Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0884300 | XP_013458000.1 | 94.872 | 390 | 19 | 1 | 2 | 391 | 3 | 391 | 0.0 | 767 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0884300 | sp|Q9C907|GDPD5_ARATH | 71.907 | 388 | 107 | 2 | 4 | 390 | 3 | 389 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0884300 | A0A072URQ0 | 94.872 | 390 | 19 | 1 | 2 | 391 | 3 | 391 | 0.0 | 767 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0884300 | 0.817425 | 3.319613e-52 | -8.615850e-47 |
| Msa0006050 | Msa0884300 | 0.824867 | 6.394642e-54 | -8.615850e-47 |
| Msa0020320 | Msa0884300 | 0.803849 | 2.863826e-49 | -8.615850e-47 |
| Msa0028950 | Msa0884300 | 0.804016 | 2.645065e-49 | -8.615850e-47 |
| Msa0039590 | Msa0884300 | 0.821395 | 4.131854e-53 | -8.615850e-47 |
| Msa0044320 | Msa0884300 | 0.809700 | 1.662284e-50 | -8.615850e-47 |
| Msa0045530 | Msa0884300 | 0.813666 | 2.280320e-51 | -8.615850e-47 |
| Msa0053960 | Msa0884300 | 0.815241 | 1.022730e-51 | -8.615850e-47 |
| Msa0054760 | Msa0884300 | 0.809202 | 2.126193e-50 | -8.615850e-47 |
| Msa0056130 | Msa0884300 | 0.812397 | 4.327094e-51 | -8.615850e-47 |
| Msa0056160 | Msa0884300 | 0.822257 | 2.609733e-53 | -8.615850e-47 |
| Msa0072710 | Msa0884300 | 0.813674 | 2.270878e-51 | -8.615850e-47 |
| Msa0083550 | Msa0884300 | 0.801689 | 7.996678e-49 | -8.615850e-47 |
| Msa0089010 | Msa0884300 | 0.828516 | 8.610518e-55 | -8.615850e-47 |
| Msa0092390 | Msa0884300 | 0.820913 | 5.334432e-53 | -8.615850e-47 |
| Msa0094670 | Msa0884300 | 0.806347 | 8.598400e-50 | -8.615850e-47 |
| Msa0114960 | Msa0884300 | 0.809525 | 1.812513e-50 | -8.615850e-47 |
| Msa0605470 | Msa0884300 | -0.822889 | 1.860846e-53 | -8.615850e-47 |
| Msa0612880 | Msa0884300 | 0.805078 | 1.587649e-49 | -8.615850e-47 |
| Msa0615430 | Msa0884300 | 0.826699 | 2.351017e-54 | -8.615850e-47 |
| Msa0618260 | Msa0884300 | 0.803705 | 3.067972e-49 | -8.615850e-47 |
| Msa0619390 | Msa0884300 | 0.822400 | 2.417728e-53 | -8.615850e-47 |
| Msa0619690 | Msa0884300 | 0.819971 | 8.773019e-53 | -8.615850e-47 |
| Msa0623980 | Msa0884300 | -0.803090 | 4.114404e-49 | -8.615850e-47 |
| Msa0625820 | Msa0884300 | 0.822080 | 2.867456e-53 | -8.615850e-47 |
| Msa0625850 | Msa0884300 | 0.822273 | 2.586918e-53 | -8.615850e-47 |
| Msa0627050 | Msa0884300 | 0.810017 | 1.420932e-50 | -8.615850e-47 |
| Msa0629980 | Msa0884300 | 0.804527 | 2.069402e-49 | -8.615850e-47 |
| Msa0639880 | Msa0884300 | 0.847181 | 1.360618e-59 | -8.615850e-47 |
| Msa0644610 | Msa0884300 | 0.804053 | 2.597783e-49 | -8.615850e-47 |
| Msa0654880 | Msa0884300 | 0.829814 | 4.168944e-55 | -8.615850e-47 |
| Msa0657820 | Msa0884300 | 0.812263 | 4.630060e-51 | -8.615850e-47 |
| Msa0657860 | Msa0884300 | 0.805300 | 1.426517e-49 | -8.615850e-47 |
| Msa0658280 | Msa0884300 | 0.811695 | 6.157167e-51 | -8.615850e-47 |
| Msa0659520 | Msa0884300 | 0.810971 | 8.838894e-51 | -8.615850e-47 |
| Msa0662670 | Msa0884300 | 0.806837 | 6.775965e-50 | -8.615850e-47 |
| Msa0663630 | Msa0884300 | 0.816173 | 6.338547e-52 | -8.615850e-47 |
| Msa0675010 | Msa0884300 | 0.810918 | 9.078082e-51 | -8.615850e-47 |
| Msa0677590 | Msa0884300 | 0.809025 | 2.320064e-50 | -8.615850e-47 |
| Msa0681190 | Msa0884300 | 0.805315 | 1.416514e-49 | -8.615850e-47 |
| Msa0693400 | Msa0884300 | 0.811878 | 5.616818e-51 | -8.615850e-47 |
| Msa0698480 | Msa0884300 | 0.825660 | 4.153699e-54 | -8.615850e-47 |
| Msa0698650 | Msa0884300 | 0.828117 | 1.074466e-54 | -8.615850e-47 |
| Msa0702200 | Msa0884300 | 0.804228 | 2.388776e-49 | -8.615850e-47 |
| Msa0703820 | Msa0884300 | 0.805238 | 1.470420e-49 | -8.615850e-47 |
| Msa0706130 | Msa0884300 | 0.805853 | 1.092039e-49 | -8.615850e-47 |
| Msa0707270 | Msa0884300 | 0.809748 | 1.623020e-50 | -8.615850e-47 |
| Msa0708870 | Msa0884300 | 0.805981 | 1.026592e-49 | -8.615850e-47 |
| Msa0712500 | Msa0884300 | 0.805871 | 1.082956e-49 | -8.615850e-47 |
| Msa0718920 | Msa0884300 | 0.822253 | 2.614489e-53 | -8.615850e-47 |
| Msa0719160 | Msa0884300 | 0.816850 | 4.469779e-52 | -8.615850e-47 |
| Msa0726000 | Msa0884300 | 0.830141 | 3.470227e-55 | -8.615850e-47 |
| Msa0744690 | Msa0884300 | 0.820924 | 5.303868e-53 | -8.615850e-47 |
| Msa0749150 | Msa0884300 | 0.802051 | 6.737898e-49 | -8.615850e-47 |
| Msa0752540 | Msa0884300 | 0.810686 | 1.018681e-50 | -8.615850e-47 |
| Msa0752830 | Msa0884300 | 0.808465 | 3.056615e-50 | -8.615850e-47 |
| Msa0760730 | Msa0884300 | 0.828753 | 7.544262e-55 | -8.615850e-47 |
| Msa0766030 | Msa0884300 | 0.805987 | 1.023462e-49 | -8.615850e-47 |
| Msa0766540 | Msa0884300 | 0.807003 | 6.249617e-50 | -8.615850e-47 |
| Msa0781030 | Msa0884300 | 0.823162 | 1.607000e-53 | -8.615850e-47 |
| Msa0797010 | Msa0884300 | 0.810157 | 1.324987e-50 | -8.615850e-47 |
| Msa0802270 | Msa0884300 | 0.822769 | 1.984020e-53 | -8.615850e-47 |
| Msa0813030 | Msa0884300 | 0.831757 | 1.393215e-55 | -8.615850e-47 |
| Msa0821030 | Msa0884300 | 0.838858 | 2.240276e-57 | -8.615850e-47 |
| Msa0828900 | Msa0884300 | 0.800585 | 1.345173e-48 | -8.615850e-47 |
| Msa0829430 | Msa0884300 | 0.806958 | 6.387240e-50 | -8.615850e-47 |
| Msa0829570 | Msa0884300 | 0.807991 | 3.857068e-50 | -8.615850e-47 |
| Msa0831460 | Msa0884300 | 0.800737 | 1.252450e-48 | -8.615850e-47 |
| Msa0840450 | Msa0884300 | 0.812612 | 3.883531e-51 | -8.615850e-47 |
| Msa0842050 | Msa0884300 | 0.821979 | 3.027211e-53 | -8.615850e-47 |
| Msa0127210 | Msa0884300 | 0.824380 | 8.327341e-54 | -8.615850e-47 |
| Msa0135400 | Msa0884300 | 0.815681 | 8.162443e-52 | -8.615850e-47 |
| Msa0139280 | Msa0884300 | 0.804879 | 1.747726e-49 | -8.615850e-47 |
| Msa0147540 | Msa0884300 | 0.807082 | 6.012955e-50 | -8.615850e-47 |
| Msa0147800 | Msa0884300 | 0.820188 | 7.827530e-53 | -8.615850e-47 |
| Msa0163530 | Msa0884300 | 0.801458 | 8.918789e-49 | -8.615850e-47 |
| Msa0164630 | Msa0884300 | 0.803564 | 3.282645e-49 | -8.615850e-47 |
| Msa0190400 | Msa0884300 | 0.805204 | 1.494478e-49 | -8.615850e-47 |
| Msa0199740 | Msa0884300 | 0.812801 | 3.530981e-51 | -8.615850e-47 |
| Msa0202150 | Msa0884300 | 0.817857 | 2.652595e-52 | -8.615850e-47 |
| Msa0207150 | Msa0884300 | 0.806128 | 9.558713e-50 | -8.615850e-47 |
| Msa0209590 | Msa0884300 | 0.802038 | 6.780506e-49 | -8.615850e-47 |
| Msa0224980 | Msa0884300 | 0.806727 | 7.148752e-50 | -8.615850e-47 |
| Msa0225030 | Msa0884300 | 0.807182 | 5.725907e-50 | -8.615850e-47 |
| Msa0365350 | Msa0884300 | 0.811396 | 7.148929e-51 | -8.615850e-47 |
| Msa0365360 | Msa0884300 | 0.801167 | 1.022991e-48 | -8.615850e-47 |
| Msa0367310 | Msa0884300 | 0.817641 | 2.967794e-52 | -8.615850e-47 |
| Msa0370690 | Msa0884300 | 0.818924 | 1.520387e-52 | -8.615850e-47 |
| Msa0371640 | Msa0884300 | 0.815152 | 1.070426e-51 | -8.615850e-47 |
| Msa0371870 | Msa0884300 | 0.801681 | 8.028621e-49 | -8.615850e-47 |
| Msa0387970 | Msa0884300 | 0.806251 | 9.006206e-50 | -8.615850e-47 |
| Msa0388000 | Msa0884300 | 0.804029 | 2.627831e-49 | -8.615850e-47 |
| Msa0404900 | Msa0884300 | 0.822262 | 2.602692e-53 | -8.615850e-47 |
| Msa0409000 | Msa0884300 | 0.807752 | 4.335559e-50 | -8.615850e-47 |
| Msa0411260 | Msa0884300 | 0.802178 | 6.347228e-49 | -8.615850e-47 |
| Msa0414990 | Msa0884300 | 0.817357 | 3.439263e-52 | -8.615850e-47 |
| Msa0420100 | Msa0884300 | 0.808180 | 3.515144e-50 | -8.615850e-47 |
| Msa0425320 | Msa0884300 | 0.804512 | 2.084467e-49 | -8.615850e-47 |
| Msa0431310 | Msa0884300 | 0.801642 | 8.177569e-49 | -8.615850e-47 |
| Msa0440090 | Msa0884300 | 0.820979 | 5.152709e-53 | -8.615850e-47 |
| Msa0447820 | Msa0884300 | 0.822565 | 2.212799e-53 | -8.615850e-47 |
| Msa0450230 | Msa0884300 | 0.816770 | 4.659183e-52 | -8.615850e-47 |
| Msa0450920 | Msa0884300 | 0.807915 | 4.002669e-50 | -8.615850e-47 |
| Msa0452010 | Msa0884300 | 0.829690 | 4.469263e-55 | -8.615850e-47 |
| Msa0452120 | Msa0884300 | 0.812963 | 3.254410e-51 | -8.615850e-47 |
| Msa0452180 | Msa0884300 | 0.832577 | 8.731331e-56 | -8.615850e-47 |
| Msa0457380 | Msa0884300 | 0.812346 | 4.440448e-51 | -8.615850e-47 |
| Msa0466070 | Msa0884300 | 0.808669 | 2.764903e-50 | -8.615850e-47 |
| Msa0466340 | Msa0884300 | 0.803291 | 3.738581e-49 | -8.615850e-47 |
| Msa0470650 | Msa0884300 | 0.829553 | 4.827016e-55 | -8.615850e-47 |
| Msa0471130 | Msa0884300 | 0.806564 | 7.736322e-50 | -8.615850e-47 |
| Msa0471760 | Msa0884300 | 0.817120 | 3.888606e-52 | -8.615850e-47 |
| Msa0475740 | Msa0884300 | 0.821917 | 3.129080e-53 | -8.615850e-47 |
| Msa0476490 | Msa0884300 | 0.816673 | 4.898605e-52 | -8.615850e-47 |
| Msa0249670 | Msa0884300 | 0.800510 | 1.393200e-48 | -8.615850e-47 |
| Msa0272420 | Msa0884300 | 0.816819 | 4.542932e-52 | -8.615850e-47 |
| Msa0272570 | Msa0884300 | 0.815698 | 8.092009e-52 | -8.615850e-47 |
| Msa0274890 | Msa0884300 | 0.821528 | 3.848201e-53 | -8.615850e-47 |
| Msa0279910 | Msa0884300 | 0.812717 | 3.683400e-51 | -8.615850e-47 |
| Msa0304020 | Msa0884300 | 0.806053 | 9.912240e-50 | -8.615850e-47 |
| Msa0305810 | Msa0884300 | 0.803753 | 2.998996e-49 | -8.615850e-47 |
| Msa0305860 | Msa0884300 | 0.840956 | 6.362774e-58 | -8.615850e-47 |
| Msa0311330 | Msa0884300 | 0.808163 | 3.544748e-50 | -8.615850e-47 |
| Msa0312570 | Msa0884300 | 0.806834 | 6.786424e-50 | -8.615850e-47 |
| Msa0315010 | Msa0884300 | 0.804009 | 2.652840e-49 | -8.615850e-47 |
| Msa0319710 | Msa0884300 | 0.811533 | 6.674899e-51 | -8.615850e-47 |
| Msa0327870 | Msa0884300 | 0.802722 | 4.901332e-49 | -8.615850e-47 |
| Msa0330770 | Msa0884300 | 0.809107 | 2.228406e-50 | -8.615850e-47 |
| Msa0331830 | Msa0884300 | 0.823847 | 1.111002e-53 | -8.615850e-47 |
| Msa0341710 | Msa0884300 | 0.800920 | 1.149140e-48 | -8.615850e-47 |
| Msa0341770 | Msa0884300 | 0.835189 | 1.939663e-56 | -8.615850e-47 |
| Msa0343370 | Msa0884300 | 0.804154 | 2.475590e-49 | -8.615850e-47 |
| Msa0361500 | Msa0884300 | 0.822424 | 2.386542e-53 | -8.615850e-47 |
| Msa0485210 | Msa0884300 | 0.815296 | 9.943423e-52 | -8.615850e-47 |
| Msa0486870 | Msa0884300 | 0.803117 | 4.062776e-49 | -8.615850e-47 |
| Msa0501920 | Msa0884300 | 0.826553 | 2.546254e-54 | -8.615850e-47 |
| Msa0504630 | Msa0884300 | 0.816412 | 5.605150e-52 | -8.615850e-47 |
| Msa0504640 | Msa0884300 | 0.810053 | 1.395200e-50 | -8.615850e-47 |
| Msa0511040 | Msa0884300 | 0.814222 | 1.719474e-51 | -8.615850e-47 |
| Msa0511930 | Msa0884300 | 0.820779 | 5.726237e-53 | -8.615850e-47 |
| Msa0515460 | Msa0884300 | 0.815963 | 7.060780e-52 | -8.615850e-47 |
| Msa0515830 | Msa0884300 | 0.806467 | 8.111522e-50 | -8.615850e-47 |
| Msa0517460 | Msa0884300 | 0.816445 | 5.511104e-52 | -8.615850e-47 |
| Msa0528170 | Msa0884300 | 0.801091 | 1.060535e-48 | -8.615850e-47 |
| Msa0530340 | Msa0884300 | 0.803556 | 3.294415e-49 | -8.615850e-47 |
| Msa0533140 | Msa0884300 | 0.803013 | 4.269631e-49 | -8.615850e-47 |
| Msa0533270 | Msa0884300 | 0.802835 | 4.645272e-49 | -8.615850e-47 |
| Msa0538100 | Msa0884300 | 0.824666 | 7.132810e-54 | -8.615850e-47 |
| Msa0539900 | Msa0884300 | 0.807281 | 5.458368e-50 | -8.615850e-47 |
| Msa0548210 | Msa0884300 | 0.802432 | 5.626198e-49 | -8.615850e-47 |
| Msa0548230 | Msa0884300 | 0.813415 | 2.589586e-51 | -8.615850e-47 |
| Msa0556070 | Msa0884300 | 0.819646 | 1.040981e-52 | -8.615850e-47 |
| Msa0559890 | Msa0884300 | 0.815363 | 9.607672e-52 | -8.615850e-47 |
| Msa0561420 | Msa0884300 | 0.831510 | 1.602902e-55 | -8.615850e-47 |
| Msa0562680 | Msa0884300 | 0.800529 | 1.380666e-48 | -8.615850e-47 |
| Msa0565150 | Msa0884300 | 0.807422 | 5.093976e-50 | -8.615850e-47 |
| Msa0565930 | Msa0884300 | 0.810357 | 1.199995e-50 | -8.615850e-47 |
| Msa0566010 | Msa0884300 | 0.806620 | 7.530674e-50 | -8.615850e-47 |
| Msa0568600 | Msa0884300 | 0.819060 | 1.415774e-52 | -8.615850e-47 |
| Msa0568810 | Msa0884300 | 0.800609 | 1.330042e-48 | -8.615850e-47 |
| Msa0569930 | Msa0884300 | 0.811233 | 7.755566e-51 | -8.615850e-47 |
| Msa0575460 | Msa0884300 | 0.818124 | 2.308452e-52 | -8.615850e-47 |
| Msa0577050 | Msa0884300 | 0.835556 | 1.566503e-56 | -8.615850e-47 |
| Msa0585770 | Msa0884300 | 0.824069 | 9.852912e-54 | -8.615850e-47 |
| Msa0585810 | Msa0884300 | 0.800057 | 1.722567e-48 | -8.615850e-47 |
| Msa0598680 | Msa0884300 | 0.813986 | 1.938856e-51 | -8.615850e-47 |
| Msa0599250 | Msa0884300 | 0.842881 | 1.971754e-58 | -8.615850e-47 |
| Msa0846180 | Msa0884300 | 0.832684 | 8.215055e-56 | -8.615850e-47 |
| Msa0853500 | Msa0884300 | 0.833209 | 6.082626e-56 | -8.615850e-47 |
| Msa0861400 | Msa0884300 | 0.807622 | 4.620228e-50 | -8.615850e-47 |
| Msa0871470 | Msa0884300 | 0.816416 | 5.593854e-52 | -8.615850e-47 |
| Msa0880310 | Msa0884300 | 0.803602 | 3.223146e-49 | -8.615850e-47 |
| Msa0884300 | Msa0888900 | 0.818091 | 2.349070e-52 | -8.615850e-47 |
| Msa0884300 | Msa0902810 | 0.819137 | 1.359898e-52 | -8.615850e-47 |
| Msa0884300 | Msa0904630 | 0.813832 | 2.095992e-51 | -8.615850e-47 |
| Msa0884300 | Msa0906150 | 0.807533 | 4.825770e-50 | -8.615850e-47 |
| Msa0884300 | Msa0906840 | 0.833759 | 4.433653e-56 | -8.615850e-47 |
| Msa0884300 | Msa0911910 | 0.914856 | 1.172140e-84 | -8.615850e-47 |
| Msa0884300 | Msa0917630 | 0.812018 | 5.235268e-51 | -8.615850e-47 |
| Msa0884300 | Msa0927830 | 0.802371 | 5.790779e-49 | -8.615850e-47 |
| Msa0884300 | Msa0936650 | 0.802859 | 4.593130e-49 | -8.615850e-47 |
| Msa0884300 | Msa0949550 | 0.909306 | 6.587902e-82 | -8.615850e-47 |
| Msa0884300 | Msa0964150 | 0.831093 | 2.028752e-55 | -8.615850e-47 |
| Msa0884300 | Msa0976000 | 0.820753 | 5.807428e-53 | -8.615850e-47 |
| Msa0884300 | Msa0980980 | 0.809917 | 1.492555e-50 | -8.615850e-47 |
| Msa0884300 | Msa0982120 | 0.826685 | 2.368961e-54 | -8.615850e-47 |
| Msa0884300 | Msa1009150 | 0.819370 | 1.203396e-52 | -8.615850e-47 |
| Msa0884300 | Msa1009240 | 0.800639 | 1.311171e-48 | -8.615850e-47 |
| Msa0884300 | Msa1014350 | 0.808753 | 2.653065e-50 | -8.615850e-47 |
| Msa0884300 | Msa1015020 | 0.808185 | 3.506053e-50 | -8.615850e-47 |
| Msa0884300 | Msa1022660 | 0.810616 | 1.054978e-50 | -8.615850e-47 |
| Msa0884300 | Msa1026610 | 0.800644 | 1.308554e-48 | -8.615850e-47 |
| Msa0884300 | Msa1028210 | 0.805819 | 1.110250e-49 | -8.615850e-47 |
| Msa0884300 | Msa1031620 | 0.808152 | 3.564208e-50 | -8.615850e-47 |
| Msa0884300 | Msa1047700 | 0.817781 | 2.759426e-52 | -8.615850e-47 |
| Msa0884300 | Msa1050540 | 0.802553 | 5.313152e-49 | -8.615850e-47 |
| Msa0884300 | Msa1055490 | 0.804612 | 1.986805e-49 | -8.615850e-47 |
| Msa0884300 | Msa1061130 | 0.803987 | 2.681575e-49 | -8.615850e-47 |
| Msa0884300 | Msa1066930 | 0.804247 | 2.367305e-49 | -8.615850e-47 |
| Msa0884300 | Msa1067910 | 0.806374 | 8.484482e-50 | -8.615850e-47 |
| Msa0884300 | Msa1070510 | 0.812374 | 4.377944e-51 | -8.615850e-47 |
| Msa0884300 | Msa1070710 | 0.801530 | 8.620254e-49 | -8.615850e-47 |
| Msa0884300 | Msa1078600 | 0.807647 | 4.563573e-50 | -8.615850e-47 |
| Msa0884300 | Msa1078770 | 0.800750 | 1.244742e-48 | -8.615850e-47 |
| Msa0884300 | Msa1093390 | 0.800499 | 1.400548e-48 | -8.615850e-47 |
| Msa0884300 | Msa1098350 | 0.802621 | 5.142962e-49 | -8.615850e-47 |
| Msa0884300 | Msa1098990 | 0.801230 | 9.933995e-49 | -8.615850e-47 |
| Msa0884300 | Msa1106320 | 0.842695 | 2.210141e-58 | -8.615850e-47 |
| Msa0884300 | Msa1106830 | 0.809068 | 2.271753e-50 | -8.615850e-47 |
| Msa0884300 | Msa1109890 | -0.800633 | 1.315200e-48 | -8.615850e-47 |
| Msa0884300 | Msa1113210 | 0.841105 | 5.814159e-58 | -8.615850e-47 |
| Msa0884300 | Msa1113280 | 0.807619 | 4.626050e-50 | -8.615850e-47 |
| Msa0884300 | Msa1118870 | 0.801709 | 7.922289e-49 | -8.615850e-47 |
| Msa0884300 | Msa1118890 | 0.814961 | 1.179893e-51 | -8.615850e-47 |
| Msa0884300 | Msa1128230 | 0.807447 | 5.031468e-50 | -8.615850e-47 |
| Msa0884300 | Msa1133180 | 0.839109 | 1.928481e-57 | -8.615850e-47 |
| Msa0884300 | Msa1138440 | 0.808454 | 3.072825e-50 | -8.615850e-47 |
| Msa0884300 | Msa1138450 | 0.840842 | 6.816827e-58 | -8.615850e-47 |
| Msa0884300 | Msa1138480 | 0.818341 | 2.061484e-52 | -8.615850e-47 |
| Msa0884300 | Msa1143860 | 0.802160 | 6.400699e-49 | -8.615850e-47 |
| Msa0884300 | Msa1144470 | 0.803462 | 3.446492e-49 | -8.615850e-47 |
| Msa0884300 | Msa1145930 | 0.804278 | 2.332567e-49 | -8.615850e-47 |
| Msa0884300 | Msa1149570 | 0.828796 | 7.364327e-55 | -8.615850e-47 |
| Msa0884300 | Msa1150170 | 0.805573 | 1.250813e-49 | -8.615850e-47 |
| Msa0884300 | Msa1150250 | 0.813087 | 3.056298e-51 | -8.615850e-47 |
| Msa0884300 | Msa1151970 | 0.810877 | 9.265101e-51 | -8.615850e-47 |
| Msa0884300 | Msa1158540 | 0.808071 | 3.708691e-50 | -8.615850e-47 |
| Msa0884300 | Msa1173380 | 0.804761 | 1.849650e-49 | -8.615850e-47 |
| Msa0884300 | Msa1174450 | -0.820291 | 7.412902e-53 | -8.615850e-47 |
| Msa0884300 | Msa1181730 | 0.817765 | 2.782855e-52 | -8.615850e-47 |
| Msa0884300 | Msa1182800 | 0.830250 | 3.265261e-55 | -8.615850e-47 |
| Msa0884300 | Msa1182830 | 0.808139 | 3.587075e-50 | -8.615850e-47 |
| Msa0884300 | Msa1184640 | 0.803939 | 2.743800e-49 | -8.615850e-47 |
| Msa0884300 | Msa1185030 | 0.806098 | 9.703021e-50 | -8.615850e-47 |
| Msa0884300 | Msa1193400 | 0.836827 | 7.446373e-57 | -8.615850e-47 |
| Msa0884300 | Msa1193430 | 0.831431 | 1.675703e-55 | -8.615850e-47 |
| Msa0884300 | Msa1199670 | 0.805010 | 1.640558e-49 | -8.615850e-47 |
| Msa0884300 | Msa1204470 | 0.811362 | 7.273454e-51 | -8.615850e-47 |
| Msa0884300 | Msa1205520 | 0.803804 | 2.927488e-49 | -8.615850e-47 |
| Msa0884300 | Msa1205560 | 0.822417 | 2.395887e-53 | -8.615850e-47 |
| Msa0884300 | Msa1208250 | 0.807646 | 4.565499e-50 | -8.615850e-47 |
| Msa0884300 | Msa1223050 | 0.818212 | 2.205375e-52 | -8.615850e-47 |
| Msa0884300 | Msa1224310 | 0.802555 | 5.306387e-49 | -8.615850e-47 |
| Msa0884300 | Msa1225140 | 0.801242 | 9.874800e-49 | -8.615850e-47 |
| Msa0884300 | Msa1229880 | 0.813459 | 2.532250e-51 | -8.615850e-47 |
| Msa0884300 | Msa1233770 | 0.811133 | 8.152973e-51 | -8.615850e-47 |
| Msa0884300 | Msa1235880 | 0.826912 | 2.090442e-54 | -8.615850e-47 |
| Msa0884300 | Msa1239000 | 0.805269 | 1.448082e-49 | -8.615850e-47 |
| Msa0884300 | Msa1243730 | 0.833839 | 4.235725e-56 | -8.615850e-47 |
| Msa0884300 | Msa1249410 | 0.828146 | 1.057525e-54 | -8.615850e-47 |
| Msa0884300 | Msa1256430 | 0.810290 | 1.240510e-50 | -8.615850e-47 |
| Msa0884300 | Msa1258200 | 0.812374 | 4.379114e-51 | -8.615850e-47 |
| Msa0884300 | Msa1276080 | 0.803614 | 3.205226e-49 | -8.615850e-47 |
| Msa0884300 | Msa1279320 | 0.804579 | 2.018469e-49 | -8.615850e-47 |
| Msa0884300 | Msa1296680 | 0.804029 | 2.628049e-49 | -8.615850e-47 |
| Msa0884300 | Msa1297720 | 0.826576 | 2.514873e-54 | -8.615850e-47 |
| Msa0884300 | Msa1303040 | 0.803883 | 2.818347e-49 | -8.615850e-47 |
| Msa0884300 | Msa1310620 | 0.803464 | 3.443110e-49 | -8.615850e-47 |
| Msa0884300 | Msa1314810 | -0.820313 | 7.326518e-53 | -8.615850e-47 |
| Msa0884300 | Msa1315990 | 0.809982 | 1.445461e-50 | -8.615850e-47 |
| Msa0884300 | Msa1331490 | 0.811579 | 6.523565e-51 | -8.615850e-47 |
| Msa0884300 | Msa1353270 | 0.804728 | 1.879151e-49 | -8.615850e-47 |
| Msa0884300 | Msa1357380 | 0.804562 | 2.035402e-49 | -8.615850e-47 |
| Msa0884300 | Msa1359620 | 0.816606 | 5.072172e-52 | -8.615850e-47 |
| Msa0884300 | Msa1361200 | 0.813513 | 2.463763e-51 | -8.615850e-47 |
| Msa0884300 | Msa1366700 | 0.800300 | 1.537475e-48 | -8.615850e-47 |
| Msa0884300 | Msa1368150 | 0.817263 | 3.611054e-52 | -8.615850e-47 |
| Msa0884300 | Msa1368800 | 0.817632 | 2.981682e-52 | -8.615850e-47 |
| Msa0884300 | Msa1371690 | 0.814388 | 1.580371e-51 | -8.615850e-47 |
| Msa0884300 | Msa1372570 | 0.806293 | 8.825245e-50 | -8.615850e-47 |
| Msa0884300 | Msa1373920 | 0.810044 | 1.401922e-50 | -8.615850e-47 |
| Msa0884300 | Msa1376010 | 0.801451 | 8.949914e-49 | -8.615850e-47 |
| Msa0884300 | Msa1376230 | 0.809355 | 1.971659e-50 | -8.615850e-47 |
| Msa0884300 | Msa1378840 | 0.802492 | 5.468874e-49 | -8.615850e-47 |
| Msa0884300 | Msa1379270 | 0.806109 | 9.648057e-50 | -8.615850e-47 |
| Msa0884300 | Msa1386020 | 0.814005 | 1.920519e-51 | -8.615850e-47 |
| Msa0884300 | Msa1391600 | 0.815377 | 9.536078e-52 | -8.615850e-47 |
| Msa0884300 | Msa1393550 | 0.817988 | 2.478171e-52 | -8.615850e-47 |
| Msa0884300 | Msa1394810 | 0.804285 | 2.324928e-49 | -8.615850e-47 |
| Msa0884300 | Msa1395580 | 0.808023 | 3.797420e-50 | -8.615850e-47 |
| Msa0884300 | Msa1395700 | 0.800647 | 1.306616e-48 | -8.615850e-47 |
| Msa0884300 | Msa1403700 | 0.817501 | 3.192376e-52 | -8.615850e-47 |
| Msa0884300 | Msa1404690 | 0.813670 | 2.275542e-51 | -8.615850e-47 |
| Msa0884300 | Msa1405990 | 0.815425 | 9.307312e-52 | -8.615850e-47 |
| Msa0884300 | Msa1406020 | 0.800826 | 1.201153e-48 | -8.615850e-47 |
| Msa0884300 | Msa1418010 | 0.800149 | 1.650347e-48 | -8.615850e-47 |
| Msa0884300 | Msa1425110 | 0.818417 | 1.981795e-52 | -8.615850e-47 |
| Msa0884300 | Msa1426310 | 0.818466 | 1.931962e-52 | -8.615850e-47 |
| Msa0884300 | Msa1428790 | 0.807895 | 4.041567e-50 | -8.615850e-47 |
| Msa0884300 | Msa1432350 | 0.800953 | 1.131588e-48 | -8.615850e-47 |
| Msa0884300 | Msa1436660 | 0.801089 | 1.061363e-48 | -8.615850e-47 |
| Msa0884300 | Msa1443550 | 0.832722 | 8.035819e-56 | -8.615850e-47 |
| Msa0884300 | Msa1445970 | 0.809567 | 1.775254e-50 | -8.615850e-47 |
| Msa0884300 | Msa1450420 | 0.805955 | 1.039840e-49 | -8.615850e-47 |
| Msa0884300 | Msa1450780 | 0.815925 | 7.199128e-52 | -8.615850e-47 |
| Msa0884300 | Msa1451480 | 0.814633 | 1.394995e-51 | -8.615850e-47 |
| Msa0884300 | Msa1453540 | 0.810929 | 9.026469e-51 | -8.615850e-47 |
| Msa0884300 | Msa1456620 | 0.815027 | 1.141074e-51 | -8.615850e-47 |
| Msa0884300 | Msa1463500 | 0.811020 | 8.628090e-51 | -8.615850e-47 |
| Msa0884300 | Msa1464800 | 0.800275 | 1.555740e-48 | -8.615850e-47 |
| Msa0884300 | Msa1465380 | 0.808587 | 2.878831e-50 | -8.615850e-47 |
| Msa0884300 | Msa1465950 | 0.804390 | 2.210527e-49 | -8.615850e-47 |
| Msa0884300 | Msa1466170 | 0.801438 | 9.002332e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0884300 | MtrunA17_Chr4g0061511 | 94.872 | 390 | 19 | 1 | 2 | 391 | 3 | 391 | 0.0 | 767 |
| Msa0884300 | MtrunA17_Chr5g0445151 | 27.469 | 324 | 194 | 14 | 44 | 355 | 37 | 331 | 8.84e-17 | 82.4 |
| Msa0884300 | MtrunA17_Chr5g0445151 | 23.313 | 326 | 216 | 9 | 47 | 364 | 358 | 657 | 8.74e-16 | 79.3 |
| Msa0884300 | MtrunA17_Chr4g0074331 | 25.152 | 330 | 200 | 12 | 47 | 364 | 374 | 668 | 4.82e-15 | 77.0 |
| Msa0884300 | MtrunA17_Chr3g0100611 | 24.771 | 327 | 214 | 11 | 37 | 355 | 29 | 331 | 7.11e-15 | 76.6 |
| Msa0884300 | MtrunA17_Chr3g0100611 | 22.540 | 315 | 210 | 8 | 47 | 355 | 358 | 644 | 2.10e-13 | 72.0 |
| Msa0884300 | MtrunA17_Chr2g0304791 | 27.083 | 288 | 171 | 13 | 82 | 361 | 13 | 269 | 1.73e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0884300 | AT1G74210.1 | 71.907 | 388 | 107 | 2 | 4 | 390 | 3 | 389 | 0.0 | 580 |
| Msa0884300 | AT5G08030.1 | 74.504 | 353 | 89 | 1 | 16 | 368 | 16 | 367 | 0.0 | 559 |
| Msa0884300 | AT5G08030.2 | 74.504 | 353 | 89 | 1 | 16 | 368 | 31 | 382 | 0.0 | 558 |
| Msa0884300 | AT1G66970.1 | 23.975 | 317 | 208 | 10 | 47 | 355 | 369 | 660 | 1.02e-15 | 79.3 |
| Msa0884300 | AT3G20520.1 | 21.713 | 327 | 227 | 8 | 47 | 364 | 340 | 646 | 1.24e-15 | 79.3 |
| Msa0884300 | AT1G66970.2 | 23.975 | 317 | 208 | 10 | 47 | 355 | 391 | 682 | 1.29e-15 | 79.3 |
| Msa0884300 | AT1G66970.3 | 23.418 | 316 | 211 | 9 | 47 | 355 | 175 | 466 | 1.53e-15 | 78.6 |
| Msa0884300 | AT4G26690.1 | 22.713 | 317 | 211 | 9 | 47 | 355 | 363 | 653 | 4.84e-15 | 77.4 |
| Msa0884300 | AT5G55480.1 | 21.321 | 333 | 232 | 9 | 47 | 372 | 368 | 677 | 6.03e-15 | 77.0 |
| Msa0884300 | AT1G66980.3 | 22.981 | 322 | 204 | 8 | 47 | 355 | 372 | 662 | 2.48e-12 | 69.3 |
| Msa0884300 | AT1G66980.2 | 22.981 | 322 | 204 | 8 | 47 | 355 | 401 | 691 | 2.55e-12 | 69.3 |
| Msa0884300 | AT1G66980.4 | 22.981 | 322 | 204 | 8 | 47 | 355 | 355 | 645 | 2.76e-12 | 68.9 |
| Msa0884300 | AT1G66980.1 | 22.981 | 322 | 204 | 8 | 47 | 355 | 372 | 662 | 2.92e-12 | 68.9 |
Find 101 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGTTGATTTCACATTAA+AGG | 0.140506 | 6_1:+37563814 | Msa0884300:intron |
| TCGTTGCTTGCCGCGGAAAT+AGG | 0.171136 | 6_1:-37561152 | None:intergenic |
| CCCCTATGTGCAACGTTATA+TGG | 0.202641 | 6_1:-37562983 | None:intergenic |
| TGAATCAGAGGTTCTGCTTT+AGG | 0.244144 | 6_1:+37563855 | Msa0884300:CDS |
| GGAATAGTTAGTCTGTTTAA+TGG | 0.244369 | 6_1:+37566027 | Msa0884300:three_prime_UTR |
| GTTGAAACACTTCAGAAATA+TGG | 0.248447 | 6_1:+37564612 | Msa0884300:CDS |
| AAGCAATTTGTTGTAGGAAT+TGG | 0.255129 | 6_1:+37565009 | Msa0884300:CDS |
| TGATTACTGGATCAACAAAA+TGG | 0.274727 | 6_1:+37565591 | Msa0884300:CDS |
| TTGTGAATATATAAATAATA+AGG | 0.306882 | 6_1:+37565959 | Msa0884300:three_prime_UTR |
| GTATCGTAGGAACGTGAAAA+TGG | 0.309244 | 6_1:-37561188 | None:intergenic |
| TCATCGATTAATAAAATCTT+AGG | 0.311423 | 6_1:-37564738 | None:intergenic |
| CAATCTATATTGATTGGAAT+TGG | 0.313729 | 6_1:+37565891 | Msa0884300:three_prime_UTR |
| TATCTCAATGTCTTCGTTAT+CGG | 0.318763 | 6_1:+37561270 | Msa0884300:exon |
| TATGCGTCGCGAGTTTCTTC+AGG | 0.321203 | 6_1:-37563022 | None:intergenic |
| AGAAACTCGCGACGCATATC+TGG | 0.327755 | 6_1:+37563027 | Msa0884300:CDS |
| GAATCAGAGGTTCTGCTTTA+GGG | 0.329665 | 6_1:+37563856 | Msa0884300:CDS |
| ACATATAAGAACACCATCTT+TGG | 0.329743 | 6_1:-37563213 | None:intergenic |
| TTCTCATTTCTGTACGTGTA+TGG | 0.343376 | 6_1:-37565523 | None:intergenic |
| TCTTGTCATCTTGACGGTTA+GGG | 0.364460 | 6_1:-37565675 | None:intergenic |
| ATCTCAATGTCTTCGTTATC+GGG | 0.369178 | 6_1:+37561271 | Msa0884300:exon |
| GTCTTGTCATCTTGACGGTT+AGG | 0.371938 | 6_1:-37565676 | None:intergenic |
| CTTACAAGGAGTATGATTAC+TGG | 0.378731 | 6_1:+37565578 | Msa0884300:CDS |
| TACATAAAGCAATTTGTTGT+AGG | 0.379581 | 6_1:+37565003 | Msa0884300:CDS |
| TTATTTAATTAGATTGTCAT+AGG | 0.381468 | 6_1:-37565822 | None:intergenic |
| ATGATTATGTGCAGTCATAT+TGG | 0.381861 | 6_1:+37564953 | Msa0884300:intron |
| AGGCCTTTGTATCCACTTCC+TGG | 0.386639 | 6_1:+37562917 | Msa0884300:CDS |
| AATAGTCAATCTATATTGAT+TGG | 0.386964 | 6_1:+37565885 | Msa0884300:three_prime_UTR |
| CTCCTTCGGATCTTGTTGCC+AGG | 0.400869 | 6_1:+37565082 | Msa0884300:CDS |
| GATATATACACAAGTGAAGT+TGG | 0.401531 | 6_1:-37564699 | None:intergenic |
| TGATTATGTGCAGTCATATT+GGG | 0.403241 | 6_1:+37564954 | Msa0884300:intron |
| ATCAACAAAATGGGAATTGA+TGG | 0.404261 | 6_1:+37565601 | Msa0884300:CDS |
| TTAAACAGACTAACTATTCC+AGG | 0.404957 | 6_1:-37566024 | None:intergenic |
| CGTTGCTTGCCGCGGAAATA+GGG | 0.406739 | 6_1:-37561151 | None:intergenic |
| GATATAAATAACAGGTGAAA+TGG | 0.409069 | 6_1:+37564559 | Msa0884300:intron |
| TCCATATAACGTTGCACATA+GGG | 0.410842 | 6_1:+37562982 | Msa0884300:CDS |
| TTCAACACAAGACACTAATC+AGG | 0.419403 | 6_1:+37564770 | Msa0884300:CDS |
| TTGGATGCACCCAGAGTTGT+TGG | 0.424638 | 6_1:+37564104 | Msa0884300:CDS |
| AAATAAGAAATTAGTAATGT+TGG | 0.432858 | 6_1:+37565852 | Msa0884300:three_prime_UTR |
| ACATGTTGATTGATAAGTAC+TGG | 0.437339 | 6_1:-37564149 | None:intergenic |
| TTTAGGGATCAACAGTTTAA+CGG | 0.438221 | 6_1:+37563872 | Msa0884300:CDS |
| TTTCAAAATAATAAAGTCCC+TGG | 0.439399 | 6_1:+37566006 | Msa0884300:three_prime_UTR |
| TCCCAGTGAAATCTGTAAAC+AGG | 0.445980 | 6_1:-37565624 | None:intergenic |
| AGGATATATTCCAACAACTC+TGG | 0.460634 | 6_1:-37564114 | None:intergenic |
| CAGTAATCATACTCCTTGTA+AGG | 0.464985 | 6_1:-37565577 | None:intergenic |
| CTTCCATGGTCACCTTTGCC+AGG | 0.470270 | 6_1:-37562935 | None:intergenic |
| CAAATTGCTTTATGTAGTCT+AGG | 0.472934 | 6_1:-37564996 | None:intergenic |
| GAAGAGGCTGCTTACTTCCA+TGG | 0.474342 | 6_1:-37562949 | None:intergenic |
| ATGCAGTCTTGTCATCTTGA+CGG | 0.475282 | 6_1:-37565681 | None:intergenic |
| GTCGGACGGCAAACGATTTG+AGG | 0.480583 | 6_1:+37564581 | Msa0884300:CDS |
| AGAGTTCATTACCATAGCAT+TGG | 0.485013 | 6_1:+37564085 | Msa0884300:CDS |
| TGGTCACCTTTGCCAGGAAG+TGG | 0.486182 | 6_1:-37562929 | None:intergenic |
| GATTACTGGATCAACAAAAT+GGG | 0.486674 | 6_1:+37565592 | Msa0884300:CDS |
| GTTGCACATAGGGGATCAAA+TGG | 0.496420 | 6_1:+37562992 | Msa0884300:CDS |
| ACGGCAAACGATTTGAGGAC+AGG | 0.499996 | 6_1:+37564586 | Msa0884300:CDS |
| GGCCTGTTTACAGATTTCAC+TGG | 0.506585 | 6_1:+37565622 | Msa0884300:CDS |
| CAAGTATGTGATGACTCCTT+CGG | 0.509569 | 6_1:+37565068 | Msa0884300:CDS |
| GATATATTATCTTCCAAAGA+TGG | 0.509816 | 6_1:+37563200 | Msa0884300:CDS |
| TGTGTATATATCAAATCAAA+CGG | 0.510034 | 6_1:+37564710 | Msa0884300:CDS |
| TTGTTAAGTCTTCGTATCGT+AGG | 0.517971 | 6_1:-37561201 | None:intergenic |
| TAAAGTTGAAATGCAAATAC+CGG | 0.526857 | 6_1:-37565546 | None:intergenic |
| GGATATATTCCAACAACTCT+GGG | 0.526903 | 6_1:-37564113 | None:intergenic |
| TCCTTCGGATCTTGTTGCCA+GGG | 0.530863 | 6_1:+37565083 | Msa0884300:CDS |
| GTCCATATAACGTTGCACAT+AGG | 0.536790 | 6_1:+37562981 | Msa0884300:CDS |
| CTTTAGTCAAGATCCTTACA+AGG | 0.536799 | 6_1:+37565564 | Msa0884300:CDS |
| CTTGTCATCTTGACGGTTAG+GGG | 0.536985 | 6_1:-37565674 | None:intergenic |
| GCCTGTTTACAGATTTCACT+GGG | 0.542364 | 6_1:+37565623 | Msa0884300:CDS |
| ATTAAAGTCGTTGCTTGCCG+CGG | 0.544151 | 6_1:-37561159 | None:intergenic |
| ACTTCAGAAATATGGATACA+AGG | 0.547057 | 6_1:+37564620 | Msa0884300:CDS |
| TTGTATCCACTTCCTGGCAA+AGG | 0.547465 | 6_1:+37562923 | Msa0884300:CDS |
| ACACGTACAGAAATGAGAAC+CGG | 0.548378 | 6_1:+37565527 | Msa0884300:CDS |
| GGATACTATACTAGTACCTC+TGG | 0.548713 | 6_1:+37565041 | Msa0884300:CDS |
| GTTCATACCTGTCAAAACAT+TGG | 0.548979 | 6_1:+37564643 | Msa0884300:CDS |
| GGCACATGCTCATAATCTGC+AGG | 0.551055 | 6_1:+37565104 | Msa0884300:CDS |
| AAAAGAACATATGAAGTCGA+AGG | 0.561446 | 6_1:+37563299 | Msa0884300:CDS |
| GCTGTGTTCCTCACTCACTC+AGG | 0.561455 | 6_1:-37561227 | None:intergenic |
| TTGCAGAGAGCTATTGAGGA+AGG | 0.565109 | 6_1:+37563158 | Msa0884300:intron |
| AAAGAACATATGAAGTCGAA+GGG | 0.565876 | 6_1:+37563300 | Msa0884300:CDS |
| TGTAGGAATTGGACCTTCGA+AGG | 0.569372 | 6_1:+37565020 | Msa0884300:CDS |
| TAAATAACAGGTGAAATGGT+CGG | 0.572543 | 6_1:+37564563 | Msa0884300:intron |
| TCTGGGTGCATCCAATGCTA+TGG | 0.574074 | 6_1:-37564096 | None:intergenic |
| CAGATTATGAGCATGTGCCC+TGG | 0.581110 | 6_1:-37565100 | None:intergenic |
| CTTCCTGGCAAAGGTGACCA+TGG | 0.581158 | 6_1:+37562932 | Msa0884300:CDS |
| CTTCAGAAATATGGATACAA+GGG | 0.586885 | 6_1:+37564621 | Msa0884300:CDS |
| TATGGACGAAAAGTTTGAAG+AGG | 0.590205 | 6_1:-37562965 | None:intergenic |
| GTCGAAGGGGTCAATCACAC+TGG | 0.590461 | 6_1:+37563314 | Msa0884300:CDS |
| AACAATGACCTGAGTGAGTG+AGG | 0.601263 | 6_1:+37561219 | Msa0884300:five_prime_UTR |
| GCAAATGACTGTATAAATGC+AGG | 0.604021 | 6_1:-37564675 | None:intergenic |
| TAAACAGACTAACTATTCCA+GGG | 0.613989 | 6_1:-37566023 | None:intergenic |
| AGTCGCTGAGGGTGAATCAG+AGG | 0.615291 | 6_1:+37563843 | Msa0884300:CDS |
| AAAGGAATTAAAGTCGCTGA+GGG | 0.619575 | 6_1:+37563832 | Msa0884300:CDS |
| TAAAGGAATTAAAGTCGCTG+AGG | 0.621868 | 6_1:+37563831 | Msa0884300:CDS |
| CCATATAACGTTGCACATAG+GGG | 0.625643 | 6_1:+37562983 | Msa0884300:CDS |
| TTTCTATTGCTCGTGATTGG+GGG | 0.629901 | 6_1:+37562887 | Msa0884300:CDS |
| TAACAGGTGAAATGGTCGGA+CGG | 0.639574 | 6_1:+37564567 | Msa0884300:intron |
| GCCCTGGCAACAAGATCCGA+AGG | 0.642209 | 6_1:-37565084 | None:intergenic |
| TAATGTGGACCCTATTTCCG+CGG | 0.648966 | 6_1:+37561142 | None:intergenic |
| ACTAGTATAGTATCCTTCGA+AGG | 0.650372 | 6_1:-37565033 | None:intergenic |
| TTGCCAGGAAGTGGATACAA+AGG | 0.653361 | 6_1:-37562920 | None:intergenic |
| TATTATCAAGAATAAAGTCG+TGG | 0.657370 | 6_1:-37563238 | None:intergenic |
| ATCACATACTTGTTAACCAG+AGG | 0.666472 | 6_1:-37565057 | None:intergenic |
| AAGAACATATGAAGTCGAAG+GGG | 0.698335 | 6_1:+37563301 | Msa0884300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr6_1:37561577-37561596 | Msa0884300:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr6_1:37561576-37561595 | Msa0884300:intron | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr6_1:37561577-37561596 | Msa0884300:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr6_1:37561576-37561595 | Msa0884300:intron | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr6_1:37561576-37561595 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr6_1:37561577-37561596 | Msa0884300:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr6_1:37561576-37561595 | Msa0884300:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | - | chr6_1:37561577-37561596 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr6_1:37561576-37561595 | None:intergenic | 0.0% |
| !!! | TTTTTAAAAATATTATAATT+TGG | - | chr6_1:37563123-37563142 | None:intergenic | 0.0% |
| !! | TATATATATATATATATAGG+GGG | + | chr6_1:37561584-37561603 | Msa0884300:intron | 10.0% |
| !! | CTAAAATTAACTTAAAATTA+GGG | - | chr6_1:37561935-37561954 | None:intergenic | 10.0% |
| !! | ACTAAAATTAACTTAAAATT+AGG | - | chr6_1:37561936-37561955 | None:intergenic | 10.0% |
| !!! | ATGAATTTTTATATTTTTGA+TGG | - | chr6_1:37562063-37562082 | None:intergenic | 10.0% |
| !! | TATATATATATATATATAGC+TGG | + | chr6_1:37562691-37562710 | Msa0884300:intron | 10.0% |
| !! | ATTAAATTGATATAAATAAC+AGG | + | chr6_1:37564551-37564570 | Msa0884300:intron | 10.0% |
| !! | TTGTGAATATATAAATAATA+AGG | + | chr6_1:37565959-37565978 | Msa0884300:three_prime_UTR | 10.0% |
| !! | TTAAATAGTTATACTTAAGT+AGG | + | chr6_1:37561687-37561706 | Msa0884300:intron | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | - | chr6_1:37561904-37561923 | None:intergenic | 15.0% |
| !!! | ATAGTGATTGAAAATTTTAT+AGG | - | chr6_1:37561905-37561924 | None:intergenic | 15.0% |
| !!! | AAATTTTCAATCACTATTTT+TGG | + | chr6_1:37561908-37561927 | Msa0884300:intron | 15.0% |
| !!! | TATATGGTTAAATATGTTTT+TGG | - | chr6_1:37562305-37562324 | None:intergenic | 15.0% |
| !! | TGTTTATAATTACAAAACAT+GGG | - | chr6_1:37562474-37562493 | None:intergenic | 15.0% |
| !! | TTGTTTATAATTACAAAACA+TGG | - | chr6_1:37562475-37562494 | None:intergenic | 15.0% |
| !!! | TTTATGAATATATTTTACGA+AGG | - | chr6_1:37563393-37563412 | None:intergenic | 15.0% |
| !!! | TAAACGTATTTCTTAATTTT+AGG | + | chr6_1:37563630-37563649 | Msa0884300:intron | 15.0% |
| !!! | AAACGTATTTCTTAATTTTA+GGG | + | chr6_1:37563631-37563650 | Msa0884300:intron | 15.0% |
| !! | TTATTTAATTAGATTGTCAT+AGG | - | chr6_1:37565825-37565844 | None:intergenic | 15.0% |
| !! | AAATAAGAAATTAGTAATGT+TGG | + | chr6_1:37565852-37565871 | Msa0884300:three_prime_UTR | 15.0% |
| !! | AACAAGTGAAAAATAAATGA+AGG | - | chr6_1:37561497-37561516 | None:intergenic | 20.0% |
| !!! | TATAGGGTTAAATATGTTTT+TGG | + | chr6_1:37561817-37561836 | Msa0884300:intron | 20.0% |
| !! | ATATGAGTTTACATTAAAAG+AGG | + | chr6_1:37562186-37562205 | Msa0884300:intron | 20.0% |
| !! | TATGAGTTTACATTAAAAGA+GGG | + | chr6_1:37562187-37562206 | Msa0884300:intron | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+GGG | + | chr6_1:37562278-37562297 | Msa0884300:intron | 20.0% |
| !! | TAAAAACACTAAAAACACTA+GGG | + | chr6_1:37562406-37562425 | Msa0884300:intron | 20.0% |
| !!! | TGTTTTAGTAAAGTATAAGT+AGG | + | chr6_1:37562561-37562580 | Msa0884300:intron | 20.0% |
| !! | TAGTTAGTAAAGTATGAAAA+TGG | + | chr6_1:37562736-37562755 | Msa0884300:intron | 20.0% |
| !! | AGTTAGTAAAGTATGAAAAT+GGG | + | chr6_1:37562737-37562756 | Msa0884300:intron | 20.0% |
| !! | AATGGTAACTCAATAAATTA+AGG | - | chr6_1:37563600-37563619 | None:intergenic | 20.0% |
| !! | AACAAAATGATTTATTGTGA+CGG | + | chr6_1:37564236-37564255 | Msa0884300:intron | 20.0% |
| !! | TTAGGATAATGATTATTGTA+CGG | + | chr6_1:37564348-37564367 | Msa0884300:intron | 20.0% |
| !!! | GTGAGATTATGTTATATTTT+TGG | + | chr6_1:37564371-37564390 | Msa0884300:intron | 20.0% |
| !! | TGTGTATATATCAAATCAAA+CGG | + | chr6_1:37564710-37564729 | Msa0884300:CDS | 20.0% |
| !!! | TCATCGATTAATAAAATCTT+AGG | - | chr6_1:37564741-37564760 | None:intergenic | 20.0% |
| !! | CAACATTGTATAACATTAAA+CGG | - | chr6_1:37564879-37564898 | None:intergenic | 20.0% |
| !!! | CATTACAGTAAAATTTTGTT+AGG | - | chr6_1:37564936-37564955 | None:intergenic | 20.0% |
| !! | AATAGTCAATCTATATTGAT+TGG | + | chr6_1:37565885-37565904 | Msa0884300:three_prime_UTR | 20.0% |
| ! | ATGAAAAGTGAAACATTTGA+AGG | - | chr6_1:37561372-37561391 | None:intergenic | 25.0% |
| !!! | TTCTGCTTTTATCACTAATT+CGG | + | chr6_1:37561436-37561455 | Msa0884300:intron | 25.0% |
| ! | ATTCTTATCATTCTCACATA+AGG | - | chr6_1:37561631-37561650 | None:intergenic | 25.0% |
| ! | TATATATACCTAGACCAAAA+AGG | - | chr6_1:37561763-37561782 | None:intergenic | 25.0% |
| !! | AAATTTTCCATCTTCACTTT+TGG | - | chr6_1:37562214-37562233 | None:intergenic | 25.0% |
| !! | AAGTGAAGATGGAAAATTTT+TGG | + | chr6_1:37562215-37562234 | Msa0884300:intron | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | + | chr6_1:37562246-37562265 | Msa0884300:intron | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | + | chr6_1:37562247-37562266 | Msa0884300:intron | 25.0% |
| !!! | CGAAAAGTTGGTATATTTAT+AGG | + | chr6_1:37562277-37562296 | Msa0884300:intron | 25.0% |
| !!! | CTAGTGTTTTTAGTGTTTTT+AGG | - | chr6_1:37562407-37562426 | None:intergenic | 25.0% |
| ! | CTAAAAACACTAAAAACACT+AGG | + | chr6_1:37562405-37562424 | Msa0884300:intron | 25.0% |
| !!! | TGTTTTGGTAAATAACTAGT+AGG | - | chr6_1:37562451-37562470 | None:intergenic | 25.0% |
| ! | TAAAGTTTAACAGAGACAAA+AGG | + | chr6_1:37562537-37562556 | Msa0884300:intron | 25.0% |
| ! | AAAGTTTAACAGAGACAAAA+GGG | + | chr6_1:37562538-37562557 | Msa0884300:intron | 25.0% |
| ! | TCAAATCATAAATGTAACCT+AGG | + | chr6_1:37562848-37562867 | Msa0884300:intron | 25.0% |
| ! | GATATATTATCTTCCAAAGA+TGG | + | chr6_1:37563200-37563219 | Msa0884300:CDS | 25.0% |
| ! | TATTATCAAGAATAAAGTCG+TGG | - | chr6_1:37563241-37563260 | None:intergenic | 25.0% |
| ! | TACGTTTATACAAAGCAAAA+TGG | - | chr6_1:37563618-37563637 | None:intergenic | 25.0% |
| ! | AAAGAATGGAATATTGTTTC+TGG | - | chr6_1:37563728-37563747 | None:intergenic | 25.0% |
| !!! | TGAACCATTTTAAAATCTGA+CGG | - | chr6_1:37563935-37563954 | None:intergenic | 25.0% |
| ! | TATCCTAAACTTAAGCTAAA+GGG | - | chr6_1:37564336-37564355 | None:intergenic | 25.0% |
| ! | TTATCCTAAACTTAAGCTAA+AGG | - | chr6_1:37564337-37564356 | None:intergenic | 25.0% |
| ! | TAGGATAATGATTATTGTAC+GGG | + | chr6_1:37564349-37564368 | Msa0884300:intron | 25.0% |
| !! | CATATGAAATTTAAGACCTT+TGG | - | chr6_1:37564460-37564479 | None:intergenic | 25.0% |
| ! | GATATAAATAACAGGTGAAA+TGG | + | chr6_1:37564559-37564578 | Msa0884300:intron | 25.0% |
| !! | TGAGTAATGTATTTTACCTT+TGG | + | chr6_1:37564793-37564812 | Msa0884300:intron | 25.0% |
| ! | ATCAATTTGTAGAAGAACAA+GGG | - | chr6_1:37564824-37564843 | None:intergenic | 25.0% |
| !! | AGTAAAATTTTGTTAGGCTT+TGG | - | chr6_1:37564930-37564949 | None:intergenic | 25.0% |
| !!! | TACATAAAGCAATTTGTTGT+AGG | + | chr6_1:37565003-37565022 | Msa0884300:CDS | 25.0% |
| ! | CTAGATAACAAATTAAAGGT+GGG | - | chr6_1:37565242-37565261 | None:intergenic | 25.0% |
| ! | TCTAGATAACAAATTAAAGG+TGG | - | chr6_1:37565243-37565262 | None:intergenic | 25.0% |
| ! | CACTCTAGATAACAAATTAA+AGG | - | chr6_1:37565246-37565265 | None:intergenic | 25.0% |
| ! | TTACCAAATAGAAGCTATTA+AGG | + | chr6_1:37565271-37565290 | Msa0884300:intron | 25.0% |
| ! | TAAAGTTGAAATGCAAATAC+CGG | - | chr6_1:37565549-37565568 | None:intergenic | 25.0% |
| !! | AGCAATTTTATGTAATAGCT+CGG | - | chr6_1:37565707-37565726 | None:intergenic | 25.0% |
| !!! | TGCTTATGAATGATTTTTTG+AGG | + | chr6_1:37565738-37565757 | Msa0884300:exon | 25.0% |
| !! | CAATCTATATTGATTGGAAT+TGG | + | chr6_1:37565891-37565910 | Msa0884300:three_prime_UTR | 25.0% |
| ! | TTTCAAAATAATAAAGTCCC+TGG | + | chr6_1:37566006-37566025 | Msa0884300:three_prime_UTR | 25.0% |
| TATCTCAATGTCTTCGTTAT+CGG | + | chr6_1:37561270-37561289 | Msa0884300:exon | 30.0% | |
| TGAATCTATCTAAGTTATGC+AGG | + | chr6_1:37561314-37561333 | Msa0884300:intron | 30.0% | |
| AAATAAATGAAGGCAAGGTA+AGG | - | chr6_1:37561487-37561506 | None:intergenic | 30.0% | |
| GTGAAAAATAAATGAAGGCA+AGG | - | chr6_1:37561492-37561511 | None:intergenic | 30.0% | |
| AGCCATTGGATTAAAATAGA+TGG | + | chr6_1:37561658-37561677 | Msa0884300:intron | 30.0% | |
| !!! | AGCCATCTATTTTAATCCAA+TGG | - | chr6_1:37561663-37561682 | None:intergenic | 30.0% |
| ! | CCAAAAAGGATTTTGAATGA+GGG | - | chr6_1:37561749-37561768 | None:intergenic | 30.0% |
| ! | ACCAAAAAGGATTTTGAATG+AGG | - | chr6_1:37561750-37561769 | None:intergenic | 30.0% |
| !! | TTCAAAATCCTTTTTGGTCT+AGG | + | chr6_1:37561752-37561771 | Msa0884300:intron | 30.0% |
| ! | AGTTGAACGAAGATTTTAGA+GGG | - | chr6_1:37561875-37561894 | None:intergenic | 30.0% |
| ! | AAGTTGAACGAAGATTTTAG+AGG | - | chr6_1:37561876-37561895 | None:intergenic | 30.0% |
| !! | TGAAGATGGAAAATTTTTGG+AGG | + | chr6_1:37562218-37562237 | Msa0884300:intron | 30.0% |
| !!! | GTGTTTTTAGTGTTTTTAGG+TGG | - | chr6_1:37562404-37562423 | None:intergenic | 30.0% |
| ! | ATTACAAAACATGGGTGTTT+TGG | - | chr6_1:37562466-37562485 | None:intergenic | 30.0% |
| ! | TATATAGCTGGCTTATTATC+AGG | + | chr6_1:37562703-37562722 | Msa0884300:intron | 30.0% |
| AGTAAAGTATGAAAATGGGT+TGG | + | chr6_1:37562741-37562760 | Msa0884300:intron | 30.0% | |
| ATGATTTGATACACCAAGTT+AGG | - | chr6_1:37562837-37562856 | None:intergenic | 30.0% | |
| ACGAGCAATAGAAAAACAAA+AGG | - | chr6_1:37562881-37562900 | None:intergenic | 30.0% | |
| ! | TTTTTCTATTGCTCGTGATT+GGG | + | chr6_1:37562885-37562904 | Msa0884300:CDS | 30.0% |
| ! | ATTTTGCTAGAAGAGTTAAG+TGG | - | chr6_1:37563058-37563077 | None:intergenic | 30.0% |
| CAGATGTAAAGTAATGAGAA+AGG | - | chr6_1:37563087-37563106 | None:intergenic | 30.0% | |
| ACATATAAGAACACCATCTT+TGG | - | chr6_1:37563216-37563235 | None:intergenic | 30.0% | |
| AAAAGAACATATGAAGTCGA+AGG | + | chr6_1:37563299-37563318 | Msa0884300:CDS | 30.0% | |
| AAAGAACATATGAAGTCGAA+GGG | + | chr6_1:37563300-37563319 | Msa0884300:CDS | 30.0% | |
| !!! | AATCACACTGGATTTTTTGT+CGG | + | chr6_1:37563326-37563345 | Msa0884300:CDS | 30.0% |
| TTGGGCATTCTTAACAAATT+TGG | + | chr6_1:37563533-37563552 | Msa0884300:intron | 30.0% | |
| !!! | AAGACGTTTTATTTCTCGAT+AGG | + | chr6_1:37563658-37563677 | Msa0884300:intron | 30.0% |
| GAAAAAACTGGATGAAAGAA+TGG | - | chr6_1:37563742-37563761 | None:intergenic | 30.0% | |
| CTTGAAAGTGATGAAAAAAC+TGG | - | chr6_1:37563754-37563773 | None:intergenic | 30.0% | |
| ! | TGCAGTTGATTTCACATTAA+AGG | + | chr6_1:37563814-37563833 | Msa0884300:intron | 30.0% |
| TTTAGGGATCAACAGTTTAA+CGG | + | chr6_1:37563872-37563891 | Msa0884300:CDS | 30.0% | |
| ACATGTATAAGCGAAGAAAA+GGG | - | chr6_1:37563903-37563922 | None:intergenic | 30.0% | |
| !! | GGTTCAATGATCATTTTTAC+TGG | + | chr6_1:37563949-37563968 | Msa0884300:intron | 30.0% |
| TAAGTCTATTGCCTTATCTT+TGG | + | chr6_1:37564025-37564044 | Msa0884300:intron | 30.0% | |
| TGAAAGAGATTCCAAAGATA+AGG | - | chr6_1:37564039-37564058 | None:intergenic | 30.0% | |
| !! | TTATCTTTGGAATCTCTTTC+AGG | + | chr6_1:37564038-37564057 | Msa0884300:intron | 30.0% |
| !!! | AGTACTGGATTTTTTATCTC+AGG | - | chr6_1:37564137-37564156 | None:intergenic | 30.0% |
| ! | ACATGTTGATTGATAAGTAC+TGG | - | chr6_1:37564152-37564171 | None:intergenic | 30.0% |
| CATATGCACAATAAAAATGC+TGG | - | chr6_1:37564277-37564296 | None:intergenic | 30.0% | |
| TATTGTGCATATGCATCTAA+TGG | + | chr6_1:37564284-37564303 | Msa0884300:intron | 30.0% | |
| TCTAATGGTTAATGCTGATA+AGG | + | chr6_1:37564299-37564318 | Msa0884300:intron | 30.0% | |
| ! | TTTGGAATAAACATTCCAAC+AGG | - | chr6_1:37564442-37564461 | None:intergenic | 30.0% |
| TGTTGGAATGTTTATTCCAA+AGG | + | chr6_1:37564441-37564460 | Msa0884300:intron | 30.0% | |
| TAAATAACAGGTGAAATGGT+CGG | + | chr6_1:37564563-37564582 | Msa0884300:intron | 30.0% | |
| GTTGAAACACTTCAGAAATA+TGG | + | chr6_1:37564612-37564631 | Msa0884300:CDS | 30.0% | |
| ACTTCAGAAATATGGATACA+AGG | + | chr6_1:37564620-37564639 | Msa0884300:CDS | 30.0% | |
| CTTCAGAAATATGGATACAA+GGG | + | chr6_1:37564621-37564640 | Msa0884300:CDS | 30.0% | |
| GATATATACACAAGTGAAGT+TGG | - | chr6_1:37564702-37564721 | None:intergenic | 30.0% | |
| CATCAATTTGTAGAAGAACA+AGG | - | chr6_1:37564825-37564844 | None:intergenic | 30.0% | |
| ATGATTATGTGCAGTCATAT+TGG | + | chr6_1:37564953-37564972 | Msa0884300:intron | 30.0% | |
| TGATTATGTGCAGTCATATT+GGG | + | chr6_1:37564954-37564973 | Msa0884300:intron | 30.0% | |
| CAAATTGCTTTATGTAGTCT+AGG | - | chr6_1:37564999-37565018 | None:intergenic | 30.0% | |
| !! | AAGCAATTTGTTGTAGGAAT+TGG | + | chr6_1:37565009-37565028 | Msa0884300:CDS | 30.0% |
| AGGCGTAATATCATTCATAA+CGG | + | chr6_1:37565291-37565310 | Msa0884300:intron | 30.0% | |
| TGATTACTGGATCAACAAAA+TGG | + | chr6_1:37565591-37565610 | Msa0884300:CDS | 30.0% | |
| GATTACTGGATCAACAAAAT+GGG | + | chr6_1:37565592-37565611 | Msa0884300:CDS | 30.0% | |
| ATCAACAAAATGGGAATTGA+TGG | + | chr6_1:37565601-37565620 | Msa0884300:CDS | 30.0% | |
| !! | GTCTTCATAATTTTCAGGAA+TGG | + | chr6_1:37565647-37565666 | Msa0884300:CDS | 30.0% |
| ! | TGTAAAAAAAAGCATGTGCT+TGG | + | chr6_1:37565773-37565792 | Msa0884300:three_prime_UTR | 30.0% |
| TAAACAGACTAACTATTCCA+GGG | - | chr6_1:37566026-37566045 | None:intergenic | 30.0% | |
| TTAAACAGACTAACTATTCC+AGG | - | chr6_1:37566027-37566046 | None:intergenic | 30.0% | |
| ! | GGAATAGTTAGTCTGTTTAA+TGG | + | chr6_1:37566027-37566046 | Msa0884300:three_prime_UTR | 30.0% |
| TTGTTAAGTCTTCGTATCGT+AGG | - | chr6_1:37561204-37561223 | None:intergenic | 35.0% | |
| ATCTCAATGTCTTCGTTATC+GGG | + | chr6_1:37561271-37561290 | Msa0884300:exon | 35.0% | |
| ! | TGAAACATTTGAAGGCATGA+AGG | - | chr6_1:37561364-37561383 | None:intergenic | 35.0% |
| ! | ACTTTTCATGAATCCCTAAC+TGG | + | chr6_1:37561383-37561402 | Msa0884300:intron | 35.0% |
| ACACAGATCTAATCCAGTTA+GGG | - | chr6_1:37561399-37561418 | None:intergenic | 35.0% | |
| ! | TAAGAATGCTTTTGAGCCAT+TGG | + | chr6_1:37561644-37561663 | Msa0884300:intron | 35.0% |
| ! | GATTTTGAATGAGGGAGAAA+AGG | - | chr6_1:37561741-37561760 | None:intergenic | 35.0% |
| ! | CCCTCATTCAAAATCCTTTT+TGG | + | chr6_1:37561746-37561765 | Msa0884300:intron | 35.0% |
| TTTGGAGGACTAAAAGTTGA+AGG | + | chr6_1:37562233-37562252 | Msa0884300:intron | 35.0% | |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | + | chr6_1:37562596-37562615 | Msa0884300:intron | 35.0% |
| CAAGTTAGGAGATATTTAGC+TGG | - | chr6_1:37562823-37562842 | None:intergenic | 35.0% | |
| CAGCTAAATATCTCCTAACT+TGG | + | chr6_1:37562821-37562840 | Msa0884300:intron | 35.0% | |
| ! | AAACAAAAGGTGCAAAACCT+AGG | - | chr6_1:37562868-37562887 | None:intergenic | 35.0% |
| ! | GTTTTTCTATTGCTCGTGAT+TGG | + | chr6_1:37562884-37562903 | Msa0884300:CDS | 35.0% |
| ! | TTTTCTATTGCTCGTGATTG+GGG | + | chr6_1:37562886-37562905 | Msa0884300:CDS | 35.0% |
| TATGGACGAAAAGTTTGAAG+AGG | - | chr6_1:37562968-37562987 | None:intergenic | 35.0% | |
| TCCATATAACGTTGCACATA+GGG | + | chr6_1:37562982-37563001 | Msa0884300:CDS | 35.0% | |
| !!! | TTTTTTGCAGAGAGCTATTG+AGG | + | chr6_1:37563154-37563173 | Msa0884300:intron | 35.0% |
| AAGAACATATGAAGTCGAAG+GGG | + | chr6_1:37563301-37563320 | Msa0884300:CDS | 35.0% | |
| !! | ATTTCTAGTGACACGTATTC+TGG | + | chr6_1:37563464-37563483 | Msa0884300:intron | 35.0% |
| ! | ATTTGTTAAGAATGCCCAAG+AGG | - | chr6_1:37563532-37563551 | None:intergenic | 35.0% |
| TAAAGGAATTAAAGTCGCTG+AGG | + | chr6_1:37563831-37563850 | Msa0884300:CDS | 35.0% | |
| AAAGGAATTAAAGTCGCTGA+GGG | + | chr6_1:37563832-37563851 | Msa0884300:CDS | 35.0% | |
| CACATGTATAAGCGAAGAAA+AGG | - | chr6_1:37563904-37563923 | None:intergenic | 35.0% | |
| !! | AGCTCCGTCAGATTTTAAAA+TGG | + | chr6_1:37563928-37563947 | Msa0884300:intron | 35.0% |
| AAACACAAGTAATCAGCAGA+CGG | - | chr6_1:37563977-37563996 | None:intergenic | 35.0% | |
| TAGACTTAGCCATTTCAATG+CGG | - | chr6_1:37564013-37564032 | None:intergenic | 35.0% | |
| AGAGTTCATTACCATAGCAT+TGG | + | chr6_1:37564085-37564104 | Msa0884300:CDS | 35.0% | |
| GGATATATTCCAACAACTCT+GGG | - | chr6_1:37564116-37564135 | None:intergenic | 35.0% | |
| AGGATATATTCCAACAACTC+TGG | - | chr6_1:37564117-37564136 | None:intergenic | 35.0% | |
| ! | TGTCCCTTTAGCTTAAGTTT+AGG | + | chr6_1:37564330-37564349 | Msa0884300:intron | 35.0% |
| TTTGGAAGTTTCGAAAGATC+CGG | + | chr6_1:37564389-37564408 | Msa0884300:intron | 35.0% | |
| ATCCTCTCTTAGTAAAATGC+CGG | - | chr6_1:37564411-37564430 | None:intergenic | 35.0% | |
| ! | AGAGGATTTTTATCACCTGT+TGG | + | chr6_1:37564424-37564443 | Msa0884300:intron | 35.0% |
| ! | CTTTTAGTCCATTTCCTTAG+AGG | + | chr6_1:37564511-37564530 | Msa0884300:intron | 35.0% |
| GTTCATACCTGTCAAAACAT+TGG | + | chr6_1:37564643-37564662 | Msa0884300:CDS | 35.0% | |
| !!! | GTTTCAACCAATGTTTTGAC+AGG | - | chr6_1:37564653-37564672 | None:intergenic | 35.0% |
| GCAAATGACTGTATAAATGC+AGG | - | chr6_1:37564678-37564697 | None:intergenic | 35.0% | |
| TTCAACACAAGACACTAATC+AGG | + | chr6_1:37564770-37564789 | Msa0884300:CDS | 35.0% | |
| ACTAGTATAGTATCCTTCGA+AGG | - | chr6_1:37565036-37565055 | None:intergenic | 35.0% | |
| ! | ATCACATACTTGTTAACCAG+AGG | - | chr6_1:37565060-37565079 | None:intergenic | 35.0% |
| GACTGGCAATTTCATGTAAT+CGG | - | chr6_1:37565148-37565167 | None:intergenic | 35.0% | |
| ACGCCTTAATAGCTTCTATT+TGG | - | chr6_1:37565277-37565296 | None:intergenic | 35.0% | |
| TTGTGCTAAATGGCATATCA+CGG | - | chr6_1:37565340-37565359 | None:intergenic | 35.0% | |
| !! | ATGATTGTTGATGATGATGC+AGG | + | chr6_1:37565495-37565514 | Msa0884300:intron | 35.0% |
| TTCTCATTTCTGTACGTGTA+TGG | - | chr6_1:37565526-37565545 | None:intergenic | 35.0% | |
| CTTTAGTCAAGATCCTTACA+AGG | + | chr6_1:37565564-37565583 | Msa0884300:CDS | 35.0% | |
| CAGTAATCATACTCCTTGTA+AGG | - | chr6_1:37565580-37565599 | None:intergenic | 35.0% | |
| ! | CTTACAAGGAGTATGATTAC+TGG | + | chr6_1:37565578-37565597 | Msa0884300:CDS | 35.0% |
| ! | TGGGAGTCTTCATAATTTTC+AGG | + | chr6_1:37565642-37565661 | Msa0884300:CDS | 35.0% |
| !!! | TGATTTTTTGAGGTGTCACA+TGG | + | chr6_1:37565748-37565767 | Msa0884300:exon | 35.0% |
| GTATCGTAGGAACGTGAAAA+TGG | - | chr6_1:37561191-37561210 | None:intergenic | 40.0% | |
| GACACAGATCTAATCCAGTT+AGG | - | chr6_1:37561400-37561419 | None:intergenic | 40.0% | |
| ! | GCAGAAGCATGATATACCAA+CGG | - | chr6_1:37561422-37561441 | None:intergenic | 40.0% |
| GAGGGACTAAAACGAAAAGT+TGG | + | chr6_1:37562265-37562284 | Msa0884300:intron | 40.0% | |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | + | chr6_1:37562599-37562618 | Msa0884300:intron | 40.0% |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | + | chr6_1:37562600-37562619 | Msa0884300:intron | 40.0% |
| TTTCTATTGCTCGTGATTGG+GGG | + | chr6_1:37562887-37562906 | Msa0884300:CDS | 40.0% | |
| GTCCATATAACGTTGCACAT+AGG | + | chr6_1:37562981-37563000 | Msa0884300:CDS | 40.0% | |
| CCATATAACGTTGCACATAG+GGG | + | chr6_1:37562983-37563002 | Msa0884300:CDS | 40.0% | |
| ACTTGTATTGAACGTCCTCT+TGG | + | chr6_1:37563514-37563533 | Msa0884300:intron | 40.0% | |
| CTTGTATTGAACGTCCTCTT+GGG | + | chr6_1:37563515-37563534 | Msa0884300:intron | 40.0% | |
| TGAATCAGAGGTTCTGCTTT+AGG | + | chr6_1:37563855-37563874 | Msa0884300:CDS | 40.0% | |
| GAATCAGAGGTTCTGCTTTA+GGG | + | chr6_1:37563856-37563875 | Msa0884300:CDS | 40.0% | |
| AGACTTAGCCATTTCAATGC+GGG | - | chr6_1:37564012-37564031 | None:intergenic | 40.0% | |
| CACAGACAGAAGAAGTTCAT+TGG | - | chr6_1:37564194-37564213 | None:intergenic | 40.0% | |
| CAATGAACTTCTTCTGTCTG+TGG | + | chr6_1:37564192-37564211 | Msa0884300:intron | 40.0% | |
| ! | ATCCGGCATTTTACTAAGAG+AGG | + | chr6_1:37564406-37564425 | Msa0884300:intron | 40.0% |
| AAGAACAAGGGATAAGCCAA+AGG | - | chr6_1:37564812-37564831 | None:intergenic | 40.0% | |
| GGATACTATACTAGTACCTC+TGG | + | chr6_1:37565041-37565060 | Msa0884300:CDS | 40.0% | |
| CAAGTATGTGATGACTCCTT+CGG | + | chr6_1:37565068-37565087 | Msa0884300:CDS | 40.0% | |
| TGGCAACACTTTGTGCTAAA+TGG | - | chr6_1:37565350-37565369 | None:intergenic | 40.0% | |
| !! | CACAAAGTGTTGCCAAATAG+TGG | + | chr6_1:37565355-37565374 | Msa0884300:intron | 40.0% |
| ! | GAGCAAACCAGTATTTTCTG+CGG | + | chr6_1:37565407-37565426 | Msa0884300:intron | 40.0% |
| TATTGGACCGCAGAAAATAC+TGG | - | chr6_1:37565417-37565436 | None:intergenic | 40.0% | |
| TCGAGCAGTGTTGTCAATAT+TGG | - | chr6_1:37565434-37565453 | None:intergenic | 40.0% | |
| ACACGTACAGAAATGAGAAC+CGG | + | chr6_1:37565527-37565546 | Msa0884300:CDS | 40.0% | |
| GCCTGTTTACAGATTTCACT+GGG | + | chr6_1:37565623-37565642 | Msa0884300:CDS | 40.0% | |
| TCCCAGTGAAATCTGTAAAC+AGG | - | chr6_1:37565627-37565646 | None:intergenic | 40.0% | |
| TCTTGTCATCTTGACGGTTA+GGG | - | chr6_1:37565678-37565697 | None:intergenic | 40.0% | |
| ! | ATGCAGTCTTGTCATCTTGA+CGG | - | chr6_1:37565684-37565703 | None:intergenic | 40.0% |
| ATTAAAGTCGTTGCTTGCCG+CGG | - | chr6_1:37561162-37561181 | None:intergenic | 45.0% | |
| AACAATGACCTGAGTGAGTG+AGG | + | chr6_1:37561219-37561238 | Msa0884300:five_prime_UTR | 45.0% | |
| ! | TGGATTAGATCTGTGTCCGT+TGG | + | chr6_1:37561403-37561422 | Msa0884300:intron | 45.0% |
| AGAGGGACCAAAAGTGAAGA+TGG | + | chr6_1:37562204-37562223 | Msa0884300:intron | 45.0% | |
| GCACCCACCTAAAAACACTA+AGG | - | chr6_1:37562606-37562625 | None:intergenic | 45.0% | |
| TTGCCAGGAAGTGGATACAA+AGG | - | chr6_1:37562923-37562942 | None:intergenic | 45.0% | |
| TTGTATCCACTTCCTGGCAA+AGG | + | chr6_1:37562923-37562942 | Msa0884300:CDS | 45.0% | |
| CCCCTATGTGCAACGTTATA+TGG | - | chr6_1:37562986-37563005 | None:intergenic | 45.0% | |
| GTTGCACATAGGGGATCAAA+TGG | + | chr6_1:37562992-37563011 | Msa0884300:CDS | 45.0% | |
| TTGCAGAGAGCTATTGAGGA+AGG | + | chr6_1:37563158-37563177 | Msa0884300:intron | 45.0% | |
| ATGTGATGCCCGCATTGAAA+TGG | + | chr6_1:37564001-37564020 | Msa0884300:intron | 45.0% | |
| AAGAAAGCAGACAGCCTCTA+AGG | - | chr6_1:37564528-37564547 | None:intergenic | 45.0% | |
| TAACAGGTGAAATGGTCGGA+CGG | + | chr6_1:37564567-37564586 | Msa0884300:intron | 45.0% | |
| TGTAGGAATTGGACCTTCGA+AGG | + | chr6_1:37565020-37565039 | Msa0884300:CDS | 45.0% | |
| GGCCTGTTTACAGATTTCAC+TGG | + | chr6_1:37565622-37565641 | Msa0884300:CDS | 45.0% | |
| CTTGTCATCTTGACGGTTAG+GGG | - | chr6_1:37565677-37565696 | None:intergenic | 45.0% | |
| GTCTTGTCATCTTGACGGTT+AGG | - | chr6_1:37565679-37565698 | None:intergenic | 45.0% | |
| !! | ATATATATATATATATATAG+GGG | + | chr6_1:37561583-37561602 | Msa0884300:intron | 5.0% |
| !!! | AAAAAATTCTAATTTTTTTA+GGG | - | chr6_1:37562009-37562028 | None:intergenic | 5.0% |
| !!! | TAAAAAATTCTAATTTTTTT+AGG | - | chr6_1:37562010-37562029 | None:intergenic | 5.0% |
| !!! | TAAAAAATTTTGAATTTTTT+TGG | + | chr6_1:37562101-37562120 | Msa0884300:intron | 5.0% |
| !!! | AAAAAATTTTGAATTTTTTT+GGG | + | chr6_1:37562102-37562121 | Msa0884300:intron | 5.0% |
| !! | ATATATATATATATATATAG+GGG | + | chr6_1:37561583-37561602 | Msa0884300:intron | 5.0% |
| !!! | TAAACTTTATTTTAATTAAA+AGG | - | chr6_1:37562526-37562545 | None:intergenic | 5.0% |
| !! | TATATATATATATATATATG+GGG | - | chr6_1:37562319-37562338 | None:intergenic | 5.0% |
| AGGCCTTTGTATCCACTTCC+TGG | + | chr6_1:37562917-37562936 | Msa0884300:CDS | 50.0% | |
| GAAGAGGCTGCTTACTTCCA+TGG | - | chr6_1:37562952-37562971 | None:intergenic | 50.0% | |
| TATGCGTCGCGAGTTTCTTC+AGG | - | chr6_1:37563025-37563044 | None:intergenic | 50.0% | |
| AGAAACTCGCGACGCATATC+TGG | + | chr6_1:37563027-37563046 | Msa0884300:CDS | 50.0% | |
| TCTGGGTGCATCCAATGCTA+TGG | - | chr6_1:37564099-37564118 | None:intergenic | 50.0% | |
| TTGGATGCACCCAGAGTTGT+TGG | + | chr6_1:37564104-37564123 | Msa0884300:CDS | 50.0% | |
| ! | GCAGACAGCCTCTAAGGAAA+TGG | - | chr6_1:37564522-37564541 | None:intergenic | 50.0% |
| ACGGCAAACGATTTGAGGAC+AGG | + | chr6_1:37564586-37564605 | Msa0884300:CDS | 50.0% | |
| TCCTTCGGATCTTGTTGCCA+GGG | + | chr6_1:37565083-37565102 | Msa0884300:CDS | 50.0% | |
| CAGATTATGAGCATGTGCCC+TGG | - | chr6_1:37565103-37565122 | None:intergenic | 50.0% | |
| GGCACATGCTCATAATCTGC+AGG | + | chr6_1:37565104-37565123 | Msa0884300:CDS | 50.0% | |
| CCACGCAATCTTTCGAAGAC+TGG | - | chr6_1:37565165-37565184 | None:intergenic | 50.0% | |
| CCAGTCTTCGAAAGATTGCG+TGG | + | chr6_1:37565162-37565181 | Msa0884300:intron | 50.0% | |
| ! | AGTGCTGTTGGGCCACTATT+TGG | - | chr6_1:37565370-37565389 | None:intergenic | 50.0% |
| ! | TGCCATGCTACAGTGCTGTT+GGG | - | chr6_1:37565381-37565400 | None:intergenic | 50.0% |
| CGTTGCTTGCCGCGGAAATA+GGG | - | chr6_1:37561154-37561173 | None:intergenic | 55.0% | |
| TCGTTGCTTGCCGCGGAAAT+AGG | - | chr6_1:37561155-37561174 | None:intergenic | 55.0% | |
| GCTGTGTTCCTCACTCACTC+AGG | - | chr6_1:37561230-37561249 | None:intergenic | 55.0% | |
| ATTGCTCGTGATTGGGGGCA+CGG | + | chr6_1:37562892-37562911 | Msa0884300:CDS | 55.0% | |
| TGGTCACCTTTGCCAGGAAG+TGG | - | chr6_1:37562932-37562951 | None:intergenic | 55.0% | |
| CTTCCTGGCAAAGGTGACCA+TGG | + | chr6_1:37562932-37562951 | Msa0884300:CDS | 55.0% | |
| CTTCCATGGTCACCTTTGCC+AGG | - | chr6_1:37562938-37562957 | None:intergenic | 55.0% | |
| GTCGAAGGGGTCAATCACAC+TGG | + | chr6_1:37563314-37563333 | Msa0884300:CDS | 55.0% | |
| AGTCGCTGAGGGTGAATCAG+AGG | + | chr6_1:37563843-37563862 | Msa0884300:CDS | 55.0% | |
| GTCGGACGGCAAACGATTTG+AGG | + | chr6_1:37564581-37564600 | Msa0884300:CDS | 55.0% | |
| CTCCTTCGGATCTTGTTGCC+AGG | + | chr6_1:37565082-37565101 | Msa0884300:CDS | 55.0% | |
| CTGCCATGCTACAGTGCTGT+TGG | - | chr6_1:37565382-37565401 | None:intergenic | 55.0% | |
| GCCCTGGCAACAAGATCCGA+AGG | - | chr6_1:37565087-37565106 | None:intergenic | 60.0% | |
| GGCCCAACAGCACTGTAGCA+TGG | + | chr6_1:37565376-37565395 | Msa0884300:intron | 60.0% | |
| ! | TCGTGATTGGGGGCACGGCT+AGG | + | chr6_1:37562897-37562916 | Msa0884300:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 37561145 | 37566071 | 37561145 | ID=Msa0884300;Name=Msa0884300 |
| chr6_1 | mRNA | 37561145 | 37566071 | 37561145 | ID=Msa0884300-mRNA-1;Parent=Msa0884300;Name=Msa0884300-mRNA-1;_AED=0.04;_eAED=0.04;_QI=132|1|1|1|0.85|0.87|8|321|391 |
| chr6_1 | exon | 37561145 | 37561292 | 37561145 | ID=Msa0884300-mRNA-1:exon:8802;Parent=Msa0884300-mRNA-1 |
| chr6_1 | exon | 37562870 | 37563048 | 37562870 | ID=Msa0884300-mRNA-1:exon:8803;Parent=Msa0884300-mRNA-1 |
| chr6_1 | exon | 37563164 | 37563347 | 37563164 | ID=Msa0884300-mRNA-1:exon:8804;Parent=Msa0884300-mRNA-1 |
| chr6_1 | exon | 37563819 | 37563893 | 37563819 | ID=Msa0884300-mRNA-1:exon:8805;Parent=Msa0884300-mRNA-1 |
| chr6_1 | exon | 37564060 | 37564169 | 37564060 | ID=Msa0884300-mRNA-1:exon:8806;Parent=Msa0884300-mRNA-1 |
| chr6_1 | exon | 37564573 | 37564791 | 37564573 | ID=Msa0884300-mRNA-1:exon:8807;Parent=Msa0884300-mRNA-1 |
| chr6_1 | exon | 37564967 | 37565125 | 37564967 | ID=Msa0884300-mRNA-1:exon:8808;Parent=Msa0884300-mRNA-1 |
| chr6_1 | exon | 37565517 | 37566071 | 37565517 | ID=Msa0884300-mRNA-1:exon:8809;Parent=Msa0884300-mRNA-1 |
| chr6_1 | five_prime_UTR | 37561145 | 37561276 | 37561145 | ID=Msa0884300-mRNA-1:five_prime_utr;Parent=Msa0884300-mRNA-1 |
| chr6_1 | CDS | 37561277 | 37561292 | 37561277 | ID=Msa0884300-mRNA-1:cds;Parent=Msa0884300-mRNA-1 |
| chr6_1 | CDS | 37562870 | 37563048 | 37562870 | ID=Msa0884300-mRNA-1:cds;Parent=Msa0884300-mRNA-1 |
| chr6_1 | CDS | 37563164 | 37563347 | 37563164 | ID=Msa0884300-mRNA-1:cds;Parent=Msa0884300-mRNA-1 |
| chr6_1 | CDS | 37563819 | 37563893 | 37563819 | ID=Msa0884300-mRNA-1:cds;Parent=Msa0884300-mRNA-1 |
| chr6_1 | CDS | 37564060 | 37564169 | 37564060 | ID=Msa0884300-mRNA-1:cds;Parent=Msa0884300-mRNA-1 |
| chr6_1 | CDS | 37564573 | 37564791 | 37564573 | ID=Msa0884300-mRNA-1:cds;Parent=Msa0884300-mRNA-1 |
| chr6_1 | CDS | 37564967 | 37565125 | 37564967 | ID=Msa0884300-mRNA-1:cds;Parent=Msa0884300-mRNA-1 |
| chr6_1 | CDS | 37565517 | 37565750 | 37565517 | ID=Msa0884300-mRNA-1:cds;Parent=Msa0884300-mRNA-1 |
| chr6_1 | three_prime_UTR | 37565751 | 37566071 | 37565751 | ID=Msa0884300-mRNA-1:three_prime_utr;Parent=Msa0884300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
