AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1099910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1099910 MtrunA17_Chr7g0217941 97.785 316 7 0 1 316 1 316 0.0 652
Msa1099910 MtrunA17_Chr6g0453551 81.646 316 58 0 1 316 1 316 0.0 557
Msa1099910 MtrunA17_Chr6g0487101 47.931 290 137 5 14 296 93 375 1.71e-87 267
Msa1099910 MtrunA17_Chr8g0389771 45.862 290 145 4 14 296 88 372 3.73e-87 266
Msa1099910 MtrunA17_Chr5g0399221 40.968 310 163 7 5 305 62 360 4.27e-70 222
Msa1099910 MtrunA17_Chr1g0194311 40.594 303 164 7 8 304 76 368 1.96e-68 218
Msa1099910 MtrunA17_Chr4g0070051 40.523 306 152 9 5 298 53 340 2.16e-67 214
Msa1099910 MtrunA17_Chr7g0258341 39.344 305 155 5 8 296 92 382 3.29e-64 207
Msa1099910 MtrunA17_Chr4g0037751 37.500 296 164 5 3 290 68 350 1.43e-62 202
Msa1099910 MtrunA17_Chr2g0294321 37.338 308 163 6 8 304 58 346 1.05e-61 199
Msa1099910 MtrunA17_Chr8g0345281 38.078 281 153 3 8 277 281 551 1.28e-61 206
Msa1099910 MtrunA17_Chr5g0420831 36.149 296 168 4 3 290 68 350 1.94e-61 199
Msa1099910 MtrunA17_Chr5g0446301 38.908 293 164 7 12 296 67 352 2.41e-61 199
Msa1099910 MtrunA17_Chr7g0265201 38.762 307 155 6 2 296 95 380 7.78e-59 193
Msa1099910 MtrunA17_Chr8g0351871 35.759 316 166 6 5 306 32 324 1.42e-58 191
Msa1099910 MtrunA17_Chr6g0466961 37.209 301 166 6 4 298 38 321 2.02e-58 191
Msa1099910 MtrunA17_Chr2g0295851 36.393 305 161 9 8 304 57 336 1.17e-57 189
Msa1099910 MtrunA17_Chr4g0069881 36.808 307 169 6 4 295 222 518 2.67e-56 190
Msa1099910 MtrunA17_Chr6g0466951 34.551 301 174 6 4 298 67 350 1.11e-54 182
Msa1099910 MtrunA17_Chr4g0018371 37.895 285 150 6 8 277 229 501 1.25e-53 183
Msa1099910 MtrunA17_Chr1g0192331 34.824 313 176 6 1 295 209 511 1.32e-52 181
Msa1099910 MtrunA17_Chr4g0011751 33.548 310 179 6 6 298 176 475 2.41e-52 179
Msa1099910 MtrunA17_Chr4g0069841 33.993 303 176 4 8 296 208 500 1.24e-51 177
Msa1099910 MtrunA17_Chr3g0090091 34.629 283 162 5 8 277 218 490 6.14e-51 176
Msa1099910 MtrunA17_Chr1g0192321 33.333 324 185 8 8 316 274 581 1.08e-50 176
Msa1099910 MtrunA17_Chr5g0440871 35.082 305 167 6 8 306 41 320 2.10e-50 170
Msa1099910 MtrunA17_Chr7g0269541 35.430 302 171 4 8 295 248 539 2.81e-50 175
Msa1099910 MtrunA17_Chr7g0272141 35.636 275 159 3 8 277 243 504 2.84e-50 174
Msa1099910 MtrunA17_Chr2g0295531 33.746 323 186 8 8 315 234 543 3.04e-50 176
Msa1099910 MtrunA17_Chr3g0079351 34.276 283 163 5 8 277 217 489 3.76e-50 174
Msa1099910 MtrunA17_Chr3g0079361 33.922 283 164 5 8 277 217 489 1.20e-49 172
Msa1099910 MtrunA17_Chr3g0079341 33.922 283 164 5 8 277 217 489 1.35e-49 172
Msa1099910 MtrunA17_Chr1g0161731 34.007 297 167 5 14 298 57 336 5.37e-49 166
Msa1099910 MtrunA17_Chr7g0269521 33.333 321 185 9 2 306 246 553 1.68e-48 170
Msa1099910 MtrunA17_Chr7g0272151 33.333 324 184 8 8 315 273 580 3.25e-48 170
Msa1099910 MtrunA17_Chr2g0295551 31.269 323 194 7 8 315 252 561 1.98e-47 167
Msa1099910 MtrunA17_Chr1g0195301 33.127 323 184 9 10 316 247 553 2.29e-47 167
Msa1099910 MtrunA17_Chr1g0195321 33.127 323 184 9 10 316 247 553 2.29e-47 167
Msa1099910 MtrunA17_Chr4g0069861 33.775 302 176 4 8 295 209 500 2.30e-47 166
Msa1099910 MtrunA17_Chr4g0011771 33.851 322 182 8 8 316 208 511 3.36e-47 166
Msa1099910 MtrunA17_Chr2g0302021 32.343 303 181 4 8 296 217 509 3.87e-47 166
Msa1099910 MtrunA17_Chr8g0391311 34.397 282 163 4 8 277 232 503 5.83e-47 166
Msa1099910 MtrunA17_Chr7g0269511 34.722 288 162 7 5 277 251 527 6.94e-47 166
Msa1099910 MtrunA17_Chr1g0175661 33.333 291 170 5 1 277 241 521 8.39e-47 166
Msa1099910 MtrunA17_Chr3g0080391 32.660 297 181 4 8 295 271 557 1.17e-46 165
Msa1099910 MtrunA17_Chr3g0080381 34.211 304 172 6 8 294 318 610 1.49e-46 166
Msa1099910 MtrunA17_Chr8g0391291 32.979 282 167 4 8 277 230 501 3.20e-46 164
Msa1099910 MtrunA17_Chr4g0025841 36.220 254 134 5 1 248 32 263 4.70e-46 157
Msa1099910 MtrunA17_Chr1g0195331 32.817 323 185 9 10 316 247 553 5.22e-46 163
Msa1099910 MtrunA17_Chr4g0011791 35.117 299 170 7 8 295 207 492 7.88e-46 162
Msa1099910 MtrunA17_Chr8g0354911 34.859 284 161 4 8 277 302 575 2.24e-45 162
Msa1099910 MtrunA17_Chr7g0269531 31.532 333 191 9 1 314 247 561 2.45e-45 162
Msa1099910 MtrunA17_Chr8g0354901 32.550 298 182 5 8 296 278 565 4.21e-45 161
Msa1099910 MtrunA17_Chr7g0270691 33.227 313 183 8 5 304 239 538 6.13e-45 160
Msa1099910 MtrunA17_Chr8g0384121 33.003 303 173 5 14 295 254 547 6.83e-45 160
Msa1099910 MtrunA17_Chr5g0437831 31.833 311 185 7 8 304 75 372 1.16e-44 156
Msa1099910 MtrunA17_Chr1g0195351 32.817 323 183 10 10 316 247 551 1.20e-44 159
Msa1099910 MtrunA17_Chr4g0067601 33.929 280 165 4 8 277 260 529 1.38e-44 160
Msa1099910 MtrunA17_Chr3g0126771 32.013 303 181 6 8 295 288 580 1.95e-44 160
Msa1099910 MtrunA17_Chr2g0334111 31.752 274 159 4 12 277 32 285 2.39e-44 154
Msa1099910 MtrunA17_Chr7g0233801 31.802 283 170 5 8 277 244 516 6.63e-44 157
Msa1099910 MtrunA17_Chr8g0380581 31.056 322 193 9 8 315 67 373 8.60e-44 154
Msa1099910 MtrunA17_Chr1g0194091 31.699 306 185 6 8 299 255 550 9.33e-44 157
Msa1099910 MtrunA17_Chr1g0192311 31.707 287 171 6 7 278 258 534 1.07e-43 157
Msa1099910 MtrunA17_Chr1g0192281 31.707 287 171 6 7 278 258 534 1.07e-43 157
Msa1099910 MtrunA17_Chr7g0233831 32.155 283 169 5 8 277 245 517 1.42e-43 157
Msa1099910 MtrunA17_Chr1g0147051 33.022 321 183 8 1 304 291 596 1.96e-43 157
Msa1099910 MtrunA17_Chr3g0129921 31.596 307 177 5 12 295 251 547 2.85e-43 156
Msa1099910 MtrunA17_Chr4g0000121 31.944 288 169 7 7 278 245 521 3.90e-43 155
Msa1099910 MtrunA17_Chr8g0345211 33.548 310 179 8 8 304 276 571 6.33e-43 155
Msa1099910 MtrunA17_Chr7g0268241 31.193 327 189 9 2 316 46 348 8.44e-43 150
Msa1099910 MtrunA17_Chr4g0067611 32.500 280 169 3 8 277 260 529 2.07e-42 154
Msa1099910 MtrunA17_Chr1g0192301 32.069 290 166 8 7 278 263 539 2.26e-42 154
Msa1099910 MtrunA17_Chr2g0302001 35.424 271 150 7 39 295 161 420 3.72e-42 150
Msa1099910 MtrunA17_Chr7g0233771 31.449 283 171 5 8 277 244 516 4.86e-42 152
Msa1099910 MtrunA17_Chr7g0234711 38.542 192 106 3 98 277 40 231 8.73e-42 145
Msa1099910 MtrunA17_Chr4g0069891 32.192 292 175 5 8 287 287 567 2.73e-41 151
Msa1099910 MtrunA17_Chr2g0295541 29.296 355 190 8 8 315 252 592 3.28e-41 150
Msa1099910 MtrunA17_Chr2g0314691 40.426 188 102 4 111 290 5 190 5.07e-40 139
Msa1099910 MtrunA17_Chr1g0194081 31.250 288 177 5 8 284 257 534 8.89e-40 146
Msa1099910 MtrunA17_Chr2g0301931 31.022 274 169 4 33 296 14 277 1.52e-39 140
Msa1099910 MtrunA17_Chr1g0195311 34.296 277 153 8 53 316 52 312 1.70e-39 141
Msa1099910 MtrunA17_Chr7g0270651 29.518 332 187 8 8 314 261 570 5.00e-37 139
Msa1099910 MtrunA17_Chr6g0459781 37.640 178 99 4 5 177 12 182 2.65e-36 129
Msa1099910 MtrunA17_Chr7g0270661 30.864 324 191 9 8 313 261 569 3.59e-36 137
Msa1099910 MtrunA17_Chr7g0270671 30.864 324 191 9 8 313 261 569 3.59e-36 137
Msa1099910 MtrunA17_Chr7g0270631 30.104 289 173 4 8 277 797 1075 3.00e-35 135
Msa1099910 MtrunA17_Chr7g0270631 30.345 290 163 5 8 277 249 519 4.14e-35 135
Msa1099910 MtrunA17_Chr7g0265161 36.916 214 112 5 88 296 12 207 1.45e-34 126
Msa1099910 MtrunA17_Chr5g0440901 46.667 135 64 2 119 248 11 142 4.59e-34 122
Msa1099910 MtrunA17_Chr6g0460141 44.030 134 67 3 45 175 16 144 9.44e-30 110
Msa1099910 MtrunA17_Chr7g0271381 28.344 314 180 8 7 290 241 539 1.75e-29 117
Msa1099910 MtrunA17_Chr5g0440891 37.647 170 85 3 8 175 50 200 2.66e-25 100
Msa1099910 MtrunA17_Chr4g0073911 31.282 195 109 5 17 199 19 200 2.15e-20 88.6
Msa1099910 MtrunA17_Chr6g0459791 37.398 123 70 3 185 306 2 118 1.63e-19 82.8
Msa1099910 MtrunA17_Chr5g0437821 31.343 134 80 2 129 250 4 137 1.10e-17 78.2
Msa1099910 MtrunA17_Chr5g0440881 32.593 135 88 1 164 298 5 136 4.01e-17 77.0
Msa1099910 MtrunA17_Chr2g0299431 32.143 140 82 3 8 145 54 182 7.01e-14 70.9
Msa1099910 MtrunA17_Chr2g0314701 32.727 110 63 1 2 111 67 165 7.75e-13 66.6
Msa1099910 MtrunA17_Chr5g0444991 39.506 81 46 1 174 254 1 78 1.83e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1099910 AT3G29090.1 81.230 309 58 0 8 316 9 317 0.0 536
Msa1099910 AT5G19730.1 47.279 294 141 4 10 296 90 376 1.79e-87 267
Msa1099910 AT2G21610.1 39.542 306 160 6 3 304 48 332 1.37e-71 226
Msa1099910 AT2G21610.2 39.542 306 160 6 3 304 53 337 1.99e-71 225
Msa1099910 AT5G47500.1 38.782 312 171 7 5 307 60 360 3.91e-70 222
Msa1099910 AT2G36700.1 39.482 309 162 5 5 304 41 333 1.90e-68 217
Msa1099910 AT2G36710.1 38.462 312 164 5 5 304 90 385 7.79e-67 215
Msa1099910 AT3G17060.1 38.636 308 159 7 8 304 48 336 4.89e-66 211
Msa1099910 AT5G07430.1 37.540 309 171 5 2 304 63 355 4.63e-65 209
Msa1099910 AT1G05310.1 38.782 312 160 5 8 304 93 388 1.44e-64 209
Msa1099910 AT5G61680.1 37.459 307 169 5 5 304 68 358 4.12e-64 207
Msa1099910 AT1G69940.1 36.213 301 171 5 2 295 63 349 3.51e-63 204
Msa1099910 AT5G55590.1 39.799 299 165 5 5 295 81 372 3.38e-62 202
Msa1099910 AT5G07420.1 37.037 297 168 4 5 295 66 349 4.10e-62 201
Msa1099910 AT5G07410.1 35.548 301 173 5 2 295 63 349 2.29e-60 197
Msa1099910 AT5G55590.2 40.927 259 138 5 5 255 81 332 1.25e-56 186
Msa1099910 AT4G00190.1 35.806 310 173 7 8 304 167 463 2.01e-55 187
Msa1099910 AT3G06830.1 34.769 325 178 9 8 316 260 566 3.35e-55 188
Msa1099910 AT4G33230.1 35.831 307 171 8 7 298 298 593 1.46e-54 187
Msa1099910 AT5G49180.1 35.430 302 171 6 8 295 262 553 6.56e-54 185
Msa1099910 AT3G05610.1 33.022 321 186 6 8 315 258 562 3.12e-53 185
Msa1099910 AT1G11580.1 35.644 303 169 8 8 295 249 540 5.02e-53 182
Msa1099910 AT1G11580.2 35.644 303 169 8 8 295 270 561 7.67e-53 182
Msa1099910 AT3G05620.1 36.513 304 170 6 8 304 243 530 1.01e-52 181
Msa1099910 AT5G27870.1 32.812 320 186 6 8 314 255 558 2.70e-52 183
Msa1099910 AT1G23200.1 35.948 306 171 6 2 296 247 538 7.50e-52 179
Msa1099910 AT2G26450.1 34.868 304 172 8 7 295 303 595 9.10e-52 180
Msa1099910 AT5G26810.1 35.948 306 172 5 7 298 35 330 3.62e-51 172
Msa1099910 AT3G24130.1 34.098 305 168 7 8 296 36 323 6.14e-51 172
Msa1099910 AT4G03930.1 33.022 321 187 8 8 316 218 522 1.84e-50 175
Msa1099910 AT3G14310.1 35.106 282 162 3 7 277 283 554 1.90e-50 176
Msa1099910 AT1G53830.1 35.314 303 172 4 7 295 278 570 2.21e-50 176
Msa1099910 AT5G18990.1 32.459 305 173 5 8 296 31 318 5.82e-50 169
Msa1099910 AT4G02300.1 35.082 305 172 7 7 296 223 516 1.47e-49 173
Msa1099910 AT5G64640.1 35.127 316 171 8 7 298 290 595 2.07e-49 174
Msa1099910 AT3G43270.1 36.299 281 158 3 8 277 217 487 5.66e-49 171
Msa1099910 AT1G11370.1 34.940 249 141 3 8 245 48 286 8.07e-49 165
Msa1099910 AT4G02320.1 33.540 322 184 6 8 315 210 515 9.88e-49 170
Msa1099910 AT3G27980.1 32.399 321 189 7 8 316 191 495 1.03e-48 170
Msa1099910 AT2G47040.1 34.375 288 169 5 4 279 282 561 1.17e-48 171
Msa1099910 AT2G47280.1 33.962 318 176 7 3 306 32 329 1.87e-48 165
Msa1099910 AT1G11590.1 32.399 321 189 7 8 316 218 522 2.16e-48 169
Msa1099910 AT2G47030.1 34.266 286 168 4 6 279 277 554 3.75e-48 170
Msa1099910 AT4G02330.1 32.476 311 184 5 1 295 254 554 6.80e-48 169
Msa1099910 AT2G19150.1 32.692 312 187 5 3 306 38 334 8.20e-48 164
Msa1099910 AT4G15980.1 32.822 326 183 8 8 316 394 700 8.62e-48 171
Msa1099910 AT4G15980.2 32.822 326 183 8 8 316 404 710 9.20e-48 171
Msa1099910 AT5G09760.1 33.013 312 180 4 7 298 242 544 1.05e-47 168
Msa1099910 AT3G62170.1 32.986 288 173 5 4 279 275 554 1.54e-47 168
Msa1099910 AT5G09760.2 33.013 312 180 4 7 298 268 570 1.57e-47 168
Msa1099910 AT2G45220.1 34.551 301 170 7 8 295 209 495 1.66e-47 167
Msa1099910 AT3G10710.1 33.893 298 178 5 8 296 258 545 1.69e-47 168
Msa1099910 AT5G04960.1 32.602 319 189 7 8 316 260 562 2.45e-47 167
Msa1099910 AT3G10720.2 34.304 309 172 7 15 306 312 606 2.47e-47 168
Msa1099910 AT2G26440.1 35.336 283 158 4 8 277 240 510 8.27e-47 166
Msa1099910 AT1G02810.1 33.677 291 169 4 1 277 260 540 1.77e-46 165
Msa1099910 AT2G47550.1 33.438 320 184 6 3 306 243 549 1.94e-46 165
Msa1099910 AT4G33220.2 32.673 303 180 4 7 295 93 385 1.75e-45 159
Msa1099910 AT3G60730.1 31.646 316 186 7 6 304 206 508 4.48e-45 160
Msa1099910 AT3G59010.1 32.237 304 182 6 8 304 231 517 5.48e-45 160
Msa1099910 AT2G43050.1 32.550 298 179 5 8 296 216 500 1.49e-44 159
Msa1099910 AT4G33220.1 32.673 303 180 4 7 295 214 506 1.64e-44 159
Msa1099910 AT3G49220.1 33.333 303 177 5 8 295 287 579 1.71e-44 160
Msa1099910 AT1G53840.1 32.441 299 182 5 7 295 282 570 1.84e-44 160
Msa1099910 AT3G49220.3 33.333 303 177 5 8 295 332 624 2.64e-44 160
Msa1099910 AT5G51490.1 35.640 289 153 6 8 277 224 498 5.63e-44 158
Msa1099910 AT5G20860.2 32.588 313 178 10 8 304 232 527 8.20e-44 157
Msa1099910 AT5G04970.1 31.329 316 188 6 7 306 309 611 1.28e-43 158
Msa1099910 AT3G10720.1 36.596 235 133 4 85 306 19 250 2.92e-43 149
Msa1099910 AT3G14300.1 31.646 316 192 8 7 310 662 965 3.37e-43 159
Msa1099910 AT3G47400.1 34.155 284 163 8 8 277 283 556 4.68e-42 153
Msa1099910 AT5G53370.1 32.907 313 182 6 7 304 275 574 1.73e-41 152
Msa1099910 AT5G53370.2 32.907 313 182 6 7 304 311 610 1.85e-41 152
Msa1099910 AT5G51500.1 34.035 285 163 5 8 277 228 502 3.45e-41 150
Msa1099910 AT2G19150.2 33.465 254 149 4 3 248 38 279 8.47e-39 139
Msa1099910 AT5G20860.1 28.169 284 148 6 8 277 232 473 7.39e-33 127
Msa1099910 AT1G44980.1 30.233 172 110 2 8 179 80 241 4.25e-20 88.2

Find 101 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACAAGTTGGCTGGGATAAC+TGG 0.230659 7_3:-29178066 Msa1099910:CDS
TTCTCTTTCCGGCAGGGTTC+AGG 0.246459 7_3:-29179649 Msa1099910:intron
CACCAATTTGCTCGATTTGA+TGG 0.259447 7_3:+29177424 None:intergenic
TGGTAATAGCACTGCTCTTT+TGG 0.274556 7_3:-29178926 Msa1099910:CDS
AGGAAATCTCATACAGAAAA+AGG 0.276238 7_3:+29177219 None:intergenic
GGAAGCGTTGATTTCATCTT+TGG 0.290346 7_3:-29178946 Msa1099910:CDS
GTAACTACATACAGGTGTTT+TGG 0.297278 7_3:-29177460 Msa1099910:intron
TGGTCTCTGTACATAGGTTT+TGG 0.317197 7_3:-29176888 Msa1099910:three_prime_UTR
ACTATTATCAAATTACTTTC+AGG 0.329101 7_3:+29177108 None:intergenic
TTCTACAATTGTAGGTTCCT+TGG 0.339872 7_3:-29179586 Msa1099910:CDS
GATGTGCCTTCTACAATTGT+AGG 0.341539 7_3:-29179594 Msa1099910:CDS
GGACGACCATGGGGACCTTT+TGG 0.343712 7_3:-29178130 Msa1099910:CDS
AGCCAAGATCTATCTGGTTC+TGG 0.369784 7_3:+29177346 None:intergenic
GAGCATTTCTACGCAGAATA+TGG 0.387250 7_3:+29177298 None:intergenic
GTCCATCAAATCGAGCAAAT+TGG 0.388940 7_3:-29177426 Msa1099910:CDS
TGAGCAAGCCAAGATCTATC+TGG 0.389043 7_3:+29177340 None:intergenic
TTGCAGCCTGCTAGGGTGAT+TGG 0.389420 7_3:-29180485 Msa1099910:intron
CCTGCTAGGGTGATTGGAAC+TGG 0.391611 7_3:-29180479 Msa1099910:CDS
ACTGTCATCCGTGTGTCTCC+TGG 0.394558 7_3:-29181718 Msa1099910:CDS
GGACATTCATATGCATATCT+TGG 0.394910 7_3:-29178151 Msa1099910:CDS
TCACTACCACACAATATTGC+AGG 0.396776 7_3:+29176999 None:intergenic
ACCGTTTCACAGAACGGAAC+CGG 0.404772 7_3:-29181799 Msa1099910:CDS
ACCGGCTGCTTATAGATTCC+AGG 0.406968 7_3:+29181700 None:intergenic
GTGATTGGAACTGGGACGTT+TGG 0.414318 7_3:-29180470 Msa1099910:CDS
GATTTATTGTTTGAGACAAA+TGG 0.418300 7_3:+29181952 None:intergenic
TTGAAAGATTGCTATATTGA+AGG 0.418388 7_3:-29178967 Msa1099910:CDS
CATTGCAGATGTGTTATAAC+AGG 0.425498 7_3:-29178181 Msa1099910:intron
TCCGGTTCCGTTCTGTGAAA+CGG 0.431791 7_3:+29181798 None:intergenic
CATATCCACTGCAAGTCTGC+AGG 0.435769 7_3:-29178895 Msa1099910:CDS
ATCTTGGCTTGCTCAAAGAA+TGG 0.443117 7_3:-29177332 Msa1099910:CDS
AAACAGATGAAAATACTATC+AGG 0.445478 7_3:+29177199 None:intergenic
TTGCTCAAAGAATGGGTTTG+AGG 0.447737 7_3:-29177324 Msa1099910:CDS
TGTCTTTGCATACACTTACA+TGG 0.454323 7_3:-29178101 Msa1099910:CDS
ATCCAGAACCAGATAGATCT+TGG 0.455442 7_3:-29177348 Msa1099910:CDS
TTGCACCGTTTGAAAATCTC+CGG 0.457171 7_3:+29181780 None:intergenic
AGCAAATTGGTGTAGAGAAC+TGG 0.458026 7_3:-29177413 Msa1099910:CDS
ACAAGTTGGCTGGGATAACT+GGG 0.459654 7_3:-29178065 Msa1099910:CDS
TCTTGGCTTGCTCAAAGAAT+GGG 0.463869 7_3:-29177331 Msa1099910:CDS
TTGTAGGTTCCTTGGATGGC+AGG 0.473136 7_3:-29179578 Msa1099910:intron
AAATATAAATAAAGTTATGT+TGG 0.475411 7_3:-29176908 Msa1099910:three_prime_UTR
GTGAGGATACTGTGCTTACT+TGG 0.476074 7_3:-29181630 Msa1099910:CDS
AAGGAACCTACAATTGTAGA+AGG 0.478928 7_3:+29179588 None:intergenic
AAATCATCGCAGGAAGCAAC+TGG 0.482057 7_3:-29178850 Msa1099910:CDS
CTGGAACATAGTAGAAGAGT+TGG 0.483501 7_3:-29182032 None:intergenic
GCGAGAGTTGCCGAGGGGTA+CGG 0.483886 7_3:+29181744 None:intergenic
TTATGTTGGTCTCTGTACAT+AGG 0.484588 7_3:-29176894 Msa1099910:three_prime_UTR
TGCATATCTTGGACGACCAT+GGG 0.485305 7_3:-29178140 Msa1099910:CDS
AAAATTTCATCACTCTTGCT+GGG 0.497993 7_3:-29181660 Msa1099910:CDS
TGGAAGTACCATTGTGGAAG+GGG 0.498792 7_3:-29180444 Msa1099910:CDS
CGTGTGTAAGACAAGTTGGC+TGG 0.498941 7_3:-29178075 Msa1099910:CDS
TTTCCGGCAGGGTTCAGGAC+AGG 0.503742 7_3:-29179644 Msa1099910:intron
TACTTGAACATCATAAAGAC+AGG 0.517025 7_3:-29181984 Msa1099910:five_prime_UTR
TGAATCAGTTGAGGAAATGC+TGG 0.518098 7_3:-29177248 Msa1099910:three_prime_UTR
CCAGTTCCAATCACCCTAGC+AGG 0.525758 7_3:+29180479 None:intergenic
TTACAGAGAAGGAAAATAGA+TGG 0.533764 7_3:-29177133 Msa1099910:three_prime_UTR
AGATGTGTTATAACAGGTAA+TGG 0.535089 7_3:-29178175 Msa1099910:CDS
GGAACTGGGACGTTTGGTTG+TGG 0.537408 7_3:-29180464 Msa1099910:CDS
TCCTGGAATCTATAAGCAGC+CGG 0.539453 7_3:-29181701 Msa1099910:CDS
CGATTTGATGGACAGCAACC+AGG 0.542857 7_3:+29177436 None:intergenic
GCAAAGACAACCCTTCCAAA+AGG 0.544112 7_3:+29178115 None:intergenic
GTTTAGAGTCATTACAGAGA+AGG 0.550282 7_3:-29177144 Msa1099910:three_prime_UTR
ACAATTGTAGGTTCCTTGGA+TGG 0.551660 7_3:-29179582 Msa1099910:CDS
GCAGGGTTCAGGACAGGCAG+TGG 0.559283 7_3:-29179638 Msa1099910:intron
TCTGGTTCTGGATCGATGAA+AGG 0.560073 7_3:+29177358 None:intergenic
ATGCATATCTTGGACGACCA+TGG 0.560477 7_3:-29178141 Msa1099910:CDS
CTGCTAGGGTGATTGGAACT+GGG 0.568123 7_3:-29180478 Msa1099910:CDS
GACACATTGTATTTACACTA+CGG 0.572935 7_3:-29179000 Msa1099910:CDS
CAGTACGGCGAGAGTTGCCG+AGG 0.574631 7_3:+29181737 None:intergenic
CAACTGGTTATGTATTCTTG+AGG 0.582694 7_3:-29178834 Msa1099910:intron
GAGACACACGGATGACAGTA+CGG 0.584547 7_3:+29181722 None:intergenic
ATATCCACTGCAAGTCTGCA+GGG 0.587199 7_3:-29178894 Msa1099910:CDS
CACTACCACACAATATTGCA+GGG 0.593261 7_3:+29177000 None:intergenic
GCAATCGACGCCGTACCCCT+CGG 0.594431 7_3:-29181754 Msa1099910:CDS
TGAACCCTGCAGACTTGCAG+TGG 0.596152 7_3:+29178890 None:intergenic
CTGGAGTTACCTGCCATCCA+AGG 0.599000 7_3:+29179569 None:intergenic
TGTGGAAGTACCATTGTGGA+AGG 0.603430 7_3:-29180446 Msa1099910:CDS
GATCCGTGTGTAAGACAAGT+TGG 0.604656 7_3:-29178079 Msa1099910:CDS
GTGTGTAAGACAAGTTGGCT+GGG 0.607583 7_3:-29178074 Msa1099910:CDS
GATGAAGCATGAATCAGTTG+AGG 0.608350 7_3:-29177257 Msa1099910:three_prime_UTR
ACCCTTCCAAAAGGTCCCCA+TGG 0.611078 7_3:+29178124 None:intergenic
GTGGAAGTACCATTGTGGAA+GGG 0.617902 7_3:-29180445 Msa1099910:CDS
ACAGAGTAGAAAATCATCGC+AGG 0.619179 7_3:-29178860 Msa1099910:CDS
TGACTCTAAACATTGATACA+TGG 0.620435 7_3:+29177156 None:intergenic
TCTTGCTGGGTTGTGTCGTG+AGG 0.627214 7_3:-29181647 Msa1099910:CDS
AAATACCCTGCAATATTGTG+TGG 0.634768 7_3:-29177005 Msa1099910:three_prime_UTR
GTATACACCGTTTCACAGAA+CGG 0.640170 7_3:-29181805 Msa1099910:CDS
CAGCCAACTTGTCTTACACA+CGG 0.640543 7_3:+29178076 None:intergenic
TTCGTCTTAGGAACATACAC+CGG 0.642711 7_3:+29181682 None:intergenic
GCATATCTTGGACGACCATG+GGG 0.645401 7_3:-29178139 Msa1099910:CDS
AAGTACCATTGTGGAAGGGG+AGG 0.656420 7_3:-29180441 Msa1099910:CDS
TGTGTTATAACAGGTAATGG+AGG 0.662155 7_3:-29178172 Msa1099910:CDS
TATAGATTCCAGGAGACACA+CGG 0.668494 7_3:+29181710 None:intergenic
AAAGTCCTCCCCTTCCACAA+TGG 0.668810 7_3:+29180436 None:intergenic
AAATTGGTGTAGAGAACTGG+TGG 0.684406 7_3:-29177410 Msa1099910:CDS
TCAGTTGAGGAAATGCTGGA+TGG 0.691528 7_3:-29177244 Msa1099910:three_prime_UTR
ATACATGGATCATAAAGACA+TGG 0.691866 7_3:+29177171 None:intergenic
ACTTGAACATCATAAAGACA+GGG 0.712660 7_3:-29181983 Msa1099910:five_prime_UTR
AAGTTGGCTGGGATAACTGG+GGG 0.713469 7_3:-29178063 Msa1099910:CDS
CAAGTTGGCTGGGATAACTG+GGG 0.717032 7_3:-29178064 Msa1099910:CDS
TGGTTGTGGAAGTACCATTG+TGG 0.723345 7_3:-29180450 Msa1099910:CDS
GTACGGCGAGAGTTGCCGAG+GGG 0.788928 7_3:+29181739 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTTTTTTTTTTTTT+GGG - chr7_3:29178339-29178358 Msa1099910:intron 0.0%
!! AAAAAAAATAAAAAAATAAA+GGG + chr7_3:29182010-29182029 None:intergenic 0.0%
!! TAAAAAAAATAAAAAAATAA+AGG + chr7_3:29182011-29182030 None:intergenic 0.0%
!!! ATTAAGTTTATAATGTTTTT+TGG - chr7_3:29177666-29177685 Msa1099910:intron 10.0%
!! TATAAATTCTATATATATGA+TGG - chr7_3:29180207-29180226 Msa1099910:intron 10.0%
!! ATATTTGAAAAAGTAATAAA+TGG - chr7_3:29180455-29180474 Msa1099910:CDS 10.0%
!! AAATATAAATAAAGTTATGT+TGG - chr7_3:29181956-29181975 Msa1099910:five_prime_UTR 10.0%
!!! TAATTTTCTCAAATTATTAG+CGG - chr7_3:29177828-29177847 Msa1099910:intron 15.0%
!! ATAGAATTTAAACAGAATTT+AGG + chr7_3:29179799-29179818 None:intergenic 15.0%
!! TAAATTCTGTTTAAATTCTA+TGG - chr7_3:29179798-29179817 Msa1099910:intron 15.0%
!! ACAAATCAGTAATATTAATA+AGG - chr7_3:29180429-29180448 Msa1099910:CDS 15.0%
!! CAAATCAGTAATATTAATAA+GGG - chr7_3:29180430-29180449 Msa1099910:CDS 15.0%
!! AAATCAGTAATATTAATAAG+GGG - chr7_3:29180431-29180450 Msa1099910:CDS 15.0%
!!! ATTTTTGTTATAGAAAGTAA+AGG - chr7_3:29181284-29181303 Msa1099910:intron 15.0%
!! TTGGATTAAAAATAGAAAAG+CGG - chr7_3:29176851-29176870 Msa1099910:three_prime_UTR 20.0%
!!! TTCTTTGTGTTTTAATCATT+TGG - chr7_3:29177303-29177322 Msa1099910:exon 20.0%
!!! TCTTTGTGTTTTAATCATTT+GGG - chr7_3:29177304-29177323 Msa1099910:exon 20.0%
!!! TAATTGGTAATTGAAATTGT+AGG - chr7_3:29177540-29177559 Msa1099910:intron 20.0%
!!! AAGTTTATAATGTTTTTTGG+TGG - chr7_3:29177669-29177688 Msa1099910:intron 20.0%
!!! TTTCGAATATTGATAATATG+TGG - chr7_3:29178160-29178179 Msa1099910:CDS 20.0%
!!! TTTTTAATGTTGCATCTATA+TGG - chr7_3:29178284-29178303 Msa1099910:intron 20.0%
!! GTATTTATATGAGAGAATAA+TGG - chr7_3:29178962-29178981 Msa1099910:CDS 20.0%
!!! TTTGGAACTTTTTCATATAT+AGG - chr7_3:29178989-29179008 Msa1099910:CDS 20.0%
!!! TTGGAACTTTTTCATATATA+GGG - chr7_3:29178990-29179009 Msa1099910:CDS 20.0%
!!! GTAAATTTATTACATGGTTT+TGG - chr7_3:29179084-29179103 Msa1099910:intron 20.0%
!! ATCAAACTCTTTAATCTAAT+TGG + chr7_3:29179135-29179154 None:intergenic 20.0%
!! AATTAGATTAAAGAGTTTGA+TGG - chr7_3:29179134-29179153 Msa1099910:intron 20.0%
!! GGAAAAACAAGTATTATATA+AGG + chr7_3:29179195-29179214 None:intergenic 20.0%
!!! CATTTTTTAACACATTCATA+AGG + chr7_3:29179457-29179476 None:intergenic 20.0%
!! AATAATTTGAAAAATGGAAG+TGG + chr7_3:29179688-29179707 None:intergenic 20.0%
!!! TCCATTTTTCAAATTATTAG+CGG - chr7_3:29179690-29179709 Msa1099910:intron 20.0%
!!! AATTATTTTTCTCGTGATTA+TGG - chr7_3:29179836-29179855 Msa1099910:intron 20.0%
!! ATTAAAAATATGAGGCATAT+GGG + chr7_3:29180168-29180187 None:intergenic 20.0%
!! AATTAAAAATATGAGGCATA+TGG + chr7_3:29180169-29180188 None:intergenic 20.0%
!! TGTGTTGAATTAAAAATATG+AGG + chr7_3:29180176-29180195 None:intergenic 20.0%
!!! ACAATTTTTTTCTTTCCAAA+AGG - chr7_3:29180512-29180531 Msa1099910:intron 20.0%
!! GAAGTTATATTTAGGAATAA+AGG - chr7_3:29180534-29180553 Msa1099910:intron 20.0%
!! TTATATTTAGGAATAAAGGT+AGG - chr7_3:29180538-29180557 Msa1099910:intron 20.0%
!! AAATACTTTAATGAACCAAA+AGG + chr7_3:29180640-29180659 None:intergenic 20.0%
!! AATCATAAAACATTACAGAA+TGG + chr7_3:29180889-29180908 None:intergenic 20.0%
!! ATTCAAATCCTATATTCTTA+AGG - chr7_3:29181053-29181072 Msa1099910:intron 20.0%
!! TATAAACTGAATACAACTTA+TGG + chr7_3:29181197-29181216 None:intergenic 20.0%
!! ACTATTATCAAATTACTTTC+AGG + chr7_3:29181759-29181778 None:intergenic 20.0%
!! TAAAAAAATAAAGGGTTCAT+GGG + chr7_3:29182002-29182021 None:intergenic 20.0%
!! ATAAAAAAATAAAGGGTTCA+TGG + chr7_3:29182003-29182022 None:intergenic 20.0%
!! GATTTATTGTTTGAGACAAA+TGG + chr7_3:29176915-29176934 None:intergenic 25.0%
!!! TTTGGAGAAGAAAGTTTTAT+GGG + chr7_3:29177026-29177045 None:intergenic 25.0%
!!! TTTTGGAGAAGAAAGTTTTA+TGG + chr7_3:29177027-29177046 None:intergenic 25.0%
! AAAACTTTCTTCTCCAAAAA+TGG - chr7_3:29177028-29177047 Msa1099910:three_prime_UTR 25.0%
!!! CTTTGTGTTTTAATCATTTG+GGG - chr7_3:29177305-29177324 Msa1099910:exon 25.0%
!!! TTTTAATCATTTGGGGTAAT+GGG - chr7_3:29177312-29177331 Msa1099910:CDS 25.0%
!! CATTTTTCATCTATGAAACA+CGG - chr7_3:29177359-29177378 Msa1099910:CDS 25.0%
! CAATTACCAATTACCAATTT+GGG + chr7_3:29177533-29177552 None:intergenic 25.0%
! TCAATTACCAATTACCAATT+TGG + chr7_3:29177534-29177553 None:intergenic 25.0%
! TTTAGTGTAATTACAAGTGT+CGG + chr7_3:29177803-29177822 None:intergenic 25.0%
! TTGATGAAATATTCAGAATG+AGG - chr7_3:29178101-29178120 Msa1099910:CDS 25.0%
! TGATGAAATATTCAGAATGA+GGG - chr7_3:29178102-29178121 Msa1099910:CDS 25.0%
! TCAATATTCGAAAAGATCTA+TGG + chr7_3:29178153-29178172 None:intergenic 25.0%
! TACAATTTGAAGACCAATTT+GGG - chr7_3:29178201-29178220 Msa1099910:intron 25.0%
!!! TTTTTTTTTTTTTGGGGTTG+TGG - chr7_3:29178346-29178365 Msa1099910:intron 25.0%
! CTTAGTTTAATGTTGAACTT+AGG + chr7_3:29178652-29178671 None:intergenic 25.0%
! TTTAGTGTTTACCAAAATCA+TGG - chr7_3:29178846-29178865 Msa1099910:CDS 25.0%
! TGAGAGAATAATGGTAAATT+TGG - chr7_3:29178971-29178990 Msa1099910:CDS 25.0%
!!! CTTTTTCATATATAGGGATT+TGG - chr7_3:29178996-29179015 Msa1099910:CDS 25.0%
! CTGTGTGTAAATTTATTACA+TGG - chr7_3:29179078-29179097 Msa1099910:intron 25.0%
!! GTATTATATAAGGTATTCCA+CGG + chr7_3:29179185-29179204 None:intergenic 25.0%
! TAAACTGATACATCAAGATA+GGG + chr7_3:29179334-29179353 None:intergenic 25.0%
! ATAAACTGATACATCAAGAT+AGG + chr7_3:29179335-29179354 None:intergenic 25.0%
!! GTTTATGATGTTTTTCATGT+TGG - chr7_3:29179368-29179387 Msa1099910:intron 25.0%
! AGGAAAACTTAATTCTATGA+AGG + chr7_3:29179437-29179456 None:intergenic 25.0%
! GAATGTGTTAAAAAATGCAT+TGG - chr7_3:29179460-29179479 Msa1099910:intron 25.0%
! TGGTTAAGTGATATATTTGT+TGG - chr7_3:29179480-29179499 Msa1099910:intron 25.0%
! ACCGCTAATAATTTGAAAAA+TGG + chr7_3:29179694-29179713 None:intergenic 25.0%
! GAGAAAAATAATTATCTGGT+CGG + chr7_3:29179829-29179848 None:intergenic 25.0%
! TCACGAGAAAAATAATTATC+TGG + chr7_3:29179833-29179852 None:intergenic 25.0%
! TTGAAAGATTGCTATATTGA+AGG - chr7_3:29179897-29179916 Msa1099910:intron 25.0%
! TTGAAACAAGGCTTATATTT+AGG - chr7_3:29180488-29180507 Msa1099910:intron 25.0%
! TCCAAAAGGAAGTTATATTT+AGG - chr7_3:29180526-29180545 Msa1099910:intron 25.0%
!! TCCTAAATATAACTTCCTTT+TGG + chr7_3:29180530-29180549 None:intergenic 25.0%
!!! TAAAGTATTTTACAACTGAG+TGG - chr7_3:29180650-29180669 Msa1099910:intron 25.0%
! AATATAACCTCCATTCATAA+TGG + chr7_3:29180916-29180935 None:intergenic 25.0%
!! GATTATGCTAGAAATTTTCA+TGG - chr7_3:29180991-29181010 Msa1099910:intron 25.0%
! TCAAATAAACCAATCAAAAG+AGG + chr7_3:29181103-29181122 None:intergenic 25.0%
! ACCAGGATAACTTAATAAAA+CGG - chr7_3:29181230-29181249 Msa1099910:intron 25.0%
!! GATTCAAATTGTTTTCGTAT+CGG + chr7_3:29181256-29181275 None:intergenic 25.0%
!! TTACGAGATAAATTTTGCAT+AGG + chr7_3:29181357-29181376 None:intergenic 25.0%
! ATTATGTTGTAACTACATAC+AGG - chr7_3:29181396-29181415 Msa1099910:intron 25.0%
! AAACAGATGAAAATACTATC+AGG + chr7_3:29181668-29181687 None:intergenic 25.0%
TACTTGAACATCATAAAGAC+AGG - chr7_3:29176880-29176899 Msa1099910:three_prime_UTR 30.0%
ACTTGAACATCATAAAGACA+GGG - chr7_3:29176881-29176900 Msa1099910:three_prime_UTR 30.0%
!!! TTTTATGGGTTTGGTGTTAA+TGG + chr7_3:29177012-29177031 None:intergenic 30.0%
!! AGAAGAAAGTTTTATGGGTT+TGG + chr7_3:29177021-29177040 None:intergenic 30.0%
! GTGATGAAATTTTTCGTCTT+AGG + chr7_3:29177197-29177216 None:intergenic 30.0%
AAAAATTTCATCACTCTTGC+TGG - chr7_3:29177203-29177222 Msa1099910:three_prime_UTR 30.0%
AAAATTTCATCACTCTTGCT+GGG - chr7_3:29177204-29177223 Msa1099910:three_prime_UTR 30.0%
!! GTTTTAATCATTTGGGGTAA+TGG - chr7_3:29177311-29177330 Msa1099910:CDS 30.0%
TTGAACATAATCCGATATGT+CGG - chr7_3:29177449-29177468 Msa1099910:CDS 30.0%
! TAAATGCCCAAATTGGTAAT+TGG - chr7_3:29177524-29177543 Msa1099910:intron 30.0%
! TGCAACTTCGTGTATTATTT+TGG + chr7_3:29177601-29177620 None:intergenic 30.0%
AGGTAACTAAGATCCATTTA+AGG - chr7_3:29177952-29177971 Msa1099910:intron 30.0%
GGTAACTAAGATCCATTTAA+GGG - chr7_3:29177953-29177972 Msa1099910:intron 30.0%
GTAACTAAGATCCATTTAAG+GGG - chr7_3:29177954-29177973 Msa1099910:intron 30.0%
! GGAAAAACATTTGTTGAAAG+AGG + chr7_3:29177984-29178003 None:intergenic 30.0%
! AAATGTTTTTCCATACGCAT+TGG - chr7_3:29177992-29178011 Msa1099910:intron 30.0%
! ATATTGATAATATGTGGACG+AGG - chr7_3:29178166-29178185 Msa1099910:CDS 30.0%
!! CAAATTGGTCTTCAAATTGT+AGG + chr7_3:29178202-29178221 None:intergenic 30.0%
CTACAATTTGAAGACCAATT+TGG - chr7_3:29178200-29178219 Msa1099910:intron 30.0%
!! TACTCGATGTTTTGTTCATT+TGG - chr7_3:29178228-29178247 Msa1099910:intron 30.0%
!! ACTCGATGTTTTGTTCATTT+GGG - chr7_3:29178229-29178248 Msa1099910:intron 30.0%
!! TTTTGTTCATTTGGGGTAAT+GGG - chr7_3:29178237-29178256 Msa1099910:intron 30.0%
! AAGTAAACAAGTGATGGAAA+AGG + chr7_3:29178549-29178568 None:intergenic 30.0%
TTTACTTTGCTGAATGGTAT+TGG - chr7_3:29178562-29178581 Msa1099910:intron 30.0%
!! ATCAATTCTCTGAGATTTAG+AGG + chr7_3:29178682-29178701 None:intergenic 30.0%
TTACAAATGTAGCGTATGTT+TGG - chr7_3:29178811-29178830 Msa1099910:intron 30.0%
!!! CTAATCTTTTTAAGTCAACG+TGG + chr7_3:29178879-29178898 None:intergenic 30.0%
AAGCTTCAATAAAATTGCAG+TGG - chr7_3:29178904-29178923 Msa1099910:CDS 30.0%
AAATTGCAGTGGAAATAGTT+TGG - chr7_3:29178915-29178934 Msa1099910:CDS 30.0%
AATTGCAGTGGAAATAGTTT+GGG - chr7_3:29178916-29178935 Msa1099910:CDS 30.0%
ATAAATACTGCAGAAATGTC+TGG + chr7_3:29178950-29178969 None:intergenic 30.0%
GGATCTATATCTTAAGCAAT+CGG + chr7_3:29179027-29179046 None:intergenic 30.0%
ATGGAACACAATTTATATCC+AGG - chr7_3:29179153-29179172 Msa1099910:intron 30.0%
CTTGATGTATCAGTTTATGT+AGG - chr7_3:29179337-29179356 Msa1099910:intron 30.0%
ACAATTATTCTTGAGACAAC+AGG + chr7_3:29179545-29179564 None:intergenic 30.0%
!! AAATAAGACCAACTAGTCTT+CGG + chr7_3:29179594-29179613 None:intergenic 30.0%
!!! ATCAGTGTTGTTTTTTTGAG+CGG - chr7_3:29179722-29179741 Msa1099910:intron 30.0%
! TTGTTGTTGTGTCTGATATA+CGG - chr7_3:29179761-29179780 Msa1099910:intron 30.0%
GACACATTGTATTTACACTA+CGG - chr7_3:29179864-29179883 Msa1099910:intron 30.0%
ATAAGATTGTTAACAGTGGA+TGG + chr7_3:29180070-29180089 None:intergenic 30.0%
GTAGATAAGATTGTTAACAG+TGG + chr7_3:29180074-29180093 None:intergenic 30.0%
AACAACTAAAACACGATGAT+GGG + chr7_3:29180099-29180118 None:intergenic 30.0%
TAACAACTAAAACACGATGA+TGG + chr7_3:29180100-29180119 None:intergenic 30.0%
!! ATTGCCACTTTGTTATACTA+AGG - chr7_3:29180243-29180262 Msa1099910:intron 30.0%
! TAGAAGAATGGTTCGATTTT+AGG - chr7_3:29180292-29180311 Msa1099910:intron 30.0%
! GTATTCGTAAATACTAGTCT+AGG + chr7_3:29180363-29180382 None:intergenic 30.0%
GTACTCATCTATACACAAAA+AGG + chr7_3:29180385-29180404 None:intergenic 30.0%
ATAACATAAGGAAAGAATCC+CGG + chr7_3:29180614-29180633 None:intergenic 30.0%
AGATGTGTTATAACAGGTAA+TGG - chr7_3:29180689-29180708 Msa1099910:intron 30.0%
ATGATTCACACCATTATGAA+TGG - chr7_3:29180903-29180922 Msa1099910:intron 30.0%
GATCAATGCCTTAAGAATAT+AGG + chr7_3:29181064-29181083 None:intergenic 30.0%
TATATTTGCATTAACTGACC+AGG - chr7_3:29181213-29181232 Msa1099910:intron 30.0%
AGAAAGTAAAGGTTGTAGTT+CGG - chr7_3:29181295-29181314 Msa1099910:intron 30.0%
AGGAAATCTCATACAGAAAA+AGG + chr7_3:29181648-29181667 None:intergenic 30.0%
ATACATGGATCATAAAGACA+TGG + chr7_3:29181696-29181715 None:intergenic 30.0%
TGACTCTAAACATTGATACA+TGG + chr7_3:29181711-29181730 None:intergenic 30.0%
TTACAGAGAAGGAAAATAGA+TGG - chr7_3:29181731-29181750 Msa1099910:CDS 30.0%
!!! TATACAGATGCTGCCATTTT+TGG + chr7_3:29177044-29177063 None:intergenic 35.0%
GGCATTTACTCAGAAAACAT+TGG + chr7_3:29177512-29177531 None:intergenic 35.0%
TTCTGAGTAAATGCCCAAAT+TGG - chr7_3:29177517-29177536 Msa1099910:intron 35.0%
AAATTGTCGCTCTGTTTGTA+GGG - chr7_3:29177632-29177651 Msa1099910:intron 35.0%
ATGGATCTTAGTTACCTTGA+GGG + chr7_3:29177949-29177968 None:intergenic 35.0%
AATGGATCTTAGTTACCTTG+AGG + chr7_3:29177950-29177969 None:intergenic 35.0%
! TCTCTAACCATTTTGTCCAT+GGG + chr7_3:29178029-29178048 None:intergenic 35.0%
! ATCTCTAACCATTTTGTCCA+TGG + chr7_3:29178030-29178049 None:intergenic 35.0%
CATCGAGTAAATACCCAAAT+TGG + chr7_3:29178217-29178236 None:intergenic 35.0%
!! CTCGATGTTTTGTTCATTTG+GGG - chr7_3:29178230-29178249 Msa1099910:intron 35.0%
!! GTTTTGTTCATTTGGGGTAA+TGG - chr7_3:29178236-29178255 Msa1099910:intron 35.0%
TTGCATCTATATGGTTTAGC+TGG - chr7_3:29178293-29178312 Msa1099910:intron 35.0%
TTAGCTGGTATGTGTCAAAA+TGG - chr7_3:29178308-29178327 Msa1099910:intron 35.0%
AATTTCACATGCATTACCTC+AGG + chr7_3:29178487-29178506 None:intergenic 35.0%
TCAGCAAAGTAAACAAGTGA+TGG + chr7_3:29178555-29178574 None:intergenic 35.0%
CACTTGTTTACTTTGCTGAA+TGG - chr7_3:29178556-29178575 Msa1099910:intron 35.0%
AGATACTAGATACTGACAAC+GGG + chr7_3:29178758-29178777 None:intergenic 35.0%
CAGATACTAGATACTGACAA+CGG + chr7_3:29178759-29178778 None:intergenic 35.0%
!! GTATCTGACATGTTGATAGT+CGG - chr7_3:29178772-29178791 Msa1099910:intron 35.0%
!! TATCTGACATGTTGATAGTC+GGG - chr7_3:29178773-29178792 Msa1099910:intron 35.0%
! GTGGTTTTTCACCATGATTT+TGG + chr7_3:29178860-29178879 None:intergenic 35.0%
GACAACAGACTTAATGTCAA+TGG + chr7_3:29179048-29179067 None:intergenic 35.0%
!! CTTGTTTTTCCTTCTCTTTC+CGG - chr7_3:29179204-29179223 Msa1099910:intron 35.0%
AAGGAACCTACAATTGTAGA+AGG + chr7_3:29179279-29179298 None:intergenic 35.0%
TTCTACAATTGTAGGTTCCT+TGG - chr7_3:29179278-29179297 Msa1099910:intron 35.0%
ACATCAAGATAGGGTCAAAA+TGG + chr7_3:29179325-29179344 None:intergenic 35.0%
!!! GTTGGATGAGTTTTTTGTGT+AGG - chr7_3:29179498-29179517 Msa1099910:intron 35.0%
TTGAATGTAACCACATGTGT+TGG + chr7_3:29179665-29179684 None:intergenic 35.0%
AGTGTAAATACAATGTGTCC+TGG + chr7_3:29179863-29179882 None:intergenic 35.0%
CAACTGGTTATGTATTCTTG+AGG - chr7_3:29180030-29180049 Msa1099910:intron 35.0%
GTTGCCTTAGTATAACAAAG+TGG + chr7_3:29180250-29180269 None:intergenic 35.0%
TCTTCTACCACAAACATTGA+GGG + chr7_3:29180279-29180298 None:intergenic 35.0%
TTCTTCTACCACAAACATTG+AGG + chr7_3:29180280-29180299 None:intergenic 35.0%
CAATGTTTGTGGTAGAAGAA+TGG - chr7_3:29180280-29180299 Msa1099910:intron 35.0%
! GTGTTGGCATTAGTAAAACA+TGG - chr7_3:29180318-29180337 Msa1099910:intron 35.0%
! TCCTTATGTTATCGACCTTT+TGG - chr7_3:29180622-29180641 Msa1099910:intron 35.0%
ACCAAAAGGTCGATAACATA+AGG + chr7_3:29180626-29180645 None:intergenic 35.0%
! TTTTACAACTGAGTGGTTTC+CGG - chr7_3:29180657-29180676 Msa1099910:intron 35.0%
CTGTTATAACACATCTGCAA+TGG + chr7_3:29180685-29180704 None:intergenic 35.0%
CATTGCAGATGTGTTATAAC+AGG - chr7_3:29180683-29180702 Msa1099910:intron 35.0%
! TGTGTTATAACAGGTAATGG+AGG - chr7_3:29180692-29180711 Msa1099910:intron 35.0%
GGACATTCATATGCATATCT+TGG - chr7_3:29180713-29180732 Msa1099910:intron 35.0%
TGTCTTTGCATACACTTACA+TGG - chr7_3:29180763-29180782 Msa1099910:intron 35.0%
!! GTGCTTGCTTTTATGAATAC+AGG - chr7_3:29180843-29180862 Msa1099910:intron 35.0%
ATTCACACCATTATGAATGG+AGG - chr7_3:29180906-29180925 Msa1099910:intron 35.0%
AAAAGTAGCACTTTGCTTAG+TGG + chr7_3:29181030-29181049 None:intergenic 35.0%
! ATTGATCCCCAGAGTATTAA+GGG - chr7_3:29181077-29181096 Msa1099910:intron 35.0%
! TATTAAGGGCCTCTTTTGAT+TGG - chr7_3:29181091-29181110 Msa1099910:intron 35.0%
!! GCCGTTTTATTAAGTTATCC+TGG + chr7_3:29181234-29181253 None:intergenic 35.0%
GAAAGTAAAGGTTGTAGTTC+GGG - chr7_3:29181296-29181315 Msa1099910:intron 35.0%
AAAGTAAAGGTTGTAGTTCG+GGG - chr7_3:29181297-29181316 Msa1099910:intron 35.0%
! GTAACTACATACAGGTGTTT+TGG - chr7_3:29181404-29181423 Msa1099910:intron 35.0%
! GTTTAGAGTCATTACAGAGA+AGG - chr7_3:29181720-29181739 Msa1099910:CDS 35.0%
AAATACCCTGCAATATTGTG+TGG - chr7_3:29181859-29181878 Msa1099910:five_prime_UTR 35.0%
! TTATGTTGGTCTCTGTACAT+AGG - chr7_3:29181970-29181989 Msa1099910:five_prime_UTR 35.0%
GTATACACCGTTTCACAGAA+CGG - chr7_3:29177059-29177078 Msa1099910:three_prime_UTR 40.0%
TTGCACCGTTTGAAAATCTC+CGG + chr7_3:29177087-29177106 None:intergenic 40.0%
TATAGATTCCAGGAGACACA+CGG + chr7_3:29177157-29177176 None:intergenic 40.0%
TTCGTCTTAGGAACATACAC+CGG + chr7_3:29177185-29177204 None:intergenic 40.0%
CAAATTGTCGCTCTGTTTGT+AGG - chr7_3:29177631-29177650 Msa1099910:intron 40.0%
ATGAAGCACAGATACAGACA+CGG + chr7_3:29177881-29177900 None:intergenic 40.0%
TGTCTGTATCTGTGCTTCAT+AGG - chr7_3:29177881-29177900 Msa1099910:intron 40.0%
TGGATCTTAGTTACCTTGAG+GGG + chr7_3:29177948-29177967 None:intergenic 40.0%
AAAGAGGTCAACCCCTTAAA+TGG + chr7_3:29177968-29177987 None:intergenic 40.0%
!! TTTTTCCATACGCATTGGTC+AGG - chr7_3:29177997-29178016 Msa1099910:intron 40.0%
! AATTTTTGTTGCAGCCTGCT+AGG - chr7_3:29178371-29178390 Msa1099910:intron 40.0%
! ATTTTTGTTGCAGCCTGCTA+GGG - chr7_3:29178372-29178391 Msa1099910:intron 40.0%
GATGTGCCTTCTACAATTGT+AGG - chr7_3:29179270-29179289 Msa1099910:intron 40.0%
ACAATTGTAGGTTCCTTGGA+TGG - chr7_3:29179282-29179301 Msa1099910:intron 40.0%
ATAGGGTCAAAATGGAGTAC+TGG + chr7_3:29179317-29179336 None:intergenic 40.0%
!! TCTTAAGTGTCGGTGTTTCA+TGG + chr7_3:29179618-29179637 None:intergenic 40.0%
AAACACCGACACTTAAGACT+GGG - chr7_3:29179620-29179639 Msa1099910:CDS 40.0%
! TTTTCTCGTGATTATGGTCC+AGG - chr7_3:29179842-29179861 Msa1099910:intron 40.0%
!! GGAAGCGTTGATTTCATCTT+TGG - chr7_3:29179918-29179937 Msa1099910:intron 40.0%
! TGGTAATAGCACTGCTCTTT+TGG - chr7_3:29179938-29179957 Msa1099910:intron 40.0%
! CGATGATTTTCTACTCTGTG+CGG + chr7_3:29180003-29180022 None:intergenic 40.0%
ACAGAGTAGAAAATCATCGC+AGG - chr7_3:29180004-29180023 Msa1099910:intron 40.0%
AGATTGTTAACAGTGGATGG+CGG + chr7_3:29180067-29180086 None:intergenic 40.0%
!! AACTAAAACACGATGATGGG+TGG + chr7_3:29180096-29180115 None:intergenic 40.0%
CTTCTACCACAAACATTGAG+GGG + chr7_3:29180278-29180297 None:intergenic 40.0%
!! GTTCGATTTTAGGAGTGTGT+TGG - chr7_3:29180302-29180321 Msa1099910:intron 40.0%
!! GGATCTAGCACTTTGAAACA+AGG - chr7_3:29180476-29180495 Msa1099910:CDS 40.0%
!! AGAGCTCTAGAAACTAGGAA+AGG + chr7_3:29180587-29180606 None:intergenic 40.0%
!! GAACAAGAGCTCTAGAAACT+AGG + chr7_3:29180592-29180611 None:intergenic 40.0%
!! AGTTTCTAGAGCTCTTGTTC+CGG - chr7_3:29180592-29180611 Msa1099910:intron 40.0%
! CATTGATCCCCAGAGTATTA+AGG - chr7_3:29181076-29181095 Msa1099910:intron 40.0%
AAAGAGGCCCTTAATACTCT+GGG + chr7_3:29181087-29181106 None:intergenic 40.0%
AAAAGAGGCCCTTAATACTC+TGG + chr7_3:29181088-29181107 None:intergenic 40.0%
GTCCATCAAATCGAGCAAAT+TGG - chr7_3:29181438-29181457 Msa1099910:intron 40.0%
! CACCAATTTGCTCGATTTGA+TGG + chr7_3:29181443-29181462 None:intergenic 40.0%
AGCAAATTGGTGTAGAGAAC+TGG - chr7_3:29181451-29181470 Msa1099910:intron 40.0%
AAATTGGTGTAGAGAACTGG+TGG - chr7_3:29181454-29181473 Msa1099910:intron 40.0%
ATCCAGAACCAGATAGATCT+TGG - chr7_3:29181516-29181535 Msa1099910:intron 40.0%
!! ATCTTGGCTTGCTCAAAGAA+TGG - chr7_3:29181532-29181551 Msa1099910:intron 40.0%
!! TCTTGGCTTGCTCAAAGAAT+GGG - chr7_3:29181533-29181552 Msa1099910:intron 40.0%
! TTGCTCAAAGAATGGGTTTG+AGG - chr7_3:29181540-29181559 Msa1099910:intron 40.0%
GAGCATTTCTACGCAGAATA+TGG + chr7_3:29181569-29181588 None:intergenic 40.0%
GATGAAGCATGAATCAGTTG+AGG - chr7_3:29181607-29181626 Msa1099910:CDS 40.0%
TGAATCAGTTGAGGAAATGC+TGG - chr7_3:29181616-29181635 Msa1099910:CDS 40.0%
CACTACCACACAATATTGCA+GGG + chr7_3:29181867-29181886 None:intergenic 40.0%
TCACTACCACACAATATTGC+AGG + chr7_3:29181868-29181887 None:intergenic 40.0%
! TGGTCTCTGTACATAGGTTT+TGG - chr7_3:29181976-29181995 Msa1099910:five_prime_UTR 40.0%
! CGGAACCGGAGATTTTCAAA+CGG - chr7_3:29177079-29177098 Msa1099910:three_prime_UTR 45.0%
TCCTGGAATCTATAAGCAGC+CGG - chr7_3:29177163-29177182 Msa1099910:three_prime_UTR 45.0%
GTGAGGATACTGTGCTTACT+TGG - chr7_3:29177234-29177253 Msa1099910:three_prime_UTR 45.0%
TTGTGGGCGGAGAATATCTT+TGG + chr7_3:29177699-29177718 None:intergenic 45.0%
TGCTTCAACAGTGCAGTTGT+GGG + chr7_3:29177715-29177734 None:intergenic 45.0%
GCATCAACCCATGGACAAAA+TGG - chr7_3:29178019-29178038 Msa1099910:intron 45.0%
!! TGGTTGTGGAAGTACCATTG+TGG - chr7_3:29178414-29178433 Msa1099910:intron 45.0%
!! TGTGGAAGTACCATTGTGGA+AGG - chr7_3:29178418-29178437 Msa1099910:intron 45.0%
!! GTGGAAGTACCATTGTGGAA+GGG - chr7_3:29178419-29178438 Msa1099910:intron 45.0%
!! TGGAAGTACCATTGTGGAAG+GGG - chr7_3:29178420-29178439 Msa1099910:intron 45.0%
!! TTTTGAGAACTCTGCACCTG+AGG - chr7_3:29178468-29178487 Msa1099910:intron 45.0%
! GTGATGGAAAAGGAACTAGC+AGG + chr7_3:29178539-29178558 None:intergenic 45.0%
AAACGTGCATAAGTGCGTGT+TGG - chr7_3:29178591-29178610 Msa1099910:intron 45.0%
! CATAAGTGCGTGTTGGTAGA+GGG - chr7_3:29178598-29178617 Msa1099910:intron 45.0%
CTAGATACTGACAACGGGAA+GGG + chr7_3:29178753-29178772 None:intergenic 45.0%
ACTAGATACTGACAACGGGA+AGG + chr7_3:29178754-29178773 None:intergenic 45.0%
!! GTAGCGTATGTTTGGTTCTG+CGG - chr7_3:29178819-29178838 Msa1099910:intron 45.0%
TTATATCCAGGCACAAACCG+TGG - chr7_3:29179165-29179184 Msa1099910:intron 45.0%
! TTTTTCCTTCTCTTTCCGGC+AGG - chr7_3:29179208-29179227 Msa1099910:intron 45.0%
! TTTTCCTTCTCTTTCCGGCA+GGG - chr7_3:29179209-29179228 Msa1099910:intron 45.0%
CTTGAGACAACAGGCTAGAA+AGG + chr7_3:29179536-29179555 None:intergenic 45.0%
GAAACACCGACACTTAAGAC+TGG - chr7_3:29179619-29179638 Msa1099910:CDS 45.0%
TGAGACCCAGTCTTAAGTGT+CGG + chr7_3:29179628-29179647 None:intergenic 45.0%
ACACTTAAGACTGGGTCTCA+AGG - chr7_3:29179628-29179647 Msa1099910:CDS 45.0%
ATATCCACTGCAAGTCTGCA+GGG - chr7_3:29179970-29179989 Msa1099910:intron 45.0%
AAATCATCGCAGGAAGCAAC+TGG - chr7_3:29180014-29180033 Msa1099910:intron 45.0%
GTCTCTGATACGCATAGAGT+TGG - chr7_3:29180140-29180159 Msa1099910:intron 45.0%
!! GTTTCTAGAGCTCTTGTTCC+GGG - chr7_3:29180593-29180612 Msa1099910:intron 45.0%
TAACACATCTGCAATGGCAC+CGG + chr7_3:29180679-29180698 None:intergenic 45.0%
ATGCATATCTTGGACGACCA+TGG - chr7_3:29180723-29180742 Msa1099910:intron 45.0%
TGCATATCTTGGACGACCAT+GGG - chr7_3:29180724-29180743 Msa1099910:intron 45.0%
GCAAAGACAACCCTTCCAAA+AGG + chr7_3:29180752-29180771 None:intergenic 45.0%
GATCCGTGTGTAAGACAAGT+TGG - chr7_3:29180785-29180804 Msa1099910:intron 45.0%
CAGCCAACTTGTCTTACACA+CGG + chr7_3:29180791-29180810 None:intergenic 45.0%
! GTGTGTAAGACAAGTTGGCT+GGG - chr7_3:29180790-29180809 Msa1099910:intron 45.0%
! ACAAGTTGGCTGGGATAACT+GGG - chr7_3:29180799-29180818 Msa1099910:intron 45.0%
AAGAGGCCCTTAATACTCTG+GGG + chr7_3:29181086-29181105 None:intergenic 45.0%
!! ACATACAGGTGTTTTGGACC+TGG - chr7_3:29181410-29181429 Msa1099910:intron 45.0%
!! TCTGGTTCTGGATCGATGAA+AGG + chr7_3:29181509-29181528 None:intergenic 45.0%
! AGCCAAGATCTATCTGGTTC+TGG + chr7_3:29181521-29181540 None:intergenic 45.0%
TGAGCAAGCCAAGATCTATC+TGG + chr7_3:29181527-29181546 None:intergenic 45.0%
TCAGTTGAGGAAATGCTGGA+TGG - chr7_3:29181620-29181639 Msa1099910:CDS 45.0%
!!! CTTAATTTTTTTTTTTTTTT+TGG - chr7_3:29178338-29178357 Msa1099910:intron 5.0%
!!! TAATTTTTTTTTTTTTTTTG+GGG - chr7_3:29178340-29178359 Msa1099910:intron 5.0%
ACCGTTTCACAGAACGGAAC+CGG - chr7_3:29177065-29177084 Msa1099910:three_prime_UTR 50.0%
TCCGGTTCCGTTCTGTGAAA+CGG + chr7_3:29177069-29177088 None:intergenic 50.0%
GAGACACACGGATGACAGTA+CGG + chr7_3:29177145-29177164 None:intergenic 50.0%
ACCGGCTGCTTATAGATTCC+AGG + chr7_3:29177167-29177186 None:intergenic 50.0%
! ATCCGATATGTCGGTGCTCA+TGG - chr7_3:29177458-29177477 Msa1099910:intron 50.0%
! TCCGATATGTCGGTGCTCAT+GGG - chr7_3:29177459-29177478 Msa1099910:intron 50.0%
!! ACCCATGAGCACCGACATAT+CGG + chr7_3:29177463-29177482 None:intergenic 50.0%
TTCAACAGTGCAGTTGTGGG+CGG + chr7_3:29177712-29177731 None:intergenic 50.0%
GTGCTTCAACAGTGCAGTTG+TGG + chr7_3:29177716-29177735 None:intergenic 50.0%
GTTGAAGCACAGACACTCCT+CGG - chr7_3:29177726-29177745 Msa1099910:intron 50.0%
TTGAAGCACAGACACTCCTC+GGG - chr7_3:29177727-29177746 Msa1099910:intron 50.0%
ACAGATACAGACACGGACAC+CGG + chr7_3:29177874-29177893 None:intergenic 50.0%
!! ACCTTGAGGGGATTAGTCAG+TGG + chr7_3:29177936-29177955 None:intergenic 50.0%
TGATGCCTGACCAATGCGTA+TGG + chr7_3:29178005-29178024 None:intergenic 50.0%
ATTGGTCAGGCATCAACCCA+TGG - chr7_3:29178010-29178029 Msa1099910:intron 50.0%
CTGCTAGGGTGATTGGAACT+GGG - chr7_3:29178386-29178405 Msa1099910:intron 50.0%
GTGATTGGAACTGGGACGTT+TGG - chr7_3:29178394-29178413 Msa1099910:intron 50.0%
AAGTACCATTGTGGAAGGGG+AGG - chr7_3:29178423-29178442 Msa1099910:intron 50.0%
AAAGTCCTCCCCTTCCACAA+TGG + chr7_3:29178431-29178450 None:intergenic 50.0%
AGGAGCAAACACGCTGGATT+TGG + chr7_3:29178519-29178538 None:intergenic 50.0%
! GCATAAGTGCGTGTTGGTAG+AGG - chr7_3:29178597-29178616 Msa1099910:intron 50.0%
TTGTAGGTTCCTTGGATGGC+AGG - chr7_3:29179286-29179305 Msa1099910:intron 50.0%
GCTGTGATCCGAAGACTAGT+TGG - chr7_3:29179583-29179602 Msa1099910:CDS 50.0%
! GTAACCACATGTGTTGGTGC+CGG + chr7_3:29179659-29179678 None:intergenic 50.0%
CATATCCACTGCAAGTCTGC+AGG - chr7_3:29179969-29179988 Msa1099910:intron 50.0%
CGTTCTCCCCTCAATGTTTG+TGG - chr7_3:29180269-29180288 Msa1099910:intron 50.0%
GCATATCTTGGACGACCATG+GGG - chr7_3:29180725-29180744 Msa1099910:intron 50.0%
!! ACCATGGGGACCTTTTGGAA+GGG - chr7_3:29180739-29180758 Msa1099910:intron 50.0%
! CGTGTGTAAGACAAGTTGGC+TGG - chr7_3:29180789-29180808 Msa1099910:intron 50.0%
! GACAAGTTGGCTGGGATAAC+TGG - chr7_3:29180798-29180817 Msa1099910:intron 50.0%
! CAAGTTGGCTGGGATAACTG+GGG - chr7_3:29180800-29180819 Msa1099910:intron 50.0%
AAGTTGGCTGGGATAACTGG+GGG - chr7_3:29180801-29180820 Msa1099910:intron 50.0%
GGGGGAAAGTAGAGAATGAG+AGG - chr7_3:29180819-29180838 Msa1099910:intron 50.0%
TCAAATTCTCGTGCAGCGTC+TGG - chr7_3:29181324-29181343 Msa1099910:intron 50.0%
! CGATTTGATGGACAGCAACC+AGG + chr7_3:29181431-29181450 None:intergenic 50.0%
ACTGTCATCCGTGTGTCTCC+TGG - chr7_3:29177146-29177165 Msa1099910:three_prime_UTR 55.0%
TCTTGCTGGGTTGTGTCGTG+AGG - chr7_3:29177217-29177236 Msa1099910:three_prime_UTR 55.0%
ACACGAACGTGTACGACACC+GGG + chr7_3:29177763-29177782 None:intergenic 55.0%
GACACGAACGTGTACGACAC+CGG + chr7_3:29177764-29177783 None:intergenic 55.0%
!! TGTCGGTGTCGTGTCAGTGT+CGG + chr7_3:29177786-29177805 None:intergenic 55.0%
GTCAGTGTCCTTGTCGTGTC+CGG - chr7_3:29177852-29177871 Msa1099910:intron 55.0%
TGAAGCACGGATACGGACAG+TGG + chr7_3:29177908-29177927 None:intergenic 55.0%
TGTCCGTATCCGTGCTTCAC+AGG - chr7_3:29177909-29177928 Msa1099910:intron 55.0%
GTCCGTATCCGTGCTTCACA+GGG - chr7_3:29177910-29177929 Msa1099910:intron 55.0%
! GCCACTGACTAATCCCCTCA+AGG - chr7_3:29177932-29177951 Msa1099910:intron 55.0%
TTGCAGCCTGCTAGGGTGAT+TGG - chr7_3:29178379-29178398 Msa1099910:intron 55.0%
CCAGTTCCAATCACCCTAGC+AGG + chr7_3:29178388-29178407 None:intergenic 55.0%
CCTGCTAGGGTGATTGGAAC+TGG - chr7_3:29178385-29178404 Msa1099910:intron 55.0%
GGAACTGGGACGTTTGGTTG+TGG - chr7_3:29178400-29178419 Msa1099910:intron 55.0%
ACTAGCAGGAGCAAACACGC+TGG + chr7_3:29178525-29178544 None:intergenic 55.0%
GGTATTCCACGGTTTGTGCC+TGG + chr7_3:29179174-29179193 None:intergenic 55.0%
TGAACCCTGCCGGAAAGAGA+AGG + chr7_3:29179216-29179235 None:intergenic 55.0%
TTCTCTTTCCGGCAGGGTTC+AGG - chr7_3:29179215-29179234 Msa1099910:intron 55.0%
CTGGAGTTACCTGCCATCCA+AGG + chr7_3:29179298-29179317 None:intergenic 55.0%
TGAACCCTGCAGACTTGCAG+TGG + chr7_3:29179977-29179996 None:intergenic 55.0%
! GACCATGGGGACCTTTTGGA+AGG - chr7_3:29180738-29180757 Msa1099910:intron 55.0%
ACCCTTCCAAAAGGTCCCCA+TGG + chr7_3:29180743-29180762 None:intergenic 55.0%
AGTACGGCGAGAGTTGCCGA+GGG + chr7_3:29177129-29177148 None:intergenic 60.0%
GCACAGACACTCCTCGGGTT+AGG - chr7_3:29177732-29177751 Msa1099910:intron 60.0%
GGCCCTGTGAAGCACGGATA+CGG + chr7_3:29177915-29177934 None:intergenic 60.0%
GTCAGTGGCCCTGTGAAGCA+CGG + chr7_3:29177921-29177940 None:intergenic 60.0%
TTTCCGGCAGGGTTCAGGAC+AGG - chr7_3:29179220-29179239 Msa1099910:intron 60.0%
ACTGGGTCTCAAGGCGTGTC+CGG - chr7_3:29179637-29179656 Msa1099910:CDS 60.0%
GTGTCCGGCACCAACACATG+TGG - chr7_3:29179652-29179671 Msa1099910:intron 60.0%
! GGACGACCATGGGGACCTTT+TGG - chr7_3:29180734-29180753 Msa1099910:intron 60.0%
GCAATCGACGCCGTACCCCT+CGG - chr7_3:29177110-29177129 Msa1099910:three_prime_UTR 65.0%
GCGAGAGTTGCCGAGGGGTA+CGG + chr7_3:29177123-29177142 None:intergenic 65.0%
GTACGGCGAGAGTTGCCGAG+GGG + chr7_3:29177128-29177147 None:intergenic 65.0%
CAGTACGGCGAGAGTTGCCG+AGG + chr7_3:29177130-29177149 None:intergenic 65.0%
! TCCTCGGGTTAGGCGTGTCC+CGG - chr7_3:29177742-29177761 Msa1099910:intron 65.0%
CACGGACACCGGACACGACA+AGG + chr7_3:29177863-29177882 None:intergenic 65.0%
CTGCCTGTCCTGAACCCTGC+CGG + chr7_3:29179226-29179245 None:intergenic 65.0%
GCAGGGTTCAGGACAGGCAG+TGG - chr7_3:29179226-29179245 Msa1099910:intron 65.0%
ACCGGGACACGCCTAACCCG+AGG + chr7_3:29177746-29177765 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 29176845 29182041 29176845 ID=Msa1099910;Name=Msa1099910
chr7_3 mRNA 29176845 29182041 29176845 ID=Msa1099910-mRNA-1;Parent=Msa1099910;Name=Msa1099910-mRNA-1;_AED=0.09;_eAED=0.09;_QI=202|1|1|1|1|1|6|461|316
chr7_3 exon 29176845 29177468 29176845 ID=Msa1099910-mRNA-1:exon:6157;Parent=Msa1099910-mRNA-1
chr7_3 exon 29178022 29178195 29178022 ID=Msa1099910-mRNA-1:exon:6156;Parent=Msa1099910-mRNA-1
chr7_3 exon 29178835 29179022 29178835 ID=Msa1099910-mRNA-1:exon:6155;Parent=Msa1099910-mRNA-1
chr7_3 exon 29179579 29179656 29179579 ID=Msa1099910-mRNA-1:exon:6154;Parent=Msa1099910-mRNA-1
chr7_3 exon 29180397 29180501 29180397 ID=Msa1099910-mRNA-1:exon:6153;Parent=Msa1099910-mRNA-1
chr7_3 exon 29181597 29182041 29181597 ID=Msa1099910-mRNA-1:exon:6152;Parent=Msa1099910-mRNA-1
chr7_3 five_prime_UTR 29181840 29182041 29181840 ID=Msa1099910-mRNA-1:five_prime_utr;Parent=Msa1099910-mRNA-1
chr7_3 CDS 29181597 29181839 29181597 ID=Msa1099910-mRNA-1:cds;Parent=Msa1099910-mRNA-1
chr7_3 CDS 29180397 29180501 29180397 ID=Msa1099910-mRNA-1:cds;Parent=Msa1099910-mRNA-1
chr7_3 CDS 29179579 29179656 29179579 ID=Msa1099910-mRNA-1:cds;Parent=Msa1099910-mRNA-1
chr7_3 CDS 29178835 29179022 29178835 ID=Msa1099910-mRNA-1:cds;Parent=Msa1099910-mRNA-1
chr7_3 CDS 29178022 29178195 29178022 ID=Msa1099910-mRNA-1:cds;Parent=Msa1099910-mRNA-1
chr7_3 CDS 29177306 29177468 29177306 ID=Msa1099910-mRNA-1:cds;Parent=Msa1099910-mRNA-1
chr7_3 three_prime_UTR 29176845 29177305 29176845 ID=Msa1099910-mRNA-1:three_prime_utr;Parent=Msa1099910-mRNA-1
Gene Sequence

>Msa1099910

ATGGCAGCATCTGTATACACCGTTTCACAGAACGGAACCGGAGATTTTCAAACGGTGCAAGAAGCAATCGACGCCGTACCCCTCGGCAACTCTCGCCGTACTGTCATCCGTGTGTCTCCTGGAATCTATAAGCAGCCGGTGTATGTTCCTAAGACGAAAAATTTCATCACTCTTGCTGGGTTGTGTCGTGAGGATACTGTGCTTACTTGGAATAATACTGCTACTAAGATTGATCATCATCAACCTGCTAGGGTGATTGGAACTGGGACGTTTGGTTGTGGAAGTACCATTGTGGAAGGGGAGGACTTTATTGCTGAGAATATAACTTTTGAGAACTCTGCACCTGAGGGTTCAGGACAGGCAGTGGCAATTAGAGTAACTGCAGATCGATGTGCCTTCTACAATTGTAGGTTCCTTGGATGGCAGGACACATTGTATTTACACTACGGTAAACAATATTTGAAAGATTGCTATATTGAAGGAAGCGTTGATTTCATCTTTGGTAATAGCACTGCTCTTTTGGAGAACTGTCATATCCACTGCAAGTCTGCAGGGTTCATAACCGCACAGAGTAGAAAATCATCGCAGGAAGCAACTGGTTATGTATTCTTGAGATGTGTTATAACAGGTAATGGAGGACATTCATATGCATATCTTGGACGACCATGGGGACCTTTTGGAAGGGTTGTCTTTGCATACACTTACATGGATCCGTGTGTAAGACAAGTTGGCTGGGATAACTGGGGGAAAGTAGAGAATGAGAGGAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCTGTCCATCAAATCGAGCAAATTGGTGTAGAGAACTGGTGGATGAAGAAGCAGAGCAGTTCATCATGCATCCTTTCATCGATCCAGAACCAGATAGATCTTGGCTTGCTCAAAGAATGGGTTTGAGGATTCCATATTCTGCGTAG
Protein sequence

>Msa1099910

MAASVYTVSQNGTGDFQTVQEAIDAVPLGNSRRTVIRVSPGIYKQPVYVPKTKNFITLAGLCREDTVLTWNNTATKIDHHQPARVIGTGTFGCGSTIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLENCHIHCKSAGFITAQSRKSSQEATGYVFLRCVITGNGGHSYAYLGRPWGPFGRVVFAYTYMDPCVRQVGWDNWGKVENERSACFYEYRCFGPGCCPSNRANWCRELVDEEAEQFIMHPFIDPEPDRSWLAQRMGLRIPYSA*