTGACTTGGTTGGTATT+AGG | 0.371295 | 7_2:-15592963 | None:intergenic |
| CTATGGTTACAAATGGAGTT+TGG | 0.386230 | 7_2:+15593571 | Msa1050540:CDS |
| CGAATTACTCTTTAACTGAA+TGG | 0.386421 | 7_2:-15593027 | None:intergenic |
| GAAGTTGAAATGACCAACTT+TGG | 0.388370 | 7_2:+15593227 | Msa1050540:CDS |
| ACCAGAAGCTGAATCTCAAC+TGG | 0.388839 | 7_2:+15598649 | Msa1050540:CDS |
| GCCGCAGAGTCTAGTAGTTC+CGG | 0.390481 | 7_2:+15593281 | Msa1050540:CDS |
| CTGCACTAAATTGGCCAGTT+GGG | 0.395696 | 7_2:-15593481 | None:intergenic |
| TAACAACAGTACCGGCTTGC+CGG | 0.396736 | 7_2:-15593300 | None:intergenic |
| GTTCCCAAGCTAGTCGGAAT+TGG | 0.399442 | 7_2:+15592586 | Msa1050540:five_prime_UTR |
| AGTAAAGCTACGCAGGGACT+AGG | 0.407460 | 7_2:+15593620 | Msa1050540:CDS |
| CTCAAAATTACTGCTTCAAA+GGG | 0.414658 | 7_2:+15593705 | Msa1050540:CDS |
| TTGTTGACTCTTCTCTTGCT+TGG | 0.416292 | 7_2:-15592678 | None:intergenic |
| CATTCAGTTAAAGAGTAATT+CGG | 0.416514 | 7_2:+15593028 | Msa1050540:CDS |
| TGTGCTTTAGTAGAACGTTC+AGG | 0.418141 | 7_2:-15593083 | None:intergenic |
| TGTTGCAAACAACTTGGATT+GGG | 0.430200 | 7_2:+15593382 | Msa1050540:CDS |
| TACCCTTCTATGGTTACAAA+TGG | 0.432906 | 7_2:+15593564 | Msa1050540:CDS |
| AAATTGGACAAGACAACAAT+TGG | 0.443469 | 7_2:+15593819 | Msa1050540:CDS |
| AAACAAGTGGGTGAAATAAG+AGG | 0.449767 | 7_2:-15592919 | None:intergenic |
| CATCCAATTCCGACTAGCTT+GGG | 0.455537 | 7_2:-15592589 | None:intergenic |
| TTGGTCGATACAAATTGTTT+CGG | 0.456249 | 7_2:-15592736 | None:intergenic |
| GTAAAGCTACGCAGGGACTA+GGG | 0.458430 | 7_2:+15593621 | Msa1050540:CDS |
| ACTCAAAATTACTGCTTCAA+AGG | 0.460609 | 7_2:+15593704 | Msa1050540:CDS |
| TCCATGGCCTTGATCTTGAC+TGG | 0.462821 | 7_2:+15593189 | Msa1050540:CDS |
| CTTGGTTGGTATTAGGATCA+AGG | 0.463271 | 7_2:-15592956 | None:intergenic |
| ACTGCTTCAAAGGGACAGAT+TGG | 0.463515 | 7_2:+15593714 | Msa1050540:CDS |
| CTCACAAAATGGGTAGGGTT+AGG | 0.464284 | 7_2:+15593512 | Msa1050540:CDS |
| AGCTGCGTTTGTAGAAGAAA+TGG | 0.467412 | 7_2:-15592982 | None:intergenic |
| AAACACAAACAAAGGATTAG+TGG | 0.468328 | 7_2:+15598732 | Msa1050540:CDS |
| CCATCCAATTCCGACTAGCT+TGG | 0.469321 | 7_2:-15592590 | None:intergenic |
| ATGTTGCAAACAACTTGGAT+TGG | 0.470996 | 7_2:+15593381 | Msa1050540:CDS |
| TTTGAGTTGGATAACTATCT+GGG | 0.472310 | 7_2:-15593433 | None:intergenic |
| TGTTTCGGATACGTGAGGTT+AGG | 0.476051 | 7_2:-15592721 | None:intergenic |
| TCAAGATGTTGCAAACAACT+TGG | 0.478830 | 7_2:+15593376 | Msa1050540:CDS |
| GTCATTTCAACTTCTGAGGA+TGG | 0.479248 | 7_2:-15593218 | None:intergenic |
| GCGGGTGGTTGTGTTTGAGT+TGG | 0.482952 | 7_2:-15593446 | None:intergenic |
| TCTGCACTAAATTGGCCAGT+TGG | 0.504088 | 7_2:-15593482 | None:intergenic |
| TAACTGAATGGTTTCAGTGA+AGG | 0.511458 | 7_2:-15593015 | None:intergenic |
| TGACCTGGGTAGTACTTCAA+TGG | 0.515075 | 7_2:-15593356 | None:intergenic |
| TTGGAGAATCATGAGGAGAG+TGG | 0.515988 | 7_2:-15592814 | None:intergenic |
| AGATGAAGGTCTCACAAAAT+GGG | 0.516707 | 7_2:+15593502 | Msa1050540:CDS |
| GTCTAGTAGTTCCGGCAAGC+CGG | 0.523204 | 7_2:+15593289 | Msa1050540:CDS |
| AATTGGACTCTTTCTCAAGC+AGG | 0.528807 | 7_2:+15593836 | Msa1050540:CDS |
| TTGTAGAGGAAAATTGGAGT+TGG | 0.530932 | 7_2:-15592833 | None:intergenic |
| GTTGGTCATTTCAACTTCTG+AGG | 0.534568 | 7_2:-15593222 | None:intergenic |
| TTGCTTGGCATAAGCAACCT+TGG | 0.538135 | 7_2:-15593768 | None:intergenic |
| TTGTTTGCAACATCTTGACC+TGG | 0.548598 | 7_2:-15593371 | None:intergenic |
| GCCAGTCAAGATCAAGGCCA+TGG | 0.551440 | 7_2:-15593190 | None:intergenic |
| AGTTGTTATTTCTGGCTAGT+CGG | 0.552779 | 7_2:-15593166 | None:intergenic |
| CCAAGCTAGTCGGAATTGGA+TGG | 0.556282 | 7_2:+15592590 | Msa1050540:five_prime_UTR |
| TGTAATGAGAAAACCAAAGT+TGG | 0.557402 | 7_2:-15593240 | None:intergenic |
| TTGTTATCTGCTGCAGTGGG+TGG | 0.559981 | 7_2:+15593317 | Msa1050540:CDS |
| CTGTTGTTATCTGCTGCAGT+GGG | 0.561968 | 7_2:+15593314 | Msa1050540:CDS |
| ACTGGCTTGGCTAGACATGT+TGG | 0.568429 | 7_2:-15593114 | None:intergenic |
| TACAGCGTGGAGAGCTGCTG+TGG | 0.570204 | 7_2:+15593259 | Msa1050540:CDS |
| GGCCAATTTAGTGCAGATGA+AGG | 0.571051 | 7_2:+15593488 | Msa1050540:CDS |
| TTTGCAGCTTCTCAAGCTTG+GGG | 0.571513 | 7_2:+15594651 | Msa1050540:intron |
| GAAGGTCTCACAAAATGGGT+AGG | 0.571961 | 7_2:+15593506 | Msa1050540:CDS |
| AACAAGTGGGTGAAATAAGA+GGG | 0.575691 | 7_2:-15592918 | None:intergenic |
| CTGCAAATGCACAAAACAAG+TGG | 0.579073 | 7_2:-15592932 | None:intergenic |
| CTCCATTTGTAACCATAGAA+GGG | 0.586080 | 7_2:-15593566 | None:intergenic |
| AAGGTCTCACAAAATGGGTA+GGG | 0.587493 | 7_2:+15593507 | Msa1050540:CDS |
| CACTCAGAGTATATCTGCCA+AGG | 0.587655 | 7_2:+15593751 | Msa1050540:CDS |
| ATCTAGTGTAAAGCATGTTG+TGG | 0.588380 | 7_2:+15594677 | Msa1050540:CDS |
| GATACAGCCAGTCAAGATCA+AGG | 0.589592 | 7_2:-15593196 | None:intergenic |
| CTTATCGTTCCCAAGCTAGT+CGG | 0.596591 | 7_2:+15592580 | Msa1050540:five_prime_UTR |
| GGATTCGAAAACACAAACAA+AGG | 0.597975 | 7_2:+15598724 | Msa1050540:CDS |
| AGAAGAAATGGTGACTTGGT+TGG | 0.600417 | 7_2:-15592970 | None:intergenic |
| GCAGCAGATAACAACAGTAC+CGG | 0.602334 | 7_2:-15593308 | None:intergenic |
| TGAGGAGAGTGGAAATCAAG+AGG | 0.606133 | 7_2:-15592803 | None:intergenic |
| TTCAAAGGGACAGATTGGTA+TGG | 0.606399 | 7_2:+15593719 | Msa1050540:CDS |
| CAAATTGTTTCGGATACGTG+AGG | 0.607030 | 7_2:-15592726 | None:intergenic |
| TTTAATGGCAGCGTTTGTAG+AGG | 0.608544 | 7_2:-15592847 | None:intergenic |
| ACTGTTGTTATCTGCTGCAG+TGG | 0.615630 | 7_2:+15593313 | Msa1050540:CDS |
| GGTGGTTATTGGTATTCTGA+TGG | 0.621200 | 7_2:+15592870 | Msa1050540:CDS |
| TAAAGCTACGCAGGGACTAG+GGG | 0.627917 | 7_2:+15593622 | Msa1050540:CDS |
| GCCAGAAATAACAACTTCCA+TGG | 0.628402 | 7_2:+15593173 | Msa1050540:CDS |
| ACTAGGGGCAGTGAAGTACA+AGG | 0.628451 | 7_2:+15593637 | Msa1050540:CDS |
| ATTGGAGTTGGAGAATCATG+AGG | 0.636575 | 7_2:-15592821 | None:intergenic |
| TTGTAGAAGAAATGGTGACT+TGG | 0.641849 | 7_2:-15592974 | None:intergenic |
| TGCAAATGCACAAAACAAGT+GGG | 0.643130 | 7_2:-15592931 | None:intergenic |
| GATCAATCTCAGAAACTGCA+AGG | 0.648716 | 7_2:-15592896 | None:intergenic |
| TGTTTGCAACATCTTGACCT+GGG | 0.652675 | 7_2:-15593370 | None:intergenic |
| ACAAACGCTGCCATTAAAGG+TGG | 0.664680 | 7_2:+15592852 | Msa1050540:CDS |
| GTTGTGGCTATAGTCACACC+AGG | 0.665701 | 7_2:+15594693 | Msa1050540:CDS |
| TGGTGAAATAGCTTCTGATG+AGG | 0.681327 | 7_2:-15598630 | None:intergenic |
| ACTCCATTGAAGTACTACCC+AGG | 0.697331 | 7_2:+15593353 | Msa1050540:CDS |
| TTGAGTTGGATAACTATCTG+GGG | 0.706447 | 7_2:-15593432 | None:intergenic |
| GCCGGAACTACTAGACTCTG+CGG | 0.755241 | 7_2:-15593282 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTAAATGTCATTTAAAT+AGG | + | chr7_2:15594255-15594274 | Msa1050540:intron | 10.0% |
| !! | TAAAAAATACAATAATTGAA+GGG | - | chr7_2:15594409-15594428 | None:intergenic | 10.0% |
| !!! | TTTTATAACTCTTTTTATAT+CGG | - | chr7_2:15594542-15594561 | None:intergenic | 10.0% |
| !!! | AAATACAGTAAATTTTTTTT+TGG | - | chr7_2:15594632-15594651 | None:intergenic | 10.0% |
| !! | ACATATATTATTAGATATTT+AGG | + | chr7_2:15595036-15595055 | Msa1050540:intron | 10.0% |
| !! | CATATATTATTAGATATTTA+GGG | + | chr7_2:15595037-15595056 | Msa1050540:intron | 10.0% |
| !!! | ATTTTGAAAATGATTAATAA+TGG | - | chr7_2:15595206-15595225 | None:intergenic | 10.0% |
| !!! | AAAAAAGATATTAAAGTATT+TGG | + | chr7_2:15595432-15595451 | Msa1050540:intron | 10.0% |
| !!! | AATTTAAAATTAATTTCTAC+TGG | - | chr7_2:15596109-15596128 | None:intergenic | 10.0% |
| !! | GAACATATTTAAAAAAAAAA+GGG | - | chr7_2:15596346-15596365 | None:intergenic | 10.0% |
| !! | TGAACATATTTAAAAAAAAA+AGG | - | chr7_2:15596347-15596366 | None:intergenic | 10.0% |
| !! | AGGTATTAAAAATTATAAAT+TGG | + | chr7_2:15598310-15598329 | Msa1050540:intron | 10.0% |
| !! | GAAAAATATACATTTATCTA+TGG | + | chr7_2:15594111-15594130 | Msa1050540:intron | 15.0% |
| !! | GTAAAAAATACAATAATTGA+AGG | - | chr7_2:15594410-15594429 | None:intergenic | 15.0% |
| !!! | TACTTTAATCAAAGTTTTAA+AGG | + | chr7_2:15595506-15595525 | Msa1050540:intron | 15.0% |
| !! | AGTTTATGAACATAATTAAA+AGG | + | chr7_2:15595671-15595690 | Msa1050540:intron | 15.0% |
| !!! | TTCTAATTGTTTTTTTTGAA+GGG | - | chr7_2:15595997-15596016 | None:intergenic | 15.0% |
| !! | AGAAACAAAAATATCTTAAT+AGG | + | chr7_2:15596252-15596271 | Msa1050540:intron | 15.0% |
| !!! | ATAACTTACTTTTTATTTGT+GGG | - | chr7_2:15596624-15596643 | None:intergenic | 15.0% |
| !!! | AATAACTTACTTTTTATTTG+TGG | - | chr7_2:15596625-15596644 | None:intergenic | 15.0% |
| !!! | TGATGATATTATTATTGTTT+TGG | - | chr7_2:15597331-15597350 | None:intergenic | 15.0% |
| !! | TAATTACTAAAACTTACATA+AGG | - | chr7_2:15597940-15597959 | None:intergenic | 15.0% |
| !! | TTAGTAATTAGACAAAATTA+TGG | + | chr7_2:15597950-15597969 | Msa1050540:intron | 15.0% |
| !!! | ATGTAAAGATTTTTTGATTT+TGG | - | chr7_2:15598230-15598249 | None:intergenic | 15.0% |
| !! | ATGATGTAACTTTATAATTA+TGG | - | chr7_2:15598366-15598385 | None:intergenic | 15.0% |
| !!! | TAGCTTTACTAAAAATTCTA+CGG | - | chr7_2:15593610-15593629 | None:intergenic | 20.0% |
| !! | TACAAGGATATAAAAAATAC+TGG | + | chr7_2:15593653-15593672 | Msa1050540:CDS | 20.0% |
| !! | ACAAGGATATAAAAAATACT+GGG | + | chr7_2:15593654-15593673 | Msa1050540:CDS | 20.0% |
| !!! | TCTTGTGTTTTTTTACTAAA+AGG | + | chr7_2:15593940-15593959 | Msa1050540:intron | 20.0% |
| !!! | CTTGTGTTTTTTTACTAAAA+GGG | + | chr7_2:15593941-15593960 | Msa1050540:intron | 20.0% |
| !! | ACTAAGTTGTAGTAAATATA+TGG | + | chr7_2:15594059-15594078 | Msa1050540:intron | 20.0% |
| !! | CTAAGTTGTAGTAAATATAT+GGG | + | chr7_2:15594060-15594079 | Msa1050540:intron | 20.0% |
| !! | TATTCTATACCAATGTATAA+AGG | + | chr7_2:15594173-15594192 | Msa1050540:intron | 20.0% |
| !! | ATTCTATACCAATGTATAAA+GGG | + | chr7_2:15594174-15594193 | Msa1050540:intron | 20.0% |
| !! | ATTATAAAAAGTTAAGCACA+TGG | - | chr7_2:15594208-15594227 | None:intergenic | 20.0% |
| !! | TTTGACATACCATTAAAAAT+AGG | - | chr7_2:15594593-15594612 | None:intergenic | 20.0% |
| !! | AGAACATGAAAAAAAAATTG+GGG | - | chr7_2:15594724-15594743 | None:intergenic | 20.0% |
| !! | CAGAACATGAAAAAAAAATT+GGG | - | chr7_2:15594725-15594744 | None:intergenic | 20.0% |
| !! | TCAGAACATGAAAAAAAAAT+TGG | - | chr7_2:15594726-15594745 | None:intergenic | 20.0% |
| !! | AATTCAATTAATGATGTATG+TGG | + | chr7_2:15594924-15594943 | Msa1050540:intron | 20.0% |
| !!! | TTTTTGCTTATAATAATGAC+CGG | + | chr7_2:15594998-15595017 | Msa1050540:intron | 20.0% |
| !! | TGAAAATGATTAATAATGGT+GGG | - | chr7_2:15595202-15595221 | None:intergenic | 20.0% |
| !! | TTGAAAATGATTAATAATGG+TGG | - | chr7_2:15595203-15595222 | None:intergenic | 20.0% |
| !!! | TTAGATCAATGTTTTTATAG+AGG | - | chr7_2:15595598-15595617 | None:intergenic | 20.0% |
| !!! | CTTAAAACAAGCAATATTTT+GGG | - | chr7_2:15595867-15595886 | None:intergenic | 20.0% |
| !!! | GTCTAATGAAAGTTTTAAAA+TGG | + | chr7_2:15595893-15595912 | Msa1050540:intron | 20.0% |
| !!! | GTTCTAATTGTTTTTTTTGA+AGG | - | chr7_2:15595998-15596017 | None:intergenic | 20.0% |
| !! | AACTAATTCTTACAAAACAA+AGG | + | chr7_2:15596015-15596034 | Msa1050540:intron | 20.0% |
| !! | TAGTACGTTTATCTATATTA+AGG | - | chr7_2:15596132-15596151 | None:intergenic | 20.0% |
| !!! | TCTGTTTTCATTAAAAACTT+GGG | - | chr7_2:15596450-15596469 | None:intergenic | 20.0% |
| !! | ATATACTTGATTGAATCAAA+CGG | + | chr7_2:15596751-15596770 | Msa1050540:intron | 20.0% |
| !! | AAATTTCATGCTAACTTTAT+AGG | + | chr7_2:15597294-15597313 | Msa1050540:intron | 20.0% |
| !!! | TTTGTGCTATTTTACTATTT+TGG | - | chr7_2:15597568-15597587 | None:intergenic | 20.0% |
| !! | AAGAAACATTTATTTGTAGT+TGG | - | chr7_2:15597765-15597784 | None:intergenic | 20.0% |
| !!! | TCAATTTTCATGAATTAGTT+TGG | - | chr7_2:15597796-15597815 | None:intergenic | 20.0% |
| !! | TGATACAAATAAATGCTAAA+TGG | + | chr7_2:15597877-15597896 | Msa1050540:intron | 20.0% |
| !! | TTATAAAGTTACATCATCAT+TGG | + | chr7_2:15598369-15598388 | Msa1050540:intron | 20.0% |
| !! | ATACTTTTCAAAACACTGTT+TGG | + | chr7_2:15592625-15592644 | Msa1050540:five_prime_UTR | 25.0% |
| !!! | TGGTTTTCATGTTTTAAGTT+TGG | + | chr7_2:15592645-15592664 | Msa1050540:five_prime_UTR | 25.0% |
| !! | TTTTCTTTGTTGATGTGAAT+TGG | - | chr7_2:15592758-15592777 | None:intergenic | 25.0% |
| ! | ATTCACATCAACAAAGAAAA+TGG | + | chr7_2:15592758-15592777 | Msa1050540:exon | 25.0% |
| ! | CATTCAGTTAAAGAGTAATT+CGG | + | chr7_2:15593028-15593047 | Msa1050540:CDS | 25.0% |
| !! | AAGAATCTATGAACGATTTT+CGG | - | chr7_2:15593142-15593161 | None:intergenic | 25.0% |
| ! | CTAAAAATTCTACGGTTATT+AGG | - | chr7_2:15593602-15593621 | None:intergenic | 25.0% |
| ! | CAAGGATATAAAAAATACTG+GGG | + | chr7_2:15593655-15593674 | Msa1050540:CDS | 25.0% |
| ! | AAGGATATAAAAAATACTGG+GGG | + | chr7_2:15593656-15593675 | Msa1050540:CDS | 25.0% |
| !!! | TTGCACCTTTTTTTTTTAAG+AGG | + | chr7_2:15593895-15593914 | Msa1050540:intron | 25.0% |
| ! | AAGCTCCTCTTAAAAAAAAA+AGG | - | chr7_2:15593903-15593922 | None:intergenic | 25.0% |
| ! | TTCTATACCAATGTATAAAG+GGG | + | chr7_2:15594175-15594194 | Msa1050540:intron | 25.0% |
| !!! | CTTTTACCACCTATTTTTAA+TGG | + | chr7_2:15594581-15594600 | Msa1050540:intron | 25.0% |
| ! | AGTTAAATATTGTTGTACGT+TGG | + | chr7_2:15594829-15594848 | Msa1050540:intron | 25.0% |
| ! | GTTAAATATTGTTGTACGTT+GGG | + | chr7_2:15594830-15594849 | Msa1050540:intron | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | - | chr7_2:15594963-15594982 | None:intergenic | 25.0% |
| ! | GAAATGGATAAGAGTTTAAA+TGG | + | chr7_2:15595255-15595274 | Msa1050540:intron | 25.0% |
| ! | TATCAATGTATGGTTGAAAA+GGG | - | chr7_2:15595570-15595589 | None:intergenic | 25.0% |
| ! | ATATCAATGTATGGTTGAAA+AGG | - | chr7_2:15595571-15595590 | None:intergenic | 25.0% |
| ! | TTCAACCATACATTGATATA+AGG | + | chr7_2:15595572-15595591 | Msa1050540:intron | 25.0% |
| !!! | GGGTAAACATAATTTTAAGA+TGG | + | chr7_2:15595702-15595721 | Msa1050540:intron | 25.0% |
| !! | AATTTGAAGAGATTTTCTTG+TGG | - | chr7_2:15595728-15595747 | None:intergenic | 25.0% |
| ! | AGCTAAAAAGAAAATGAGAT+TGG | + | chr7_2:15595764-15595783 | Msa1050540:intron | 25.0% |
| ! | GCTAAAAAGAAAATGAGATT+GGG | + | chr7_2:15595765-15595784 | Msa1050540:intron | 25.0% |
| ! | GTCAATGAAAATCCAAATAT+TGG | + | chr7_2:15595787-15595806 | Msa1050540:intron | 25.0% |
| !! | TTTTGATGAGAACCAATATT+TGG | - | chr7_2:15595802-15595821 | None:intergenic | 25.0% |
| !!! | TTCTAGAATTTTGTTAGCAA+TGG | - | chr7_2:15595826-15595845 | None:intergenic | 25.0% |
| !! | CCTTAAAACAAGCAATATTT+TGG | - | chr7_2:15595868-15595887 | None:intergenic | 25.0% |
| !!! | CCAAAATATTGCTTGTTTTA+AGG | + | chr7_2:15595865-15595884 | Msa1050540:intron | 25.0% |
| ! | TGACTAACAATAATTATGAG+TGG | + | chr7_2:15595917-15595936 | Msa1050540:intron | 25.0% |
| !!! | ATTTTAGTTGTTTCTCATAC+TGG | - | chr7_2:15596046-15596065 | None:intergenic | 25.0% |
| ! | TCATATTGGTATTAATCTAG+TGG | + | chr7_2:15596215-15596234 | Msa1050540:intron | 25.0% |
| ! | TAAGAAAGAGAGAATTTCAT+AGG | + | chr7_2:15596393-15596412 | Msa1050540:intron | 25.0% |
| ! | AAGAAAGAGAGAATTTCATA+GGG | + | chr7_2:15596394-15596413 | Msa1050540:intron | 25.0% |
| !! | CTCTGTTTTCATTAAAAACT+TGG | - | chr7_2:15596451-15596470 | None:intergenic | 25.0% |
| !!! | ACTTTTTATTTGTGGGTAAA+AGG | - | chr7_2:15596617-15596636 | None:intergenic | 25.0% |
| ! | TATACTTGATTGAATCAAAC+GGG | + | chr7_2:15596752-15596771 | Msa1050540:intron | 25.0% |
| ! | CATATTAATAAGTTGTATCG+AGG | - | chr7_2:15596794-15596813 | None:intergenic | 25.0% |
| ! | CTCGATACAACTTATTAATA+TGG | + | chr7_2:15596792-15596811 | Msa1050540:intron | 25.0% |
| ! | TTAAACATGAAATTGATGAG+TGG | - | chr7_2:15597076-15597095 | None:intergenic | 25.0% |
| ! | AATTTCATGTTTAACACCAA+AGG | + | chr7_2:15597082-15597101 | Msa1050540:intron | 25.0% |
| ! | ATTTCATGTTTAACACCAAA+GGG | + | chr7_2:15597083-15597102 | Msa1050540:intron | 25.0% |
| ! | CTATAACAGTATCAGATATA+TGG | + | chr7_2:15597111-15597130 | Msa1050540:intron | 25.0% |
| ! | CATTAAGAAAACAAAGAAAC+AGG | + | chr7_2:15597139-15597158 | Msa1050540:intron | 25.0% |
| !! | AGCATGAAATTTTACTGTTT+TGG | - | chr7_2:15597286-15597305 | None:intergenic | 25.0% |
| ! | AATTCATATGCAAGCTAAAT+TGG | + | chr7_2:15597416-15597435 | Msa1050540:intron | 25.0% |
| !!! | TGAAGTCTTTTGGAATATTT+TGG | - | chr7_2:15597665-15597684 | None:intergenic | 25.0% |
| !!! | ATCGAATCTGATATTTTTAG+TGG | + | chr7_2:15597827-15597846 | Msa1050540:intron | 25.0% |
| ! | TAAATGCTAAATGGTATGAA+TGG | + | chr7_2:15597886-15597905 | Msa1050540:intron | 25.0% |
| ! | GTATGAATGGTAAATCTAAT+TGG | + | chr7_2:15597899-15597918 | Msa1050540:intron | 25.0% |
| ! | AAAAAAATCTTCCCTATAGT+AGG | - | chr7_2:15598045-15598064 | None:intergenic | 25.0% |
| !! | GTGTTATTCATTTGATCTAA+TGG | - | chr7_2:15598070-15598089 | None:intergenic | 25.0% |
| ! | ATCTTTACATTACATTGTGT+TGG | + | chr7_2:15598240-15598259 | Msa1050540:intron | 25.0% |
| ! | GTTATCATCAAAACTCTTTA+AGG | - | chr7_2:15598289-15598308 | None:intergenic | 25.0% |
| !!! | AAAGAGTTTTGATGATAACA+AGG | + | chr7_2:15598290-15598309 | Msa1050540:intron | 25.0% |
| ! | TAATATTTGTTCAAGTGTAC+AGG | + | chr7_2:15598339-15598358 | Msa1050540:intron | 25.0% |
| !! | AACAACAAAAATTTGAAGCT+TGG | + | chr7_2:15598421-15598440 | Msa1050540:intron | 25.0% |
| TTGGTCGATACAAATTGTTT+CGG | - | chr7_2:15592739-15592758 | None:intergenic | 30.0% | |
| ATACCAATAACCACCTTTAA+TGG | - | chr7_2:15592865-15592884 | None:intergenic | 30.0% | |
| CGAATTACTCTTTAACTGAA+TGG | - | chr7_2:15593030-15593049 | None:intergenic | 30.0% | |
| ! | GTGAAAACGCTTTTATCAAT+TGG | + | chr7_2:15593050-15593069 | Msa1050540:CDS | 30.0% |
| ! | AAAACGCTTTTATCAATTGG+TGG | + | chr7_2:15593053-15593072 | Msa1050540:CDS | 30.0% |
| TGTAATGAGAAAACCAAAGT+TGG | - | chr7_2:15593243-15593262 | None:intergenic | 30.0% | |
| !! | TTTGAGTTGGATAACTATCT+GGG | - | chr7_2:15593436-15593455 | None:intergenic | 30.0% |
| !!! | AATTTTTAGTAAAGCTACGC+AGG | + | chr7_2:15593613-15593632 | Msa1050540:CDS | 30.0% |
| !!! | ATTTTTAGTAAAGCTACGCA+GGG | + | chr7_2:15593614-15593633 | Msa1050540:CDS | 30.0% |
| AGGATATAAAAAATACTGGG+GGG | + | chr7_2:15593657-15593676 | Msa1050540:CDS | 30.0% | |
| !! | GCAGTAATTTTGAGTATATG+TGG | - | chr7_2:15593699-15593718 | None:intergenic | 30.0% |
| ACTCAAAATTACTGCTTCAA+AGG | + | chr7_2:15593704-15593723 | Msa1050540:CDS | 30.0% | |
| CTCAAAATTACTGCTTCAAA+GGG | + | chr7_2:15593705-15593724 | Msa1050540:CDS | 30.0% | |
| ! | GATTGTTTGGATATTTTGCT+TGG | + | chr7_2:15593795-15593814 | Msa1050540:CDS | 30.0% |
| AAATTGGACAAGACAACAAT+TGG | + | chr7_2:15593819-15593838 | Msa1050540:CDS | 30.0% | |
| !! | CAACAAAGCAGTGTTTTATT+AGG | - | chr7_2:15593878-15593897 | None:intergenic | 30.0% |
| TGTAGTAAATATATGGGCAA+TGG | + | chr7_2:15594066-15594085 | Msa1050540:intron | 30.0% | |
| CAATATTGCTTCTATTGTCA+TGG | - | chr7_2:15594306-15594325 | None:intergenic | 30.0% | |
| CATGACAATAGAAGCAATAT+TGG | + | chr7_2:15594304-15594323 | Msa1050540:intron | 30.0% | |
| ! | TAACTCTTTTTATATCGGCA+TGG | - | chr7_2:15594537-15594556 | None:intergenic | 30.0% |
| AAAATAGGTGGTAAAAGTCA+AGG | - | chr7_2:15594578-15594597 | None:intergenic | 30.0% | |
| GACATACCATTAAAAATAGG+TGG | - | chr7_2:15594590-15594609 | None:intergenic | 30.0% | |
| !! | ATATTTAGGGTTGCAGTTTT+TGG | + | chr7_2:15595050-15595069 | Msa1050540:intron | 30.0% |
| ATCAGCAGGTCAATAATAAT+TGG | - | chr7_2:15595099-15595118 | None:intergenic | 30.0% | |
| TATCTCTTTCACAATGATAG+AGG | - | chr7_2:15595141-15595160 | None:intergenic | 30.0% | |
| GAAAGAGATAGACACAAAAT+AGG | + | chr7_2:15595151-15595170 | Msa1050540:intron | 30.0% | |
| ATCACATGAAATGTATGTGT+TGG | - | chr7_2:15595298-15595317 | None:intergenic | 30.0% | |
| TCATAAACTACCACTTAAGA+AGG | - | chr7_2:15595660-15595679 | None:intergenic | 30.0% | |
| ! | ATAATTAAAAGGCACGTTGT+GGG | + | chr7_2:15595682-15595701 | Msa1050540:intron | 30.0% |
| !! | ATATGATTTGCTTCATAGCT+AGG | - | chr7_2:15596201-15596220 | None:intergenic | 30.0% |
| AGCTATGAAGCAAATCATAT+TGG | + | chr7_2:15596201-15596220 | Msa1050540:intron | 30.0% | |
| TTCAATATCCATGACAAAAG+TGG | + | chr7_2:15596532-15596551 | Msa1050540:intron | 30.0% | |
| ATACTTGATTGAATCAAACG+GGG | + | chr7_2:15596753-15596772 | Msa1050540:intron | 30.0% | |
| TGTAGTAGATCATCCAAAAT+CGG | - | chr7_2:15596859-15596878 | None:intergenic | 30.0% | |
| TGATCTACTACAATAACAAG+AGG | + | chr7_2:15596867-15596886 | Msa1050540:intron | 30.0% | |
| GATCTACTACAATAACAAGA+GGG | + | chr7_2:15596868-15596887 | Msa1050540:intron | 30.0% | |
| CATGACTGAGTATATTTCAA+AGG | - | chr7_2:15596950-15596969 | None:intergenic | 30.0% | |
| !! | CTTTGAAATATACTCAGTCA+TGG | + | chr7_2:15596948-15596967 | Msa1050540:intron | 30.0% |
| AAATCTAGTGTTTAGAGAGT+AGG | - | chr7_2:15598101-15598120 | None:intergenic | 30.0% | |
| AATGAGCAAATAAAGAGCAA+AGG | + | chr7_2:15598397-15598416 | Msa1050540:intron | 30.0% | |
| TCAATGCAAAAACTGTCTAT+TGG | + | chr7_2:15598703-15598722 | Msa1050540:CDS | 30.0% | |
| TTGTAGAGGAAAATTGGAGT+TGG | - | chr7_2:15592836-15592855 | None:intergenic | 35.0% | |
| AACAAGTGGGTGAAATAAGA+GGG | - | chr7_2:15592921-15592940 | None:intergenic | 35.0% | |
| AAACAAGTGGGTGAAATAAG+AGG | - | chr7_2:15592922-15592941 | None:intergenic | 35.0% | |
| TGCAAATGCACAAAACAAGT+GGG | - | chr7_2:15592934-15592953 | None:intergenic | 35.0% | |
| TTGTAGAAGAAATGGTGACT+TGG | - | chr7_2:15592977-15592996 | None:intergenic | 35.0% | |
| TAACTGAATGGTTTCAGTGA+AGG | - | chr7_2:15593018-15593037 | None:intergenic | 35.0% | |
| !! | AGTTGTTATTTCTGGCTAGT+CGG | - | chr7_2:15593169-15593188 | None:intergenic | 35.0% |
| GAAGTTGAAATGACCAACTT+TGG | + | chr7_2:15593227-15593246 | Msa1050540:CDS | 35.0% | |
| TCAAGATGTTGCAAACAACT+TGG | + | chr7_2:15593376-15593395 | Msa1050540:CDS | 35.0% | |
| ATGTTGCAAACAACTTGGAT+TGG | + | chr7_2:15593381-15593400 | Msa1050540:CDS | 35.0% | |
| TGTTGCAAACAACTTGGATT+GGG | + | chr7_2:15593382-15593401 | Msa1050540:CDS | 35.0% | |
| !! | TTGAGTTGGATAACTATCTG+GGG | - | chr7_2:15593435-15593454 | None:intergenic | 35.0% |
| !! | GTTTGAGTTGGATAACTATC+TGG | - | chr7_2:15593437-15593456 | None:intergenic | 35.0% |
| AGATGAAGGTCTCACAAAAT+GGG | + | chr7_2:15593502-15593521 | Msa1050540:CDS | 35.0% | |
| TACCCTTCTATGGTTACAAA+TGG | + | chr7_2:15593564-15593583 | Msa1050540:CDS | 35.0% | |
| CTCCATTTGTAACCATAGAA+GGG | - | chr7_2:15593569-15593588 | None:intergenic | 35.0% | |
| ACTCCATTTGTAACCATAGA+AGG | - | chr7_2:15593570-15593589 | None:intergenic | 35.0% | |
| CTATGGTTACAAATGGAGTT+TGG | + | chr7_2:15593571-15593590 | Msa1050540:CDS | 35.0% | |
| ! | TCCAAACAATCCATTTTGCT+TGG | - | chr7_2:15593786-15593805 | None:intergenic | 35.0% |
| ! | GGATATTTTGCTTGGCAAAT+TGG | + | chr7_2:15593803-15593822 | Msa1050540:CDS | 35.0% |
| AAGAAGCCTCTAAATTATCG+AGG | - | chr7_2:15593971-15593990 | None:intergenic | 35.0% | |
| TCTATCGCTATAAGTGATGT+TGG | - | chr7_2:15594037-15594056 | None:intergenic | 35.0% | |
| TAGGAACTCACAACAATAGA+TGG | + | chr7_2:15594274-15594293 | Msa1050540:intron | 35.0% | |
| ATCTAGTGTAAAGCATGTTG+TGG | + | chr7_2:15594677-15594696 | Msa1050540:CDS | 35.0% | |
| AAAAAAATTGGGGTAGAACC+TGG | - | chr7_2:15594714-15594733 | None:intergenic | 35.0% | |
| ! | CTTTTGCTTCAAGTCTTCAA+TGG | - | chr7_2:15594783-15594802 | None:intergenic | 35.0% |
| AAATATTGTTGTACGTTGGG+CGG | + | chr7_2:15594833-15594852 | Msa1050540:intron | 35.0% | |
| TTGCTTATAATAATGACCGG+AGG | + | chr7_2:15595001-15595020 | Msa1050540:intron | 35.0% | |
| TGCTTATAATAATGACCGGA+GGG | + | chr7_2:15595002-15595021 | Msa1050540:intron | 35.0% | |
| AGAGATAGACACAAAATAGG+TGG | + | chr7_2:15595154-15595173 | Msa1050540:intron | 35.0% | |
| ATAGACACAAAATAGGTGGT+TGG | + | chr7_2:15595158-15595177 | Msa1050540:intron | 35.0% | |
| GGTGGGATCTATTTAATGAT+GGG | - | chr7_2:15595185-15595204 | None:intergenic | 35.0% | |
| TGGTGGGATCTATTTAATGA+TGG | - | chr7_2:15595186-15595205 | None:intergenic | 35.0% | |
| ! | TGTGTCATTATCTCTCCAAA+TGG | + | chr7_2:15595230-15595249 | Msa1050540:intron | 35.0% |
| TCTTATCCATTTCCTCCATT+TGG | - | chr7_2:15595248-15595267 | None:intergenic | 35.0% | |
| ATGTATGTGTTGGATGAGTT+AGG | - | chr7_2:15595288-15595307 | None:intergenic | 35.0% | |
| ! | AGAGGCCTTATATCAATGTA+TGG | - | chr7_2:15595580-15595599 | None:intergenic | 35.0% |
| AGGATATCATAACAAGCAGA+TGG | - | chr7_2:15595623-15595642 | None:intergenic | 35.0% | |
| TTAAGAAGGAAAGTCAGAGA+AGG | - | chr7_2:15595646-15595665 | None:intergenic | 35.0% | |
| ! | CATAATTAAAAGGCACGTTG+TGG | + | chr7_2:15595681-15595700 | Msa1050540:intron | 35.0% |
| ATTGGTATTAATCTAGTGGC+TGG | + | chr7_2:15596219-15596238 | Msa1050540:intron | 35.0% | |
| TTGGTATTAATCTAGTGGCT+GGG | + | chr7_2:15596220-15596239 | Msa1050540:intron | 35.0% | |
| ! | TTGAACCAGGTTGAAACTTA+TGG | + | chr7_2:15596286-15596305 | Msa1050540:intron | 35.0% |
| TGTTACCATAAGTTTCAACC+TGG | - | chr7_2:15596294-15596313 | None:intergenic | 35.0% | |
| ACAACATATATTGTCAACCG+TGG | + | chr7_2:15596816-15596835 | Msa1050540:intron | 35.0% | |
| ! | AGGAATACTTTTCAGATCCA+CGG | - | chr7_2:15596836-15596855 | None:intergenic | 35.0% |
| !!! | GAAAAGTATTCCTCCGATTT+TGG | + | chr7_2:15596843-15596862 | Msa1050540:intron | 35.0% |
| !! | TGTTGACTCTATGTTGAAGA+AGG | + | chr7_2:15597021-15597040 | Msa1050540:intron | 35.0% |
| ACTGTTATAGAGAATCCCTT+TGG | - | chr7_2:15597101-15597120 | None:intergenic | 35.0% | |
| GCTTGCATATGAATTGTGTT+TGG | - | chr7_2:15597411-15597430 | None:intergenic | 35.0% | |
| !! | TTTTGGTGTGTCAAACAATG+TGG | - | chr7_2:15597551-15597570 | None:intergenic | 35.0% |
| ! | GTTCTTTACACCGTGATTTT+TGG | + | chr7_2:15597717-15597736 | Msa1050540:intron | 35.0% |
| !!! | ACCGTGATTTTTGGTTAACA+GGG | + | chr7_2:15597726-15597745 | Msa1050540:intron | 35.0% |
| TCCCTGTTAACCAAAAATCA+CGG | - | chr7_2:15597730-15597749 | None:intergenic | 35.0% | |
| ! | AGAGAGTTGTTTCCTACTAT+AGG | + | chr7_2:15598030-15598049 | Msa1050540:intron | 35.0% |
| ! | GAGAGTTGTTTCCTACTATA+GGG | + | chr7_2:15598031-15598050 | Msa1050540:intron | 35.0% |
| AGGTGATGTAGAAAGATAGT+GGG | - | chr7_2:15598200-15598219 | None:intergenic | 35.0% | |
| !!! | TTTTTGATTTTGGACCATGC+AGG | - | chr7_2:15598220-15598239 | None:intergenic | 35.0% |
| GGATTCGAAAACACAAACAA+AGG | + | chr7_2:15598724-15598743 | Msa1050540:CDS | 35.0% | |
| !! | TTGTTGACTCTTCTCTTGCT+TGG | - | chr7_2:15592681-15592700 | None:intergenic | 40.0% |
| CAAATTGTTTCGGATACGTG+AGG | - | chr7_2:15592729-15592748 | None:intergenic | 40.0% | |
| ! | CAAGAGGAACGAATGCTTTT+TGG | - | chr7_2:15592790-15592809 | None:intergenic | 40.0% |
| ATTGGAGTTGGAGAATCATG+AGG | - | chr7_2:15592824-15592843 | None:intergenic | 40.0% | |
| CAGCGTTTGTAGAGGAAAAT+TGG | - | chr7_2:15592842-15592861 | None:intergenic | 40.0% | |
| TTTAATGGCAGCGTTTGTAG+AGG | - | chr7_2:15592850-15592869 | None:intergenic | 40.0% | |
| TCTACAAACGCTGCCATTAA+AGG | + | chr7_2:15592849-15592868 | Msa1050540:CDS | 40.0% | |
| CTGCCATTAAAGGTGGTTAT+TGG | + | chr7_2:15592859-15592878 | Msa1050540:CDS | 40.0% | |
| GGTGGTTATTGGTATTCTGA+TGG | + | chr7_2:15592870-15592889 | Msa1050540:CDS | 40.0% | |
| GATCAATCTCAGAAACTGCA+AGG | - | chr7_2:15592899-15592918 | None:intergenic | 40.0% | |
| CTGCAAATGCACAAAACAAG+TGG | - | chr7_2:15592935-15592954 | None:intergenic | 40.0% | |
| ! | CTTGGTTGGTATTAGGATCA+AGG | - | chr7_2:15592959-15592978 | None:intergenic | 40.0% |
| !! | ATGGTGACTTGGTTGGTATT+AGG | - | chr7_2:15592966-15592985 | None:intergenic | 40.0% |
| !! | AGAAGAAATGGTGACTTGGT+TGG | - | chr7_2:15592973-15592992 | None:intergenic | 40.0% |
| AGCTGCGTTTGTAGAAGAAA+TGG | - | chr7_2:15592985-15593004 | None:intergenic | 40.0% | |
| ! | ACGCTTTTATCAATTGGTGG+TGG | + | chr7_2:15593056-15593075 | Msa1050540:CDS | 40.0% |
| !!! | CTTTTATCAATTGGTGGTGG+TGG | + | chr7_2:15593059-15593078 | Msa1050540:CDS | 40.0% |
| TGTGCTTTAGTAGAACGTTC+AGG | - | chr7_2:15593086-15593105 | None:intergenic | 40.0% | |
| ! | TATGAACGATTTTCGGCTAC+TGG | - | chr7_2:15593135-15593154 | None:intergenic | 40.0% |
| GCCAGAAATAACAACTTCCA+TGG | + | chr7_2:15593173-15593192 | Msa1050540:CDS | 40.0% | |
| !! | GCCATGGAAGTTGTTATTTC+TGG | - | chr7_2:15593177-15593196 | None:intergenic | 40.0% |
| ! | GTCATTTCAACTTCTGAGGA+TGG | - | chr7_2:15593221-15593240 | None:intergenic | 40.0% |
| GTTGGTCATTTCAACTTCTG+AGG | - | chr7_2:15593225-15593244 | None:intergenic | 40.0% | |
| !! | TTGGTTTTCTCATTACAGCG+TGG | + | chr7_2:15593246-15593265 | Msa1050540:CDS | 40.0% |
| TGTTTGCAACATCTTGACCT+GGG | - | chr7_2:15593373-15593392 | None:intergenic | 40.0% | |
| TTGTTTGCAACATCTTGACC+TGG | - | chr7_2:15593374-15593393 | None:intergenic | 40.0% | |
| !! | AGTTGGGTTTTTCAAAGGAG+CGG | - | chr7_2:15593468-15593487 | None:intergenic | 40.0% |
| GACCTTCATCTGCACTAAAT+TGG | - | chr7_2:15593493-15593512 | None:intergenic | 40.0% | |
| CAGATGAAGGTCTCACAAAA+TGG | + | chr7_2:15593501-15593520 | Msa1050540:CDS | 40.0% | |
| AAGGTCTCACAAAATGGGTA+GGG | + | chr7_2:15593507-15593526 | Msa1050540:CDS | 40.0% | |
| !! | CCAAGTGCAAGTTTGCTTTT+TGG | - | chr7_2:15593542-15593561 | None:intergenic | 40.0% |
| CCAAAAAGCAAACTTGCACT+TGG | + | chr7_2:15593539-15593558 | Msa1050540:CDS | 40.0% | |
| TTCAAAGGGACAGATTGGTA+TGG | + | chr7_2:15593719-15593738 | Msa1050540:CDS | 40.0% | |
| GTTGCTTATGCCAAGCAAAA+TGG | + | chr7_2:15593773-15593792 | Msa1050540:CDS | 40.0% | |
| !! | GCCAAGCAAAATGGATTGTT+TGG | + | chr7_2:15593782-15593801 | Msa1050540:CDS | 40.0% |
| AATTGGACTCTTTCTCAAGC+AGG | + | chr7_2:15593836-15593855 | Msa1050540:CDS | 40.0% | |
| GGTCATCCTCGATAATTTAG+AGG | + | chr7_2:15593962-15593981 | Msa1050540:intron | 40.0% | |
| ! | AGAGCATCCCCTTTATACAT+TGG | - | chr7_2:15594185-15594204 | None:intergenic | 40.0% |
| ! | TTTTTGCAGCTTCTCAAGCT+TGG | + | chr7_2:15594649-15594668 | Msa1050540:intron | 40.0% |
| ! | TTTTGCAGCTTCTCAAGCTT+GGG | + | chr7_2:15594650-15594669 | Msa1050540:intron | 40.0% |
| !! | AACTCGTTTTGGATATCAGC+AGG | - | chr7_2:15595113-15595132 | None:intergenic | 40.0% |
| ! | TAGAGGATCTCAACTCGTTT+TGG | - | chr7_2:15595124-15595143 | None:intergenic | 40.0% |
| GTCATTATCTCTCCAAATGG+AGG | + | chr7_2:15595233-15595252 | Msa1050540:intron | 40.0% | |
| ATCTCTCCAAATGGAGGAAA+TGG | + | chr7_2:15595239-15595258 | Msa1050540:intron | 40.0% | |
| AATGTCCTGAGAACAATCGT+TGG | - | chr7_2:15595463-15595482 | None:intergenic | 40.0% | |
| CTCTGACTTTCCTTCTTAAG+TGG | + | chr7_2:15595647-15595666 | Msa1050540:intron | 40.0% | |
| AGCATATGCATGAAACTCAC+CGG | + | chr7_2:15596175-15596194 | Msa1050540:intron | 40.0% | |
| GGATCATAGTGAATTGAACC+AGG | + | chr7_2:15596273-15596292 | Msa1050540:intron | 40.0% | |
| GTAACATATCCTCACATGTG+AGG | + | chr7_2:15596308-15596327 | Msa1050540:intron | 40.0% | |
| CGAATACTGCAAAAGTCACT+TGG | + | chr7_2:15596484-15596503 | Msa1050540:intron | 40.0% | |
| GATATGCGACACTAATGATG+TGG | - | chr7_2:15596691-15596710 | None:intergenic | 40.0% | |
| AGTGTCGCATATCAACAGAT+AGG | + | chr7_2:15596698-15596717 | Msa1050540:intron | 40.0% | |
| AGTAGATCATCCAAAATCGG+AGG | - | chr7_2:15596856-15596875 | None:intergenic | 40.0% | |
| TGAAATTGATGAGTGGTACG+AGG | - | chr7_2:15597069-15597088 | None:intergenic | 40.0% | |
| !!! | GAAGACTTGGTGAAGTCTTT+TGG | - | chr7_2:15597675-15597694 | None:intergenic | 40.0% |
| ATCACGGTGTAAAGAACAAG+TGG | - | chr7_2:15597714-15597733 | None:intergenic | 40.0% | |
| !!! | CACCGTGATTTTTGGTTAAC+AGG | + | chr7_2:15597725-15597744 | Msa1050540:intron | 40.0% |
| TCTTCACTCTAATCGCTTGA+AGG | + | chr7_2:15597979-15597998 | Msa1050540:intron | 40.0% | |
| CTAATCGCTTGAAGGACAAA+TGG | + | chr7_2:15597987-15598006 | Msa1050540:intron | 40.0% | |
| ! | AAATGGTTGGGGTTTAGCTT+GGG | + | chr7_2:15598004-15598023 | Msa1050540:intron | 40.0% |
| !! | TAGAAAGATAGTGGGGGATT+GGG | - | chr7_2:15598192-15598211 | None:intergenic | 40.0% |
| ! | GTGATGTAGAAAGATAGTGG+GGG | - | chr7_2:15598198-15598217 | None:intergenic | 40.0% |
| GGTGATGTAGAAAGATAGTG+GGG | - | chr7_2:15598199-15598218 | None:intergenic | 40.0% | |
| CAGGTGATGTAGAAAGATAG+TGG | - | chr7_2:15598201-15598220 | None:intergenic | 40.0% | |
| ATCTTTCTACATCACCTGCA+TGG | + | chr7_2:15598203-15598222 | Msa1050540:intron | 40.0% | |
| TTCAGTAACAAGTTGCCTTC+AGG | - | chr7_2:15598452-15598471 | None:intergenic | 40.0% | |
| TTCAGAAGCGACTTAACTTC+AGG | - | chr7_2:15598488-15598507 | None:intergenic | 40.0% | |
| !! | TTCAGAAGCGTCTTAACTTC+AGG | - | chr7_2:15598525-15598544 | None:intergenic | 40.0% |
| GCTTCTGATGATATGACTTC+TGG | - | chr7_2:15598578-15598597 | None:intergenic | 40.0% | |
| TGGTGAAATAGCTTCTGATG+AGG | - | chr7_2:15598633-15598652 | None:intergenic | 40.0% | |
| CTTATCGTTCCCAAGCTAGT+CGG | + | chr7_2:15592580-15592599 | Msa1050540:five_prime_UTR | 45.0% | |
| !! | CATCCAATTCCGACTAGCTT+GGG | - | chr7_2:15592592-15592611 | None:intergenic | 45.0% |
| TGTTTCGGATACGTGAGGTT+AGG | - | chr7_2:15592724-15592743 | None:intergenic | 45.0% | |
| TGAGGAGAGTGGAAATCAAG+AGG | - | chr7_2:15592806-15592825 | None:intergenic | 45.0% | |
| TTGGAGAATCATGAGGAGAG+TGG | - | chr7_2:15592817-15592836 | None:intergenic | 45.0% | |
| ACAAACGCTGCCATTAAAGG+TGG | + | chr7_2:15592852-15592871 | Msa1050540:CDS | 45.0% | |
| GATACAGCCAGTCAAGATCA+AGG | - | chr7_2:15593199-15593218 | None:intergenic | 45.0% | |
| GCAGCAGATAACAACAGTAC+CGG | - | chr7_2:15593311-15593330 | None:intergenic | 45.0% | |
| ACTGTTGTTATCTGCTGCAG+TGG | + | chr7_2:15593313-15593332 | Msa1050540:CDS | 45.0% | |
| CTGTTGTTATCTGCTGCAGT+GGG | + | chr7_2:15593314-15593333 | Msa1050540:CDS | 45.0% | |
| ! | ACTCCATTGAAGTACTACCC+AGG | + | chr7_2:15593353-15593372 | Msa1050540:CDS | 45.0% |
| TGACCTGGGTAGTACTTCAA+TGG | - | chr7_2:15593359-15593378 | None:intergenic | 45.0% | |
| !! | GTTGGGTTTTTCAAAGGAGC+GGG | - | chr7_2:15593467-15593486 | None:intergenic | 45.0% |
| ! | GCTCCTTTGAAAAACCCAAC+TGG | + | chr7_2:15593467-15593486 | Msa1050540:CDS | 45.0% |
| !! | TGGCCAGTTGGGTTTTTCAA+AGG | - | chr7_2:15593473-15593492 | None:intergenic | 45.0% |
| CTGCACTAAATTGGCCAGTT+GGG | - | chr7_2:15593484-15593503 | None:intergenic | 45.0% | |
| TCTGCACTAAATTGGCCAGT+TGG | - | chr7_2:15593485-15593504 | None:intergenic | 45.0% | |
| GGCCAATTTAGTGCAGATGA+AGG | + | chr7_2:15593488-15593507 | Msa1050540:CDS | 45.0% | |
| GAAGGTCTCACAAAATGGGT+AGG | + | chr7_2:15593506-15593525 | Msa1050540:CDS | 45.0% | |
| CTCACAAAATGGGTAGGGTT+AGG | + | chr7_2:15593512-15593531 | Msa1050540:CDS | 45.0% | |
| GCACTTGGTTTACCCTTCTA+TGG | + | chr7_2:15593554-15593573 | Msa1050540:CDS | 45.0% | |
| ACTGCTTCAAAGGGACAGAT+TGG | + | chr7_2:15593714-15593733 | Msa1050540:CDS | 45.0% | |
| CACTCAGAGTATATCTGCCA+AGG | + | chr7_2:15593751-15593770 | Msa1050540:CDS | 45.0% | |
| TTGCTTGGCATAAGCAACCT+TGG | - | chr7_2:15593771-15593790 | None:intergenic | 45.0% | |
| TTTGCAGCTTCTCAAGCTTG+GGG | + | chr7_2:15594651-15594670 | Msa1050540:intron | 45.0% | |
| ATGTTACAACGTACACCCTC+CGG | - | chr7_2:15595020-15595039 | None:intergenic | 45.0% | |
| TCTTGCCAACGATTGTTCTC+AGG | + | chr7_2:15595455-15595474 | Msa1050540:intron | 45.0% | |
| AGAAGGAAAGTCAGAGAAGG+AGG | - | chr7_2:15595643-15595662 | None:intergenic | 45.0% | |
| ! | GATTTGCTTCATAGCTAGGC+CGG | - | chr7_2:15596197-15596216 | None:intergenic | 45.0% |
| ATCCTCACATGTGAGGAATG+TGG | + | chr7_2:15596315-15596334 | Msa1050540:intron | 45.0% | |
| TCCTCACATGTGAGGAATGT+GGG | + | chr7_2:15596316-15596335 | Msa1050540:intron | 45.0% | |
| TCGCTTGAAGGACAAATGGT+TGG | + | chr7_2:15597991-15598010 | Msa1050540:intron | 45.0% | |
| CGCTTGAAGGACAAATGGTT+GGG | + | chr7_2:15597992-15598011 | Msa1050540:intron | 45.0% | |
| GCTTGAAGGACAAATGGTTG+GGG | + | chr7_2:15597993-15598012 | Msa1050540:intron | 45.0% | |
| CAAATGGTTGGGGTTTAGCT+TGG | + | chr7_2:15598003-15598022 | Msa1050540:intron | 45.0% | |
| TGTGGTGGTAGAAGATAGTG+TGG | - | chr7_2:15598126-15598145 | None:intergenic | 45.0% | |
| !! | AGAAAGATAGTGGGGGATTG+GGG | - | chr7_2:15598191-15598210 | None:intergenic | 45.0% |
| !! | GTAGAAAGATAGTGGGGGAT+TGG | - | chr7_2:15598193-15598212 | None:intergenic | 45.0% |
| CTTCTGGACTTCTTGTCTTC+AGG | - | chr7_2:15598562-15598581 | None:intergenic | 45.0% | |
| ACCAGAAGCTGAATCTCAAC+TGG | + | chr7_2:15598649-15598668 | Msa1050540:CDS | 45.0% | |
| TCCAGTTGAGATTCAGCTTC+TGG | - | chr7_2:15598653-15598672 | None:intergenic | 45.0% | |
| !!! | AAAAAATAAGTTATTTTTTA+CGG | - | chr7_2:15594333-15594352 | None:intergenic | 5.0% |
| !!! | TATTAAAAAATATTTTGTTT+TGG | + | chr7_2:15594359-15594378 | Msa1050540:intron | 5.0% |
| !!! | ATTTTTTTTTTTATGATTTT+TGG | - | chr7_2:15595345-15595364 | None:intergenic | 5.0% |
| !!! | ATAAAAAAAAAAATTTTTAC+AGG | + | chr7_2:15595351-15595370 | Msa1050540:intron | 5.0% |
| GTTCCCAAGCTAGTCGGAAT+TGG | + | chr7_2:15592586-15592605 | Msa1050540:five_prime_UTR | 50.0% | |
| ! | CCATCCAATTCCGACTAGCT+TGG | - | chr7_2:15592593-15592612 | None:intergenic | 50.0% |
| CCAAGCTAGTCGGAATTGGA+TGG | + | chr7_2:15592590-15592609 | Msa1050540:five_prime_UTR | 50.0% | |
| !! | ACTGGCTTGGCTAGACATGT+TGG | - | chr7_2:15593117-15593136 | None:intergenic | 50.0% |
| !! | ACGATTTTCGGCTACTGGCT+TGG | - | chr7_2:15593130-15593149 | None:intergenic | 50.0% |
| ! | TCCATGGCCTTGATCTTGAC+TGG | + | chr7_2:15593189-15593208 | Msa1050540:CDS | 50.0% |
| !! | TAACAACAGTACCGGCTTGC+CGG | - | chr7_2:15593303-15593322 | None:intergenic | 50.0% |
| TTGTTATCTGCTGCAGTGGG+TGG | + | chr7_2:15593317-15593336 | Msa1050540:CDS | 50.0% | |
| AGTAAAGCTACGCAGGGACT+AGG | + | chr7_2:15593620-15593639 | Msa1050540:CDS | 50.0% | |
| GTAAAGCTACGCAGGGACTA+GGG | + | chr7_2:15593621-15593640 | Msa1050540:CDS | 50.0% | |
| TAAAGCTACGCAGGGACTAG+GGG | + | chr7_2:15593622-15593641 | Msa1050540:CDS | 50.0% | |
| ACTAGGGGCAGTGAAGTACA+AGG | + | chr7_2:15593637-15593656 | Msa1050540:CDS | 50.0% | |
| GTTGTGGCTATAGTCACACC+AGG | + | chr7_2:15594693-15594712 | Msa1050540:CDS | 50.0% | |
| TGATGAGTGGTACGAGGCAT+TGG | - | chr7_2:15597063-15597082 | None:intergenic | 50.0% | |
| CTCGAGTGAAGACGAAGACT+TGG | - | chr7_2:15597688-15597707 | None:intergenic | 50.0% | |
| GCCAGTCAAGATCAAGGCCA+TGG | - | chr7_2:15593193-15593212 | None:intergenic | 55.0% | |
| GCCGCAGAGTCTAGTAGTTC+CGG | + | chr7_2:15593281-15593300 | Msa1050540:CDS | 55.0% | |
| GCCGGAACTACTAGACTCTG+CGG | - | chr7_2:15593285-15593304 | None:intergenic | 55.0% | |
| GTCTAGTAGTTCCGGCAAGC+CGG | + | chr7_2:15593289-15593308 | Msa1050540:CDS | 55.0% | |
| GCGGGTGGTTGTGTTTGAGT+TGG | - | chr7_2:15593449-15593468 | None:intergenic | 55.0% | |
| !! | GGGTTTTTCAAAGGAGCGGG+TGG | - | chr7_2:15593464-15593483 | None:intergenic | 55.0% |
| GCCCACATTCCTCACATGTG+AGG | - | chr7_2:15596320-15596339 | None:intergenic | 55.0% | |
| TACCACCACACACTCCTCCA+TGG | + | chr7_2:15598136-15598155 | Msa1050540:intron | 55.0% | |
| ! | AGTGACCATGGAGGAGTGTG+TGG | - | chr7_2:15598144-15598163 | None:intergenic | 55.0% |
| TGGCAGATGAGTGACCATGG+AGG | - | chr7_2:15598153-15598172 | None:intergenic | 55.0% | |
| AGGTGGCAGATGAGTGACCA+TGG | - | chr7_2:15598156-15598175 | None:intergenic | 55.0% | |
| TAGTGGGGGATTGGGGTGAT+GGG | - | chr7_2:15598184-15598203 | None:intergenic | 55.0% | |
| ! | ATAGTGGGGGATTGGGGTGA+TGG | - | chr7_2:15598185-15598204 | None:intergenic | 55.0% |
| TGAAGCTTGGACGCTCCTGA+AGG | + | chr7_2:15598434-15598453 | Msa1050540:intron | 55.0% | |
| TACAGCGTGGAGAGCTGCTG+TGG | + | chr7_2:15593259-15593278 | Msa1050540:CDS | 60.0% | |
| ! | GACCATGGAGGAGTGTGTGG+TGG | - | chr7_2:15598141-15598160 | None:intergenic | 60.0% |
| AGTGGGGGATTGGGGTGATG+GGG | - | chr7_2:15598183-15598202 | None:intergenic | 60.0% | |
| !! | GATTGGGGTGATGGGGGTGG+AGG | - | chr7_2:15598176-15598195 | None:intergenic | 65.0% |
| ! | GTGGGGGATTGGGGTGATGG+GGG | - | chr7_2:15598182-15598201 | None:intergenic | 65.0% |
| !! | TGGGGTGATGGGGGTGGAGG+TGG | - | chr7_2:15598173-15598192 | None:intergenic | 70.0% |
| !! | GGGGATTGGGGTGATGGGGG+TGG | - | chr7_2:15598179-15598198 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 15592562 | 15598751 | 15592562 | ID=Msa1050540;Name=Msa1050540 |
| chr7_2 | mRNA | 15592562 | 15598751 | 15592562 | ID=Msa1050540-mRNA-1;Parent=Msa1050540;Name=Msa1050540-mRNA-1;_AED=0.20;_eAED=0.20;_QI=215|0.5|0.33|0.66|1|1|3|0|451 |
| chr7_2 | exon | 15592562 | 15593857 | 15592562 | ID=Msa1050540-mRNA-1:exon:3663;Parent=Msa1050540-mRNA-1 |
| chr7_2 | exon | 15594658 | 15594714 | 15594658 | ID=Msa1050540-mRNA-1:exon:3664;Parent=Msa1050540-mRNA-1 |
| chr7_2 | exon | 15598534 | 15598751 | 15598534 | ID=Msa1050540-mRNA-1:exon:3665;Parent=Msa1050540-mRNA-1 |
| chr7_2 | five_prime_UTR | 15592562 | 15592776 | 15592562 | ID=Msa1050540-mRNA-1:five_prime_utr;Parent=Msa1050540-mRNA-1 |
| chr7_2 | CDS | 15592777 | 15593857 | 15592777 | ID=Msa1050540-mRNA-1:cds;Parent=Msa1050540-mRNA-1 |
| chr7_2 | CDS | 15594658 | 15594714 | 15594658 | ID=Msa1050540-mRNA-1:cds;Parent=Msa1050540-mRNA-1 |
| chr7_2 | CDS | 15598534 | 15598751 | 15598534 | ID=Msa1050540-mRNA-1:cds;Parent=Msa1050540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
