Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1186260 | XP_013445083.1 | 97.125 | 313 | 9 | 0 | 1 | 313 | 1 | 313 | 0.0 | 622 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1186260 | sp|P51074|ANX4_FRAAN | 68.153 | 314 | 99 | 1 | 1 | 313 | 1 | 314 | 2.03e-157 | 445 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004590 | Msa1186260 | 0.817279 | 3.580017e-52 | -8.615850e-47 |
Msa0009530 | Msa1186260 | -0.810206 | 1.293303e-50 | -8.615850e-47 |
Msa0011060 | Msa1186260 | -0.809702 | 1.660296e-50 | -8.615850e-47 |
Msa0011100 | Msa1186260 | -0.819233 | 1.293518e-52 | -8.615850e-47 |
Msa0013270 | Msa1186260 | 0.808718 | 2.698254e-50 | -8.615850e-47 |
Msa0024650 | Msa1186260 | 0.802531 | 5.367999e-49 | -8.615850e-47 |
Msa0025700 | Msa1186260 | 0.827793 | 1.285675e-54 | -8.615850e-47 |
Msa0032130 | Msa1186260 | 0.803220 | 3.867769e-49 | -8.615850e-47 |
Msa0032390 | Msa1186260 | 0.828896 | 6.965513e-55 | -8.615850e-47 |
Msa0036550 | Msa1186260 | 0.804384 | 2.216796e-49 | -8.615850e-47 |
Msa0043150 | Msa1186260 | 0.800691 | 1.279760e-48 | -8.615850e-47 |
Msa0045620 | Msa1186260 | 0.836021 | 1.194245e-56 | -8.615850e-47 |
Msa0048410 | Msa1186260 | -0.817257 | 3.622798e-52 | -8.615850e-47 |
Msa0060080 | Msa1186260 | -0.802827 | 4.663492e-49 | -8.615850e-47 |
Msa0069480 | Msa1186260 | 0.806630 | 7.493082e-50 | -8.615850e-47 |
Msa0073270 | Msa1186260 | 0.804446 | 2.151542e-49 | -8.615850e-47 |
Msa0073280 | Msa1186260 | 0.807439 | 5.051384e-50 | -8.615850e-47 |
Msa0081290 | Msa1186260 | -0.816772 | 4.654273e-52 | -8.615850e-47 |
Msa0089540 | Msa1186260 | 0.802476 | 5.511129e-49 | -8.615850e-47 |
Msa0099090 | Msa1186260 | -0.810172 | 1.315600e-50 | -8.615850e-47 |
Msa0100890 | Msa1186260 | 0.809425 | 1.904759e-50 | -8.615850e-47 |
Msa0102920 | Msa1186260 | 0.818276 | 2.132482e-52 | -8.615850e-47 |
Msa0106540 | Msa1186260 | 0.810086 | 1.372580e-50 | -8.615850e-47 |
Msa0612880 | Msa1186260 | -0.812471 | 4.169948e-51 | -8.615850e-47 |
Msa0623310 | Msa1186260 | 0.832787 | 7.744376e-56 | -8.615850e-47 |
Msa0623980 | Msa1186260 | 0.800527 | 1.382019e-48 | -8.615850e-47 |
Msa0624930 | Msa1186260 | 0.871059 | 9.114163e-67 | -8.615850e-47 |
Msa0626980 | Msa1186260 | 0.858053 | 1.072265e-62 | -8.615850e-47 |
Msa0627360 | Msa1186260 | 0.861321 | 1.113889e-63 | -8.615850e-47 |
Msa0647300 | Msa1186260 | 0.803474 | 3.426092e-49 | -8.615850e-47 |
Msa0651090 | Msa1186260 | 0.800004 | 1.766558e-48 | -8.615850e-47 |
Msa0658120 | Msa1186260 | 0.848277 | 6.790955e-60 | -8.615850e-47 |
Msa0659020 | Msa1186260 | -0.834069 | 3.709371e-56 | -8.615850e-47 |
Msa0667600 | Msa1186260 | 0.808718 | 2.699023e-50 | -8.615850e-47 |
Msa0671400 | Msa1186260 | 0.872094 | 4.139581e-67 | -8.615850e-47 |
Msa0673940 | Msa1186260 | 0.870002 | 2.027058e-66 | -8.615850e-47 |
Msa0678620 | Msa1186260 | 0.806064 | 9.859980e-50 | -8.615850e-47 |
Msa0685390 | Msa1186260 | -0.825920 | 3.603499e-54 | -8.615850e-47 |
Msa0686830 | Msa1186260 | 0.803778 | 2.963440e-49 | -8.615850e-47 |
Msa0702970 | Msa1186260 | 0.843120 | 1.703248e-58 | -8.615850e-47 |
Msa0706690 | Msa1186260 | 0.808441 | 3.091757e-50 | -8.615850e-47 |
Msa0708020 | Msa1186260 | 0.802209 | 6.252878e-49 | -8.615850e-47 |
Msa0716700 | Msa1186260 | 0.883415 | 4.575330e-71 | -8.615850e-47 |
Msa0716980 | Msa1186260 | 0.812398 | 4.326366e-51 | -8.615850e-47 |
Msa0727480 | Msa1186260 | 0.800490 | 1.406445e-48 | -8.615850e-47 |
Msa0732970 | Msa1186260 | 0.826458 | 2.682894e-54 | -8.615850e-47 |
Msa0733240 | Msa1186260 | -0.807398 | 5.154588e-50 | -8.615850e-47 |
Msa0754750 | Msa1186260 | 0.807483 | 4.943586e-50 | -8.615850e-47 |
Msa0756670 | Msa1186260 | -0.817386 | 3.387243e-52 | -8.615850e-47 |
Msa0761830 | Msa1186260 | 0.828112 | 1.077592e-54 | -8.615850e-47 |
Msa0772420 | Msa1186260 | 0.879031 | 1.736533e-69 | -8.615850e-47 |
Msa0773960 | Msa1186260 | 0.810904 | 9.141395e-51 | -8.615850e-47 |
Msa0774360 | Msa1186260 | -0.804507 | 2.089335e-49 | -8.615850e-47 |
Msa0795210 | Msa1186260 | 0.802284 | 6.033783e-49 | -8.615850e-47 |
Msa0797980 | Msa1186260 | -0.808058 | 3.731994e-50 | -8.615850e-47 |
Msa0804170 | Msa1186260 | 0.843420 | 1.416836e-58 | -8.615850e-47 |
Msa0828350 | Msa1186260 | 0.816848 | 4.474694e-52 | -8.615850e-47 |
Msa0836060 | Msa1186260 | -0.816266 | 6.041199e-52 | -8.615850e-47 |
Msa0121320 | Msa1186260 | 0.804740 | 1.868604e-49 | -8.615850e-47 |
Msa0131460 | Msa1186260 | 0.806357 | 8.556669e-50 | -8.615850e-47 |
Msa0132080 | Msa1186260 | -0.806503 | 7.970786e-50 | -8.615850e-47 |
Msa0136090 | Msa1186260 | 0.804444 | 2.154235e-49 | -8.615850e-47 |
Msa0147680 | Msa1186260 | 0.831554 | 1.563326e-55 | -8.615850e-47 |
Msa0158760 | Msa1186260 | 0.807800 | 4.235544e-50 | -8.615850e-47 |
Msa0166180 | Msa1186260 | 0.804760 | 1.850281e-49 | -8.615850e-47 |
Msa0176600 | Msa1186260 | 0.800413 | 1.458026e-48 | -8.615850e-47 |
Msa0185690 | Msa1186260 | 0.810597 | 1.064754e-50 | -8.615850e-47 |
Msa0189150 | Msa1186260 | -0.826444 | 2.704306e-54 | -8.615850e-47 |
Msa0190890 | Msa1186260 | 0.806713 | 7.197646e-50 | -8.615850e-47 |
Msa0191100 | Msa1186260 | 0.835747 | 1.401295e-56 | -8.615850e-47 |
Msa0197920 | Msa1186260 | 0.846951 | 1.572725e-59 | -8.615850e-47 |
Msa0206370 | Msa1186260 | 0.832036 | 1.188676e-55 | -8.615850e-47 |
Msa0210790 | Msa1186260 | 0.825302 | 5.047451e-54 | -8.615850e-47 |
Msa0210850 | Msa1186260 | 0.820552 | 6.456785e-53 | -8.615850e-47 |
Msa0211460 | Msa1186260 | 0.838738 | 2.405895e-57 | -8.615850e-47 |
Msa0219840 | Msa1186260 | 0.823364 | 1.441485e-53 | -8.615850e-47 |
Msa0225070 | Msa1186260 | -0.815681 | 8.163439e-52 | -8.615850e-47 |
Msa0233210 | Msa1186260 | 0.800359 | 1.495761e-48 | -8.615850e-47 |
Msa0235080 | Msa1186260 | 0.847584 | 1.054538e-59 | -8.615850e-47 |
Msa0236690 | Msa1186260 | -0.801291 | 9.648564e-49 | -8.615850e-47 |
Msa0364910 | Msa1186260 | -0.825144 | 5.503035e-54 | -8.615850e-47 |
Msa0372100 | Msa1186260 | 0.829937 | 3.892194e-55 | -8.615850e-47 |
Msa0373550 | Msa1186260 | 0.810302 | 1.233127e-50 | -8.615850e-47 |
Msa0374560 | Msa1186260 | 0.804971 | 1.672012e-49 | -8.615850e-47 |
Msa0379480 | Msa1186260 | 0.819233 | 1.293389e-52 | -8.615850e-47 |
Msa0387890 | Msa1186260 | 0.829479 | 5.030109e-55 | -8.615850e-47 |
Msa0403740 | Msa1186260 | -0.820896 | 5.383704e-53 | -8.615850e-47 |
Msa0404140 | Msa1186260 | 0.816998 | 4.141645e-52 | -8.615850e-47 |
Msa0415010 | Msa1186260 | 0.804111 | 2.526818e-49 | -8.615850e-47 |
Msa0419420 | Msa1186260 | -0.809944 | 1.472817e-50 | -8.615850e-47 |
Msa0421290 | Msa1186260 | 0.813168 | 2.933848e-51 | -8.615850e-47 |
Msa0421320 | Msa1186260 | 0.808827 | 2.558131e-50 | -8.615850e-47 |
Msa0425950 | Msa1186260 | 0.804341 | 2.262579e-49 | -8.615850e-47 |
Msa0426030 | Msa1186260 | 0.801305 | 9.586217e-49 | -8.615850e-47 |
Msa0426170 | Msa1186260 | 0.822354 | 2.477347e-53 | -8.615850e-47 |
Msa0427260 | Msa1186260 | -0.802776 | 4.778808e-49 | -8.615850e-47 |
Msa0432260 | Msa1186260 | -0.833045 | 6.682637e-56 | -8.615850e-47 |
Msa0444200 | Msa1186260 | 0.801398 | 9.176642e-49 | -8.615850e-47 |
Msa0444210 | Msa1186260 | 0.837472 | 5.094670e-57 | -8.615850e-47 |
Msa0444380 | Msa1186260 | 0.801208 | 1.003538e-48 | -8.615850e-47 |
Msa0452490 | Msa1186260 | -0.807754 | 4.331245e-50 | -8.615850e-47 |
Msa0452770 | Msa1186260 | 0.801477 | 8.841693e-49 | -8.615850e-47 |
Msa0456450 | Msa1186260 | -0.813177 | 2.921127e-51 | -8.615850e-47 |
Msa0467250 | Msa1186260 | 0.846399 | 2.225763e-59 | -8.615850e-47 |
Msa0471130 | Msa1186260 | -0.805349 | 1.393580e-49 | -8.615850e-47 |
Msa0472390 | Msa1186260 | 0.810356 | 1.200549e-50 | -8.615850e-47 |
Msa0475330 | Msa1186260 | 0.800338 | 1.510568e-48 | -8.615850e-47 |
Msa0476730 | Msa1186260 | -0.803151 | 3.997711e-49 | -8.615850e-47 |
Msa0982560 | Msa1186260 | 0.812907 | 3.346669e-51 | -8.615850e-47 |
Msa0987670 | Msa1186260 | 0.830925 | 2.231081e-55 | -8.615850e-47 |
Msa1003110 | Msa1186260 | 0.801479 | 8.831088e-49 | -8.615850e-47 |
Msa1014550 | Msa1186260 | -0.802945 | 4.408267e-49 | -8.615850e-47 |
Msa1026710 | Msa1186260 | 0.817234 | 3.665629e-52 | -8.615850e-47 |
Msa1036020 | Msa1186260 | 0.803265 | 3.785174e-49 | -8.615850e-47 |
Msa1041060 | Msa1186260 | 0.805618 | 1.223883e-49 | -8.615850e-47 |
Msa1041910 | Msa1186260 | 0.807332 | 5.322830e-50 | -8.615850e-47 |
Msa1043020 | Msa1186260 | -0.808524 | 2.969330e-50 | -8.615850e-47 |
Msa1050540 | Msa1186260 | -0.808295 | 3.321608e-50 | -8.615850e-47 |
Msa1061670 | Msa1186260 | 0.803903 | 2.791583e-49 | -8.615850e-47 |
Msa1061760 | Msa1186260 | 0.811022 | 8.617215e-51 | -8.615850e-47 |
Msa1070630 | Msa1186260 | -0.834115 | 3.612720e-56 | -8.615850e-47 |
Msa1074560 | Msa1186260 | 0.814100 | 1.829691e-51 | -8.615850e-47 |
Msa1076830 | Msa1186260 | 0.808088 | 3.677212e-50 | -8.615850e-47 |
Msa1078300 | Msa1186260 | 0.838553 | 2.686042e-57 | -8.615850e-47 |
Msa1078590 | Msa1186260 | -0.811922 | 5.495125e-51 | -8.615850e-47 |
Msa1078760 | Msa1186260 | -0.811980 | 5.336005e-51 | -8.615850e-47 |
Msa1085560 | Msa1186260 | 0.814672 | 1.367613e-51 | -8.615850e-47 |
Msa1088260 | Msa1186260 | 0.826191 | 3.105890e-54 | -8.615850e-47 |
Msa1088740 | Msa1186260 | -0.802025 | 6.822395e-49 | -8.615850e-47 |
Msa1093190 | Msa1186260 | -0.832650 | 8.374536e-56 | -8.615850e-47 |
Msa1096520 | Msa1186260 | -0.800380 | 1.481105e-48 | -8.615850e-47 |
Msa1096570 | Msa1186260 | -0.805570 | 1.252271e-49 | -8.615850e-47 |
Msa1106960 | Msa1186260 | 0.801024 | 1.094531e-48 | -8.615850e-47 |
Msa0251120 | Msa1186260 | 0.802384 | 5.756214e-49 | -8.615850e-47 |
Msa0260980 | Msa1186260 | 0.843226 | 1.595932e-58 | -8.615850e-47 |
Msa0266140 | Msa1186260 | -0.816699 | 4.833219e-52 | -8.615850e-47 |
Msa0267710 | Msa1186260 | 0.823842 | 1.114228e-53 | -8.615850e-47 |
Msa0270730 | Msa1186260 | -0.808483 | 3.029129e-50 | -8.615850e-47 |
Msa0273360 | Msa1186260 | 0.813057 | 3.102544e-51 | -8.615850e-47 |
Msa0277320 | Msa1186260 | 0.831669 | 1.464229e-55 | -8.615850e-47 |
Msa0278480 | Msa1186260 | 0.820929 | 5.290397e-53 | -8.615850e-47 |
Msa0290800 | Msa1186260 | 0.861741 | 8.288967e-64 | -8.615850e-47 |
Msa0297270 | Msa1186260 | -0.801586 | 8.398151e-49 | -8.615850e-47 |
Msa0304060 | Msa1186260 | -0.814243 | 1.701677e-51 | -8.615850e-47 |
Msa0311540 | Msa1186260 | 0.829253 | 5.707227e-55 | -8.615850e-47 |
Msa0313620 | Msa1186260 | 0.802147 | 6.441222e-49 | -8.615850e-47 |
Msa0317300 | Msa1186260 | 0.849203 | 3.760574e-60 | -8.615850e-47 |
Msa0328870 | Msa1186260 | 0.867389 | 1.419267e-65 | -8.615850e-47 |
Msa0336430 | Msa1186260 | 0.805782 | 1.130482e-49 | -8.615850e-47 |
Msa0336460 | Msa1186260 | 0.827930 | 1.191674e-54 | -8.615850e-47 |
Msa0336520 | Msa1186260 | 0.831932 | 1.260781e-55 | -8.615850e-47 |
Msa0349910 | Msa1186260 | 0.809542 | 1.797691e-50 | -8.615850e-47 |
Msa0349930 | Msa1186260 | 0.820638 | 6.170437e-53 | -8.615850e-47 |
Msa0354550 | Msa1186260 | 0.825112 | 5.598690e-54 | -8.615850e-47 |
Msa0358470 | Msa1186260 | 0.801594 | 8.363552e-49 | -8.615850e-47 |
Msa0364030 | Msa1186260 | -0.820693 | 5.994232e-53 | -8.615850e-47 |
Msa1109500 | Msa1186260 | -0.811531 | 6.681121e-51 | -8.615850e-47 |
Msa1127200 | Msa1186260 | 0.849301 | 3.530551e-60 | -8.615850e-47 |
Msa1130770 | Msa1186260 | 0.807320 | 5.354441e-50 | -8.615850e-47 |
Msa1145430 | Msa1186260 | -0.813177 | 2.920941e-51 | -8.615850e-47 |
Msa1145930 | Msa1186260 | -0.800210 | 1.603462e-48 | -8.615850e-47 |
Msa1146980 | Msa1186260 | 0.822082 | 2.865268e-53 | -8.615850e-47 |
Msa1150860 | Msa1186260 | 0.826473 | 2.660809e-54 | -8.615850e-47 |
Msa1150870 | Msa1186260 | 0.802653 | 5.066701e-49 | -8.615850e-47 |
Msa1158450 | Msa1186260 | -0.825497 | 4.539592e-54 | -8.615850e-47 |
Msa1165460 | Msa1186260 | 0.819623 | 1.054106e-52 | -8.615850e-47 |
Msa1169590 | Msa1186260 | -0.812333 | 4.469706e-51 | -8.615850e-47 |
Msa1170320 | Msa1186260 | 0.811982 | 5.330212e-51 | -8.615850e-47 |
Msa1184680 | Msa1186260 | 0.800881 | 1.170581e-48 | -8.615850e-47 |
Msa1186260 | Msa1190350 | -0.807941 | 3.952509e-50 | -8.615850e-47 |
Msa1186260 | Msa1205270 | -0.812233 | 4.698970e-51 | -8.615850e-47 |
Msa1186260 | Msa1214960 | 0.812330 | 4.475890e-51 | -8.615850e-47 |
Msa1186260 | Msa1220720 | 0.825489 | 4.559889e-54 | -8.615850e-47 |
Msa1186260 | Msa1225890 | 0.804832 | 1.787196e-49 | -8.615850e-47 |
Msa1186260 | Msa1255710 | 0.801147 | 1.032701e-48 | -8.615850e-47 |
Msa1186260 | Msa1259570 | 0.800622 | 1.321877e-48 | -8.615850e-47 |
Msa1186260 | Msa1263110 | 0.802364 | 5.811810e-49 | -8.615850e-47 |
Msa1186260 | Msa1265570 | 0.826250 | 3.007729e-54 | -8.615850e-47 |
Msa1186260 | Msa1273320 | 0.813037 | 3.134231e-51 | -8.615850e-47 |
Msa1186260 | Msa1281370 | 0.800796 | 1.218045e-48 | -8.615850e-47 |
Msa1186260 | Msa1281780 | 0.871315 | 7.502137e-67 | -8.615850e-47 |
Msa1186260 | Msa1286860 | -0.803023 | 4.248682e-49 | -8.615850e-47 |
Msa1186260 | Msa1290090 | -0.804602 | 1.996648e-49 | -8.615850e-47 |
Msa1186260 | Msa1297220 | -0.816680 | 4.882181e-52 | -8.615850e-47 |
Msa1186260 | Msa1321010 | 0.887552 | 1.291303e-72 | -8.615850e-47 |
Msa1186260 | Msa1323260 | -0.821655 | 3.596464e-53 | -8.615850e-47 |
Msa1186260 | Msa1334670 | 0.819305 | 1.245408e-52 | -8.615850e-47 |
Msa1186260 | Msa1342360 | -0.812661 | 3.788752e-51 | -8.615850e-47 |
Msa1186260 | Msa1343450 | -0.809905 | 1.501448e-50 | -8.615850e-47 |
Msa1186260 | Msa1357490 | 0.806037 | 9.989842e-50 | -8.615850e-47 |
Msa1186260 | Msa1361980 | 0.812639 | 3.832474e-51 | -8.615850e-47 |
Msa1186260 | Msa1362590 | 0.816706 | 4.816562e-52 | -8.615850e-47 |
Msa1186260 | Msa1365130 | -0.802554 | 5.309454e-49 | -8.615850e-47 |
Msa1186260 | Msa1365230 | 0.823181 | 1.590431e-53 | -8.615850e-47 |
Msa1186260 | Msa1365850 | 0.802511 | 5.420114e-49 | -8.615850e-47 |
Msa1186260 | Msa1371270 | 0.800128 | 1.666580e-48 | -8.615850e-47 |
Msa1186260 | Msa1371800 | 0.841023 | 6.109044e-58 | -8.615850e-47 |
Msa1186260 | Msa1373560 | 0.822009 | 2.978980e-53 | -8.615850e-47 |
Msa1186260 | Msa1376070 | 0.810434 | 1.154669e-50 | -8.615850e-47 |
Msa1186260 | Msa1376310 | 0.841743 | 3.949245e-58 | -8.615850e-47 |
Msa1186260 | Msa1377520 | 0.824319 | 8.607654e-54 | -8.615850e-47 |
Msa1186260 | Msa1379270 | -0.804300 | 2.307932e-49 | -8.615850e-47 |
Msa1186260 | Msa1380740 | 0.828308 | 9.665367e-55 | -8.615850e-47 |
Msa1186260 | Msa1384410 | -0.803556 | 3.294497e-49 | -8.615850e-47 |
Msa1186260 | Msa1385570 | 0.804407 | 2.192226e-49 | -8.615850e-47 |
Msa1186260 | Msa1395050 | 0.840049 | 1.098979e-57 | -8.615850e-47 |
Msa1186260 | Msa1395720 | 0.800344 | 1.506277e-48 | -8.615850e-47 |
Msa1186260 | Msa1398490 | 0.805953 | 1.040767e-49 | -8.615850e-47 |
Msa1186260 | Msa1405830 | 0.812820 | 3.497225e-51 | -8.615850e-47 |
Msa1186260 | Msa1407670 | 0.836087 | 1.149016e-56 | -8.615850e-47 |
Msa1186260 | Msa1407810 | 0.821101 | 4.828270e-53 | -8.615850e-47 |
Msa1186260 | Msa1409060 | 0.804019 | 2.640304e-49 | -8.615850e-47 |
Msa1186260 | Msa1412740 | -0.816020 | 6.857270e-52 | -8.615850e-47 |
Msa1186260 | Msa1413020 | 0.840706 | 7.397931e-58 | -8.615850e-47 |
Msa1186260 | Msa1417220 | 0.800047 | 1.730761e-48 | -8.615850e-47 |
Msa1186260 | Msa1421130 | 0.829835 | 4.120889e-55 | -8.615850e-47 |
Msa1186260 | Msa1421540 | 0.839417 | 1.604568e-57 | -8.615850e-47 |
Msa1186260 | Msa1422150 | -0.825760 | 3.932235e-54 | -8.615850e-47 |
Msa1186260 | Msa1430250 | 0.846116 | 2.657356e-59 | -8.615850e-47 |
Msa1186260 | Msa1434700 | 0.815039 | 1.133753e-51 | -8.615850e-47 |
Msa1186260 | Msa1437780 | 0.820868 | 5.463139e-53 | -8.615850e-47 |
Msa1186260 | Msa1438510 | 0.800613 | 1.327329e-48 | -8.615850e-47 |
Msa1186260 | Msa1444660 | 0.801408 | 9.133621e-49 | -8.615850e-47 |
Msa1186260 | Msa1447900 | 0.821474 | 3.960655e-53 | -8.615850e-47 |
Msa1186260 | Msa1449770 | 0.837995 | 3.738929e-57 | -8.615850e-47 |
Msa1186260 | Msa1451660 | 0.808104 | 3.648809e-50 | -8.615850e-47 |
Msa1186260 | Msa1457850 | 0.812747 | 3.629452e-51 | -8.615850e-47 |
Msa1186260 | Msa1459610 | 0.816967 | 4.208479e-52 | -8.615850e-47 |
Msa1186260 | Msa1461660 | 0.813741 | 2.195501e-51 | -8.615850e-47 |
Msa1186260 | Msa1462780 | 0.812532 | 4.043827e-51 | -8.615850e-47 |
Msa1186260 | Msa1464470 | -0.804477 | 2.120373e-49 | -8.615850e-47 |
Msa0482760 | Msa1186260 | 0.819132 | 1.363871e-52 | -8.615850e-47 |
Msa0484410 | Msa1186260 | 0.817822 | 2.701028e-52 | -8.615850e-47 |
Msa0491770 | Msa1186260 | 0.821823 | 3.288985e-53 | -8.615850e-47 |
Msa0496070 | Msa1186260 | 0.813771 | 2.162376e-51 | -8.615850e-47 |
Msa0513580 | Msa1186260 | -0.809464 | 1.868154e-50 | -8.615850e-47 |
Msa0514540 | Msa1186260 | 0.818408 | 1.991162e-52 | -8.615850e-47 |
Msa0525400 | Msa1186260 | 0.816025 | 6.840356e-52 | -8.615850e-47 |
Msa0527560 | Msa1186260 | 0.845292 | 4.447045e-59 | -8.615850e-47 |
Msa0529360 | Msa1186260 | 0.874644 | 5.748722e-68 | -8.615850e-47 |
Msa0530660 | Msa1186260 | 0.861984 | 6.982904e-64 | -8.615850e-47 |
Msa0538050 | Msa1186260 | -0.803442 | 3.478756e-49 | -8.615850e-47 |
Msa0540160 | Msa1186260 | -0.800493 | 1.404280e-48 | -8.615850e-47 |
Msa0562050 | Msa1186260 | 0.801219 | 9.984667e-49 | -8.615850e-47 |
Msa0566460 | Msa1186260 | 0.863119 | 3.125466e-64 | -8.615850e-47 |
Msa0566930 | Msa1186260 | 0.805520 | 1.282986e-49 | -8.615850e-47 |
Msa0567330 | Msa1186260 | 0.819430 | 1.166567e-52 | -8.615850e-47 |
Msa0567570 | Msa1186260 | 0.823018 | 1.736080e-53 | -8.615850e-47 |
Msa0568460 | Msa1186260 | -0.823665 | 1.225842e-53 | -8.615850e-47 |
Msa0575950 | Msa1186260 | 0.817166 | 3.795937e-52 | -8.615850e-47 |
Msa0576320 | Msa1186260 | 0.820233 | 7.642045e-53 | -8.615850e-47 |
Msa0576500 | Msa1186260 | -0.811955 | 5.402974e-51 | -8.615850e-47 |
Msa0583390 | Msa1186260 | 0.806713 | 7.196052e-50 | -8.615850e-47 |
Msa0584970 | Msa1186260 | 0.829498 | 4.977362e-55 | -8.615850e-47 |
Msa0587180 | Msa1186260 | 0.867534 | 1.275350e-65 | -8.615850e-47 |
Msa0587920 | Msa1186260 | 0.812699 | 3.716684e-51 | -8.615850e-47 |
Msa0595530 | Msa1186260 | 0.825954 | 3.537086e-54 | -8.615850e-47 |
Msa0602050 | Msa1186260 | 0.824239 | 8.990635e-54 | -8.615850e-47 |
Msa0846900 | Msa1186260 | 0.811314 | 7.447217e-51 | -8.615850e-47 |
Msa0847140 | Msa1186260 | 0.803479 | 3.418898e-49 | -8.615850e-47 |
Msa0851760 | Msa1186260 | 0.818272 | 2.137621e-52 | -8.615850e-47 |
Msa0852090 | Msa1186260 | -0.826521 | 2.592626e-54 | -8.615850e-47 |
Msa0852620 | Msa1186260 | 0.809623 | 1.726592e-50 | -8.615850e-47 |
Msa0862230 | Msa1186260 | -0.818458 | 1.940178e-52 | -8.615850e-47 |
Msa0869660 | Msa1186260 | 0.812506 | 4.095930e-51 | -8.615850e-47 |
Msa0871420 | Msa1186260 | 0.838976 | 2.088294e-57 | -8.615850e-47 |
Msa0880910 | Msa1186260 | 0.801495 | 8.764602e-49 | -8.615850e-47 |
Msa0893840 | Msa1186260 | 0.802672 | 5.019718e-49 | -8.615850e-47 |
Msa0898830 | Msa1186260 | -0.802440 | 5.604145e-49 | -8.615850e-47 |
Msa0902340 | Msa1186260 | 0.821829 | 3.278427e-53 | -8.615850e-47 |
Msa0903460 | Msa1186260 | -0.800871 | 1.176127e-48 | -8.615850e-47 |
Msa0907840 | Msa1186260 | 0.821275 | 4.402256e-53 | -8.615850e-47 |
Msa0910830 | Msa1186260 | 0.805633 | 1.215166e-49 | -8.615850e-47 |
Msa0913520 | Msa1186260 | 0.805146 | 1.537032e-49 | -8.615850e-47 |
Msa0921340 | Msa1186260 | 0.807619 | 4.627718e-50 | -8.615850e-47 |
Msa0921860 | Msa1186260 | 0.809127 | 2.206354e-50 | -8.615850e-47 |
Msa0925330 | Msa1186260 | 0.801791 | 7.622246e-49 | -8.615850e-47 |
Msa0931370 | Msa1186260 | 0.800304 | 1.534903e-48 | -8.615850e-47 |
Msa0932140 | Msa1186260 | 0.824012 | 1.016508e-53 | -8.615850e-47 |
Msa0932150 | Msa1186260 | 0.823056 | 1.700741e-53 | -8.615850e-47 |
Msa0935930 | Msa1186260 | -0.808848 | 2.531653e-50 | -8.615850e-47 |
Msa0936630 | Msa1186260 | 0.829738 | 4.351666e-55 | -8.615850e-47 |
Msa0959850 | Msa1186260 | 0.807348 | 5.280724e-50 | -8.615850e-47 |
Msa0966120 | Msa1186260 | 0.805722 | 1.163611e-49 | -8.615850e-47 |
Msa0967900 | Msa1186260 | -0.817815 | 2.711629e-52 | -8.615850e-47 |
Msa0970270 | Msa1186260 | 0.845810 | 3.218508e-59 | -8.615850e-47 |
Msa0973770 | Msa1186260 | 0.835567 | 1.556539e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1186260 | MtrunA17_Chr8g0352611 | 97.125 | 313 | 9 | 0 | 1 | 313 | 1 | 313 | 0.0 | 622 |
Msa1186260 | MtrunA17_Chr8g0352621 | 76.752 | 314 | 71 | 2 | 1 | 313 | 1 | 313 | 1.74e-176 | 490 |
Msa1186260 | MtrunA17_Chr3g0083901 | 71.975 | 314 | 87 | 1 | 1 | 313 | 1 | 314 | 1.50e-167 | 468 |
Msa1186260 | MtrunA17_Chr3g0083921 | 68.153 | 314 | 99 | 1 | 1 | 313 | 1 | 314 | 1.04e-158 | 445 |
Msa1186260 | MtrunA17_Chr8g0352591 | 68.590 | 312 | 86 | 2 | 1 | 311 | 1 | 301 | 1.63e-149 | 421 |
Msa1186260 | MtrunA17_Chr8g0382281 | 51.429 | 315 | 151 | 2 | 1 | 313 | 1 | 315 | 7.52e-102 | 301 |
Msa1186260 | MtrunA17_Chr2g0293441 | 44.409 | 313 | 173 | 1 | 1 | 312 | 1 | 313 | 6.66e-97 | 288 |
Msa1186260 | MtrunA17_Chr5g0425971 | 47.115 | 312 | 163 | 2 | 1 | 310 | 1 | 312 | 2.74e-96 | 287 |
Msa1186260 | MtrunA17_Chr8g0352571 | 40.823 | 316 | 182 | 2 | 1 | 311 | 1 | 316 | 4.28e-77 | 238 |
Msa1186260 | MtrunA17_Chr8g0393281 | 37.143 | 315 | 196 | 2 | 1 | 313 | 1 | 315 | 1.10e-69 | 219 |
Msa1186260 | MtrunA17_Chr1g0162071 | 37.460 | 315 | 193 | 4 | 1 | 312 | 1 | 314 | 5.46e-66 | 209 |
Msa1186260 | MtrunA17_Chr6g0479411 | 37.821 | 312 | 192 | 2 | 1 | 310 | 28 | 339 | 1.32e-65 | 209 |
Msa1186260 | MtrunA17_Chr6g0479421 | 37.179 | 312 | 194 | 2 | 1 | 310 | 1 | 312 | 7.98e-63 | 201 |
Msa1186260 | MtrunA17_Chr1g0210981 | 34.936 | 312 | 201 | 2 | 1 | 310 | 1 | 312 | 3.68e-59 | 192 |
Msa1186260 | MtrunA17_Chr6g0479391 | 35.235 | 298 | 192 | 1 | 14 | 310 | 15 | 312 | 1.80e-56 | 185 |
Msa1186260 | MtrunA17_Chr8g0352581 | 35.647 | 317 | 178 | 8 | 13 | 311 | 4 | 312 | 2.80e-49 | 166 |
Msa1186260 | MtrunA17_Chr3g0084011 | 67.123 | 73 | 24 | 0 | 1 | 73 | 1 | 73 | 7.02e-30 | 109 |
Msa1186260 | MtrunA17_Chr6g0461141 | 26.984 | 315 | 213 | 7 | 8 | 311 | 2 | 310 | 1.88e-27 | 108 |
Msa1186260 | MtrunA17_Chr3g0084021 | 66.176 | 68 | 23 | 0 | 143 | 210 | 5 | 72 | 5.73e-24 | 93.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1186260 | AT5G12380.1 | 54.019 | 311 | 142 | 1 | 1 | 310 | 1 | 311 | 8.50e-122 | 352 |
Msa1186260 | AT1G35720.1 | 51.420 | 317 | 149 | 4 | 1 | 313 | 1 | 316 | 1.24e-106 | 313 |
Msa1186260 | AT5G10230.1 | 51.603 | 312 | 149 | 2 | 1 | 310 | 1 | 312 | 5.34e-105 | 310 |
Msa1186260 | AT5G10220.1 | 51.274 | 314 | 149 | 3 | 1 | 310 | 1 | 314 | 4.25e-102 | 302 |
Msa1186260 | AT5G65020.1 | 51.438 | 313 | 149 | 3 | 1 | 310 | 1 | 313 | 7.41e-102 | 301 |
Msa1186260 | AT5G65020.2 | 51.042 | 288 | 139 | 2 | 25 | 310 | 11 | 298 | 7.80e-93 | 278 |
Msa1186260 | AT2G38760.1 | 41.509 | 318 | 178 | 3 | 1 | 310 | 1 | 318 | 1.40e-79 | 245 |
Msa1186260 | AT1G68090.1 | 35.783 | 313 | 198 | 3 | 1 | 310 | 1 | 313 | 7.06e-60 | 194 |
Msa1186260 | AT2G38750.2 | 33.117 | 308 | 180 | 7 | 25 | 313 | 2 | 302 | 3.69e-42 | 148 |
Msa1186260 | AT2G38750.1 | 33.117 | 308 | 180 | 7 | 25 | 313 | 19 | 319 | 4.13e-42 | 148 |
Msa1186260 | AT1G68090.2 | 34.000 | 250 | 162 | 3 | 1 | 247 | 1 | 250 | 1.49e-41 | 145 |
Find 99 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTCTGAATTAAATTCTTTA+TGG | 0.147771 | 8_1:-24384859 | Msa1186260:three_prime_UTR |
GCTTCAGTTTGTGCCAATTT+TGG | 0.171052 | 8_1:+24386067 | None:intergenic |
CTCACATTCAAGAGCTCTTC+AGG | 0.224828 | 8_1:+24386462 | None:intergenic |
TATTTGTTAGATTAAGATTA+AGG | 0.254376 | 8_1:-24384939 | Msa1186260:three_prime_UTR |
AAACATCTGAGATGACTTTC+AGG | 0.262103 | 8_1:+24385322 | None:intergenic |
AATTTAATTCAGAATGTCTT+AGG | 0.274980 | 8_1:+24384867 | None:intergenic |
TTAATCTTTACAGAAGCTTT+TGG | 0.285693 | 8_1:-24385758 | Msa1186260:intron |
GACTTAAAGTTGTGATGTTT+TGG | 0.291418 | 8_1:-24385152 | Msa1186260:three_prime_UTR |
TAGGGCTAGTGACTGCATTT+AGG | 0.307120 | 8_1:-24386111 | Msa1186260:CDS |
TGATGAGATCAATCCAAAAT+TGG | 0.309418 | 8_1:-24386080 | Msa1186260:CDS |
CGTCAAATTTCAGAAGTATA+TGG | 0.319961 | 8_1:-24384905 | Msa1186260:three_prime_UTR |
GGTATGTTTGATGGTTCATT+TGG | 0.334148 | 8_1:-24385056 | Msa1186260:three_prime_UTR |
TGCGGAGCGTGATGCTGTTT+TGG | 0.342220 | 8_1:-24386550 | Msa1186260:CDS |
GCACTCCTTGGAGGAAGATT+TGG | 0.342661 | 8_1:-24386415 | Msa1186260:CDS |
GGCGAAGATGGCTGGAGGTA+TGG | 0.343612 | 8_1:+24386388 | None:intergenic |
GACATCCGATAAAATCAAAA+TGG | 0.356401 | 8_1:+24387458 | None:intergenic |
CCTTGTAGTCAAGATCCTTA+TGG | 0.357139 | 8_1:+24385994 | None:intergenic |
CAGCATCTTCATTGGGAGAA+TGG | 0.357218 | 8_1:+24387149 | None:intergenic |
AATGGTTGCTGGGAGCAATA+AGG | 0.357762 | 8_1:+24387167 | None:intergenic |
AGAAAATACATATTCAACTA+TGG | 0.360880 | 8_1:-24387194 | Msa1186260:exon |
AAGTTCCTTCTCACTCTCTT+GGG | 0.370043 | 8_1:-24385234 | Msa1186260:CDS |
GATGAAGAAATCTAAGTCTA+TGG | 0.387403 | 8_1:+24387242 | None:intergenic |
GAAGTTCCTTCTCACTCTCT+TGG | 0.389750 | 8_1:-24385235 | Msa1186260:CDS |
TGGTTGTATGGTATGTTTGA+TGG | 0.401963 | 8_1:-24385065 | Msa1186260:three_prime_UTR |
ATAGAGAAATAAATGTATCT+TGG | 0.408696 | 8_1:+24387482 | None:intergenic |
CATATACTTCTGAAATTTGA+CGG | 0.410726 | 8_1:+24384906 | None:intergenic |
TAGAGCTTCAGCATCTTCAT+TGG | 0.413067 | 8_1:+24387141 | None:intergenic |
ACTTGCCTGGCGAAGATGGC+TGG | 0.416208 | 8_1:+24386380 | None:intergenic |
GCGAAGATGGCTGGAGGTAT+GGG | 0.419308 | 8_1:+24386389 | None:intergenic |
AGATCCTTATGGCTTCTTCA+TGG | 0.424810 | 8_1:+24386005 | None:intergenic |
TAGAGAAATAAATGTATCTT+GGG | 0.430932 | 8_1:+24387483 | None:intergenic |
TTCATTGGGAGAATGGTTGC+TGG | 0.439937 | 8_1:+24387156 | None:intergenic |
AGAGCTTCAGCATCTTCATT+GGG | 0.446820 | 8_1:+24387142 | None:intergenic |
GGTTGAAAGTTGCAATCAGC+TGG | 0.450175 | 8_1:+24385963 | None:intergenic |
GCTGTGGCAAAGGAAACTTC+AGG | 0.453417 | 8_1:-24385267 | Msa1186260:CDS |
AAGGACTTGCCTGGCGAAGA+TGG | 0.455062 | 8_1:+24386376 | None:intergenic |
ATGGTTGCTGGGAGCAATAA+GGG | 0.478955 | 8_1:+24387168 | None:intergenic |
TTGGTTTATCTTGTTGAATG+TGG | 0.489020 | 8_1:-24385133 | Msa1186260:three_prime_UTR |
CACAAGCTCCATCAAGAGAA+GGG | 0.499940 | 8_1:+24385192 | None:intergenic |
TGAGGATCTTATCAAACGAT+TGG | 0.500715 | 8_1:-24386770 | Msa1186260:CDS |
TACCTCCAGCCATCTTCGCC+AGG | 0.501875 | 8_1:-24386385 | Msa1186260:intron |
AACAGAAAGCCGTGTACCGT+TGG | 0.504787 | 8_1:-24386584 | Msa1186260:intron |
AAATTGGCACAAACTGAAGC+TGG | 0.505178 | 8_1:-24386064 | Msa1186260:CDS |
TCACATTCAAGAGCTCTTCA+GGG | 0.508130 | 8_1:+24386463 | None:intergenic |
CAAACGCTACAAGCACTCCT+TGG | 0.517630 | 8_1:-24386427 | Msa1186260:CDS |
CCATAAGGATCTTGACTACA+AGG | 0.517780 | 8_1:-24385994 | Msa1186260:CDS |
TTATGAAGGCATTTATAATG+AGG | 0.522283 | 8_1:-24386788 | Msa1186260:CDS |
TGAGATCAAAGGAGACTTCG+AGG | 0.522824 | 8_1:-24386743 | Msa1186260:intron |
TCTTGAGCATGCTGTGGCAA+AGG | 0.526005 | 8_1:-24385277 | Msa1186260:CDS |
CGAGATGCAATCAAGAAGGT+TGG | 0.532695 | 8_1:-24385396 | Msa1186260:CDS |
GTGACTGCATTTAGGTATGT+TGG | 0.533407 | 8_1:-24386103 | Msa1186260:CDS |
TTTATCATATACCTTAGTGA+TGG | 0.537206 | 8_1:+24385916 | None:intergenic |
GAAGCCATGAAGAAGCCATA+AGG | 0.541126 | 8_1:-24386009 | Msa1186260:CDS |
CAAATCAGAAAAGCTTATGA+AGG | 0.541965 | 8_1:-24386802 | Msa1186260:CDS |
CTGTGGCAAAGGAAACTTCA+GGG | 0.542389 | 8_1:-24385266 | Msa1186260:CDS |
AAATAACATCTCTACATACA+TGG | 0.545836 | 8_1:+24384957 | None:intergenic |
CATTAATTAAATGATGTATG+TGG | 0.546333 | 8_1:-24387374 | Msa1186260:five_prime_UTR |
TCATGTTAAGTACTATGAAA+AGG | 0.546698 | 8_1:-24385677 | Msa1186260:intron |
AAAACAGCATCACGCTCCGC+AGG | 0.547985 | 8_1:+24386552 | None:intergenic |
ATCATATACCTTAGTGATGG+AGG | 0.549366 | 8_1:+24385919 | None:intergenic |
ACGCTACAAGCACTCCTTGG+AGG | 0.551063 | 8_1:-24386424 | Msa1186260:CDS |
GAGTCAGTGAAAGAGAAGAA+AGG | 0.551826 | 8_1:-24386031 | Msa1186260:CDS |
AAAACTGTGATAACAATACT+TGG | 0.555304 | 8_1:-24386850 | Msa1186260:CDS |
TAACATGATCATTGAAGCAT+CGG | 0.562381 | 8_1:+24385692 | None:intergenic |
TCATTGGGAGAATGGTTGCT+GGG | 0.565172 | 8_1:+24387157 | None:intergenic |
AGATGCTGAAGCTCTAAGAA+AGG | 0.567867 | 8_1:-24387134 | Msa1186260:CDS |
ACGGGTGAGCGCATCCTCAT+CGG | 0.568327 | 8_1:+24385371 | None:intergenic |
TATTTATAATAGTTACCGGA+TGG | 0.570325 | 8_1:-24387302 | Msa1186260:five_prime_UTR |
TTGCCACAGCATGCTCAAGA+AGG | 0.574229 | 8_1:+24385280 | None:intergenic |
GAGCTCTGCTCACAACCACA+CGG | 0.574900 | 8_1:+24385352 | None:intergenic |
TTCAAGCATCCAACGGTACA+CGG | 0.583068 | 8_1:+24386575 | None:intergenic |
TCATGGTACCTCCATCACTA+AGG | 0.583313 | 8_1:-24385927 | Msa1186260:intron |
TGTTTATAAAAGTGATCGGA+GGG | 0.584467 | 8_1:+24387417 | None:intergenic |
AGTTCCTTCTCACTCTCTTG+GGG | 0.584889 | 8_1:-24385233 | Msa1186260:CDS |
GCACAAGCTCCATCAAGAGA+AGG | 0.587412 | 8_1:+24385191 | None:intergenic |
GCAAATGTTGCTATCAAGAG+TGG | 0.587800 | 8_1:-24386528 | Msa1186260:CDS |
CGATTGGAATCTGAGATCAA+AGG | 0.597023 | 8_1:-24386754 | Msa1186260:CDS |
ATCATTGAAGCATCGGATGG+TGG | 0.601308 | 8_1:+24385699 | None:intergenic |
AAGATGGCTGGAGGTATGGG+CGG | 0.601311 | 8_1:+24386392 | None:intergenic |
TTGTTTATAAAAGTGATCGG+AGG | 0.603656 | 8_1:+24387416 | None:intergenic |
GGCGGCCAAATCTTCCTCCA+AGG | 0.611461 | 8_1:+24386410 | None:intergenic |
AGCTCTGCTCACAACCACAC+GGG | 0.620972 | 8_1:+24385353 | None:intergenic |
GCTCTAAGAAAGGCTTTCGA+AGG | 0.621766 | 8_1:-24387124 | Msa1186260:intron |
CCGTTGGATGCTTGAACCTG+CGG | 0.622222 | 8_1:-24386568 | Msa1186260:CDS |
GTTGAAAGTTGCAATCAGCT+GGG | 0.623575 | 8_1:+24385964 | None:intergenic |
ACAAGCTCCATCAAGAGAAG+GGG | 0.634760 | 8_1:+24385193 | None:intergenic |
GTGCTTGTAGCGTTTGACGT+AGG | 0.638713 | 8_1:+24386434 | None:intergenic |
ATGATCATTGAAGCATCGGA+TGG | 0.640360 | 8_1:+24385696 | None:intergenic |
CACATTCAAGAGCTCTTCAG+GGG | 0.642650 | 8_1:+24386464 | None:intergenic |
GGTGCGAGATGCAATCAAGA+AGG | 0.643809 | 8_1:-24385400 | Msa1186260:CDS |
CTTTCCCCAAGAGAGTGAGA+AGG | 0.653124 | 8_1:+24385229 | None:intergenic |
CAAGAAGGTTGGAACCGATG+AGG | 0.660964 | 8_1:-24385385 | Msa1186260:CDS |
TACCATGAGTCTCTCTATAG+CGG | 0.662344 | 8_1:+24385942 | None:intergenic |
TGTCCTTCTTGAGCATGCTG+TGG | 0.666036 | 8_1:-24385283 | Msa1186260:CDS |
CCGCAGGTTCAAGCATCCAA+CGG | 0.676153 | 8_1:+24386568 | None:intergenic |
AACCGCTATAGAGAGACTCA+TGG | 0.679537 | 8_1:-24385944 | Msa1186260:CDS |
TGCCTGGCGAAGATGGCTGG+AGG | 0.681169 | 8_1:+24386383 | None:intergenic |
TGTGGCAAAGGAAACTTCAG+GGG | 0.706591 | 8_1:-24385265 | Msa1186260:CDS |
TGAGGATGCGCTCACCCGTG+TGG | 0.717868 | 8_1:-24385367 | Msa1186260:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTATTTATAATAGTTAC+CGG | - | chr8_1:24385014-24385033 | Msa1186260:three_prime_UTR | 10.0% |
!!! | TTTTTGTTTATAAAAGTGAT+CGG | + | chr8_1:24384910-24384929 | None:intergenic | 15.0% |
!! | TTATGTTGTATTAAAATTGA+TGG | - | chr8_1:24385413-24385432 | Msa1186260:intron | 15.0% |
!! | CAATTACATGTATAAAAATT+AGG | - | chr8_1:24386112-24386131 | Msa1186260:CDS | 15.0% |
!!! | TATTTGTTAGATTAAGATTA+AGG | - | chr8_1:24387381-24387400 | Msa1186260:five_prime_UTR | 15.0% |
!! | ATTCTGAATTAAATTCTTTA+TGG | - | chr8_1:24387461-24387480 | Msa1186260:five_prime_UTR | 15.0% |
!! | ATAGAGAAATAAATGTATCT+TGG | + | chr8_1:24384841-24384860 | None:intergenic | 20.0% |
!!! | CTATACCATTTTGATTTTAT+CGG | - | chr8_1:24384857-24384876 | Msa1186260:three_prime_UTR | 20.0% |
!! | CATTAATTAAATGATGTATG+TGG | - | chr8_1:24384946-24384965 | Msa1186260:three_prime_UTR | 20.0% |
!! | AGAAAATACATATTCAACTA+TGG | - | chr8_1:24385126-24385145 | Msa1186260:three_prime_UTR | 20.0% |
!! | AGATTAGACTGAAATTAAAA+TGG | + | chr8_1:24385319-24385338 | None:intergenic | 20.0% |
!! | TTTATCAATGTTAATCATCA+TGG | + | chr8_1:24385621-24385640 | None:intergenic | 20.0% |
!!! | ACTAGTACTATTTTATTACA+TGG | - | chr8_1:24387235-24387254 | Msa1186260:five_prime_UTR | 20.0% |
!!! | TATTTTATTACATGGTTGTA+TGG | - | chr8_1:24387243-24387262 | Msa1186260:five_prime_UTR | 20.0% |
!! | AATTTAATTCAGAATGTCTT+AGG | + | chr8_1:24387456-24387475 | None:intergenic | 20.0% |
! | TATTTATAATAGTTACCGGA+TGG | - | chr8_1:24385018-24385037 | Msa1186260:three_prime_UTR | 25.0% |
! | GTCTATAAACAAGAAAAAAG+GGG | + | chr8_1:24385231-24385250 | None:intergenic | 25.0% |
! | GGTCTATAAACAAGAAAAAA+GGG | + | chr8_1:24385232-24385251 | None:intergenic | 25.0% |
! | TGGTCTATAAACAAGAAAAA+AGG | + | chr8_1:24385233-24385252 | None:intergenic | 25.0% |
! | AGATATAATCTATAGGACTA+TGG | + | chr8_1:24385258-24385277 | None:intergenic | 25.0% |
! | TGATGACAGATATAATCTAT+AGG | + | chr8_1:24385265-24385284 | None:intergenic | 25.0% |
!!! | ATGATTCATTTTTGTAGGAT+GGG | - | chr8_1:24385436-24385455 | Msa1186260:intron | 25.0% |
! | AAAACTGTGATAACAATACT+TGG | - | chr8_1:24385470-24385489 | Msa1186260:intron | 25.0% |
!!! | TTATGAAGGCATTTATAATG+AGG | - | chr8_1:24385532-24385551 | Msa1186260:intron | 25.0% |
! | AAATTGTTTGTGTGTTTCTT+TGG | - | chr8_1:24385645-24385664 | Msa1186260:intron | 25.0% |
! | AAAAGCAATATTAGACCATA+TGG | - | chr8_1:24385988-24386007 | Msa1186260:CDS | 25.0% |
!!! | AGATCATGGTTTTAAAATTG+CGG | - | chr8_1:24386075-24386094 | Msa1186260:CDS | 25.0% |
! | TTTATCATATACCTTAGTGA+TGG | + | chr8_1:24386407-24386426 | None:intergenic | 25.0% |
!!! | TTATTGTTTTGAGTTGACAA+GGG | + | chr8_1:24386486-24386505 | None:intergenic | 25.0% |
!!! | TTTATTGTTTTGAGTTGACA+AGG | + | chr8_1:24386487-24386506 | None:intergenic | 25.0% |
! | AAGCTTCTGTAAAGATTAAA+GGG | + | chr8_1:24386561-24386580 | None:intergenic | 25.0% |
! | AAAGCTTCTGTAAAGATTAA+AGG | + | chr8_1:24386562-24386581 | None:intergenic | 25.0% |
!! | TTAATCTTTACAGAAGCTTT+TGG | - | chr8_1:24386562-24386581 | Msa1186260:CDS | 25.0% |
! | TCATGTTAAGTACTATGAAA+AGG | - | chr8_1:24386643-24386662 | Msa1186260:intron | 25.0% |
! | GTTGTACATTGAAAACAAAT+CGG | - | chr8_1:24386723-24386742 | Msa1186260:intron | 25.0% |
!! | CTAGCAAAACATTTTATGAA+TGG | + | chr8_1:24386751-24386770 | None:intergenic | 25.0% |
! | AAATAACATCTCTACATACA+TGG | + | chr8_1:24387366-24387385 | None:intergenic | 25.0% |
!!! | CATATACTTCTGAAATTTGA+CGG | + | chr8_1:24387417-24387436 | None:intergenic | 25.0% |
GACATCCGATAAAATCAAAA+TGG | + | chr8_1:24384865-24384884 | None:intergenic | 30.0% | |
!! | TTTTATCGGATGTCACTTAA+AGG | - | chr8_1:24384871-24384890 | Msa1186260:three_prime_UTR | 30.0% |
TGTTTATAAAAGTGATCGGA+GGG | + | chr8_1:24384906-24384925 | None:intergenic | 30.0% | |
TTGTTTATAAAAGTGATCGG+AGG | + | chr8_1:24384907-24384926 | None:intergenic | 30.0% | |
ACAAAAATGAATACACCATC+CGG | + | chr8_1:24385036-24385055 | None:intergenic | 30.0% | |
GATGAAGAAATCTAAGTCTA+TGG | + | chr8_1:24385081-24385100 | None:intergenic | 30.0% | |
!! | GATGGATGATTCATTTTTGT+AGG | - | chr8_1:24385431-24385450 | Msa1186260:intron | 30.0% |
!! | GATGATTCATTTTTGTAGGA+TGG | - | chr8_1:24385435-24385454 | Msa1186260:intron | 30.0% |
!! | TGATTCATTTTTGTAGGATG+GGG | - | chr8_1:24385437-24385456 | Msa1186260:intron | 30.0% |
CAAATCAGAAAAGCTTATGA+AGG | - | chr8_1:24385518-24385537 | Msa1186260:intron | 30.0% | |
CAAAAACTACAATGTCATTG+TGG | - | chr8_1:24385815-24385834 | Msa1186260:intron | 30.0% | |
!! | TTAGAAGAGTTGATGGAAAA+AGG | + | chr8_1:24385966-24385985 | None:intergenic | 30.0% |
! | CTTTTTGTTAGAAGAGTTGA+TGG | + | chr8_1:24385973-24385992 | None:intergenic | 30.0% |
!!! | ATCGCGATTTTAAAACCATA+TGG | + | chr8_1:24386006-24386025 | None:intergenic | 30.0% |
GTATGAGAAACATTAGATCA+TGG | - | chr8_1:24386061-24386080 | Msa1186260:CDS | 30.0% | |
TGTGATATTTCTTGAAACCA+TGG | - | chr8_1:24386147-24386166 | Msa1186260:intron | 30.0% | |
!!! | ACCATGGTTTATTGATTTTG+TGG | - | chr8_1:24386163-24386182 | Msa1186260:intron | 30.0% |
ACCACAAAATCAATAAACCA+TGG | + | chr8_1:24386167-24386186 | None:intergenic | 30.0% | |
TGATGAGATCAATCCAAAAT+TGG | - | chr8_1:24386240-24386259 | Msa1186260:intron | 30.0% | |
TAACATGATCATTGAAGCAT+CGG | + | chr8_1:24386631-24386650 | None:intergenic | 30.0% | |
!! | ATAGTTCTGATTTGTTGACA+TGG | + | chr8_1:24386818-24386837 | None:intergenic | 30.0% |
! | ACATTTTCTGATCATATCGT+AGG | - | chr8_1:24386896-24386915 | Msa1186260:intron | 30.0% |
! | GACTTAAAGTTGTGATGTTT+TGG | - | chr8_1:24387168-24387187 | Msa1186260:CDS | 30.0% |
TTGGTTTATCTTGTTGAATG+TGG | - | chr8_1:24387187-24387206 | Msa1186260:exon | 30.0% | |
! | CGTCAAATTTCAGAAGTATA+TGG | - | chr8_1:24387415-24387434 | Msa1186260:five_prime_UTR | 30.0% |
TAATCTATAGGACTATGGCA+TGG | + | chr8_1:24385253-24385272 | None:intergenic | 35.0% | |
TGAGGATCTTATCAAACGAT+TGG | - | chr8_1:24385550-24385569 | Msa1186260:intron | 35.0% | |
!!! | TTTTTCGAGCAGCTTTTAGT+AGG | - | chr8_1:24386190-24386209 | Msa1186260:intron | 35.0% |
!! | TTTTCGAGCAGCTTTTAGTA+GGG | - | chr8_1:24386191-24386210 | Msa1186260:intron | 35.0% |
ATCATATACCTTAGTGATGG+AGG | + | chr8_1:24386404-24386423 | None:intergenic | 35.0% | |
! | TTACAGAAGCTTTTGGATGA+AGG | - | chr8_1:24386569-24386588 | Msa1186260:CDS | 35.0% |
! | AGGATCTGATGATTTTCAGA+AGG | - | chr8_1:24386589-24386608 | Msa1186260:intron | 35.0% |
! | TTTTCTGATCATATCGTAGG+TGG | - | chr8_1:24386899-24386918 | Msa1186260:intron | 35.0% |
! | AAACATCTGAGATGACTTTC+AGG | + | chr8_1:24387001-24387020 | None:intergenic | 35.0% |
TGGTTGTATGGTATGTTTGA+TGG | - | chr8_1:24387255-24387274 | Msa1186260:five_prime_UTR | 35.0% | |
! | GGTATGTTTGATGGTTCATT+TGG | - | chr8_1:24387264-24387283 | Msa1186260:five_prime_UTR | 35.0% |
AGAGCTTCAGCATCTTCATT+GGG | + | chr8_1:24385181-24385200 | None:intergenic | 40.0% | |
TAGAGCTTCAGCATCTTCAT+TGG | + | chr8_1:24385182-24385201 | None:intergenic | 40.0% | |
!! | AGATGCTGAAGCTCTAAGAA+AGG | - | chr8_1:24385186-24385205 | Msa1186260:three_prime_UTR | 40.0% |
! | CGATTGGAATCTGAGATCAA+AGG | - | chr8_1:24385566-24385585 | Msa1186260:intron | 40.0% |
GCAAATGTTGCTATCAAGAG+TGG | - | chr8_1:24385792-24385811 | Msa1186260:intron | 40.0% | |
TCACATTCAAGAGCTCTTCA+GGG | + | chr8_1:24385860-24385879 | None:intergenic | 40.0% | |
GTGACTGCATTTAGGTATGT+TGG | - | chr8_1:24386217-24386236 | Msa1186260:intron | 40.0% | |
! | GCTTCAGTTTGTGCCAATTT+TGG | + | chr8_1:24386256-24386275 | None:intergenic | 40.0% |
AAATTGGCACAAACTGAAGC+TGG | - | chr8_1:24386256-24386275 | Msa1186260:intron | 40.0% | |
GAGTCAGTGAAAGAGAAGAA+AGG | - | chr8_1:24386289-24386308 | Msa1186260:intron | 40.0% | |
AGATCCTTATGGCTTCTTCA+TGG | + | chr8_1:24386318-24386337 | None:intergenic | 40.0% | |
CCTTGTAGTCAAGATCCTTA+TGG | + | chr8_1:24386329-24386348 | None:intergenic | 40.0% | |
CCATAAGGATCTTGACTACA+AGG | - | chr8_1:24386326-24386345 | Msa1186260:intron | 40.0% | |
GTTGAAAGTTGCAATCAGCT+GGG | + | chr8_1:24386359-24386378 | None:intergenic | 40.0% | |
TACCATGAGTCTCTCTATAG+CGG | + | chr8_1:24386381-24386400 | None:intergenic | 40.0% | |
!! | ATGATCATTGAAGCATCGGA+TGG | + | chr8_1:24386627-24386646 | None:intergenic | 40.0% |
AAGTTCCTTCTCACTCTCTT+GGG | - | chr8_1:24387086-24387105 | Msa1186260:intron | 40.0% | |
! | GAATTTTCCCCTTCTCTTGA+TGG | - | chr8_1:24387120-24387139 | Msa1186260:intron | 40.0% |
ATGGTTGCTGGGAGCAATAA+GGG | + | chr8_1:24385155-24385174 | None:intergenic | 45.0% | |
AATGGTTGCTGGGAGCAATA+AGG | + | chr8_1:24385156-24385175 | None:intergenic | 45.0% | |
TCATTGGGAGAATGGTTGCT+GGG | + | chr8_1:24385166-24385185 | None:intergenic | 45.0% | |
TTCATTGGGAGAATGGTTGC+TGG | + | chr8_1:24385167-24385186 | None:intergenic | 45.0% | |
CAGCATCTTCATTGGGAGAA+TGG | + | chr8_1:24385174-24385193 | None:intergenic | 45.0% | |
!! | GCTCTAAGAAAGGCTTTCGA+AGG | - | chr8_1:24385196-24385215 | Msa1186260:three_prime_UTR | 45.0% |
TGAGATCAAAGGAGACTTCG+AGG | - | chr8_1:24385577-24385596 | Msa1186260:intron | 45.0% | |
TTCAAGCATCCAACGGTACA+CGG | + | chr8_1:24385748-24385767 | None:intergenic | 45.0% | |
CACATTCAAGAGCTCTTCAG+GGG | + | chr8_1:24385859-24385878 | None:intergenic | 45.0% | |
CTCACATTCAAGAGCTCTTC+AGG | + | chr8_1:24385861-24385880 | None:intergenic | 45.0% | |
TGATGGAAAAAGGACTTGCC+TGG | + | chr8_1:24385956-24385975 | None:intergenic | 45.0% | |
! | TAGGGCTAGTGACTGCATTT+AGG | - | chr8_1:24386209-24386228 | Msa1186260:intron | 45.0% |
GAAGCCATGAAGAAGCCATA+AGG | - | chr8_1:24386311-24386330 | Msa1186260:intron | 45.0% | |
GGTTGAAAGTTGCAATCAGC+TGG | + | chr8_1:24386360-24386379 | None:intergenic | 45.0% | |
AACCGCTATAGAGAGACTCA+TGG | - | chr8_1:24386376-24386395 | Msa1186260:intron | 45.0% | |
TCATGGTACCTCCATCACTA+AGG | - | chr8_1:24386393-24386412 | Msa1186260:CDS | 45.0% | |
GAGTTACCACCTATGAAGCA+CGG | - | chr8_1:24386429-24386448 | Msa1186260:CDS | 45.0% | |
!! | ATCATTGAAGCATCGGATGG+TGG | + | chr8_1:24386624-24386643 | None:intergenic | 45.0% |
CGAGATGCAATCAAGAAGGT+TGG | - | chr8_1:24386924-24386943 | Msa1186260:intron | 45.0% | |
CTGTGGCAAAGGAAACTTCA+GGG | - | chr8_1:24387054-24387073 | Msa1186260:intron | 45.0% | |
TGTGGCAAAGGAAACTTCAG+GGG | - | chr8_1:24387055-24387074 | Msa1186260:intron | 45.0% | |
GAAGTTCCTTCTCACTCTCT+TGG | - | chr8_1:24387085-24387104 | Msa1186260:intron | 45.0% | |
AGTTCCTTCTCACTCTCTTG+GGG | - | chr8_1:24387087-24387106 | Msa1186260:intron | 45.0% | |
ACAAGCTCCATCAAGAGAAG+GGG | + | chr8_1:24387130-24387149 | None:intergenic | 45.0% | |
CACAAGCTCCATCAAGAGAA+GGG | + | chr8_1:24387131-24387150 | None:intergenic | 45.0% | |
!! | AAAATTATGATATTATAATT+TGG | - | chr8_1:24386520-24386539 | Msa1186260:CDS | 5.0% |
AACAGAAAGCCGTGTACCGT+TGG | - | chr8_1:24385736-24385755 | Msa1186260:CDS | 50.0% | |
GTGCTTGTAGCGTTTGACGT+AGG | + | chr8_1:24385889-24385908 | None:intergenic | 50.0% | |
CAAACGCTACAAGCACTCCT+TGG | - | chr8_1:24385893-24385912 | Msa1186260:intron | 50.0% | |
GCACTCCTTGGAGGAAGATT+TGG | - | chr8_1:24385905-24385924 | Msa1186260:intron | 50.0% | |
TACCGCTCATGCTTCGTTTG+CGG | - | chr8_1:24386030-24386049 | Msa1186260:CDS | 50.0% | |
AACCGCAAACGAAGCATGAG+CGG | + | chr8_1:24386035-24386054 | None:intergenic | 50.0% | |
!! | TAGAGGTGTCCGTGCTTCAT+AGG | + | chr8_1:24386441-24386460 | None:intergenic | 50.0% |
CGCGACACGCTTAATACTAG+AGG | + | chr8_1:24386458-24386477 | None:intergenic | 50.0% | |
GGTGCGAGATGCAATCAAGA+AGG | - | chr8_1:24386920-24386939 | Msa1186260:intron | 50.0% | |
CAAGAAGGTTGGAACCGATG+AGG | - | chr8_1:24386935-24386954 | Msa1186260:intron | 50.0% | |
TGTCCTTCTTGAGCATGCTG+TGG | - | chr8_1:24387037-24387056 | Msa1186260:intron | 50.0% | |
TTGCCACAGCATGCTCAAGA+AGG | + | chr8_1:24387043-24387062 | None:intergenic | 50.0% | |
TCTTGAGCATGCTGTGGCAA+AGG | - | chr8_1:24387043-24387062 | Msa1186260:intron | 50.0% | |
GCTGTGGCAAAGGAAACTTC+AGG | - | chr8_1:24387053-24387072 | Msa1186260:intron | 50.0% | |
CTTTCCCCAAGAGAGTGAGA+AGG | + | chr8_1:24387094-24387113 | None:intergenic | 50.0% | |
GCACAAGCTCCATCAAGAGA+AGG | + | chr8_1:24387132-24387151 | None:intergenic | 50.0% | |
CCGCAGGTTCAAGCATCCAA+CGG | + | chr8_1:24385755-24385774 | None:intergenic | 55.0% | |
CCGTTGGATGCTTGAACCTG+CGG | - | chr8_1:24385752-24385771 | Msa1186260:intron | 55.0% | |
AAAACAGCATCACGCTCCGC+AGG | + | chr8_1:24385771-24385790 | None:intergenic | 55.0% | |
!! | TGCGGAGCGTGATGCTGTTT+TGG | - | chr8_1:24385770-24385789 | Msa1186260:intron | 55.0% |
ACGCTACAAGCACTCCTTGG+AGG | - | chr8_1:24385896-24385915 | Msa1186260:intron | 55.0% | |
! | AAGATGGCTGGAGGTATGGG+CGG | + | chr8_1:24385931-24385950 | None:intergenic | 55.0% |
! | GCGAAGATGGCTGGAGGTAT+GGG | + | chr8_1:24385934-24385953 | None:intergenic | 55.0% |
AAGGACTTGCCTGGCGAAGA+TGG | + | chr8_1:24385947-24385966 | None:intergenic | 55.0% | |
AGGTGTCCGTGCTTCATAGG+TGG | + | chr8_1:24386438-24386457 | None:intergenic | 55.0% | |
AGCTCTGCTCACAACCACAC+GGG | + | chr8_1:24386970-24386989 | None:intergenic | 55.0% | |
GAGCTCTGCTCACAACCACA+CGG | + | chr8_1:24386971-24386990 | None:intergenic | 55.0% | |
GGCGGCCAAATCTTCCTCCA+AGG | + | chr8_1:24385913-24385932 | None:intergenic | 60.0% | |
GGCGAAGATGGCTGGAGGTA+TGG | + | chr8_1:24385935-24385954 | None:intergenic | 60.0% | |
TACCTCCAGCCATCTTCGCC+AGG | - | chr8_1:24385935-24385954 | Msa1186260:CDS | 60.0% | |
ACTTGCCTGGCGAAGATGGC+TGG | + | chr8_1:24385943-24385962 | None:intergenic | 60.0% | |
ACGGGTGAGCGCATCCTCAT+CGG | + | chr8_1:24386952-24386971 | None:intergenic | 60.0% | |
TGCCTGGCGAAGATGGCTGG+AGG | + | chr8_1:24385940-24385959 | None:intergenic | 65.0% | |
TGAGGATGCGCTCACCCGTG+TGG | - | chr8_1:24386953-24386972 | Msa1186260:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 24384838 | 24387504 | 24384838 | ID=Msa1186260;Name=Msa1186260 |
chr8_1 | mRNA | 24384838 | 24387504 | 24384838 | ID=Msa1186260-mRNA-1;Parent=Msa1186260;Name=Msa1186260-mRNA-1;_AED=0.31;_eAED=0.31;_QI=307|1|1|1|1|1|6|383|313 |
chr8_1 | exon | 24384838 | 24385424 | 24384838 | ID=Msa1186260-mRNA-1:exon:8886;Parent=Msa1186260-mRNA-1 |
chr8_1 | exon | 24385678 | 24385767 | 24385678 | ID=Msa1186260-mRNA-1:exon:8885;Parent=Msa1186260-mRNA-1 |
chr8_1 | exon | 24385928 | 24386140 | 24385928 | ID=Msa1186260-mRNA-1:exon:8884;Parent=Msa1186260-mRNA-1 |
chr8_1 | exon | 24386386 | 24386601 | 24386386 | ID=Msa1186260-mRNA-1:exon:8883;Parent=Msa1186260-mRNA-1 |
chr8_1 | exon | 24386744 | 24386889 | 24386744 | ID=Msa1186260-mRNA-1:exon:8882;Parent=Msa1186260-mRNA-1 |
chr8_1 | exon | 24387125 | 24387504 | 24387125 | ID=Msa1186260-mRNA-1:exon:8881;Parent=Msa1186260-mRNA-1 |
chr8_1 | five_prime_UTR | 24387198 | 24387504 | 24387198 | ID=Msa1186260-mRNA-1:five_prime_utr;Parent=Msa1186260-mRNA-1 |
chr8_1 | CDS | 24387125 | 24387197 | 24387125 | ID=Msa1186260-mRNA-1:cds;Parent=Msa1186260-mRNA-1 |
chr8_1 | CDS | 24386744 | 24386889 | 24386744 | ID=Msa1186260-mRNA-1:cds;Parent=Msa1186260-mRNA-1 |
chr8_1 | CDS | 24386386 | 24386601 | 24386386 | ID=Msa1186260-mRNA-1:cds;Parent=Msa1186260-mRNA-1 |
chr8_1 | CDS | 24385928 | 24386140 | 24385928 | ID=Msa1186260-mRNA-1:cds;Parent=Msa1186260-mRNA-1 |
chr8_1 | CDS | 24385678 | 24385767 | 24385678 | ID=Msa1186260-mRNA-1:cds;Parent=Msa1186260-mRNA-1 |
chr8_1 | CDS | 24385221 | 24385424 | 24385221 | ID=Msa1186260-mRNA-1:cds;Parent=Msa1186260-mRNA-1 |
chr8_1 | three_prime_UTR | 24384838 | 24385220 | 24384838 | ID=Msa1186260-mRNA-1:three_prime_utr;Parent=Msa1186260-mRNA-1 |
Gene Sequence |
Protein sequence |