AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0964150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0964150 MtrunA17_Chr6g0483971 87.407 135 9 2 1 127 1 135 1.91e-78 236
Msa0964150 MtrunA17_Chr6g0484021 59.211 152 37 3 1 127 21 172 1.09e-51 174
Msa0964150 MtrunA17_Chr6g0484041 54.658 161 52 4 1 140 13 173 1.37e-47 163
Msa0964150 MtrunA17_Chr6g0484031 54.422 147 48 3 1 132 1 143 7.17e-43 149
Msa0964150 MtrunA17_Chr1g0190651 47.328 131 54 3 10 127 9 137 1.28e-37 126
Msa0964150 MtrunA17_Chr1g0190671 46.565 131 55 3 10 127 9 137 8.64e-37 124
Msa0964150 MtrunA17_Chr1g0190641 48.000 125 52 3 13 127 11 132 1.57e-36 124
Msa0964150 MtrunA17_Chr1g0190661 42.969 128 62 2 11 127 10 137 8.91e-35 119
Msa0964150 MtrunA17_Chr7g0274181 45.690 116 51 3 27 132 69 182 2.08e-29 107
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0964150 AT3G04720.1 39.669 121 65 1 20 132 69 189 1.08e-26 101

Find 88 sgRNAs with CRISPR-Local

Find 591 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCAGGTCGTGACTCTTAT+TGG 0.215952 6_3:-90477696 Msa0964150:intron
ACAATCCTCATAAAATTAAA+TGG 0.257556 6_3:-90485943 Msa0964150:CDS
ACGGTGGTGTCCGAGGCATT+AGG 0.305181 6_3:+90478534 None:intergenic
TTGTCATGGCGTAGTGAATT+TGG 0.312460 6_3:-90485869 Msa0964150:CDS
TGGAAAAGAGCAGTCGTTAT+AGG 0.323625 6_3:-90477676 Msa0964150:intron
CAGGTGACAAACAAAGAAAA+TGG 0.324037 6_3:-90484970 Msa0964150:CDS
CGGTGGTGTCCGAGGCATTA+GGG 0.325676 6_3:+90478535 None:intergenic
TCGGTGGCCGTGTCAACATC+AGG 0.354715 6_3:+90478630 None:intergenic
GGCGGCGGTGTCCGAGGCGG+CGG 0.371119 6_3:+90478593 None:intergenic
AAGGTAACTTTGAGCATTCC+CGG 0.379943 6_3:+90484849 None:intergenic
GTCCGAGGCGGCGGTGCTGC+AGG 0.380702 6_3:+90478602 None:intergenic
TATCATTCTTTGCTCTAAAC+CGG 0.397559 6_3:+90477433 None:intergenic
GGCGATGGTGTCCGAGGCGG+CGG 0.406970 6_3:+90478497 None:intergenic
CGCCTGCAGCACCGCCGCCT+CGG 0.410402 6_3:-90478604 Msa0964150:three_prime_UTR
GAATGCTCAAAGTTACCTTA+TGG 0.411312 6_3:-90484845 Msa0964150:intron
CCACAAACACCTTTGCCAAC+AGG 0.421503 6_3:+90485827 None:intergenic
CTCGGACACCACCGCCGCCT+CGG 0.431747 6_3:-90478508 Msa0964150:three_prime_UTR
AAATGGAACTTGAACACATC+TGG 0.431997 6_3:-90485926 Msa0964150:CDS
TATTGATGTGTTTCAAAAGC+TGG 0.434145 6_3:-90484884 Msa0964150:CDS
TGCAACAATTGTAGCATTGT+TGG 0.438961 6_3:-90477514 Msa0964150:three_prime_UTR
GGCGGTGCTGCAGGCGATGT+CGG 0.442340 6_3:+90478611 None:intergenic
GGCGGCTCTGTCGGAGGTGG+TGG 0.443931 6_3:+90478677 None:intergenic
TTTCAAAAGCTGGATAGCTC+TGG 0.449489 6_3:-90484874 Msa0964150:CDS
GGCGGTGGTGTCCGAGGCGA+CGG 0.460119 6_3:+90478515 None:intergenic
TCTGTCGGAGGTGGTGGTGC+CGG 0.466537 6_3:+90478683 None:intergenic
AGTGTCGGTGGCGGCTCTGT+CGG 0.466709 6_3:+90478668 None:intergenic
TGGTGTGTTCTGTGCAGCTC+AGG 0.478988 6_3:-90485906 Msa0964150:CDS
GATGGTGTCCGAGGCGGCGG+TGG 0.480388 6_3:+90478500 None:intergenic
TTCTGTGGACCTGTTGGCAA+AGG 0.480910 6_3:-90485836 Msa0964150:CDS
GGCGATGGTGTCAGAGGCGG+CGG 0.484926 6_3:+90478575 None:intergenic
CTTTAGATCTAGTCAGTGGC+GGG 0.493161 6_3:+90478456 None:intergenic
CACTGACACCCCTAATGCCT+CGG 0.498137 6_3:-90478544 Msa0964150:three_prime_UTR
GGCGGCGGCGGTGTCCGAGG+CGG 0.498744 6_3:+90478590 None:intergenic
CAAGCAGATTGCAACACAAA+AGG 0.506725 6_3:-90483618 Msa0964150:intron
TTTGGCTGGACTGCCTTCTG+TGG 0.508213 6_3:-90485851 Msa0964150:CDS
AGGTGACAAACAAAGAAAAT+GGG 0.510288 6_3:-90484969 Msa0964150:CDS
GGTGGCGGCTCTGTCGGAGG+TGG 0.511900 6_3:+90478674 None:intergenic
GTTGGTGGCGTCAAAGGCGA+TGG 0.512688 6_3:+90478482 None:intergenic
CTCGGACACCACCGTCGCCT+CGG 0.517112 6_3:-90478526 Msa0964150:three_prime_UTR
GGTGTCGGTGGCTTTAGTGT+CGG 0.525730 6_3:+90478653 None:intergenic
AACACAAAAGGTGGGAATTG+TGG 0.528169 6_3:-90483606 Msa0964150:CDS
CGTGTCAACATCAGGGGTGT+CGG 0.529817 6_3:+90478638 None:intergenic
TGTTCTGTGCAGCTCAGGAT+GGG 0.532727 6_3:-90485901 Msa0964150:CDS
TAGTCCGCAGCTACGACATC+CGG 0.534937 6_3:-90478702 Msa0964150:three_prime_UTR
CGGTGGCCGTGTCAACATCA+GGG 0.537011 6_3:+90478631 None:intergenic
GATGGTGTCAGAGGCGGCGG+CGG 0.537109 6_3:+90478578 None:intergenic
AGCTGGATAGCTCTGGGACC+GGG 0.539373 6_3:-90484867 Msa0964150:CDS
CATGGCGTAGTGAATTTGGC+TGG 0.539611 6_3:-90485865 Msa0964150:CDS
AGGGGTGTCAGTGGCATCAA+AGG 0.542404 6_3:+90478554 None:intergenic
ACTGCCTTCTGTGGACCTGT+TGG 0.548588 6_3:-90485842 Msa0964150:CDS
AAGCTGGATAGCTCTGGGAC+CGG 0.549261 6_3:-90484868 Msa0964150:CDS
GTGTTCTGTGCAGCTCAGGA+TGG 0.554622 6_3:-90485902 Msa0964150:CDS
TTAGATCTAGTCAGTGGCGG+GGG 0.560383 6_3:+90478458 None:intergenic
GCAGATTGCAACACAAAAGG+TGG 0.560958 6_3:-90483615 Msa0964150:intron
ATCTAACTCAAGCCCTCCGT+TGG 0.561496 6_3:+90484906 None:intergenic
TTCAAAAGCTGGATAGCTCT+GGG 0.561619 6_3:-90484873 Msa0964150:CDS
AGAGGCGGCGGCGGTGTCCG+AGG 0.565433 6_3:+90478587 None:intergenic
GTCGGTGGCGGCTCTGTCGG+AGG 0.567932 6_3:+90478671 None:intergenic
GTCAACATCAGGGGTGTCGG+TGG 0.568241 6_3:+90478641 None:intergenic
GTCAGTGGCATCAAAGGCGA+TGG 0.575568 6_3:+90478560 None:intergenic
CGACACCCCTGATGTTGACA+CGG 0.579165 6_3:-90478637 Msa0964150:three_prime_UTR
TTATATACATCAGTTTGCAA+AGG 0.579269 6_3:-90478761 Msa0964150:intron
GGTGGTGTCCGAGGCGACGG+TGG 0.581330 6_3:+90478518 None:intergenic
CGAGGCGGCGGTGGTGTCCG+AGG 0.582800 6_3:+90478509 None:intergenic
CGAGGCGACGGTGGTGTCCG+AGG 0.582800 6_3:+90478527 None:intergenic
TTGATACATGCACCAACGGA+GGG 0.588242 6_3:-90484918 Msa0964150:CDS
CCACTGACTAGATCTAAAGT+TGG 0.589137 6_3:-90478452 Msa0964150:intron
ATCAAAGGCGATGGTGTCAG+AGG 0.589897 6_3:+90478569 None:intergenic
CGAGGCATTAGGGGTGTCAG+TGG 0.597436 6_3:+90478545 None:intergenic
GGTGCTGCAGGCGATGTCGG+TGG 0.597726 6_3:+90478614 None:intergenic
ATGGGAACAAATCATTGTCA+TGG 0.598375 6_3:-90485883 Msa0964150:CDS
GGTGGCTTTAGTGTCGGTGG+CGG 0.603129 6_3:+90478659 None:intergenic
GTCGGTGGCTTTAGTGTCGG+TGG 0.603309 6_3:+90478656 None:intergenic
TTTAGATCTAGTCAGTGGCG+GGG 0.611875 6_3:+90478457 None:intergenic
CAGATTGCAACACAAAAGGT+GGG 0.617928 6_3:-90483614 Msa0964150:CDS
GTCAAAGGCGATGGTGTCCG+AGG 0.618386 6_3:+90478491 None:intergenic
AAAGGCGATGGTGTCAGAGG+CGG 0.628201 6_3:+90478572 None:intergenic
GGTGGTGTCCGAGGCATTAG+GGG 0.628755 6_3:+90478536 None:intergenic
ACTTTAGATCTAGTCAGTGG+CGG 0.633015 6_3:+90478455 None:intergenic
GGTGGCCGTGTCAACATCAG+GGG 0.639016 6_3:+90478632 None:intergenic
TTTGCCAACAGGTCCACAGA+AGG 0.647196 6_3:+90485838 None:intergenic
TCAAAGAGCTAACAACGTGA+AGG 0.649689 6_3:-90485981 Msa0964150:CDS
GTTGATACATGCACCAACGG+AGG 0.651216 6_3:-90484919 Msa0964150:CDS
ATTGTTGATACATGCACCAA+CGG 0.654994 6_3:-90484922 Msa0964150:CDS
AAAGGCGATGGTGTCCGAGG+CGG 0.660391 6_3:+90478494 None:intergenic
GTAGTAATACCAACTGCTCG+AGG 0.673768 6_3:+90483501 None:intergenic
GGTGCCGGATGTCGTAGCTG+CGG 0.715606 6_3:+90478698 None:intergenic
CCAACTTTAGATCTAGTCAG+TGG 0.720841 6_3:+90478452 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTCAATATAAACAAATT+TGG + chr6_3:90478095-90478114 None:intergenic 10.0%
!! AAAAAGTTATATATTTGTTT+GGG - chr6_3:90478293-90478312 Msa0964150:intron 10.0%
!! ACAATAAATAAATACTTAAT+AGG - chr6_3:90478873-90478892 Msa0964150:intron 10.0%
!!! AATGAAATATTTTAATATCA+TGG - chr6_3:90478945-90478964 Msa0964150:intron 10.0%
!!! AATAAACTTTTATTTTTTGT+CGG - chr6_3:90479615-90479634 Msa0964150:intron 10.0%
!!! AACAATATTTTACATATTTA+TGG - chr6_3:90480845-90480864 Msa0964150:intron 10.0%
!!! TATTTTTAAATTTCTTTTGA+CGG + chr6_3:90485714-90485733 None:intergenic 10.0%
!!! ATAATAATTTGTTATTTTAG+AGG - chr6_3:90485964-90485983 Msa0964150:CDS 10.0%
!! AATTTACTTAAGATTTAAGA+CGG + chr6_3:90477771-90477790 None:intergenic 15.0%
!!! GCTTAAGTATTTTTTTTTTA+AGG + chr6_3:90477804-90477823 None:intergenic 15.0%
!! TTAGTTATTCCTAATAAATA+GGG + chr6_3:90477955-90477974 None:intergenic 15.0%
!!! AAAAAGCATTTTACATATTA+CGG - chr6_3:90478156-90478175 Msa0964150:intron 15.0%
!! CAAAAAGTTATATATTTGTT+TGG - chr6_3:90478292-90478311 Msa0964150:intron 15.0%
!! TATTGTTTACTTCATATATA+TGG - chr6_3:90478394-90478413 Msa0964150:intron 15.0%
!! TTATTAATCAATAAAGTTCT+AGG + chr6_3:90478430-90478449 None:intergenic 15.0%
!!! TTAAAATTTTGATACATTGA+AGG - chr6_3:90479005-90479024 Msa0964150:intron 15.0%
!! ATTATAGAAAAATGTTAATG+AGG - chr6_3:90479130-90479149 Msa0964150:intron 15.0%
!!! TGAACTTTATTTTTTAAATC+TGG - chr6_3:90479183-90479202 Msa0964150:intron 15.0%
!!! GAACTTTATTTTTTAAATCT+GGG - chr6_3:90479184-90479203 Msa0964150:intron 15.0%
!!! AGTTTTTAAAAAATTACAGT+GGG - chr6_3:90479555-90479574 Msa0964150:intron 15.0%
!! TGTTAATTTCAATTATAGAA+AGG + chr6_3:90479669-90479688 None:intergenic 15.0%
!!! TCTTAATTTTATTTTTTGTG+AGG - chr6_3:90479742-90479761 Msa0964150:intron 15.0%
!!! AAAATTCTAAAACAGATTTA+AGG + chr6_3:90479773-90479792 None:intergenic 15.0%
!! TATTAATGTTTAACCAAAAT+TGG - chr6_3:90479809-90479828 Msa0964150:intron 15.0%
!! TTTAAATCTGAAAAGTTTAA+TGG - chr6_3:90480653-90480672 Msa0964150:intron 15.0%
!! AAATTTCATTAATATGATTG+TGG + chr6_3:90481718-90481737 None:intergenic 15.0%
!!! TCTTATGATTATTTTGATTA+GGG + chr6_3:90483107-90483126 None:intergenic 15.0%
!!! ATCTTATGATTATTTTGATT+AGG + chr6_3:90483108-90483127 None:intergenic 15.0%
!!! TATAATAACCATTCTTTTTA+TGG + chr6_3:90483722-90483741 None:intergenic 15.0%
!! AGCAAACAAAAAAAAATAAA+GGG + chr6_3:90484636-90484655 None:intergenic 15.0%
!! AAGCAAACAAAAAAAAATAA+AGG + chr6_3:90484637-90484656 None:intergenic 15.0%
!!! TTTAACACTGTTATTTTTAT+TGG - chr6_3:90485213-90485232 Msa0964150:intron 15.0%
!!! AAGTTCAAATATTTTGTAAT+TGG - chr6_3:90485248-90485267 Msa0964150:intron 15.0%
!!! AGTTCAAATATTTTGTAATT+GGG - chr6_3:90485249-90485268 Msa0964150:intron 15.0%
!! ACAATCCTCATAAAATTAAA+TGG - chr6_3:90477507-90477526 Msa0964150:three_prime_UTR 20.0%
!!! AAGTTCCATTTAATTTTATG+AGG + chr6_3:90477515-90477534 None:intergenic 20.0%
!! TAGTTATTCCTAATAAATAG+GGG + chr6_3:90477954-90477973 None:intergenic 20.0%
!! GTTAGTTATTCCTAATAAAT+AGG + chr6_3:90477956-90477975 None:intergenic 20.0%
!! AATAACTAACACTATTGAAT+TGG - chr6_3:90477966-90477985 Msa0964150:intron 20.0%
!! TATATTTACAACATCAAACT+TGG + chr6_3:90478020-90478039 None:intergenic 20.0%
!! TATATGAAAAGAGTTATTGT+GGG + chr6_3:90478841-90478860 None:intergenic 20.0%
!!! ACAATAACTCTTTTCATATA+GGG - chr6_3:90478841-90478860 Msa0964150:intron 20.0%
!!! AAATTGATATAATTTGGTGT+GGG + chr6_3:90479214-90479233 None:intergenic 20.0%
!!! AAAATTGATATAATTTGGTG+TGG + chr6_3:90479215-90479234 None:intergenic 20.0%
!! AATAAGTAATTTATGTGTGT+TGG + chr6_3:90479365-90479384 None:intergenic 20.0%
!!! CAGTTTTTAAAAAATTACAG+TGG - chr6_3:90479554-90479573 Msa0964150:intron 20.0%
!! TAGACATTGTAATTGAAAAA+TGG + chr6_3:90480565-90480584 None:intergenic 20.0%
!!! ATTTTTCAATTACAATGTCT+AGG - chr6_3:90480564-90480583 Msa0964150:intron 20.0%
!! TGTTATATAACTTGATTGTT+AGG - chr6_3:90480615-90480634 Msa0964150:intron 20.0%
!!! ATTTAGTATTTTGAAAATGG+TGG + chr6_3:90481324-90481343 None:intergenic 20.0%
!!! GAGATTTAGTATTTTGAAAA+TGG + chr6_3:90481327-90481346 None:intergenic 20.0%
!!! ATCTTAAGACATGAAATTTT+TGG + chr6_3:90481356-90481375 None:intergenic 20.0%
!! AATTTCATGTCTTAAGATAA+TGG - chr6_3:90481358-90481377 Msa0964150:intron 20.0%
!! TTAACTTACTAAGTAATGAA+TGG + chr6_3:90481400-90481419 None:intergenic 20.0%
!! TAGTTGATTATCATAATTGA+TGG + chr6_3:90482352-90482371 None:intergenic 20.0%
!!! TCAGAACATTTTATTTAGTT+TGG + chr6_3:90482563-90482582 None:intergenic 20.0%
!!! GTAATATTTTTAGTGCTATT+TGG + chr6_3:90482637-90482656 None:intergenic 20.0%
!! TATTCCAAATCATATGTATT+TGG + chr6_3:90482663-90482682 None:intergenic 20.0%
!!! TATTTTGGGATAAAATAGTT+GGG + chr6_3:90482807-90482826 None:intergenic 20.0%
!!! TTATTTTGGGATAAAATAGT+TGG + chr6_3:90482808-90482827 None:intergenic 20.0%
!!! AACTATTTTATCCCAAAATA+AGG - chr6_3:90482807-90482826 Msa0964150:intron 20.0%
!!! ACTATTTTATCCCAAAATAA+GGG - chr6_3:90482808-90482827 Msa0964150:intron 20.0%
!!! TTTTATTGCTATTATTCCTA+AGG + chr6_3:90483375-90483394 None:intergenic 20.0%
!!! TGGTTTTATTGAACATTTTT+GGG + chr6_3:90483471-90483490 None:intergenic 20.0%
!!! TTGGTTTTATTGAACATTTT+TGG + chr6_3:90483472-90483491 None:intergenic 20.0%
!! CGGTTTCTATTTATATAAAA+GGG + chr6_3:90484111-90484130 None:intergenic 20.0%
!! ACGGTTTCTATTTATATAAA+AGG + chr6_3:90484112-90484131 None:intergenic 20.0%
!! TTAAAAAATATTATCCACAG+TGG - chr6_3:90484332-90484351 Msa0964150:intron 20.0%
!! TAAAAAATATTATCCACAGT+GGG - chr6_3:90484333-90484352 Msa0964150:intron 20.0%
!! TTTATCTGTTGGATAATAAA+GGG + chr6_3:90484563-90484582 None:intergenic 20.0%
!! ATTTATCTGTTGGATAATAA+AGG + chr6_3:90484564-90484583 None:intergenic 20.0%
!! GCAAACAAAAAAAAATAAAG+GGG + chr6_3:90484635-90484654 None:intergenic 20.0%
!! ACAAAATATTTGAACTTAGA+AGG + chr6_3:90485245-90485264 None:intergenic 20.0%
!! TATCAAACTTTAATAAATGC+AGG - chr6_3:90485824-90485843 Msa0964150:intron 20.0%
!!! GTTAGTTTTATTTAGGTTTA+TGG - chr6_3:90485853-90485872 Msa0964150:CDS 20.0%
! CTATTGAATTGGATACTATA+AGG - chr6_3:90477977-90477996 Msa0964150:intron 25.0%
! TGAGAGAATAAAACGATAAT+TGG + chr6_3:90478048-90478067 None:intergenic 25.0%
! CAATATAAACAAATTTGGCA+AGG + chr6_3:90478090-90478109 None:intergenic 25.0%
!!! TGTTAAGTTGATTATGCTAA+CGG - chr6_3:90478680-90478699 Msa0964150:three_prime_UTR 25.0%
! CTATATGAAAAGAGTTATTG+TGG + chr6_3:90478842-90478861 None:intergenic 25.0%
!! CACAATAACTCTTTTCATAT+AGG - chr6_3:90478840-90478859 Msa0964150:intron 25.0%
!! ATAAGGGGTGATATTTATTT+TGG + chr6_3:90479061-90479080 None:intergenic 25.0%
!! ATTGATAACCAAATCATAAG+GGG + chr6_3:90479076-90479095 None:intergenic 25.0%
!! GATTGATAACCAAATCATAA+GGG + chr6_3:90479077-90479096 None:intergenic 25.0%
!! AGATTGATAACCAAATCATA+AGG + chr6_3:90479078-90479097 None:intergenic 25.0%
! TAATGAGGAGAAAATTGTTA+AGG - chr6_3:90479145-90479164 Msa0964150:intron 25.0%
! AATGAGGAGAAAATTGTTAA+GGG - chr6_3:90479146-90479165 Msa0964150:intron 25.0%
! GGGGAAAAATTGATATAATT+TGG + chr6_3:90479220-90479239 None:intergenic 25.0%
!! TTTTCCCCATAAAATTTCAA+TGG - chr6_3:90479232-90479251 Msa0964150:intron 25.0%
! TTTCCCCATAAAATTTCAAT+GGG - chr6_3:90479233-90479252 Msa0964150:intron 25.0%
!! AAAATGGATTTATCAGTTCA+AGG + chr6_3:90479517-90479536 None:intergenic 25.0%
! GATATCAAACATACACAAAA+TGG + chr6_3:90479533-90479552 None:intergenic 25.0%
! AATATTTGCAAGATTAAACG+TGG - chr6_3:90479712-90479731 Msa0964150:intron 25.0%
! AAAAAATATTGAGTGCATGT+TGG - chr6_3:90480066-90480085 Msa0964150:intron 25.0%
! TAAATGTAACTTAAGTACGA+GGG + chr6_3:90480137-90480156 None:intergenic 25.0%
! ATAAATGTAACTTAAGTACG+AGG + chr6_3:90480138-90480157 None:intergenic 25.0%
! TTAGTTAGCGTCTAAATTAT+AGG + chr6_3:90480344-90480363 None:intergenic 25.0%
! AATTGAAAAATGGCCTATAA+GGG + chr6_3:90480555-90480574 None:intergenic 25.0%
! TAATTGAAAAATGGCCTATA+AGG + chr6_3:90480556-90480575 None:intergenic 25.0%
! AAGTTATATAACAACAACTG+GGG + chr6_3:90480608-90480627 None:intergenic 25.0%
! CAAGTTATATAACAACAACT+GGG + chr6_3:90480609-90480628 None:intergenic 25.0%
! TCAAGTTATATAACAACAAC+TGG + chr6_3:90480610-90480629 None:intergenic 25.0%
! TCCAATATACAATTATTGGT+GGG + chr6_3:90480740-90480759 None:intergenic 25.0%
! ATCCAATATACAATTATTGG+TGG + chr6_3:90480741-90480760 None:intergenic 25.0%
! TGCATCCAATATACAATTAT+TGG + chr6_3:90480744-90480763 None:intergenic 25.0%
! ATATTGTTATGAGATACGAT+TGG + chr6_3:90480833-90480852 None:intergenic 25.0%
!! TGATTTAGAGTAAGAGAATA+AGG - chr6_3:90480905-90480924 Msa0964150:intron 25.0%
!! GATTTAGAGTAAGAGAATAA+GGG - chr6_3:90480906-90480925 Msa0964150:intron 25.0%
! TTGACATTTAGGCATTAATT+TGG + chr6_3:90480977-90480996 None:intergenic 25.0%
! ACTATAATTGCTTGACATTT+AGG + chr6_3:90480988-90481007 None:intergenic 25.0%
! ATACACTTGAATTAATGCTA+AGG - chr6_3:90481106-90481125 Msa0964150:intron 25.0%
!!! GTTGGTGATTTTCAAAATAA+TGG + chr6_3:90481295-90481314 None:intergenic 25.0%
! ACTTGTTCTAATGAATAGTT+GGG + chr6_3:90481465-90481484 None:intergenic 25.0%
! TAAAGAATCATAAAAGCAGA+CGG + chr6_3:90482130-90482149 None:intergenic 25.0%
!! ATCAAAAGGGTCTTATAATT+AGG - chr6_3:90482173-90482192 Msa0964150:intron 25.0%
!! AAATTAAGGTACTCTCTATT+TGG + chr6_3:90482403-90482422 None:intergenic 25.0%
!!! CAACGTAATTTTTAGCAATA+AGG + chr6_3:90482453-90482472 None:intergenic 25.0%
! TCTCTAGTATTTGGATAATT+TGG + chr6_3:90482487-90482506 None:intergenic 25.0%
! GATATATCTTACACATCATT+TGG + chr6_3:90482511-90482530 None:intergenic 25.0%
!!! AAATGTTCTGAAATACGAAA+AGG - chr6_3:90482572-90482591 Msa0964150:intron 25.0%
!!! AATGTTCTGAAATACGAAAA+GGG - chr6_3:90482573-90482592 Msa0964150:intron 25.0%
! CATTCCAAATACATATGATT+TGG - chr6_3:90482656-90482675 Msa0964150:intron 25.0%
! AAAATAGTTGGGTTAATGTT+AGG + chr6_3:90482796-90482815 None:intergenic 25.0%
!!! TTTTTTAAGGGATATTAGGT+TGG + chr6_3:90482881-90482900 None:intergenic 25.0%
!! ACATACAACAACATCAATTT+TGG + chr6_3:90483016-90483035 None:intergenic 25.0%
! TAGAGGCTTATATAAAATGT+TGG + chr6_3:90483307-90483326 None:intergenic 25.0%
!! TAACTGGATGGAATTAATTT+TGG + chr6_3:90483491-90483510 None:intergenic 25.0%
! AAATTAATTCCATCCAGTTA+TGG - chr6_3:90483491-90483510 Msa0964150:intron 25.0%
! AATTAATTCCATCCAGTTAT+GGG - chr6_3:90483492-90483511 Msa0964150:intron 25.0%
! GATTAAACCATTTAGTTAGA+AGG + chr6_3:90483558-90483577 None:intergenic 25.0%
! AAATTTAAATTATCCACCAC+AGG - chr6_3:90483611-90483630 Msa0964150:CDS 25.0%
! CTTAAAATGAGTAGCAAAAT+GGG - chr6_3:90483652-90483671 Msa0964150:intron 25.0%
!! CATGATACCATGAAATTTTT+CGG - chr6_3:90483765-90483784 Msa0964150:intron 25.0%
! ACAAATTCCGAAAAATTTCA+TGG + chr6_3:90483775-90483794 None:intergenic 25.0%
! TATAGAGTATAAATTAGTCG+TGG - chr6_3:90483858-90483877 Msa0964150:intron 25.0%
! ATAGAGTATAAATTAGTCGT+GGG - chr6_3:90483859-90483878 Msa0964150:intron 25.0%
! ATTTCTCTGATTTCAAAACA+CGG - chr6_3:90484001-90484020 Msa0964150:intron 25.0%
! TAAATTGATGTTCTACATTC+AGG + chr6_3:90484084-90484103 None:intergenic 25.0%
!! TATATTGATTAACTAGAGAG+AGG + chr6_3:90484237-90484256 None:intergenic 25.0%
! AAAAAATATTATCCACAGTG+GGG - chr6_3:90484334-90484353 Msa0964150:intron 25.0%
! ATTCCCATTATGTATAAGTA+GGG - chr6_3:90484416-90484435 Msa0964150:intron 25.0%
! TTACCCTACTTATACATAAT+GGG + chr6_3:90484422-90484441 None:intergenic 25.0%
! TTATCTGTTGGATAATAAAG+GGG + chr6_3:90484562-90484581 None:intergenic 25.0%
! ATGAAGGATCAAAGTTATTA+AGG + chr6_3:90484592-90484611 None:intergenic 25.0%
! TTAATAACTTTGATCCTTCA+TGG - chr6_3:90484591-90484610 Msa0964150:intron 25.0%
! ATGTTCATAATTTACCATGA+AGG + chr6_3:90484608-90484627 None:intergenic 25.0%
! TTATATACATCAGTTTGCAA+AGG - chr6_3:90484689-90484708 Msa0964150:intron 25.0%
!!! AAAGGAAAATCGCTTTTATA+TGG - chr6_3:90484707-90484726 Msa0964150:intron 25.0%
! CTAACTTTGAATCAATAGAA+GGG + chr6_3:90485034-90485053 None:intergenic 25.0%
! TTTGCATTGGAAAACATAAT+AGG + chr6_3:90485451-90485470 None:intergenic 25.0%
!!! GTACTACGTTAGTTTTATTT+AGG - chr6_3:90485846-90485865 Msa0964150:CDS 25.0%
! AGCTGGTCTAATTAGAAAAT+TGG - chr6_3:90477713-90477732 Msa0964150:intron 30.0%
!! ATCGTCTAATTTTGATCAAC+CGG - chr6_3:90477867-90477886 Msa0964150:intron 30.0%
ATTCCTAATAAATAGGGGAT+CGG + chr6_3:90477949-90477968 None:intergenic 30.0%
CAACATCAAACTTGGTAAAT+TGG + chr6_3:90478012-90478031 None:intergenic 30.0%
AGGTGACAAACAAAGAAAAT+GGG - chr6_3:90478481-90478500 Msa0964150:three_prime_UTR 30.0%
TATTGATGTGTTTCAAAAGC+TGG - chr6_3:90478566-90478585 Msa0964150:three_prime_UTR 30.0%
CAAATTCATAATCCACCATA+AGG + chr6_3:90478623-90478642 None:intergenic 30.0%
!! TATGGTGGATTATGAATTTG+TGG - chr6_3:90478623-90478642 Msa0964150:three_prime_UTR 30.0%
! GATTATGAATTTGTGGATTG+TGG - chr6_3:90478630-90478649 Msa0964150:three_prime_UTR 30.0%
!! GTTAAGTTGATTATGCTAAC+GGG - chr6_3:90478681-90478700 Msa0964150:three_prime_UTR 30.0%
GACTATTCGTTACACATTTA+GGG + chr6_3:90478722-90478741 None:intergenic 30.0%
TGACTATTCGTTACACATTT+AGG + chr6_3:90478723-90478742 None:intergenic 30.0%
AAATATCACCCCTTATGATT+TGG - chr6_3:90479065-90479084 Msa0964150:intron 30.0%
TTCCCCATAAAATTTCAATG+GGG - chr6_3:90479234-90479253 Msa0964150:intron 30.0%
! TACCCCCATTGAAATTTTAT+GGG + chr6_3:90479240-90479259 None:intergenic 30.0%
!! TGAATTTGCTAACTTTAGAG+CGG + chr6_3:90479335-90479354 None:intergenic 30.0%
!!! CAGGATCATTTCTAAGATTT+TGG - chr6_3:90480303-90480322 Msa0964150:intron 30.0%
!!! ACCCATTTTAATTCCCTTAT+AGG - chr6_3:90480539-90480558 Msa0964150:intron 30.0%
GCCTATAAGGGAATTAAAAT+GGG + chr6_3:90480543-90480562 None:intergenic 30.0%
CAATATACAATTATTGGTGG+GGG + chr6_3:90480738-90480757 None:intergenic 30.0%
CCAATATACAATTATTGGTG+GGG + chr6_3:90480739-90480758 None:intergenic 30.0%
CTCATGCATTAGAAAATTGA+TGG - chr6_3:90480881-90480900 Msa0964150:intron 30.0%
!! TTTGACTTGAATCAATGCTA+TGG - chr6_3:90481047-90481066 Msa0964150:intron 30.0%
GATCATAACCTTTGACAAAA+GGG + chr6_3:90481084-90481103 None:intergenic 30.0%
TGATCATAACCTTTGACAAA+AGG + chr6_3:90481085-90481104 None:intergenic 30.0%
! ATTAAGCACTCATTTTCCAA+AGG - chr6_3:90481132-90481151 Msa0964150:intron 30.0%
GTGTATATGATCATAACCTT+TGG + chr6_3:90481092-90481111 None:intergenic 30.0%
ATACACTTGAATCAATGCTA+AGG - chr6_3:90481165-90481184 Msa0964150:intron 30.0%
CATTAGAACATTTACCAAAG+AGG + chr6_3:90481202-90481221 None:intergenic 30.0%
!! TAGTATTTTGAAAATGGTGG+AGG + chr6_3:90481321-90481340 None:intergenic 30.0%
CACTTGTTCTAATGAATAGT+TGG + chr6_3:90481466-90481485 None:intergenic 30.0%
CACACTAATATCAAATGTCT+GGG + chr6_3:90481532-90481551 None:intergenic 30.0%
GAAAATATCTGTGTCATGTT+GGG + chr6_3:90481840-90481859 None:intergenic 30.0%
! TATTTTCCTTCTCACTAGTA+CGG - chr6_3:90481956-90481975 Msa0964150:intron 30.0%
! TTTTACCAAGGATATAAGGT+CGG + chr6_3:90482034-90482053 None:intergenic 30.0%
! TGACTTTTACCAAGGATATA+AGG + chr6_3:90482038-90482057 None:intergenic 30.0%
AAAGAATCATAAAAGCAGAC+GGG + chr6_3:90482129-90482148 None:intergenic 30.0%
!! CTCAACGTTTGTTATCAAAA+GGG - chr6_3:90482160-90482179 Msa0964150:intron 30.0%
TTTGGATAATTTGGAAAGAG+AGG + chr6_3:90482478-90482497 None:intergenic 30.0%
!! TCATTTGGTTCTCTAGTATT+TGG + chr6_3:90482496-90482515 None:intergenic 30.0%
! TAGCAGGCATTTCTAAATTT+TGG + chr6_3:90482535-90482554 None:intergenic 30.0%
!! ATTTAGTTTGGTCATTTAGC+AGG + chr6_3:90482551-90482570 None:intergenic 30.0%
! ACATTGACAATGTGGATTAA+TGG + chr6_3:90482709-90482728 None:intergenic 30.0%
TAATGTTAGGCTATTTGTGT+GGG + chr6_3:90482783-90482802 None:intergenic 30.0%
TTAATGTTAGGCTATTTGTG+TGG + chr6_3:90482784-90482803 None:intergenic 30.0%
!!! TTGTTTTAGTTGGTTACAGA+GGG + chr6_3:90482941-90482960 None:intergenic 30.0%
TGTAACCAACTAAAACAAGA+AGG - chr6_3:90482943-90482962 Msa0964150:intron 30.0%
GTAACCAACTAAAACAAGAA+GGG - chr6_3:90482944-90482963 Msa0964150:intron 30.0%
!! ACAACATCAATTTTGGTGAA+TGG + chr6_3:90483009-90483028 None:intergenic 30.0%
TTCTGACTATTTAGTGTAAG+TGG + chr6_3:90483053-90483072 None:intergenic 30.0%
ATCGAAAATCATTCAACCTT+TGG - chr6_3:90483340-90483359 Msa0964150:intron 30.0%
TCGAAAATCATTCAACCTTT+GGG - chr6_3:90483341-90483360 Msa0964150:intron 30.0%
TTGATCTCCTTCTAACTAAA+TGG - chr6_3:90483548-90483567 Msa0964150:CDS 30.0%
! CCATTTTGCTACTCATTTTA+AGG + chr6_3:90483654-90483673 None:intergenic 30.0%
CCTTAAAATGAGTAGCAAAA+TGG - chr6_3:90483651-90483670 Msa0964150:intron 30.0%
TAGAGTATAAATTAGTCGTG+GGG - chr6_3:90483860-90483879 Msa0964150:intron 30.0%
TTTCTCTGATTTCAAAACAC+GGG - chr6_3:90484002-90484021 Msa0964150:intron 30.0%
AGTGAAACGATTTAGTGTTA+CGG + chr6_3:90484131-90484150 None:intergenic 30.0%
CATTCCCATTATGTATAAGT+AGG - chr6_3:90484415-90484434 Msa0964150:intron 30.0%
GTTACCCTACTTATACATAA+TGG + chr6_3:90484423-90484442 None:intergenic 30.0%
AGTATATCGGAATAACGTAT+AGG - chr6_3:90484448-90484467 Msa0964150:intron 30.0%
GGAAAATTAGGCATGAAAAT+AGG + chr6_3:90484541-90484560 None:intergenic 30.0%
GGATAATAAAGGGGAAAATT+AGG + chr6_3:90484553-90484572 None:intergenic 30.0%
GCTAACTTTGAATCAATAGA+AGG + chr6_3:90485035-90485054 None:intergenic 30.0%
! TTGTTGTTACGTTATCAGTT+GGG + chr6_3:90485061-90485080 None:intergenic 30.0%
! ATTGTTGTTACGTTATCAGT+TGG + chr6_3:90485062-90485081 None:intergenic 30.0%
CAAGAGAAAAATGCAACAAT+AGG - chr6_3:90485097-90485116 Msa0964150:intron 30.0%
CACACACACATATATATATG+TGG - chr6_3:90485328-90485347 Msa0964150:intron 30.0%
TAAAAAGAGCAACTTTGCAT+TGG + chr6_3:90485464-90485483 None:intergenic 30.0%
! AATGCAAAGTTGCTCTTTTT+AGG - chr6_3:90485463-90485482 Msa0964150:intron 30.0%
ACTACGTGTGTGTATATATA+GGG + chr6_3:90485527-90485546 None:intergenic 30.0%
TACTACGTGTGTGTATATAT+AGG + chr6_3:90485528-90485547 None:intergenic 30.0%
ATATACACACACGTAGTAAA+TGG - chr6_3:90485530-90485549 Msa0964150:intron 30.0%
TACAACGAGTAAAAAAACTC+CGG - chr6_3:90485998-90486017 Msa0964150:CDS 30.0%
! TATCATTCTTTGCTCTAAAC+CGG + chr6_3:90486020-90486039 None:intergenic 30.0%
!! GCAGCTTTTTCTATTGGATA+AGG - chr6_3:90477412-90477431 Msa0964150:three_prime_UTR 35.0%
AAATGGAACTTGAACACATC+TGG - chr6_3:90477524-90477543 Msa0964150:three_prime_UTR 35.0%
ATGGGAACAAATCATTGTCA+TGG - chr6_3:90477567-90477586 Msa0964150:intron 35.0%
TCTATTGTGCTTAAATCAGC+TGG - chr6_3:90477696-90477715 Msa0964150:intron 35.0%
TGAGCAATCAACAATGACAA+TGG - chr6_3:90477916-90477935 Msa0964150:intron 35.0%
GAGCAATCAACAATGACAAT+GGG - chr6_3:90477917-90477936 Msa0964150:intron 35.0%
TTCCTAATAAATAGGGGATC+GGG + chr6_3:90477948-90477967 None:intergenic 35.0%
TGAGCTAAAACAAGACAAGA+GGG - chr6_3:90478208-90478227 Msa0964150:intron 35.0%
!! ATTAGTCATGTACTGATTGC+TGG - chr6_3:90478450-90478469 Msa0964150:intron 35.0%
CAGGTGACAAACAAAGAAAA+TGG - chr6_3:90478480-90478499 Msa0964150:three_prime_UTR 35.0%
ATTGTTGATACATGCACCAA+CGG - chr6_3:90478528-90478547 Msa0964150:three_prime_UTR 35.0%
GAATGCTCAAAGTTACCTTA+TGG - chr6_3:90478605-90478624 Msa0964150:three_prime_UTR 35.0%
TTCCTGATTGTGCACTTTAT+TGG - chr6_3:90478778-90478797 Msa0964150:intron 35.0%
TCCCCATAAAATTTCAATGG+GGG - chr6_3:90479235-90479254 Msa0964150:intron 35.0%
! ACCCCCATTGAAATTTTATG+GGG + chr6_3:90479239-90479258 None:intergenic 35.0%
! CTACCCCCATTGAAATTTTA+TGG + chr6_3:90479241-90479260 None:intergenic 35.0%
CATAAAATTTCAATGGGGGT+AGG - chr6_3:90479239-90479258 Msa0964150:intron 35.0%
GTATGCAAACAAATCCAATC+CGG + chr6_3:90479275-90479294 None:intergenic 35.0%
!! GAATTTGCTAACTTTAGAGC+GGG + chr6_3:90479334-90479353 None:intergenic 35.0%
AAAGTTAGCAAATTCAGACC+CGG - chr6_3:90479339-90479358 Msa0964150:intron 35.0%
! AGTAATTTATGTGTGTTGGC+CGG + chr6_3:90479361-90479380 None:intergenic 35.0%
AATGCACACAAGATCCTTTA+AGG - chr6_3:90479457-90479476 Msa0964150:intron 35.0%
AAAAAATTACAGTGGGTCAC+CGG - chr6_3:90479562-90479581 Msa0964150:intron 35.0%
ATGTATCGTCAAAAAGCGAA+AGG - chr6_3:90479902-90479921 Msa0964150:intron 35.0%
AACTTCAGATTCACAAAGAC+TGG - chr6_3:90480184-90480203 Msa0964150:intron 35.0%
AATTTGAATTCTTAGCCCTG+CGG - chr6_3:90480274-90480293 Msa0964150:intron 35.0%
!! TCTAAGATTTTGGTAGCTGA+AGG - chr6_3:90480313-90480332 Msa0964150:intron 35.0%
!! CTAAGATTTTGGTAGCTGAA+GGG - chr6_3:90480314-90480333 Msa0964150:intron 35.0%
GGCCTATAAGGGAATTAAAA+TGG + chr6_3:90480544-90480563 None:intergenic 35.0%
ATGTAAAACTCAAAGCGCAT+GGG - chr6_3:90480682-90480701 Msa0964150:intron 35.0%
CCCCACCAATAATTGTATAT+TGG - chr6_3:90480736-90480755 Msa0964150:intron 35.0%
GAACTCATAGTATCATGAAG+GGG + chr6_3:90480786-90480805 None:intergenic 35.0%
GGAACTCATAGTATCATGAA+GGG + chr6_3:90480787-90480806 None:intergenic 35.0%
AGGAACTCATAGTATCATGA+AGG + chr6_3:90480788-90480807 None:intergenic 35.0%
! AGTGTTTTCTCTCATGTGAA+GGG + chr6_3:90481022-90481041 None:intergenic 35.0%
! ATTAAGCACCCTTTTGTCAA+AGG - chr6_3:90481073-90481092 Msa0964150:intron 35.0%
CAAGAGTTGTAACTCTTCAT+GGG + chr6_3:90481238-90481257 None:intergenic 35.0%
! TGGTGAAGAGTTACAACTTT+TGG - chr6_3:90481256-90481275 Msa0964150:intron 35.0%
TTGCTCATTCCCAAATAGTA+TGG - chr6_3:90481424-90481443 Msa0964150:intron 35.0%
TCATTCCCAAATAGTATGGT+AGG - chr6_3:90481428-90481447 Msa0964150:intron 35.0%
GCTTTCCTACCATACTATTT+GGG + chr6_3:90481436-90481455 None:intergenic 35.0%
AGCTTTCCTACCATACTATT+TGG + chr6_3:90481437-90481456 None:intergenic 35.0%
! ATAAAATCTCAGTGTCGTTC+AGG - chr6_3:90481500-90481519 Msa0964150:intron 35.0%
! TAAAATCTCAGTGTCGTTCA+GGG - chr6_3:90481501-90481520 Msa0964150:intron 35.0%
CCACACTAATATCAAATGTC+TGG + chr6_3:90481533-90481552 None:intergenic 35.0%
CCAGACATTTGATATTAGTG+TGG - chr6_3:90481530-90481549 Msa0964150:intron 35.0%
TAGTGTGGCGAAAATAAACT+AGG - chr6_3:90481545-90481564 Msa0964150:intron 35.0%
! ATTGGTTTAGGCAAGATCAT+TGG - chr6_3:90481632-90481651 Msa0964150:intron 35.0%
! TTAGGCAAGATCATTGGTTA+TGG - chr6_3:90481638-90481657 Msa0964150:intron 35.0%
TATGATTGTGGAGTCACAAT+GGG + chr6_3:90481706-90481725 None:intergenic 35.0%
ATATGATTGTGGAGTCACAA+TGG + chr6_3:90481707-90481726 None:intergenic 35.0%
GGAAAATATCTGTGTCATGT+TGG + chr6_3:90481841-90481860 None:intergenic 35.0%
TTTACCAAGGATATAAGGTC+GGG + chr6_3:90482033-90482052 None:intergenic 35.0%
TCCTTGGTAAAAGTCAGTAA+AGG - chr6_3:90482042-90482061 Msa0964150:intron 35.0%
!!! TCCTTTACTGACTTTTACCA+AGG + chr6_3:90482046-90482065 None:intergenic 35.0%
!! GCTCAACGTTTGTTATCAAA+AGG - chr6_3:90482159-90482178 Msa0964150:intron 35.0%
! GGTCTTATAATTAGGAACAG+AGG - chr6_3:90482181-90482200 Msa0964150:intron 35.0%
! TTAAGGTACTCTCTATTTGG+TGG + chr6_3:90482400-90482419 None:intergenic 35.0%
GCATCTCTTGGACAAAATTA+AGG + chr6_3:90482417-90482436 None:intergenic 35.0%
AGAATCAATTCAGCATCTCT+TGG + chr6_3:90482429-90482448 None:intergenic 35.0%
ACCTTGTTCAACATTGGATT+GGG + chr6_3:90482613-90482632 None:intergenic 35.0%
TACCTTGTTCAACATTGGAT+TGG + chr6_3:90482614-90482633 None:intergenic 35.0%
TTTGGTACCTTGTTCAACAT+TGG + chr6_3:90482619-90482638 None:intergenic 35.0%
GGAATAGCAACAAGATCAAA+CGG - chr6_3:90482677-90482696 Msa0964150:intron 35.0%
! ACAATGTGGATTAATGGCAA+CGG + chr6_3:90482703-90482722 None:intergenic 35.0%
TACTTTGCACATTGACAATG+TGG + chr6_3:90482717-90482736 None:intergenic 35.0%
!!! GCAGAAGATACCCTTATTTT+GGG + chr6_3:90482821-90482840 None:intergenic 35.0%
!! TGCAGAAGATACCCTTATTT+TGG + chr6_3:90482822-90482841 None:intergenic 35.0%
TTATAGACGAGAGATACTAG+AGG - chr6_3:90482844-90482863 Msa0964150:intron 35.0%
!! TTAAGGGATATTAGGTTGGT+TGG + chr6_3:90482877-90482896 None:intergenic 35.0%
!!! CTTGTTTTAGTTGGTTACAG+AGG + chr6_3:90482942-90482961 None:intergenic 35.0%
!!! TTCTCCCTTCTTGTTTTAGT+TGG + chr6_3:90482951-90482970 None:intergenic 35.0%
CGAGGAATTTATGGTTGAAA+GGG + chr6_3:90482977-90482996 None:intergenic 35.0%
TAGTCATAGCGAGGAATTTA+TGG + chr6_3:90482986-90483005 None:intergenic 35.0%
GGGTATTTAGATGTTGCTAT+GGG + chr6_3:90483087-90483106 None:intergenic 35.0%
! AGGGTATTTAGATGTTGCTA+TGG + chr6_3:90483088-90483107 None:intergenic 35.0%
! TAACCAACTCATTTGCTACA+AGG - chr6_3:90483184-90483203 Msa0964150:intron 35.0%
AGACAACATTTGTGAAAGGT+AGG + chr6_3:90483227-90483246 None:intergenic 35.0%
TCTCAGACAACATTTGTGAA+AGG + chr6_3:90483231-90483250 None:intergenic 35.0%
! CGATCAATTTCGTTTGTTAG+AGG + chr6_3:90483324-90483343 None:intergenic 35.0%
CGAAAATCATTCAACCTTTG+GGG - chr6_3:90483342-90483361 Msa0964150:intron 35.0%
GAAAATCATTCAACCTTTGG+GGG - chr6_3:90483343-90483362 Msa0964150:intron 35.0%
ATTCCATCGTAAGAGTAAGT+TGG + chr6_3:90483417-90483436 None:intergenic 35.0%
TATAAAAGCCCATAACTGGA+TGG + chr6_3:90483503-90483522 None:intergenic 35.0%
CAGTTATAAAAGCCCATAAC+TGG + chr6_3:90483507-90483526 None:intergenic 35.0%
TAGTTAGAAGGAGATCAAAC+TGG + chr6_3:90483546-90483565 None:intergenic 35.0%
TTGTACTTTGAACCAGCATA+AGG + chr6_3:90483591-90483610 None:intergenic 35.0%
! CGCAACAATCTAGAATGAAT+TGG + chr6_3:90483813-90483832 None:intergenic 35.0%
! GTTGTTGTTAGAAGCTAAGT+TGG + chr6_3:90483899-90483918 None:intergenic 35.0%
TAGCTTCTAACAACAACACA+TGG - chr6_3:90483902-90483921 Msa0964150:intron 35.0%
TCTACATTCAGGACATGTTT+GGG + chr6_3:90484073-90484092 None:intergenic 35.0%
TTCTACATTCAGGACATGTT+TGG + chr6_3:90484074-90484093 None:intergenic 35.0%
AAAGAGATGATGTTGATCGA+TGG + chr6_3:90484261-90484280 None:intergenic 35.0%
AGGGTAACGTGTAAGTATAT+CGG - chr6_3:90484435-90484454 Msa0964150:intron 35.0%
ATCGGAATAACGTATAGGAA+CGG - chr6_3:90484453-90484472 Msa0964150:intron 35.0%
ACGAGGTGGAATGAAAATTA+GGG + chr6_3:90484518-90484537 None:intergenic 35.0%
TTATAAGCAAAAGCGATCCT+AGG + chr6_3:90485152-90485171 None:intergenic 35.0%
! CAGTGTTAAAACAAGAGCAT+TGG + chr6_3:90485203-90485222 None:intergenic 35.0%
TTGCTTAACATATGCCCTAA+AGG - chr6_3:90485486-90485505 Msa0964150:intron 35.0%
!! CATGTTAACTTGTGCCTTTA+GGG + chr6_3:90485503-90485522 None:intergenic 35.0%
!! TCATGTTAACTTGTGCCTTT+AGG + chr6_3:90485504-90485523 None:intergenic 35.0%
! AGTTCTCCTTTTGTAACAAC+AGG - chr6_3:90485904-90485923 Msa0964150:CDS 35.0%
CCAAATCCTGTTGTTACAAA+AGG + chr6_3:90485913-90485932 None:intergenic 35.0%
! CCTTTTGTAACAACAGGATT+TGG - chr6_3:90485910-90485929 Msa0964150:CDS 35.0%
TGCAACAATTGTAGCATTGT+TGG - chr6_3:90485936-90485955 Msa0964150:CDS 35.0%
!! GTCGAAGCAGCTTTTTCTAT+TGG - chr6_3:90477406-90477425 Msa0964150:three_prime_UTR 40.0%
TCAAAGAGCTAACAACGTGA+AGG - chr6_3:90477469-90477488 Msa0964150:three_prime_UTR 40.0%
TTGTCATGGCGTAGTGAATT+TGG - chr6_3:90477581-90477600 Msa0964150:intron 40.0%
ATCCCGATCCCCTATTTATT+AGG - chr6_3:90477943-90477962 Msa0964150:intron 40.0%
GTGAGCTAAAACAAGACAAG+AGG - chr6_3:90478207-90478226 Msa0964150:intron 40.0%
TTTCAAAAGCTGGATAGCTC+TGG - chr6_3:90478576-90478595 Msa0964150:three_prime_UTR 40.0%
TTCAAAAGCTGGATAGCTCT+GGG - chr6_3:90478577-90478596 Msa0964150:three_prime_UTR 40.0%
AAGGTAACTTTGAGCATTCC+CGG + chr6_3:90478604-90478623 None:intergenic 40.0%
TGCTCAAAGTTACCTTATGG+TGG - chr6_3:90478608-90478627 Msa0964150:three_prime_UTR 40.0%
GACCAATAAAGTGCACAATC+AGG + chr6_3:90478783-90478802 None:intergenic 40.0%
AATTTCAATGGGGGTAGGTT+CGG - chr6_3:90479244-90479263 Msa0964150:intron 40.0%
! GTAATTTATGTGTGTTGGCC+GGG + chr6_3:90479360-90479379 None:intergenic 40.0%
ATTACATGCTCCTGCCTTAA+AGG + chr6_3:90479474-90479493 None:intergenic 40.0%
! TGCAATCTGCTTGCCAATTT+TGG + chr6_3:90479825-90479844 None:intergenic 40.0%
CAAGCAGATTGCAACACAAA+AGG - chr6_3:90479832-90479851 Msa0964150:intron 40.0%
CAGATTGCAACACAAAAGGT+GGG - chr6_3:90479836-90479855 Msa0964150:intron 40.0%
AACACAAAAGGTGGGAATTG+TGG - chr6_3:90479844-90479863 Msa0964150:intron 40.0%
!! ATTCACAAAGACTGGTCTCA+AGG - chr6_3:90480192-90480211 Msa0964150:intron 40.0%
AATCAATTGCATCCTCACGA+TGG - chr6_3:90480245-90480264 Msa0964150:intron 40.0%
CATGTAAAACTCAAAGCGCA+TGG - chr6_3:90480681-90480700 Msa0964150:intron 40.0%
ATCGAACCTAAAGGTTAGTG+TGG + chr6_3:90480712-90480731 None:intergenic 40.0%
TGGTTGTGCAATACACATCA+AGG + chr6_3:90480808-90480827 None:intergenic 40.0%
GTTATGAGATACGATTGGTG+TGG + chr6_3:90480828-90480847 None:intergenic 40.0%
! GAGTGTTTTCTCTCATGTGA+AGG + chr6_3:90481023-90481042 None:intergenic 40.0%
AGGTTCATTAAGCACCTCTT+TGG - chr6_3:90481185-90481204 Msa0964150:intron 40.0%
CCAAGAGTTGTAACTCTTCA+TGG + chr6_3:90481239-90481258 None:intergenic 40.0%
CCATGAAGAGTTACAACTCT+TGG - chr6_3:90481236-90481255 Msa0964150:intron 40.0%
! TGAAAATGGTGGAGGATTGT+TGG + chr6_3:90481313-90481332 None:intergenic 40.0%
!! TGAGAAGTGCTTCAGCATAT+TGG - chr6_3:90481614-90481633 Msa0964150:intron 40.0%
!! GTGCTTCAGCATATTGGTTT+AGG - chr6_3:90481620-90481639 Msa0964150:intron 40.0%
! AGATCATTGGTTATGGTTGC+TGG - chr6_3:90481645-90481664 Msa0964150:intron 40.0%
!! TGGTTGCTGGTTCATTTGAA+TGG - chr6_3:90481658-90481677 Msa0964150:intron 40.0%
TGGTTCATTTGAATGGTTGC+TGG - chr6_3:90481665-90481684 Msa0964150:intron 40.0%
CAGACAAATCAAACGAAGCA+TGG + chr6_3:90481862-90481881 None:intergenic 40.0%
GAAGGAAAATACTGCAGACA+TGG + chr6_3:90481947-90481966 None:intergenic 40.0%
! TAGTACGGAGCATTTGGTTT+GGG - chr6_3:90481971-90481990 Msa0964150:intron 40.0%
! GTTTGGGTTATCAACATTCG+AGG - chr6_3:90481987-90482006 Msa0964150:intron 40.0%
TCCCAATCCAATGTTGAACA+AGG - chr6_3:90482609-90482628 Msa0964150:intron 40.0%
GCGAGGAATTTATGGTTGAA+AGG + chr6_3:90482978-90482997 None:intergenic 40.0%
GATCCTTGTAGCAAATGAGT+TGG + chr6_3:90483190-90483209 None:intergenic 40.0%
AAGGTAGGCAGATTCTTGAT+GGG + chr6_3:90483212-90483231 None:intergenic 40.0%
AAAGGTAGGCAGATTCTTGA+TGG + chr6_3:90483213-90483232 None:intergenic 40.0%
! TTTTATGGTGCCCAAGTAGA+GGG + chr6_3:90483707-90483726 None:intergenic 40.0%
! TTTTTATGGTGCCCAAGTAG+AGG + chr6_3:90483708-90483727 None:intergenic 40.0%
CTTGGGCACCATAAAAAGAA+TGG - chr6_3:90483711-90483730 Msa0964150:intron 40.0%
! AGAATGAATTGGCTTCGTGA+AGG + chr6_3:90483802-90483821 None:intergenic 40.0%
! GTTGTTAGAAGCTAAGTTGG+AGG + chr6_3:90483896-90483915 None:intergenic 40.0%
TAGGGAAAACCGGTCAAATT+GGG + chr6_3:90483964-90483983 None:intergenic 40.0%
CCAGTAAAAGTAGGGAAAAC+CGG + chr6_3:90483974-90483993 None:intergenic 40.0%
!! CGGTTTTCCCTACTTTTACT+GGG - chr6_3:90483972-90483991 Msa0964150:intron 40.0%
!! TTCCCTACTTTTACTGGGTT+TGG - chr6_3:90483977-90483996 Msa0964150:intron 40.0%
!! TCCCTACTTTTACTGGGTTT+GGG - chr6_3:90483978-90483997 Msa0964150:intron 40.0%
TCCCAAACCCAGTAAAAGTA+GGG + chr6_3:90483982-90484001 None:intergenic 40.0%
ATCCCAAACCCAGTAAAAGT+AGG + chr6_3:90483983-90484002 None:intergenic 40.0%
TCTGATTTCAAAACACGGGT+AGG - chr6_3:90484006-90484025 Msa0964150:intron 40.0%
CTGATTTCAAAACACGGGTA+GGG - chr6_3:90484007-90484026 Msa0964150:intron 40.0%
TGATTTCAAAACACGGGTAG+GGG - chr6_3:90484008-90484027 Msa0964150:intron 40.0%
TTCAGGACATGTTTGGGTAT+GGG + chr6_3:90484067-90484086 None:intergenic 40.0%
ATTCAGGACATGTTTGGGTA+TGG + chr6_3:90484068-90484087 None:intergenic 40.0%
!! ATGACAAGCGAGTGTCATTT+GGG + chr6_3:90484176-90484195 None:intergenic 40.0%
! AATGACAAGCGAGTGTCATT+TGG + chr6_3:90484177-90484196 None:intergenic 40.0%
TCGGAATAACGTATAGGAAC+GGG - chr6_3:90484454-90484473 Msa0964150:intron 40.0%
ATTAGGGCGTGTTGGAAATA+GGG + chr6_3:90484502-90484521 None:intergenic 40.0%
AATTAGGGCGTGTTGGAAAT+AGG + chr6_3:90484503-90484522 None:intergenic 40.0%
GAATGAAAATTAGGGCGTGT+TGG + chr6_3:90484510-90484529 None:intergenic 40.0%
GACGAGGTGGAATGAAAATT+AGG + chr6_3:90484519-90484538 None:intergenic 40.0%
TTAGGCATGAAAATAGGACG+AGG + chr6_3:90484535-90484554 None:intergenic 40.0%
! TAAGGAGCGCATTTATCTGT+TGG + chr6_3:90484574-90484593 None:intergenic 40.0%
ACTTTAGATCTAGTCAGTGG+CGG + chr6_3:90484998-90485017 None:intergenic 40.0%
CCAACTTTAGATCTAGTCAG+TGG + chr6_3:90485001-90485020 None:intergenic 40.0%
! CCACTGACTAGATCTAAAGT+TGG - chr6_3:90484998-90485017 Msa0964150:intron 40.0%
TCCTTAATATGTGCCCTTGA+GGG + chr6_3:90485372-90485391 None:intergenic 40.0%
TTCCTTAATATGTGCCCTTG+AGG + chr6_3:90485373-90485392 None:intergenic 40.0%
TGTAACTGAGCTATTGTCAG+TGG + chr6_3:90485573-90485592 None:intergenic 40.0%
! ACTCTTCTTGCTCTAAATGC+AGG - chr6_3:90485738-90485757 Msa0964150:intron 40.0%
TGGAAAAGAGCAGTCGTTAT+AGG - chr6_3:90485774-90485793 Msa0964150:intron 40.0%
TTGATACATGCACCAACGGA+GGG - chr6_3:90478532-90478551 Msa0964150:three_prime_UTR 45.0%
! GCTAACGGGTAATAGTCAGT+TGG - chr6_3:90478695-90478714 Msa0964150:three_prime_UTR 45.0%
!! CACACAAGATCCTTTAAGGC+AGG - chr6_3:90479461-90479480 Msa0964150:intron 45.0%
TCAACTTCTTCCCTCTGATC+CGG + chr6_3:90479584-90479603 None:intergenic 45.0%
GCAGATTGCAACACAAAAGG+TGG - chr6_3:90479835-90479854 Msa0964150:intron 45.0%
! ACCAACTGCTCGAGGTTTTT+GGG + chr6_3:90479944-90479963 None:intergenic 45.0%
! TACCAACTGCTCGAGGTTTT+TGG + chr6_3:90479945-90479964 None:intergenic 45.0%
GTAGTAATACCAACTGCTCG+AGG + chr6_3:90479952-90479971 None:intergenic 45.0%
!! TGTTGGCTCGTGAAACTATC+AGG - chr6_3:90480083-90480102 Msa0964150:intron 45.0%
GGATTGCCACACTAACCTTT+AGG - chr6_3:90480703-90480722 Msa0964150:intron 45.0%
GTATCATGAAGGGGATTCGA+TGG + chr6_3:90480777-90480796 None:intergenic 45.0%
! TAGCAGTTGATGTGGAAGGA+AGG + chr6_3:90481803-90481822 None:intergenic 45.0%
TTCCTTCCACATCAACTGCT+AGG - chr6_3:90481802-90481821 Msa0964150:intron 45.0%
! TTCATGCCTAGCAGTTGATG+TGG + chr6_3:90481811-90481830 None:intergenic 45.0%
AATGCTCCGTACTAGTGAGA+AGG + chr6_3:90481965-90481984 None:intergenic 45.0%
! TCTCACTAGTACGGAGCATT+TGG - chr6_3:90481965-90481984 Msa0964150:intron 45.0%
! CTAGTACGGAGCATTTGGTT+TGG - chr6_3:90481970-90481989 Msa0964150:intron 45.0%
TGTACCCGACCTTATATCCT+TGG - chr6_3:90482026-90482045 Msa0964150:intron 45.0%
GCAATGGTGTGAAGGAGTTA+GGG + chr6_3:90482080-90482099 None:intergenic 45.0%
AGCAATGGTGTGAAGGAGTT+AGG + chr6_3:90482081-90482100 None:intergenic 45.0%
TAACTCCTTCACACCATTGC+TGG - chr6_3:90482080-90482099 Msa0964150:intron 45.0%
! ACTCTCTATTTGGTGGCTGA+AGG + chr6_3:90482393-90482412 None:intergenic 45.0%
GAAATACGAAAAGGGTCGAC+TGG - chr6_3:90482581-90482600 Msa0964150:intron 45.0%
ATTTGTGTGGGAGGAAGAGT+TGG + chr6_3:90482771-90482790 None:intergenic 45.0%
TGTTAGGCTATTTGTGTGGG+AGG + chr6_3:90482780-90482799 None:intergenic 45.0%
! CGTAAGAGTAAGTTGGCGAA+AGG + chr6_3:90483410-90483429 None:intergenic 45.0%
TCGCCAACTTACTCTTACGA+TGG - chr6_3:90483411-90483430 Msa0964150:intron 45.0%
GGAGATCAAACTGGAAGTCT+GGG + chr6_3:90483537-90483556 None:intergenic 45.0%
AGGAGATCAAACTGGAAGTC+TGG + chr6_3:90483538-90483557 None:intergenic 45.0%
TCAAATCCACGACCTTATGC+TGG - chr6_3:90483576-90483595 Msa0964150:CDS 45.0%
TTTGAACCAGCATAAGGTCG+TGG + chr6_3:90483585-90483604 None:intergenic 45.0%
TTAAGGCATGTGAGATCGAC+AGG + chr6_3:90483637-90483656 None:intergenic 45.0%
ATTATCCACCCCCTCTACTT+GGG - chr6_3:90483694-90483713 Msa0964150:intron 45.0%
TTTATGGTGCCCAAGTAGAG+GGG + chr6_3:90483706-90483725 None:intergenic 45.0%
GTAGGGAAAACCGGTCAAAT+TGG + chr6_3:90483965-90483984 None:intergenic 45.0%
!! CCGGTTTTCCCTACTTTTAC+TGG - chr6_3:90483971-90483990 Msa0964150:intron 45.0%
!! GGGATAGGTAATGGGGATAT+AGG - chr6_3:90484028-90484047 Msa0964150:intron 45.0%
! TCGAGAGTGTGAGATATGGA+AGG + chr6_3:90484214-90484233 None:intergenic 45.0%
TATTATCCACAGTGGGGATG+AGG - chr6_3:90484340-90484359 Msa0964150:intron 45.0%
CGGAATAACGTATAGGAACG+GGG - chr6_3:90484455-90484474 Msa0964150:intron 45.0%
TTTAGATCTAGTCAGTGGCG+GGG + chr6_3:90484996-90485015 None:intergenic 45.0%
CTTTAGATCTAGTCAGTGGC+GGG + chr6_3:90484997-90485016 None:intergenic 45.0%
AATGCTACATTTCGCGACCT+AGG - chr6_3:90485132-90485151 Msa0964150:intron 45.0%
!! TGTGTTAACTTGTGCCCTCA+AGG - chr6_3:90485355-90485374 Msa0964150:intron 45.0%
!! GTGTTAACTTGTGCCCTCAA+GGG - chr6_3:90485356-90485375 Msa0964150:intron 45.0%
ATGCAGGTCGTGACTCTTAT+TGG - chr6_3:90485754-90485773 Msa0964150:intron 45.0%
!!! GTATTATTTTTTTTTTTTTA+AGG + chr6_3:90477830-90477849 None:intergenic 5.0%
!!! TTAATATTTATTTTATTCTT+AGG - chr6_3:90478122-90478141 Msa0964150:intron 5.0%
TGTTCTGTGCAGCTCAGGAT+GGG - chr6_3:90477549-90477568 Msa0964150:intron 50.0%
CATGGCGTAGTGAATTTGGC+TGG - chr6_3:90477585-90477604 Msa0964150:intron 50.0%
TTTGCCAACAGGTCCACAGA+AGG + chr6_3:90477615-90477634 None:intergenic 50.0%
TTCTGTGGACCTGTTGGCAA+AGG - chr6_3:90477614-90477633 Msa0964150:intron 50.0%
CCACAAACACCTTTGCCAAC+AGG + chr6_3:90477626-90477645 None:intergenic 50.0%
!! CCTGTTGGCAAAGGTGTTTG+TGG - chr6_3:90477623-90477642 Msa0964150:intron 50.0%
GTTGTTTGTGACTGCGTGAC+CGG + chr6_3:90477889-90477908 None:intergenic 50.0%
ACTGATTGCTGGTCGATTGC+AGG - chr6_3:90478461-90478480 Msa0964150:three_prime_UTR 50.0%
GTTGATACATGCACCAACGG+AGG - chr6_3:90478531-90478550 Msa0964150:three_prime_UTR 50.0%
ATCTAACTCAAGCCCTCCGT+TGG + chr6_3:90478547-90478566 None:intergenic 50.0%
! TAGGTTCGGTTTGACCGGAT+TGG - chr6_3:90479258-90479277 Msa0964150:intron 50.0%
ACCCAAAAACCTCGAGCAGT+TGG - chr6_3:90479940-90479959 Msa0964150:intron 50.0%
CAAATTCTGCTGCCATCGTG+AGG + chr6_3:90480260-90480279 None:intergenic 50.0%
ATGATCCTGACTAAGCCGCA+GGG + chr6_3:90480292-90480311 None:intergenic 50.0%
AATGATCCTGACTAAGCCGC+AGG + chr6_3:90480293-90480312 None:intergenic 50.0%
! ATCTCAGTGTCGTTCAGGGA+CGG - chr6_3:90481505-90481524 Msa0964150:intron 50.0%
!! TGGAGTCACAATGGGTTGCT+GGG + chr6_3:90481698-90481717 None:intergenic 50.0%
ATGTGGAAGGAAGGAGTGGT+GGG + chr6_3:90481794-90481813 None:intergenic 50.0%
GTTGATGTGGAAGGAAGGAG+TGG + chr6_3:90481798-90481817 None:intergenic 50.0%
! TGCCTAGCAGTTGATGTGGA+AGG + chr6_3:90481807-90481826 None:intergenic 50.0%
! TCAGAGAAAGCGTATGCGAG+AGG + chr6_3:90481914-90481933 None:intergenic 50.0%
TTCTACGCTTGTGTCAGGTG+GGG + chr6_3:90482106-90482125 None:intergenic 50.0%
GTTCTACGCTTGTGTCAGGT+GGG + chr6_3:90482107-90482126 None:intergenic 50.0%
!! TGTGGGAGGAAGAGTTGGTA+GGG + chr6_3:90482766-90482785 None:intergenic 50.0%
GGTGAATGGTAGTCATAGCG+AGG + chr6_3:90482995-90483014 None:intergenic 50.0%
CATTATCCACCCCCTCTACT+TGG - chr6_3:90483693-90483712 Msa0964150:intron 50.0%
TTATGGTGCCCAAGTAGAGG+GGG + chr6_3:90483705-90483724 None:intergenic 50.0%
GGCAACAAAACCCATACCAG+TGG - chr6_3:90483923-90483942 Msa0964150:intron 50.0%
AGGCGGATAACCACTGGTAT+GGG + chr6_3:90483936-90483955 None:intergenic 50.0%
TAGGCGGATAACCACTGGTA+TGG + chr6_3:90483937-90483956 None:intergenic 50.0%
GGTCAAATTGGGTTCGTAGG+CGG + chr6_3:90483953-90483972 None:intergenic 50.0%
GCCTACGAACCCAATTTGAC+CGG - chr6_3:90483952-90483971 Msa0964150:intron 50.0%
ACCGGTCAAATTGGGTTCGT+AGG + chr6_3:90483956-90483975 None:intergenic 50.0%
TCAAAACACGGGTAGGGGAT+AGG - chr6_3:90484013-90484032 Msa0964150:intron 50.0%
ACGGGTAGGGGATAGGTAAT+GGG - chr6_3:90484020-90484039 Msa0964150:intron 50.0%
TTTGGGTATGGGTTCGAGGT+GGG + chr6_3:90484056-90484075 None:intergenic 50.0%
CATGTTTGGGTATGGGTTCG+AGG + chr6_3:90484060-90484079 None:intergenic 50.0%
! GAGGTCGAGAGTGTGAGATA+TGG + chr6_3:90484218-90484237 None:intergenic 50.0%
AATCTCATTCCCGTCCTCGA+CGG + chr6_3:90484387-90484406 None:intergenic 50.0%
GGCATGAAAATAGGACGAGG+TGG + chr6_3:90484532-90484551 None:intergenic 50.0%
! ATCAAAGGCGATGGTGTCAG+AGG + chr6_3:90484884-90484903 None:intergenic 50.0%
TTAGATCTAGTCAGTGGCGG+GGG + chr6_3:90484995-90485014 None:intergenic 50.0%
! GCCCTCAAGGGCACATATTA+AGG - chr6_3:90485368-90485387 Msa0964150:intron 50.0%
TGGTGTGTTCTGTGCAGCTC+AGG - chr6_3:90477544-90477563 Msa0964150:intron 55.0%
GTGTTCTGTGCAGCTCAGGA+TGG - chr6_3:90477548-90477567 Msa0964150:intron 55.0%
TTTGGCTGGACTGCCTTCTG+TGG - chr6_3:90477599-90477618 Msa0964150:intron 55.0%
ACTGCCTTCTGTGGACCTGT+TGG - chr6_3:90477608-90477627 Msa0964150:intron 55.0%
!! AAGCTGGATAGCTCTGGGAC+CGG - chr6_3:90478582-90478601 Msa0964150:three_prime_UTR 55.0%
TGGGGGCGAATCGAACCTAA+AGG + chr6_3:90480721-90480740 None:intergenic 55.0%
!! GTGGAGTCACAATGGGTTGC+TGG + chr6_3:90481699-90481718 None:intergenic 55.0%
!!! GTGGTGGGTTGGCAGTGTTT+TGG + chr6_3:90481779-90481798 None:intergenic 55.0%
GATGTGGAAGGAAGGAGTGG+TGG + chr6_3:90481795-90481814 None:intergenic 55.0%
GGTTCTACGCTTGTGTCAGG+TGG + chr6_3:90482108-90482127 None:intergenic 55.0%
ACGGGTTCTACGCTTGTGTC+AGG + chr6_3:90482111-90482130 None:intergenic 55.0%
!! TGGGAGGAAGAGTTGGTAGG+GGG + chr6_3:90482764-90482783 None:intergenic 55.0%
!! GTGGGAGGAAGAGTTGGTAG+GGG + chr6_3:90482765-90482784 None:intergenic 55.0%
! GTGTGGGAGGAAGAGTTGGT+AGG + chr6_3:90482767-90482786 None:intergenic 55.0%
CCTAAGGTTGACACCCCCAA+AGG + chr6_3:90483359-90483378 None:intergenic 55.0%
!! CCTTTGGGGGTGTCAACCTT+AGG - chr6_3:90483356-90483375 Msa0964150:intron 55.0%
ATGTGAGATCGACAGGCCTG+TGG + chr6_3:90483630-90483649 None:intergenic 55.0%
GTTCGTAGGCGGATAACCAC+TGG + chr6_3:90483942-90483961 None:intergenic 55.0%
CACGGGTAGGGGATAGGTAA+TGG - chr6_3:90484019-90484038 Msa0964150:intron 55.0%
CGGGTAGGGGATAGGTAATG+GGG - chr6_3:90484021-90484040 Msa0964150:intron 55.0%
GTTTGGGTATGGGTTCGAGG+TGG + chr6_3:90484057-90484076 None:intergenic 55.0%
ATCCACAGTGGGGATGAGGA+TGG - chr6_3:90484344-90484363 Msa0964150:intron 55.0%
TCCACAGTGGGGATGAGGAT+GGG - chr6_3:90484345-90484364 Msa0964150:intron 55.0%
ATCTCATTCCCGTCCTCGAC+GGG + chr6_3:90484386-90484405 None:intergenic 55.0%
TAGTCCGCAGCTACGACATC+CGG - chr6_3:90484748-90484767 Msa0964150:intron 55.0%
!! GGTGTCGGTGGCTTTAGTGT+CGG + chr6_3:90484800-90484819 None:intergenic 55.0%
! CGTGTCAACATCAGGGGTGT+CGG + chr6_3:90484815-90484834 None:intergenic 55.0%
CGACACCCCTGATGTTGACA+CGG - chr6_3:90484813-90484832 Msa0964150:intron 55.0%
! AAAGGCGATGGTGTCAGAGG+CGG + chr6_3:90484881-90484900 None:intergenic 55.0%
GTCAGTGGCATCAAAGGCGA+TGG + chr6_3:90484893-90484912 None:intergenic 55.0%
!! AGGGGTGTCAGTGGCATCAA+AGG + chr6_3:90484899-90484918 None:intergenic 55.0%
CACTGACACCCCTAATGCCT+CGG - chr6_3:90484906-90484925 Msa0964150:CDS 55.0%
!! AGCTGGATAGCTCTGGGACC+GGG - chr6_3:90478583-90478602 Msa0964150:three_prime_UTR 60.0%
! GGGGGTAGGTTCGGTTTGAC+CGG - chr6_3:90479253-90479272 Msa0964150:intron 60.0%
ACAGTGGGTCACCGGATCAG+AGG - chr6_3:90479570-90479589 Msa0964150:intron 60.0%
CAGTGGGTCACCGGATCAGA+GGG - chr6_3:90479571-90479590 Msa0964150:intron 60.0%
CTTAGCCCTGCGGCTTAGTC+AGG - chr6_3:90480284-90480303 Msa0964150:intron 60.0%
!! GGAAGGAAGGAGTGGTGGGT+TGG + chr6_3:90481790-90481809 None:intergenic 60.0%
TGGGGCCAGCAATGGTGTGA+AGG + chr6_3:90482088-90482107 None:intergenic 60.0%
!! GGGAGGAAGAGTTGGTAGGG+GGG + chr6_3:90482763-90482782 None:intergenic 60.0%
TGAGATCGACAGGCCTGTGG+TGG + chr6_3:90483627-90483646 None:intergenic 60.0%
ATACCCGAACCCGTCGAGGA+CGG - chr6_3:90484374-90484393 Msa0964150:intron 60.0%
! ATTCCCGTCCTCGACGGGTT+CGG + chr6_3:90484381-90484400 None:intergenic 60.0%
GGCGTGTTGGAAATAGGGCG+AGG + chr6_3:90484497-90484516 None:intergenic 60.0%
!! GGTGGCTTTAGTGTCGGTGG+CGG + chr6_3:90484794-90484813 None:intergenic 60.0%
!! GTCGGTGGCTTTAGTGTCGG+TGG + chr6_3:90484797-90484816 None:intergenic 60.0%
!! GTCAACATCAGGGGTGTCGG+TGG + chr6_3:90484812-90484831 None:intergenic 60.0%
GGTGGCCGTGTCAACATCAG+GGG + chr6_3:90484821-90484840 None:intergenic 60.0%
CGGTGGCCGTGTCAACATCA+GGG + chr6_3:90484822-90484841 None:intergenic 60.0%
TCGGTGGCCGTGTCAACATC+AGG + chr6_3:90484823-90484842 None:intergenic 60.0%
!! CGAGGCATTAGGGGTGTCAG+TGG + chr6_3:90484908-90484927 None:intergenic 60.0%
! GGTGGTGTCCGAGGCATTAG+GGG + chr6_3:90484917-90484936 None:intergenic 60.0%
! CGGTGGTGTCCGAGGCATTA+GGG + chr6_3:90484918-90484937 None:intergenic 60.0%
! ACGGTGGTGTCCGAGGCATT+AGG + chr6_3:90484919-90484938 None:intergenic 60.0%
AAAGGCGATGGTGTCCGAGG+CGG + chr6_3:90484959-90484978 None:intergenic 60.0%
GTCAAAGGCGATGGTGTCCG+AGG + chr6_3:90484962-90484981 None:intergenic 60.0%
!! GTTGGTGGCGTCAAAGGCGA+TGG + chr6_3:90484971-90484990 None:intergenic 60.0%
GTGTCAGGTGGGGCCAGCAA+TGG + chr6_3:90482096-90482115 None:intergenic 65.0%
TGGTGCCCAAGTAGAGGGGG+TGG + chr6_3:90483702-90483721 None:intergenic 65.0%
GCCCATCCTCATCCCCACTG+TGG + chr6_3:90484349-90484368 None:intergenic 65.0%
CAGTGGGGATGAGGATGGGC+CGG - chr6_3:90484349-90484368 Msa0964150:intron 65.0%
AGTGGGGATGAGGATGGGCC+GGG - chr6_3:90484350-90484369 Msa0964150:intron 65.0%
! TCGACGGGTTCGGGTATCCC+CGG + chr6_3:90484371-90484390 None:intergenic 65.0%
TACCCGAACCCGTCGAGGAC+GGG - chr6_3:90484375-90484394 Msa0964150:intron 65.0%
! TTCCCGTCCTCGACGGGTTC+GGG + chr6_3:90484380-90484399 None:intergenic 65.0%
! GGTGCCGGATGTCGTAGCTG+CGG + chr6_3:90484755-90484774 None:intergenic 65.0%
! TCTGTCGGAGGTGGTGGTGC+CGG + chr6_3:90484770-90484789 None:intergenic 65.0%
!! AGTGTCGGTGGCGGCTCTGT+CGG + chr6_3:90484785-90484804 None:intergenic 65.0%
!! GGGGGTGTTGGTGGCGTCAA+AGG + chr6_3:90484977-90484996 None:intergenic 65.0%
! CTAGTCAGTGGCGGGGGTGT+TGG + chr6_3:90484989-90485008 None:intergenic 65.0%
GTGGGGATGAGGATGGGCCG+GGG - chr6_3:90484351-90484370 Msa0964150:intron 70.0%
GGGGATACCCGAACCCGTCG+AGG - chr6_3:90484370-90484389 Msa0964150:intron 70.0%
! GGTGCTGCAGGCGATGTCGG+TGG + chr6_3:90484839-90484858 None:intergenic 70.0%
!! GGCGGTGCTGCAGGCGATGT+CGG + chr6_3:90484842-90484861 None:intergenic 70.0%
! GATGGTGTCAGAGGCGGCGG+CGG + chr6_3:90484875-90484894 None:intergenic 70.0%
! GGCGATGGTGTCAGAGGCGG+CGG + chr6_3:90484878-90484897 None:intergenic 70.0%
CTCGGACACCACCGTCGCCT+CGG - chr6_3:90484924-90484943 Msa0964150:CDS 70.0%
!! GTCAGTGGCGGGGGTGTTGG+TGG + chr6_3:90484986-90485005 None:intergenic 70.0%
GGCGGCTCTGTCGGAGGTGG+TGG + chr6_3:90484776-90484795 None:intergenic 75.0%
! GGTGGCGGCTCTGTCGGAGG+TGG + chr6_3:90484779-90484798 None:intergenic 75.0%
! GTCGGTGGCGGCTCTGTCGG+AGG + chr6_3:90484782-90484801 None:intergenic 75.0%
CGAGGCGACGGTGGTGTCCG+AGG + chr6_3:90484926-90484945 None:intergenic 75.0%
GGTGGTGTCCGAGGCGACGG+TGG + chr6_3:90484935-90484954 None:intergenic 75.0%
GGCGGTGGTGTCCGAGGCGA+CGG + chr6_3:90484938-90484957 None:intergenic 75.0%
CTCGGACACCACCGCCGCCT+CGG - chr6_3:90484942-90484961 Msa0964150:CDS 75.0%
GATGGTGTCCGAGGCGGCGG+TGG + chr6_3:90484953-90484972 None:intergenic 75.0%
GGCGATGGTGTCCGAGGCGG+CGG + chr6_3:90484956-90484975 None:intergenic 75.0%
! CGCCTGCAGCACCGCCGCCT+CGG - chr6_3:90484846-90484865 Msa0964150:CDS 80.0%
!!! GTCCGAGGCGGCGGTGCTGC+AGG + chr6_3:90484851-90484870 None:intergenic 80.0%
! AGAGGCGGCGGCGGTGTCCG+AGG + chr6_3:90484866-90484885 None:intergenic 80.0%
! CGAGGCGGCGGTGGTGTCCG+AGG + chr6_3:90484944-90484963 None:intergenic 80.0%
! GGCGGCGGTGTCCGAGGCGG+CGG + chr6_3:90484860-90484879 None:intergenic 85.0%
! GGCGGCGGCGGTGTCCGAGG+CGG + chr6_3:90484863-90484882 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 90477404 90486068 90477404 ID=Msa0964150;Name=Msa0964150
chr6_3 mRNA 90477404 90486068 90477404 ID=Msa0964150-mRNA-1;Parent=Msa0964150;Name=Msa0964150-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.6|0.66|1|0|0|6|452|181
chr6_3 exon 90477404 90477546 90477404 ID=Msa0964150-mRNA-1:exon:16261;Parent=Msa0964150-mRNA-1
chr6_3 exon 90477677 90477712 90477677 ID=Msa0964150-mRNA-1:exon:16260;Parent=Msa0964150-mRNA-1
chr6_3 exon 90478453 90478770 90478453 ID=Msa0964150-mRNA-1:exon:16259;Parent=Msa0964150-mRNA-1
chr6_3 exon 90483511 90483633 90483511 ID=Msa0964150-mRNA-1:exon:16258;Parent=Msa0964150-mRNA-1
chr6_3 exon 90484846 90484989 90484846 ID=Msa0964150-mRNA-1:exon:16257;Parent=Msa0964150-mRNA-1
chr6_3 exon 90485835 90486068 90485835 ID=Msa0964150-mRNA-1:exon:16256;Parent=Msa0964150-mRNA-1
chr6_3 CDS 90485835 90486068 90485835 ID=Msa0964150-mRNA-1:cds;Parent=Msa0964150-mRNA-1
chr6_3 CDS 90484846 90484989 90484846 ID=Msa0964150-mRNA-1:cds;Parent=Msa0964150-mRNA-1
chr6_3 CDS 90483511 90483633 90483511 ID=Msa0964150-mRNA-1:cds;Parent=Msa0964150-mRNA-1
chr6_3 CDS 90478726 90478770 90478726 ID=Msa0964150-mRNA-1:cds;Parent=Msa0964150-mRNA-1
chr6_3 three_prime_UTR 90478453 90478725 90478453 ID=Msa0964150-mRNA-1:three_prime_utr;Parent=Msa0964150-mRNA-1
chr6_3 three_prime_UTR 90477677 90477712 90477677 ID=Msa0964150-mRNA-1:three_prime_utr;Parent=Msa0964150-mRNA-1
chr6_3 three_prime_UTR 90477404 90477546 90477404 ID=Msa0964150-mRNA-1:three_prime_utr;Parent=Msa0964150-mRNA-1
Gene Sequence

>Msa0964150

ATGTCGAAGCAGCTTTTTCTATTGGATAAGGTGTTGATATTTTGTGTTCTAGCACTTGCATCTGCTCAAAGAGCTAACAACGTGAAGGCTACATATAAATCATACAATCCTCATAAAATTAAATGGAACTTGAACACATCTGGTGTGTTCTGTGCAGCTCAGGATGGGAACAAATCATTGTCATGGCGTAGTGAATTTGGCTGGACTGCCTTCTGTGGACCTGTTGGCAAAGGTGTGACAAACAAAGAAAATGGGATTATAGTCTCTAAAATAGTAAGAATTGTTGATACATGCACCAACGGAGGGCTTGAGTTAGATATTGATGTGTTTCAAAAGCTGGATAGCTCTGGGACCGGGAATGCTCAAAGTTACCTTATGATTGCAACACAAAAGGTGGGAATTGTGGTTACATCTCAACAGAGACGCGACGACAAGCAATTGATGTATCGTCAAAAAGCGAAAGGTCATTCAACATATCAACCCAAAAACCTCGAGCAGTTGTTTGCAAAGGAAAATCGCTTTTATATGGCTCGTCGTCTTGTCTAG
Protein sequence

>Msa0964150

MSKQLFLLDKVLIFCVLALASAQRANNVKATYKSYNPHKIKWNLNTSGVFCAAQDGNKSLSWRSEFGWTAFCGPVGKGVTNKENGIIVSKIVRIVDTCTNGGLELDIDVFQKLDSSGTGNAQSYLMIATQKVGIVVTSQQRRDDKQLMYRQKAKGHSTYQPKNLEQLFAKENRFYMARRLV*