Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256430 | KEH31505.1 | 69.628 | 349 | 79 | 2 | 1 | 349 | 104 | 425 | 5.44e-159 | 466 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256430 | sp|Q9FLW0|Y5241_ARATH | 34.309 | 376 | 175 | 14 | 2 | 359 | 107 | 428 | 1.22e-37 | 147 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa1256430 | 0.816351 | 5.784064e-52 | -8.615850e-47 |
| Msa0004340 | Msa1256430 | 0.836819 | 7.482658e-57 | -8.615850e-47 |
| Msa0009530 | Msa1256430 | 0.800932 | 1.142545e-48 | -8.615850e-47 |
| Msa0024500 | Msa1256430 | 0.836312 | 1.007519e-56 | -8.615850e-47 |
| Msa0027030 | Msa1256430 | 0.803140 | 4.018283e-49 | -8.615850e-47 |
| Msa0037180 | Msa1256430 | -0.801349 | 9.390132e-49 | -8.615850e-47 |
| Msa0067750 | Msa1256430 | 0.801726 | 7.857458e-49 | -8.615850e-47 |
| Msa0072830 | Msa1256430 | 0.806460 | 8.138758e-50 | -8.615850e-47 |
| Msa0072860 | Msa1256430 | 0.801468 | 8.878557e-49 | -8.615850e-47 |
| Msa0080810 | Msa1256430 | 0.822292 | 2.561807e-53 | -8.615850e-47 |
| Msa0081290 | Msa1256430 | 0.815251 | 1.017166e-51 | -8.615850e-47 |
| Msa0081700 | Msa1256430 | 0.808372 | 3.199388e-50 | -8.615850e-47 |
| Msa0089010 | Msa1256430 | 0.835980 | 1.223230e-56 | -8.615850e-47 |
| Msa0099090 | Msa1256430 | 0.806884 | 6.622222e-50 | -8.615850e-47 |
| Msa0116470 | Msa1256430 | 0.801688 | 8.002162e-49 | -8.615850e-47 |
| Msa0116510 | Msa1256430 | 0.813022 | 3.158762e-51 | -8.615850e-47 |
| Msa0120320 | Msa1256430 | 0.848351 | 6.476840e-60 | -8.615850e-47 |
| Msa0607410 | Msa1256430 | 0.817541 | 3.125320e-52 | -8.615850e-47 |
| Msa0607620 | Msa1256430 | 0.808961 | 2.394912e-50 | -8.615850e-47 |
| Msa0608940 | Msa1256430 | 0.831153 | 1.961510e-55 | -8.615850e-47 |
| Msa0612880 | Msa1256430 | 0.808316 | 3.287622e-50 | -8.615850e-47 |
| Msa0615430 | Msa1256430 | 0.848629 | 5.424909e-60 | -8.615850e-47 |
| Msa0621670 | Msa1256430 | 0.828093 | 1.088710e-54 | -8.615850e-47 |
| Msa0625900 | Msa1256430 | 0.806262 | 8.958424e-50 | -8.615850e-47 |
| Msa0647860 | Msa1256430 | 0.833561 | 4.968464e-56 | -8.615850e-47 |
| Msa0648260 | Msa1256430 | 0.800031 | 1.743801e-48 | -8.615850e-47 |
| Msa0649530 | Msa1256430 | 0.833501 | 5.144497e-56 | -8.615850e-47 |
| Msa0654880 | Msa1256430 | 0.825632 | 4.216652e-54 | -8.615850e-47 |
| Msa0659020 | Msa1256430 | 0.802261 | 6.101472e-49 | -8.615850e-47 |
| Msa0663690 | Msa1256430 | 0.802586 | 5.230610e-49 | -8.615850e-47 |
| Msa0671070 | Msa1256430 | 0.829455 | 5.099983e-55 | -8.615850e-47 |
| Msa0690580 | Msa1256430 | 0.802446 | 5.589128e-49 | -8.615850e-47 |
| Msa0691740 | Msa1256430 | 0.832633 | 8.458678e-56 | -8.615850e-47 |
| Msa0698480 | Msa1256430 | 0.841137 | 5.701759e-58 | -8.615850e-47 |
| Msa0698650 | Msa1256430 | 0.835730 | 1.415836e-56 | -8.615850e-47 |
| Msa0717540 | Msa1256430 | 0.811354 | 7.301105e-51 | -8.615850e-47 |
| Msa0718920 | Msa1256430 | 0.804187 | 2.436501e-49 | -8.615850e-47 |
| Msa0733460 | Msa1256430 | 0.806605 | 7.584891e-50 | -8.615850e-47 |
| Msa0752540 | Msa1256430 | 0.812215 | 4.742681e-51 | -8.615850e-47 |
| Msa0754020 | Msa1256430 | 0.843338 | 1.490408e-58 | -8.615850e-47 |
| Msa0754190 | Msa1256430 | 0.815792 | 7.710112e-52 | -8.615850e-47 |
| Msa0756670 | Msa1256430 | 0.812044 | 5.167538e-51 | -8.615850e-47 |
| Msa0769910 | Msa1256430 | 0.820362 | 7.138859e-53 | -8.615850e-47 |
| Msa0770540 | Msa1256430 | 0.800438 | 1.441253e-48 | -8.615850e-47 |
| Msa0797980 | Msa1256430 | 0.814592 | 1.424448e-51 | -8.615850e-47 |
| Msa0807100 | Msa1256430 | 0.838297 | 3.126557e-57 | -8.615850e-47 |
| Msa0807870 | Msa1256430 | 0.806767 | 7.011409e-50 | -8.615850e-47 |
| Msa0833030 | Msa1256430 | 0.838319 | 3.086371e-57 | -8.615850e-47 |
| Msa0836060 | Msa1256430 | 0.801373 | 9.283437e-49 | -8.615850e-47 |
| Msa0840450 | Msa1256430 | 0.804529 | 2.068030e-49 | -8.615850e-47 |
| Msa0147540 | Msa1256430 | 0.839102 | 1.937008e-57 | -8.615850e-47 |
| Msa0147800 | Msa1256430 | 0.838717 | 2.435488e-57 | -8.615850e-47 |
| Msa0160650 | Msa1256430 | 0.818122 | 2.310541e-52 | -8.615850e-47 |
| Msa0163530 | Msa1256430 | 0.845245 | 4.581158e-59 | -8.615850e-47 |
| Msa0173370 | Msa1256430 | 0.811121 | 8.202359e-51 | -8.615850e-47 |
| Msa0180290 | Msa1256430 | 0.806352 | 8.576088e-50 | -8.615850e-47 |
| Msa0184510 | Msa1256430 | 0.801905 | 7.221253e-49 | -8.615850e-47 |
| Msa0194750 | Msa1256430 | 0.808945 | 2.413044e-50 | -8.615850e-47 |
| Msa0195140 | Msa1256430 | 0.814183 | 1.754357e-51 | -8.615850e-47 |
| Msa0195150 | Msa1256430 | 0.805311 | 1.419095e-49 | -8.615850e-47 |
| Msa0208040 | Msa1256430 | 0.811574 | 6.539333e-51 | -8.615850e-47 |
| Msa0209370 | Msa1256430 | 0.801588 | 8.386896e-49 | -8.615850e-47 |
| Msa0218430 | Msa1256430 | 0.827421 | 1.579355e-54 | -8.615850e-47 |
| Msa0225070 | Msa1256430 | 0.835247 | 1.875373e-56 | -8.615850e-47 |
| Msa0236690 | Msa1256430 | 0.824832 | 6.519649e-54 | -8.615850e-47 |
| Msa1225140 | Msa1256430 | 0.829482 | 5.023488e-55 | -8.615850e-47 |
| Msa1228600 | Msa1256430 | 0.805168 | 1.520224e-49 | -8.615850e-47 |
| Msa1235940 | Msa1256430 | 0.861434 | 1.028908e-63 | -8.615850e-47 |
| Msa1236860 | Msa1256430 | 0.801393 | 9.195451e-49 | -8.615850e-47 |
| Msa1256430 | Msa1277580 | 0.870973 | 9.729705e-67 | -8.615850e-47 |
| Msa1256430 | Msa1279310 | 0.818922 | 1.522354e-52 | -8.615850e-47 |
| Msa1256430 | Msa1279320 | 0.845853 | 3.134612e-59 | -8.615850e-47 |
| Msa1256430 | Msa1296680 | 0.945971 | 1.121366e-104 | -8.615850e-47 |
| Msa1256430 | Msa1297220 | 0.811310 | 7.463455e-51 | -8.615850e-47 |
| Msa1256430 | Msa1323260 | 0.837140 | 6.194700e-57 | -8.615850e-47 |
| Msa1256430 | Msa1342360 | 0.801912 | 7.196957e-49 | -8.615850e-47 |
| Msa1256430 | Msa1343450 | 0.827114 | 1.871073e-54 | -8.615850e-47 |
| Msa1256430 | Msa1346220 | 0.820339 | 7.225924e-53 | -8.615850e-47 |
| Msa1256430 | Msa1346340 | 0.803793 | 2.941599e-49 | -8.615850e-47 |
| Msa1256430 | Msa1348860 | 0.832468 | 9.291625e-56 | -8.615850e-47 |
| Msa1256430 | Msa1350580 | 0.807282 | 5.455902e-50 | -8.615850e-47 |
| Msa1256430 | Msa1351070 | 0.822552 | 2.228679e-53 | -8.615850e-47 |
| Msa1256430 | Msa1356730 | 0.803440 | 3.482031e-49 | -8.615850e-47 |
| Msa1256430 | Msa1371060 | 0.835778 | 1.376370e-56 | -8.615850e-47 |
| Msa1256430 | Msa1376010 | 0.828150 | 1.054945e-54 | -8.615850e-47 |
| Msa1256430 | Msa1377980 | 0.814732 | 1.326103e-51 | -8.615850e-47 |
| Msa1256430 | Msa1379270 | 0.804393 | 2.207128e-49 | -8.615850e-47 |
| Msa1256430 | Msa1382100 | 0.815994 | 6.950996e-52 | -8.615850e-47 |
| Msa1256430 | Msa1384410 | 0.819327 | 1.231337e-52 | -8.615850e-47 |
| Msa1256430 | Msa1394810 | 0.829142 | 6.072791e-55 | -8.615850e-47 |
| Msa1256430 | Msa1408280 | 0.814769 | 1.301314e-51 | -8.615850e-47 |
| Msa1256430 | Msa1408860 | 0.840975 | 6.289016e-58 | -8.615850e-47 |
| Msa1256430 | Msa1412270 | 0.804738 | 1.870558e-49 | -8.615850e-47 |
| Msa1256430 | Msa1412740 | 0.813993 | 1.931786e-51 | -8.615850e-47 |
| Msa1256430 | Msa1414780 | 0.834473 | 2.936810e-56 | -8.615850e-47 |
| Msa1256430 | Msa1418840 | 0.826615 | 2.461140e-54 | -8.615850e-47 |
| Msa1256430 | Msa1421540 | -0.800101 | 1.687864e-48 | -8.615850e-47 |
| Msa1256430 | Msa1422150 | 0.850406 | 1.733723e-60 | -8.615850e-47 |
| Msa1256430 | Msa1422160 | 0.831599 | 1.523172e-55 | -8.615850e-47 |
| Msa1256430 | Msa1436660 | 0.828915 | 6.893180e-55 | -8.615850e-47 |
| Msa1256430 | Msa1450780 | 0.854912 | 8.972073e-62 | -8.615850e-47 |
| Msa1256430 | Msa1456620 | 0.816395 | 5.652546e-52 | -8.615850e-47 |
| Msa1256430 | Msa1459630 | 0.805518 | 1.284538e-49 | -8.615850e-47 |
| Msa1256430 | Msa1460530 | 0.849761 | 2.627909e-60 | -8.615850e-47 |
| Msa0364910 | Msa1256430 | 0.811575 | 6.535754e-51 | -8.615850e-47 |
| Msa0367590 | Msa1256430 | 0.824057 | 9.921555e-54 | -8.615850e-47 |
| Msa0403740 | Msa1256430 | 0.802954 | 4.390510e-49 | -8.615850e-47 |
| Msa0451710 | Msa1256430 | 0.803892 | 2.805862e-49 | -8.615850e-47 |
| Msa0452120 | Msa1256430 | 0.804951 | 1.687973e-49 | -8.615850e-47 |
| Msa0452490 | Msa1256430 | 0.802539 | 5.348006e-49 | -8.615850e-47 |
| Msa0456450 | Msa1256430 | 0.801811 | 7.548350e-49 | -8.615850e-47 |
| Msa0471130 | Msa1256430 | 0.806067 | 9.849077e-50 | -8.615850e-47 |
| Msa0984820 | Msa1256430 | 0.800281 | 1.551625e-48 | -8.615850e-47 |
| Msa1009150 | Msa1256430 | 0.842669 | 2.245527e-58 | -8.615850e-47 |
| Msa1009160 | Msa1256430 | 0.813473 | 2.514131e-51 | -8.615850e-47 |
| Msa1009170 | Msa1256430 | 0.817553 | 3.106628e-52 | -8.615850e-47 |
| Msa1031530 | Msa1256430 | 0.830283 | 3.203962e-55 | -8.615850e-47 |
| Msa1038610 | Msa1256430 | 0.802743 | 4.853898e-49 | -8.615850e-47 |
| Msa1043020 | Msa1256430 | 0.806849 | 6.734721e-50 | -8.615850e-47 |
| Msa1044790 | Msa1256430 | 0.808820 | 2.566471e-50 | -8.615850e-47 |
| Msa1050540 | Msa1256430 | 0.841144 | 5.677120e-58 | -8.615850e-47 |
| Msa1050640 | Msa1256430 | 0.806079 | 9.792619e-50 | -8.615850e-47 |
| Msa1052030 | Msa1256430 | 0.814883 | 1.227985e-51 | -8.615850e-47 |
| Msa1070630 | Msa1256430 | 0.832984 | 6.917016e-56 | -8.615850e-47 |
| Msa1078300 | Msa1256430 | -0.800925 | 1.146600e-48 | -8.615850e-47 |
| Msa1078590 | Msa1256430 | 0.828650 | 7.990648e-55 | -8.615850e-47 |
| Msa1078760 | Msa1256430 | 0.825450 | 4.656194e-54 | -8.615850e-47 |
| Msa1093190 | Msa1256430 | 0.813745 | 2.191226e-51 | -8.615850e-47 |
| Msa1096510 | Msa1256430 | 0.800459 | 1.426763e-48 | -8.615850e-47 |
| Msa1096520 | Msa1256430 | 0.814195 | 1.743299e-51 | -8.615850e-47 |
| Msa1096570 | Msa1256430 | 0.812566 | 3.974428e-51 | -8.615850e-47 |
| Msa1098340 | Msa1256430 | 0.835489 | 1.628697e-56 | -8.615850e-47 |
| Msa1098350 | Msa1256430 | 0.840618 | 7.802677e-58 | -8.615850e-47 |
| Msa1101300 | Msa1256430 | 0.825386 | 4.822753e-54 | -8.615850e-47 |
| Msa0240590 | Msa1256430 | 0.841480 | 4.632261e-58 | -8.615850e-47 |
| Msa0266140 | Msa1256430 | 0.817668 | 2.925937e-52 | -8.615850e-47 |
| Msa0269660 | Msa1256430 | 0.815140 | 1.076926e-51 | -8.615850e-47 |
| Msa0279090 | Msa1256430 | 0.837997 | 3.735301e-57 | -8.615850e-47 |
| Msa0295680 | Msa1256430 | -0.812913 | 3.336553e-51 | -8.615850e-47 |
| Msa0297270 | Msa1256430 | 0.822413 | 2.401121e-53 | -8.615850e-47 |
| Msa0304060 | Msa1256430 | 0.820482 | 6.700751e-53 | -8.615850e-47 |
| Msa0308300 | Msa1256430 | 0.803667 | 3.125011e-49 | -8.615850e-47 |
| Msa0328870 | Msa1256430 | -0.806676 | 7.327132e-50 | -8.615850e-47 |
| Msa0360130 | Msa1256430 | 0.801062 | 1.074981e-48 | -8.615850e-47 |
| Msa0364030 | Msa1256430 | 0.802855 | 4.602713e-49 | -8.615850e-47 |
| Msa1109500 | Msa1256430 | 0.824085 | 9.768666e-54 | -8.615850e-47 |
| Msa1112230 | Msa1256430 | 0.817378 | 3.402032e-52 | -8.615850e-47 |
| Msa1113280 | Msa1256430 | 0.813767 | 2.166989e-51 | -8.615850e-47 |
| Msa1138440 | Msa1256430 | 0.831995 | 1.216895e-55 | -8.615850e-47 |
| Msa1138480 | Msa1256430 | 0.811881 | 5.608342e-51 | -8.615850e-47 |
| Msa1138490 | Msa1256430 | 0.842611 | 2.326970e-58 | -8.615850e-47 |
| Msa1143860 | Msa1256430 | 0.828909 | 6.914905e-55 | -8.615850e-47 |
| Msa1145930 | Msa1256430 | 0.827814 | 1.270631e-54 | -8.615850e-47 |
| Msa1157310 | Msa1256430 | 0.801869 | 7.346481e-49 | -8.615850e-47 |
| Msa1158450 | Msa1256430 | 0.834553 | 2.803790e-56 | -8.615850e-47 |
| Msa1169590 | Msa1256430 | 0.818624 | 1.778955e-52 | -8.615850e-47 |
| Msa1169600 | Msa1256430 | 0.807440 | 5.049334e-50 | -8.615850e-47 |
| Msa1175850 | Msa1256430 | 0.864388 | 1.260618e-64 | -8.615850e-47 |
| Msa1181730 | Msa1256430 | 0.826454 | 2.689290e-54 | -8.615850e-47 |
| Msa1190350 | Msa1256430 | 0.811866 | 5.651805e-51 | -8.615850e-47 |
| Msa1191960 | Msa1256430 | 0.802877 | 4.553765e-49 | -8.615850e-47 |
| Msa1199750 | Msa1256430 | 0.800513 | 1.391535e-48 | -8.615850e-47 |
| Msa1202710 | Msa1256430 | 0.814599 | 1.419364e-51 | -8.615850e-47 |
| Msa1204470 | Msa1256430 | 0.981249 | 3.941756e-152 | -8.615850e-47 |
| Msa1205270 | Msa1256430 | 0.816895 | 4.368420e-52 | -8.615850e-47 |
| Msa0508780 | Msa1256430 | 0.801491 | 8.779585e-49 | -8.615850e-47 |
| Msa0517460 | Msa1256430 | 0.820989 | 5.125567e-53 | -8.615850e-47 |
| Msa0530830 | Msa1256430 | 0.810564 | 1.082388e-50 | -8.615850e-47 |
| Msa0538050 | Msa1256430 | 0.811216 | 7.821321e-51 | -8.615850e-47 |
| Msa0543310 | Msa1256430 | 0.807308 | 5.386720e-50 | -8.615850e-47 |
| Msa0555510 | Msa1256430 | 0.814938 | 1.193753e-51 | -8.615850e-47 |
| Msa0561420 | Msa1256430 | 0.830585 | 2.702603e-55 | -8.615850e-47 |
| Msa0563230 | Msa1256430 | 0.802366 | 5.806290e-49 | -8.615850e-47 |
| Msa0565150 | Msa1256430 | 0.851602 | 7.975432e-61 | -8.615850e-47 |
| Msa0565530 | Msa1256430 | 0.805279 | 1.441258e-49 | -8.615850e-47 |
| Msa0565860 | Msa1256430 | 0.803622 | 3.192927e-49 | -8.615850e-47 |
| Msa0577050 | Msa1256430 | 0.802921 | 4.460543e-49 | -8.615850e-47 |
| Msa0579170 | Msa1256430 | 0.801790 | 7.626364e-49 | -8.615850e-47 |
| Msa0579230 | Msa1256430 | 0.804212 | 2.406943e-49 | -8.615850e-47 |
| Msa0592400 | Msa1256430 | 0.825201 | 5.334488e-54 | -8.615850e-47 |
| Msa0844970 | Msa1256430 | 0.815093 | 1.103228e-51 | -8.615850e-47 |
| Msa0852090 | Msa1256430 | 0.812134 | 4.939435e-51 | -8.615850e-47 |
| Msa0862230 | Msa1256430 | 0.814174 | 1.762340e-51 | -8.615850e-47 |
| Msa0884300 | Msa1256430 | 0.810290 | 1.240510e-50 | -8.615850e-47 |
| Msa0907170 | Msa1256430 | -0.806144 | 9.489106e-50 | -8.615850e-47 |
| Msa0925630 | Msa1256430 | 0.818408 | 1.991499e-52 | -8.615850e-47 |
| Msa0931550 | Msa1256430 | 0.832782 | 7.767127e-56 | -8.615850e-47 |
| Msa0932050 | Msa1256430 | 0.803359 | 3.620631e-49 | -8.615850e-47 |
| Msa0950470 | Msa1256430 | 0.835219 | 1.905743e-56 | -8.615850e-47 |
| Msa0950570 | Msa1256430 | 0.839895 | 1.205003e-57 | -8.615850e-47 |
| Msa0964150 | Msa1256430 | 0.827604 | 1.427729e-54 | -8.615850e-47 |
| Msa0967900 | Msa1256430 | 0.838189 | 3.333591e-57 | -8.615850e-47 |
| Msa0975440 | Msa1256430 | 0.809946 | 1.471620e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256430 | MtrunA17_Chr4g0053521 | 69.628 | 349 | 79 | 2 | 1 | 349 | 104 | 425 | 5.51e-153 | 466 |
| Msa1256430 | MtrunA17_Chr4g0053521 | 64.742 | 329 | 86 | 4 | 1 | 328 | 660 | 959 | 6.03e-129 | 401 |
| Msa1256430 | MtrunA17_Chr4g0053571 | 64.035 | 342 | 90 | 6 | 1 | 340 | 104 | 414 | 4.84e-136 | 408 |
| Msa1256430 | MtrunA17_Chr4g0053561 | 57.647 | 340 | 96 | 4 | 1 | 340 | 102 | 393 | 7.02e-120 | 364 |
| Msa1256430 | MtrunA17_Chr4g0053601 | 70.000 | 160 | 48 | 0 | 73 | 232 | 1 | 160 | 7.44e-80 | 241 |
| Msa1256430 | MtrunA17_Chr1g0202711 | 31.476 | 359 | 196 | 12 | 1 | 352 | 120 | 435 | 2.98e-38 | 145 |
| Msa1256430 | MtrunA17_Chr6g0468691 | 31.522 | 368 | 198 | 13 | 2 | 358 | 104 | 428 | 2.63e-35 | 137 |
| Msa1256430 | MtrunA17_Chr4g0061081 | 31.818 | 374 | 198 | 13 | 2 | 358 | 119 | 452 | 2.77e-33 | 131 |
| Msa1256430 | MtrunA17_Chr2g0318301 | 32.493 | 357 | 185 | 13 | 2 | 345 | 105 | 418 | 2.14e-31 | 125 |
| Msa1256430 | MtrunA17_Chr4g0030441 | 31.267 | 371 | 194 | 11 | 2 | 357 | 111 | 435 | 3.71e-30 | 122 |
| Msa1256430 | MtrunA17_Chr7g0248161 | 32.308 | 325 | 176 | 15 | 2 | 318 | 101 | 389 | 7.23e-30 | 119 |
| Msa1256430 | MtrunA17_Chr2g0327671 | 32.836 | 335 | 175 | 14 | 2 | 328 | 110 | 402 | 1.18e-27 | 114 |
| Msa1256430 | MtrunA17_Chr8g0361611 | 29.363 | 361 | 197 | 11 | 2 | 359 | 109 | 414 | 1.03e-26 | 111 |
| Msa1256430 | MtrunA17_Chr4g0053591 | 69.231 | 78 | 22 | 1 | 275 | 352 | 1 | 76 | 1.05e-23 | 102 |
| Msa1256430 | MtrunA17_Chr8g0352381 | 28.261 | 322 | 189 | 11 | 2 | 318 | 137 | 421 | 4.40e-23 | 100 |
| Msa1256430 | MtrunA17_Chr1g0165521 | 28.727 | 275 | 148 | 10 | 49 | 318 | 137 | 368 | 4.14e-21 | 95.1 |
| Msa1256430 | MtrunA17_Chr2g0292501 | 26.425 | 386 | 212 | 15 | 2 | 358 | 105 | 447 | 4.00e-18 | 86.3 |
| Msa1256430 | MtrunA17_Chr7g0245131 | 26.686 | 341 | 200 | 14 | 2 | 323 | 105 | 414 | 6.84e-16 | 79.3 |
| Msa1256430 | MtrunA17_Chr5g0420151 | 26.344 | 372 | 185 | 19 | 2 | 337 | 113 | 431 | 5.28e-14 | 73.6 |
| Msa1256430 | MtrunA17_Chr5g0420171 | 26.685 | 371 | 185 | 21 | 2 | 337 | 112 | 430 | 2.81e-13 | 71.2 |
| Msa1256430 | MtrunA17_Chr6g0455321 | 24.745 | 392 | 228 | 20 | 2 | 357 | 108 | 468 | 1.76e-11 | 65.9 |
| Msa1256430 | MtrunA17_Chr7g0274261 | 25.373 | 335 | 190 | 16 | 2 | 318 | 113 | 405 | 1.84e-11 | 65.9 |
| Msa1256430 | MtrunA17_Chr1g0190581 | 24.925 | 333 | 195 | 14 | 2 | 318 | 102 | 395 | 1.88e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256430 | AT5G24010.1 | 34.309 | 376 | 175 | 14 | 2 | 359 | 107 | 428 | 1.24e-38 | 147 |
| Msa1256430 | AT2G23200.1 | 32.951 | 349 | 165 | 13 | 2 | 339 | 112 | 402 | 6.74e-35 | 136 |
| Msa1256430 | AT5G61350.1 | 32.012 | 328 | 178 | 11 | 2 | 323 | 112 | 400 | 1.98e-33 | 132 |
| Msa1256430 | AT4G00300.1 | 31.045 | 335 | 184 | 14 | 1 | 323 | 104 | 403 | 1.81e-28 | 115 |
| Msa1256430 | AT4G39110.1 | 29.650 | 371 | 206 | 14 | 2 | 357 | 131 | 461 | 2.73e-28 | 117 |
| Msa1256430 | AT2G21480.1 | 29.380 | 371 | 207 | 15 | 2 | 357 | 130 | 460 | 2.85e-27 | 114 |
| Msa1256430 | AT5G54380.1 | 29.443 | 377 | 201 | 12 | 2 | 359 | 105 | 435 | 3.70e-27 | 113 |
| Msa1256430 | AT3G46290.1 | 31.680 | 363 | 193 | 16 | 2 | 353 | 100 | 418 | 4.05e-26 | 110 |
| Msa1256430 | AT5G59700.1 | 30.055 | 366 | 201 | 14 | 2 | 356 | 100 | 421 | 4.27e-25 | 107 |
| Msa1256430 | AT2G39360.1 | 26.888 | 331 | 180 | 12 | 1 | 318 | 99 | 380 | 1.09e-20 | 94.4 |
| Msa1256430 | AT1G30570.1 | 27.320 | 388 | 212 | 16 | 2 | 359 | 107 | 454 | 1.19e-20 | 94.4 |
| Msa1256430 | AT5G28680.1 | 24.629 | 337 | 198 | 13 | 1 | 318 | 101 | 400 | 3.13e-14 | 74.7 |
| Msa1256430 | AT5G28680.2 | 24.629 | 337 | 198 | 13 | 1 | 318 | 101 | 400 | 3.13e-14 | 74.7 |
| Msa1256430 | AT3G04690.1 | 23.881 | 335 | 201 | 13 | 1 | 318 | 100 | 397 | 3.30e-13 | 71.6 |
| Msa1256430 | AT3G51550.1 | 25.989 | 354 | 180 | 17 | 2 | 323 | 111 | 414 | 9.70e-13 | 70.1 |
Find 65 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGCGGTGGGTTCAGTTCT+TGG | 0.175080 | 8_2:-56356905 | Msa1256430:CDS |
| CCTATGTCTATAGTTGAATT+TGG | 0.191792 | 8_2:+56357421 | None:intergenic |
| ATTTGAATTTGAATAATCTA+AGG | 0.230781 | 8_2:+56356949 | None:intergenic |
| TTGAACCGTTAACACTTTCT+TGG | 0.267645 | 8_2:+56357374 | None:intergenic |
| GCAACCTCAACCGACGTATT+AGG | 0.295301 | 8_2:+56357037 | None:intergenic |
| TTTAATTATACTTTCTGTTA+TGG | 0.297888 | 8_2:-56356879 | Msa1256430:CDS |
| TACAATAAATCTAGCGTTCA+AGG | 0.328154 | 8_2:-56357652 | Msa1256430:CDS |
| ACCACAAAATCATAATAATA+AGG | 0.333737 | 8_2:+56357100 | None:intergenic |
| GCAGTTCTATAAACAATATC+TGG | 0.358447 | 8_2:+56357397 | None:intergenic |
| GTGAAACGTGCAATTGAATT+GGG | 0.365285 | 8_2:+56357676 | None:intergenic |
| CAAAAGGTTTAAACATAAGT+TGG | 0.398467 | 8_2:-56357354 | Msa1256430:CDS |
| ACCGATGTTAAGACGGTGTT+TGG | 0.400439 | 8_2:+56357585 | None:intergenic |
| AACGCTCAGAATGGTTCCTT+TGG | 0.410349 | 8_2:-56357484 | Msa1256430:CDS |
| ACAAAATACTCGTTTACTAA+AGG | 0.411408 | 8_2:+56357802 | None:intergenic |
| GAAAGTGTTAACGGTTCAAA+AGG | 0.414206 | 8_2:-56357370 | Msa1256430:CDS |
| AGTGAAACGTGCAATTGAAT+TGG | 0.419570 | 8_2:+56357675 | None:intergenic |
| TGTTCCTGTGGAGAACAATA+TGG | 0.421495 | 8_2:-56357329 | Msa1256430:CDS |
| GTGAGGAGAATGAAAAGAAA+TGG | 0.422006 | 8_2:+56357914 | None:intergenic |
| TGAATTGGGGATTAAATGAC+TGG | 0.426777 | 8_2:+56357690 | None:intergenic |
| TTTGCAGTGGAAAGGTTAGT+TGG | 0.435305 | 8_2:+56357892 | None:intergenic |
| GATTAGTCTTCCCGTGGCGG+TGG | 0.439332 | 8_2:-56356918 | Msa1256430:CDS |
| TGAACCGTTAACACTTTCTT+GGG | 0.445843 | 8_2:+56357375 | None:intergenic |
| TGTTATGGTGGTTTCTCCAC+CGG | 0.455108 | 8_2:-56356864 | Msa1256430:CDS |
| GCTCAGAATGGTTCCTTTGG+AGG | 0.459647 | 8_2:-56357481 | Msa1256430:CDS |
| ATGAAAGTGATTGAATCATC+AGG | 0.467590 | 8_2:-56356980 | Msa1256430:CDS |
| ACAATATGGATCATTTCCTT+AGG | 0.471274 | 8_2:-56357315 | Msa1256430:CDS |
| CGATGGCTCAGGACCATTGA+AGG | 0.473301 | 8_2:-56357071 | Msa1256430:CDS |
| ACTGCCCAAGAAAGTGTTAA+CGG | 0.474271 | 8_2:-56357379 | Msa1256430:CDS |
| CGGTTTACTCTCACGAGCAT+TGG | 0.475082 | 8_2:-56357611 | Msa1256430:CDS |
| TTGATAACTTATCGAGAAAG+TGG | 0.478174 | 8_2:-56357540 | Msa1256430:CDS |
| GGCATCTGTTGTGACAAACT+TGG | 0.478279 | 8_2:+56357121 | None:intergenic |
| TTAGTTATATAACTGTCATC+TGG | 0.485112 | 8_2:+56357514 | None:intergenic |
| AATTATACTTTCTGTTATGG+TGG | 0.488094 | 8_2:-56356876 | Msa1256430:CDS |
| AATGACAGTGATCAACAATC+TGG | 0.497976 | 8_2:-56357202 | Msa1256430:CDS |
| AGTACCTAATACGTCGGTTG+AGG | 0.502642 | 8_2:-56357041 | Msa1256430:CDS |
| GGTACTACGCTAACCTTCAA+TGG | 0.503918 | 8_2:+56357058 | None:intergenic |
| TTTGAATTTGAATAATCTAA+GGG | 0.513434 | 8_2:+56356950 | None:intergenic |
| CTCGTTTACTAAAGGAGAGT+TGG | 0.515800 | 8_2:+56357810 | None:intergenic |
| AGTGGAAAGGTTAGTTGGTG+AGG | 0.524855 | 8_2:+56357897 | None:intergenic |
| AGAACTGAACCCACCGCCAC+GGG | 0.529345 | 8_2:+56356908 | None:intergenic |
| CTTCAATGGTCCTGAGCCAT+CGG | 0.534736 | 8_2:+56357072 | None:intergenic |
| AATGCGAATGATGATGTTTG+AGG | 0.558071 | 8_2:+56357742 | None:intergenic |
| GCATCTGTTGTGACAAACTT+GGG | 0.560194 | 8_2:+56357122 | None:intergenic |
| ATTAGTCTTCCCGTGGCGGT+GGG | 0.560341 | 8_2:-56356917 | Msa1256430:CDS |
| GTTTACTAAAGGAGAGTTGG+TGG | 0.569785 | 8_2:+56357813 | None:intergenic |
| AACCCACAAAACGCTCAGAA+TGG | 0.570988 | 8_2:-56357493 | Msa1256430:CDS |
| TGATCCATATTGTTCTCCAC+AGG | 0.576270 | 8_2:+56357325 | None:intergenic |
| CCAAATTCAACTATAGACAT+AGG | 0.580928 | 8_2:-56357421 | Msa1256430:CDS |
| TGAAACGTGCAATTGAATTG+GGG | 0.596760 | 8_2:+56357677 | None:intergenic |
| GCGGTGGGTTCAGTTCTTGG+AGG | 0.597295 | 8_2:-56356902 | Msa1256430:CDS |
| GCGTTTAATATCACCTCCAA+AGG | 0.601330 | 8_2:+56357468 | None:intergenic |
| CATAAGTTGGAGTGTTCCTG+TGG | 0.604966 | 8_2:-56357341 | Msa1256430:CDS |
| AAGAACTGAACCCACCGCCA+CGG | 0.614054 | 8_2:+56356907 | None:intergenic |
| GAAGATTAGTCTTCCCGTGG+CGG | 0.615717 | 8_2:-56356921 | Msa1256430:CDS |
| TTTCACCACCGATGTTAAGA+CGG | 0.619305 | 8_2:+56357578 | None:intergenic |
| TATGGTGGTTTCTCCACCGG+AGG | 0.625366 | 8_2:-56356861 | Msa1256430:CDS |
| GAATTGGGGATTAAATGACT+GGG | 0.629356 | 8_2:+56357691 | None:intergenic |
| GGCTTATCTACTTACAGTGG+CGG | 0.632917 | 8_2:-56357631 | Msa1256430:CDS |
| AATTGGGGATTAAATGACTG+GGG | 0.636780 | 8_2:+56357692 | None:intergenic |
| ACCAAACACCGTCTTAACAT+CGG | 0.638754 | 8_2:-56357586 | Msa1256430:CDS |
| GAAGAAGATTAGTCTTCCCG+TGG | 0.647884 | 8_2:-56356924 | Msa1256430:CDS |
| CAAGGCTTATCTACTTACAG+TGG | 0.669174 | 8_2:-56357634 | Msa1256430:CDS |
| TAGCGTAGTACCTAATACGT+CGG | 0.680013 | 8_2:-56357047 | Msa1256430:CDS |
| AAACACCGTCTTAACATCGG+TGG | 0.683836 | 8_2:-56357583 | Msa1256430:CDS |
| ACTGCACATGATGAATCTGA+TGG | 0.714361 | 8_2:-56357445 | Msa1256430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTATTTTGAATCTTTTT+CGG | + | chr8_2:56357005-56357024 | None:intergenic | 15.0% |
| !! | TTTGAATTTGAATAATCTAA+GGG | + | chr8_2:56357825-56357844 | None:intergenic | 15.0% |
| !! | ATTTGAATTTGAATAATCTA+AGG | + | chr8_2:56357826-56357845 | None:intergenic | 15.0% |
| !! | TTTAATTATACTTTCTGTTA+TGG | - | chr8_2:56357893-56357912 | Msa1256430:CDS | 15.0% |
| !!! | ATGTTATTTTGAATCTTTTT+CGG | + | chr8_2:56357005-56357024 | None:intergenic | 15.0% |
| !! | TTTGAATTTGAATAATCTAA+GGG | + | chr8_2:56357825-56357844 | None:intergenic | 15.0% |
| !! | ATTTGAATTTGAATAATCTA+AGG | + | chr8_2:56357826-56357845 | None:intergenic | 15.0% |
| !! | TTTAATTATACTTTCTGTTA+TGG | - | chr8_2:56357893-56357912 | Msa1256430:CDS | 15.0% |
| !! | ACCACAAAATCATAATAATA+AGG | + | chr8_2:56357675-56357694 | None:intergenic | 20.0% |
| !!! | AAACCAAATGCTTTTTTAAA+TGG | - | chr8_2:56357759-56357778 | Msa1256430:CDS | 20.0% |
| !!! | AACCAAATGCTTTTTTAAAT+GGG | - | chr8_2:56357760-56357779 | Msa1256430:CDS | 20.0% |
| !! | ACCACAAAATCATAATAATA+AGG | + | chr8_2:56357675-56357694 | None:intergenic | 20.0% |
| !!! | AAACCAAATGCTTTTTTAAA+TGG | - | chr8_2:56357759-56357778 | Msa1256430:CDS | 20.0% |
| !!! | AACCAAATGCTTTTTTAAAT+GGG | - | chr8_2:56357760-56357779 | Msa1256430:CDS | 20.0% |
| !!! | ATTTTTTAACAGAGAGAAAC+CGG | + | chr8_2:56356923-56356942 | None:intergenic | 25.0% |
| ! | ACAAAATACTCGTTTACTAA+AGG | + | chr8_2:56356973-56356992 | None:intergenic | 25.0% |
| ! | TTAGTTATATAACTGTCATC+TGG | + | chr8_2:56357261-56357280 | None:intergenic | 25.0% |
| ! | CAAAAGGTTTAAACATAAGT+TGG | - | chr8_2:56357418-56357437 | Msa1256430:CDS | 25.0% |
| ! | TATCATAAAAATCAAGCCTA+AGG | + | chr8_2:56357476-56357495 | None:intergenic | 25.0% |
| !!! | GCCTTATTATTATGATTTTG+TGG | - | chr8_2:56357671-56357690 | Msa1256430:CDS | 25.0% |
| ! | AATTATACTTTCTGTTATGG+TGG | - | chr8_2:56357896-56357915 | Msa1256430:CDS | 25.0% |
| !!! | ATTTTTTAACAGAGAGAAAC+CGG | + | chr8_2:56356923-56356942 | None:intergenic | 25.0% |
| ! | ACAAAATACTCGTTTACTAA+AGG | + | chr8_2:56356973-56356992 | None:intergenic | 25.0% |
| ! | TTAGTTATATAACTGTCATC+TGG | + | chr8_2:56357261-56357280 | None:intergenic | 25.0% |
| ! | CAAAAGGTTTAAACATAAGT+TGG | - | chr8_2:56357418-56357437 | Msa1256430:CDS | 25.0% |
| ! | TATCATAAAAATCAAGCCTA+AGG | + | chr8_2:56357476-56357495 | None:intergenic | 25.0% |
| !!! | GCCTTATTATTATGATTTTG+TGG | - | chr8_2:56357671-56357690 | Msa1256430:CDS | 25.0% |
| ! | AATTATACTTTCTGTTATGG+TGG | - | chr8_2:56357896-56357915 | Msa1256430:CDS | 25.0% |
| !!! | TTTTTTAACAGAGAGAAACC+GGG | + | chr8_2:56356922-56356941 | None:intergenic | 30.0% |
| TACAATAAATCTAGCGTTCA+AGG | - | chr8_2:56357120-56357139 | Msa1256430:CDS | 30.0% | |
| ! | TTGATAACTTATCGAGAAAG+TGG | - | chr8_2:56357232-56357251 | Msa1256430:CDS | 30.0% |
| CCTATGTCTATAGTTGAATT+TGG | + | chr8_2:56357354-56357373 | None:intergenic | 30.0% | |
| CCAAATTCAACTATAGACAT+AGG | - | chr8_2:56357351-56357370 | Msa1256430:CDS | 30.0% | |
| GCAGTTCTATAAACAATATC+TGG | + | chr8_2:56357378-56357397 | None:intergenic | 30.0% | |
| ACAATATGGATCATTTCCTT+AGG | - | chr8_2:56357457-56357476 | Msa1256430:CDS | 30.0% | |
| !!! | ATTTTTAGTGATCGACAATC+TGG | - | chr8_2:56357495-56357514 | Msa1256430:CDS | 30.0% |
| !! | AGCCCATTTAAAAAAGCATT+TGG | + | chr8_2:56357765-56357784 | None:intergenic | 30.0% |
| ATGAAAGTGATTGAATCATC+AGG | - | chr8_2:56357792-56357811 | Msa1256430:CDS | 30.0% | |
| !!! | TTTTTTAACAGAGAGAAACC+GGG | + | chr8_2:56356922-56356941 | None:intergenic | 30.0% |
| TACAATAAATCTAGCGTTCA+AGG | - | chr8_2:56357120-56357139 | Msa1256430:CDS | 30.0% | |
| ! | TTGATAACTTATCGAGAAAG+TGG | - | chr8_2:56357232-56357251 | Msa1256430:CDS | 30.0% |
| CCTATGTCTATAGTTGAATT+TGG | + | chr8_2:56357354-56357373 | None:intergenic | 30.0% | |
| CCAAATTCAACTATAGACAT+AGG | - | chr8_2:56357351-56357370 | Msa1256430:CDS | 30.0% | |
| GCAGTTCTATAAACAATATC+TGG | + | chr8_2:56357378-56357397 | None:intergenic | 30.0% | |
| ACAATATGGATCATTTCCTT+AGG | - | chr8_2:56357457-56357476 | Msa1256430:CDS | 30.0% | |
| !!! | ATTTTTAGTGATCGACAATC+TGG | - | chr8_2:56357495-56357514 | Msa1256430:CDS | 30.0% |
| !! | AGCCCATTTAAAAAAGCATT+TGG | + | chr8_2:56357765-56357784 | None:intergenic | 30.0% |
| ATGAAAGTGATTGAATCATC+AGG | - | chr8_2:56357792-56357811 | Msa1256430:CDS | 30.0% | |
| GTGAGGAGAATGAAAAGAAA+TGG | + | chr8_2:56356861-56356880 | None:intergenic | 35.0% | |
| ! | GAAAACGTTGAATTTTGCAG+TGG | + | chr8_2:56356896-56356915 | None:intergenic | 35.0% |
| ! | AAATTCAACGTTTTCGTTCC+CGG | - | chr8_2:56356901-56356920 | Msa1256430:CDS | 35.0% |
| ! | AATGCGAATGATGATGTTTG+AGG | + | chr8_2:56357033-56357052 | None:intergenic | 35.0% |
| AATTGGGGATTAAATGACTG+GGG | + | chr8_2:56357083-56357102 | None:intergenic | 35.0% | |
| GAATTGGGGATTAAATGACT+GGG | + | chr8_2:56357084-56357103 | None:intergenic | 35.0% | |
| TGAATTGGGGATTAAATGAC+TGG | + | chr8_2:56357085-56357104 | None:intergenic | 35.0% | |
| TGAAACGTGCAATTGAATTG+GGG | + | chr8_2:56357098-56357117 | None:intergenic | 35.0% | |
| GTGAAACGTGCAATTGAATT+GGG | + | chr8_2:56357099-56357118 | None:intergenic | 35.0% | |
| AGTGAAACGTGCAATTGAAT+TGG | + | chr8_2:56357100-56357119 | None:intergenic | 35.0% | |
| TGAACCGTTAACACTTTCTT+GGG | + | chr8_2:56357400-56357419 | None:intergenic | 35.0% | |
| TTGAACCGTTAACACTTTCT+TGG | + | chr8_2:56357401-56357420 | None:intergenic | 35.0% | |
| !! | GAAAGTGTTAACGGTTCAAA+AGG | - | chr8_2:56357402-56357421 | Msa1256430:CDS | 35.0% |
| AATGACAGTGATCAACAATC+TGG | - | chr8_2:56357570-56357589 | Msa1256430:CDS | 35.0% | |
| GTGAGGAGAATGAAAAGAAA+TGG | + | chr8_2:56356861-56356880 | None:intergenic | 35.0% | |
| ! | GAAAACGTTGAATTTTGCAG+TGG | + | chr8_2:56356896-56356915 | None:intergenic | 35.0% |
| ! | AAATTCAACGTTTTCGTTCC+CGG | - | chr8_2:56356901-56356920 | Msa1256430:CDS | 35.0% |
| ! | AATGCGAATGATGATGTTTG+AGG | + | chr8_2:56357033-56357052 | None:intergenic | 35.0% |
| AATTGGGGATTAAATGACTG+GGG | + | chr8_2:56357083-56357102 | None:intergenic | 35.0% | |
| GAATTGGGGATTAAATGACT+GGG | + | chr8_2:56357084-56357103 | None:intergenic | 35.0% | |
| TGAATTGGGGATTAAATGAC+TGG | + | chr8_2:56357085-56357104 | None:intergenic | 35.0% | |
| TGAAACGTGCAATTGAATTG+GGG | + | chr8_2:56357098-56357117 | None:intergenic | 35.0% | |
| GTGAAACGTGCAATTGAATT+GGG | + | chr8_2:56357099-56357118 | None:intergenic | 35.0% | |
| AGTGAAACGTGCAATTGAAT+TGG | + | chr8_2:56357100-56357119 | None:intergenic | 35.0% | |
| TGAACCGTTAACACTTTCTT+GGG | + | chr8_2:56357400-56357419 | None:intergenic | 35.0% | |
| TTGAACCGTTAACACTTTCT+TGG | + | chr8_2:56357401-56357420 | None:intergenic | 35.0% | |
| !! | GAAAGTGTTAACGGTTCAAA+AGG | - | chr8_2:56357402-56357421 | Msa1256430:CDS | 35.0% |
| AATGACAGTGATCAACAATC+TGG | - | chr8_2:56357570-56357589 | Msa1256430:CDS | 35.0% | |
| TTTGCAGTGGAAAGGTTAGT+TGG | + | chr8_2:56356883-56356902 | None:intergenic | 40.0% | |
| ! | CGTTGAATTTTGCAGTGGAA+AGG | + | chr8_2:56356891-56356910 | None:intergenic | 40.0% |
| GTTTACTAAAGGAGAGTTGG+TGG | + | chr8_2:56356962-56356981 | None:intergenic | 40.0% | |
| CTCGTTTACTAAAGGAGAGT+TGG | + | chr8_2:56356965-56356984 | None:intergenic | 40.0% | |
| CAAGGCTTATCTACTTACAG+TGG | - | chr8_2:56357138-56357157 | Msa1256430:CDS | 40.0% | |
| ACCAAACACCGTCTTAACAT+CGG | - | chr8_2:56357186-56357205 | Msa1256430:CDS | 40.0% | |
| TTTCACCACCGATGTTAAGA+CGG | + | chr8_2:56357197-56357216 | None:intergenic | 40.0% | |
| ! | AACCATTCTGAGCGTTTTGT+GGG | + | chr8_2:56357284-56357303 | None:intergenic | 40.0% |
| GCGTTTAATATCACCTCCAA+AGG | + | chr8_2:56357307-56357326 | None:intergenic | 40.0% | |
| ACTGCACATGATGAATCTGA+TGG | - | chr8_2:56357327-56357346 | Msa1256430:CDS | 40.0% | |
| !! | ACTGCCCAAGAAAGTGTTAA+CGG | - | chr8_2:56357393-56357412 | Msa1256430:CDS | 40.0% |
| TGTTCCTGTGGAGAACAATA+TGG | - | chr8_2:56357443-56357462 | Msa1256430:CDS | 40.0% | |
| TGATCCATATTGTTCTCCAC+AGG | + | chr8_2:56357450-56357469 | None:intergenic | 40.0% | |
| GCATCTGTTGTGACAAACTT+GGG | + | chr8_2:56357653-56357672 | None:intergenic | 40.0% | |
| TAGCGTAGTACCTAATACGT+CGG | - | chr8_2:56357725-56357744 | Msa1256430:CDS | 40.0% | |
| TAAAAAAATAGCTCCTCCGG+TGG | + | chr8_2:56357927-56357946 | None:intergenic | 40.0% | |
| TTTGCAGTGGAAAGGTTAGT+TGG | + | chr8_2:56356883-56356902 | None:intergenic | 40.0% | |
| ! | CGTTGAATTTTGCAGTGGAA+AGG | + | chr8_2:56356891-56356910 | None:intergenic | 40.0% |
| GTTTACTAAAGGAGAGTTGG+TGG | + | chr8_2:56356962-56356981 | None:intergenic | 40.0% | |
| CTCGTTTACTAAAGGAGAGT+TGG | + | chr8_2:56356965-56356984 | None:intergenic | 40.0% | |
| CAAGGCTTATCTACTTACAG+TGG | - | chr8_2:56357138-56357157 | Msa1256430:CDS | 40.0% | |
| ACCAAACACCGTCTTAACAT+CGG | - | chr8_2:56357186-56357205 | Msa1256430:CDS | 40.0% | |
| TTTCACCACCGATGTTAAGA+CGG | + | chr8_2:56357197-56357216 | None:intergenic | 40.0% | |
| ! | AACCATTCTGAGCGTTTTGT+GGG | + | chr8_2:56357284-56357303 | None:intergenic | 40.0% |
| GCGTTTAATATCACCTCCAA+AGG | + | chr8_2:56357307-56357326 | None:intergenic | 40.0% | |
| ACTGCACATGATGAATCTGA+TGG | - | chr8_2:56357327-56357346 | Msa1256430:CDS | 40.0% | |
| !! | ACTGCCCAAGAAAGTGTTAA+CGG | - | chr8_2:56357393-56357412 | Msa1256430:CDS | 40.0% |
| TGTTCCTGTGGAGAACAATA+TGG | - | chr8_2:56357443-56357462 | Msa1256430:CDS | 40.0% | |
| TGATCCATATTGTTCTCCAC+AGG | + | chr8_2:56357450-56357469 | None:intergenic | 40.0% | |
| GCATCTGTTGTGACAAACTT+GGG | + | chr8_2:56357653-56357672 | None:intergenic | 40.0% | |
| TAGCGTAGTACCTAATACGT+CGG | - | chr8_2:56357725-56357744 | Msa1256430:CDS | 40.0% | |
| TAAAAAAATAGCTCCTCCGG+TGG | + | chr8_2:56357927-56357946 | None:intergenic | 40.0% | |
| ! | AGTGGAAAGGTTAGTTGGTG+AGG | + | chr8_2:56356878-56356897 | None:intergenic | 45.0% |
| GGCTTATCTACTTACAGTGG+CGG | - | chr8_2:56357141-56357160 | Msa1256430:CDS | 45.0% | |
| ACCGATGTTAAGACGGTGTT+TGG | + | chr8_2:56357190-56357209 | None:intergenic | 45.0% | |
| AAACACCGTCTTAACATCGG+TGG | - | chr8_2:56357189-56357208 | Msa1256430:CDS | 45.0% | |
| AACCCACAAAACGCTCAGAA+TGG | - | chr8_2:56357279-56357298 | Msa1256430:CDS | 45.0% | |
| ! | GAACCATTCTGAGCGTTTTG+TGG | + | chr8_2:56357285-56357304 | None:intergenic | 45.0% |
| AACGCTCAGAATGGTTCCTT+TGG | - | chr8_2:56357288-56357307 | Msa1256430:CDS | 45.0% | |
| ! | CATAAGTTGGAGTGTTCCTG+TGG | - | chr8_2:56357431-56357450 | Msa1256430:CDS | 45.0% |
| GGCATCTGTTGTGACAAACT+TGG | + | chr8_2:56357654-56357673 | None:intergenic | 45.0% | |
| ! | GATTTTGTGGTTCGTTCCGA+TGG | - | chr8_2:56357684-56357703 | Msa1256430:CDS | 45.0% |
| GGTACTACGCTAACCTTCAA+TGG | + | chr8_2:56357717-56357736 | None:intergenic | 45.0% | |
| ! | AGTACCTAATACGTCGGTTG+AGG | - | chr8_2:56357731-56357750 | Msa1256430:CDS | 45.0% |
| !! | GAAGAAGATTAGTCTTCCCG+TGG | - | chr8_2:56357848-56357867 | Msa1256430:CDS | 45.0% |
| TGTTATGGTGGTTTCTCCAC+CGG | - | chr8_2:56357908-56357927 | Msa1256430:CDS | 45.0% | |
| ! | AGTGGAAAGGTTAGTTGGTG+AGG | + | chr8_2:56356878-56356897 | None:intergenic | 45.0% |
| GGCTTATCTACTTACAGTGG+CGG | - | chr8_2:56357141-56357160 | Msa1256430:CDS | 45.0% | |
| ACCGATGTTAAGACGGTGTT+TGG | + | chr8_2:56357190-56357209 | None:intergenic | 45.0% | |
| AAACACCGTCTTAACATCGG+TGG | - | chr8_2:56357189-56357208 | Msa1256430:CDS | 45.0% | |
| AACCCACAAAACGCTCAGAA+TGG | - | chr8_2:56357279-56357298 | Msa1256430:CDS | 45.0% | |
| ! | GAACCATTCTGAGCGTTTTG+TGG | + | chr8_2:56357285-56357304 | None:intergenic | 45.0% |
| AACGCTCAGAATGGTTCCTT+TGG | - | chr8_2:56357288-56357307 | Msa1256430:CDS | 45.0% | |
| ! | CATAAGTTGGAGTGTTCCTG+TGG | - | chr8_2:56357431-56357450 | Msa1256430:CDS | 45.0% |
| GGCATCTGTTGTGACAAACT+TGG | + | chr8_2:56357654-56357673 | None:intergenic | 45.0% | |
| ! | GATTTTGTGGTTCGTTCCGA+TGG | - | chr8_2:56357684-56357703 | Msa1256430:CDS | 45.0% |
| GGTACTACGCTAACCTTCAA+TGG | + | chr8_2:56357717-56357736 | None:intergenic | 45.0% | |
| ! | AGTACCTAATACGTCGGTTG+AGG | - | chr8_2:56357731-56357750 | Msa1256430:CDS | 45.0% |
| !! | GAAGAAGATTAGTCTTCCCG+TGG | - | chr8_2:56357848-56357867 | Msa1256430:CDS | 45.0% |
| TGTTATGGTGGTTTCTCCAC+CGG | - | chr8_2:56357908-56357927 | Msa1256430:CDS | 45.0% | |
| CGGTTTACTCTCACGAGCAT+TGG | - | chr8_2:56357161-56357180 | Msa1256430:CDS | 50.0% | |
| GCTCAGAATGGTTCCTTTGG+AGG | - | chr8_2:56357291-56357310 | Msa1256430:CDS | 50.0% | |
| CTTCAATGGTCCTGAGCCAT+CGG | + | chr8_2:56357703-56357722 | None:intergenic | 50.0% | |
| GCAACCTCAACCGACGTATT+AGG | + | chr8_2:56357738-56357757 | None:intergenic | 50.0% | |
| !! | GAAGATTAGTCTTCCCGTGG+CGG | - | chr8_2:56357851-56357870 | Msa1256430:CDS | 50.0% |
| CGGTTTACTCTCACGAGCAT+TGG | - | chr8_2:56357161-56357180 | Msa1256430:CDS | 50.0% | |
| GCTCAGAATGGTTCCTTTGG+AGG | - | chr8_2:56357291-56357310 | Msa1256430:CDS | 50.0% | |
| CTTCAATGGTCCTGAGCCAT+CGG | + | chr8_2:56357703-56357722 | None:intergenic | 50.0% | |
| GCAACCTCAACCGACGTATT+AGG | + | chr8_2:56357738-56357757 | None:intergenic | 50.0% | |
| !! | GAAGATTAGTCTTCCCGTGG+CGG | - | chr8_2:56357851-56357870 | Msa1256430:CDS | 50.0% |
| CGATGGCTCAGGACCATTGA+AGG | - | chr8_2:56357701-56357720 | Msa1256430:CDS | 55.0% | |
| !! | ATTAGTCTTCCCGTGGCGGT+GGG | - | chr8_2:56357855-56357874 | Msa1256430:CDS | 55.0% |
| AAGAACTGAACCCACCGCCA+CGG | + | chr8_2:56357868-56357887 | None:intergenic | 55.0% | |
| TATGGTGGTTTCTCCACCGG+AGG | - | chr8_2:56357911-56357930 | Msa1256430:CDS | 55.0% | |
| CGATGGCTCAGGACCATTGA+AGG | - | chr8_2:56357701-56357720 | Msa1256430:CDS | 55.0% | |
| !! | ATTAGTCTTCCCGTGGCGGT+GGG | - | chr8_2:56357855-56357874 | Msa1256430:CDS | 55.0% |
| AAGAACTGAACCCACCGCCA+CGG | + | chr8_2:56357868-56357887 | None:intergenic | 55.0% | |
| TATGGTGGTTTCTCCACCGG+AGG | - | chr8_2:56357911-56357930 | Msa1256430:CDS | 55.0% | |
| GTGGTTCGTTCCGATGGCTC+AGG | - | chr8_2:56357690-56357709 | Msa1256430:CDS | 60.0% | |
| !! | GATTAGTCTTCCCGTGGCGG+TGG | - | chr8_2:56357854-56357873 | Msa1256430:CDS | 60.0% |
| AGAACTGAACCCACCGCCAC+GGG | + | chr8_2:56357867-56357886 | None:intergenic | 60.0% | |
| ! | GTGGCGGTGGGTTCAGTTCT+TGG | - | chr8_2:56357867-56357886 | Msa1256430:CDS | 60.0% |
| ! | GCGGTGGGTTCAGTTCTTGG+AGG | - | chr8_2:56357870-56357889 | Msa1256430:CDS | 60.0% |
| GTGGTTCGTTCCGATGGCTC+AGG | - | chr8_2:56357690-56357709 | Msa1256430:CDS | 60.0% | |
| !! | GATTAGTCTTCCCGTGGCGG+TGG | - | chr8_2:56357854-56357873 | Msa1256430:CDS | 60.0% |
| AGAACTGAACCCACCGCCAC+GGG | + | chr8_2:56357867-56357886 | None:intergenic | 60.0% | |
| ! | GTGGCGGTGGGTTCAGTTCT+TGG | - | chr8_2:56357867-56357886 | Msa1256430:CDS | 60.0% |
| ! | GCGGTGGGTTCAGTTCTTGG+AGG | - | chr8_2:56357870-56357889 | Msa1256430:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 56356847 | 56357947 | 56356847 | ID=Msa1256430;Name=Msa1256430 |
| chr8_2 | mRNA | 56356847 | 56357947 | 56356847 | ID=Msa1256430-mRNA-1;Parent=Msa1256430;Name=Msa1256430-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|366 |
| chr8_2 | exon | 56356847 | 56357947 | 56356847 | ID=Msa1256430-mRNA-1:exon:17395;Parent=Msa1256430-mRNA-1 |
| chr8_2 | CDS | 56356847 | 56357947 | 56356847 | ID=Msa1256430-mRNA-1:cds;Parent=Msa1256430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
