Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229740 | XP_024635165.1 | 94.614 | 427 | 21 | 1 | 1 | 427 | 1 | 425 | 0.0 | 836 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229740 | A0A396IWM7 | 94.614 | 427 | 21 | 1 | 1 | 427 | 1 | 425 | 0.0 | 836 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0229740 | 0.813258 | 2.804092e-51 | -8.615850e-47 |
| Msa0011170 | Msa0229740 | 0.811329 | 7.392642e-51 | -8.615850e-47 |
| Msa0012040 | Msa0229740 | 0.808816 | 2.571639e-50 | -8.615850e-47 |
| Msa0014710 | Msa0229740 | 0.823680 | 1.215809e-53 | -8.615850e-47 |
| Msa0017510 | Msa0229740 | 0.822918 | 1.831470e-53 | -8.615850e-47 |
| Msa0035150 | Msa0229740 | 0.800734 | 1.254509e-48 | -8.615850e-47 |
| Msa0036140 | Msa0229740 | 0.804546 | 2.051315e-49 | -8.615850e-47 |
| Msa0075470 | Msa0229740 | 0.801707 | 7.930153e-49 | -8.615850e-47 |
| Msa0076220 | Msa0229740 | 0.802985 | 4.326065e-49 | -8.615850e-47 |
| Msa0078900 | Msa0229740 | 0.812913 | 3.337115e-51 | -8.615850e-47 |
| Msa0079070 | Msa0229740 | 0.804921 | 1.712591e-49 | -8.615850e-47 |
| Msa0105070 | Msa0229740 | 0.801020 | 1.096582e-48 | -8.615850e-47 |
| Msa0116770 | Msa0229740 | 0.805236 | 1.471526e-49 | -8.615850e-47 |
| Msa0126610 | Msa0229740 | 0.806531 | 7.861982e-50 | -8.615850e-47 |
| Msa0131770 | Msa0229740 | 0.814181 | 1.755713e-51 | -8.615850e-47 |
| Msa0157290 | Msa0229740 | 0.823302 | 1.490454e-53 | -8.615850e-47 |
| Msa0165210 | Msa0229740 | 0.802524 | 5.385977e-49 | -8.615850e-47 |
| Msa0171540 | Msa0229740 | 0.820348 | 7.192919e-53 | -8.615850e-47 |
| Msa0178930 | Msa0229740 | 0.812433 | 4.250177e-51 | -8.615850e-47 |
| Msa0180500 | Msa0229740 | 0.801936 | 7.117356e-49 | -8.615850e-47 |
| Msa0187120 | Msa0229740 | 0.803996 | 2.670558e-49 | -8.615850e-47 |
| Msa0195000 | Msa0229740 | 0.825653 | 4.168978e-54 | -8.615850e-47 |
| Msa0204840 | Msa0229740 | 0.808206 | 3.470160e-50 | -8.615850e-47 |
| Msa0206010 | Msa0229740 | 0.820200 | 7.778395e-53 | -8.615850e-47 |
| Msa0210450 | Msa0229740 | 0.807921 | 3.991745e-50 | -8.615850e-47 |
| Msa0212930 | Msa0229740 | 0.807473 | 4.968475e-50 | -8.615850e-47 |
| Msa0212990 | Msa0229740 | 0.815261 | 1.012396e-51 | -8.615850e-47 |
| Msa0220440 | Msa0229740 | 0.801964 | 7.023952e-49 | -8.615850e-47 |
| Msa0220740 | Msa0229740 | 0.807250 | 5.539586e-50 | -8.615850e-47 |
| Msa0223010 | Msa0229740 | 0.807787 | 4.261985e-50 | -8.615850e-47 |
| Msa0223410 | Msa0229740 | -0.835123 | 2.015093e-56 | -8.615850e-47 |
| Msa0226890 | Msa0229740 | 0.824627 | 7.283626e-54 | -8.615850e-47 |
| Msa0229740 | Msa0237070 | 0.818644 | 1.760240e-52 | -8.615850e-47 |
| Msa0229740 | Msa0237310 | 0.812241 | 4.680778e-51 | -8.615850e-47 |
| Msa0229740 | Msa0243100 | 0.805711 | 1.169870e-49 | -8.615850e-47 |
| Msa0229740 | Msa0243710 | 0.811825 | 5.766654e-51 | -8.615850e-47 |
| Msa0229740 | Msa0253200 | 0.821255 | 4.449021e-53 | -8.615850e-47 |
| Msa0229740 | Msa0259500 | 0.805158 | 1.527547e-49 | -8.615850e-47 |
| Msa0229740 | Msa0264150 | 0.816435 | 5.538808e-52 | -8.615850e-47 |
| Msa0229740 | Msa0274730 | 0.813879 | 2.047291e-51 | -8.615850e-47 |
| Msa0229740 | Msa0283450 | 0.815923 | 7.206685e-52 | -8.615850e-47 |
| Msa0229740 | Msa0287410 | 0.804880 | 1.746983e-49 | -8.615850e-47 |
| Msa0229740 | Msa0287650 | 0.803762 | 2.986398e-49 | -8.615850e-47 |
| Msa0229740 | Msa0292030 | 0.824245 | 8.962734e-54 | -8.615850e-47 |
| Msa0229740 | Msa0305700 | 0.815018 | 1.146209e-51 | -8.615850e-47 |
| Msa0229740 | Msa0315530 | 0.818596 | 1.804809e-52 | -8.615850e-47 |
| Msa0229740 | Msa0319170 | 0.804704 | 1.900870e-49 | -8.615850e-47 |
| Msa0229740 | Msa0326110 | 0.809612 | 1.736080e-50 | -8.615850e-47 |
| Msa0229740 | Msa0330340 | 0.807672 | 4.507889e-50 | -8.615850e-47 |
| Msa0229740 | Msa0332000 | 0.802800 | 4.723303e-49 | -8.615850e-47 |
| Msa0229740 | Msa0336320 | 0.800048 | 1.729875e-48 | -8.615850e-47 |
| Msa0229740 | Msa0339620 | 0.805524 | 1.280276e-49 | -8.615850e-47 |
| Msa0229740 | Msa0340450 | 0.802009 | 6.873632e-49 | -8.615850e-47 |
| Msa0229740 | Msa0344690 | -0.810835 | 9.458598e-51 | -8.615850e-47 |
| Msa0229740 | Msa0344980 | 0.801020 | 1.096612e-48 | -8.615850e-47 |
| Msa0229740 | Msa0345970 | 0.811839 | 5.726738e-51 | -8.615850e-47 |
| Msa0229740 | Msa0363790 | 0.832701 | 8.135782e-56 | -8.615850e-47 |
| Msa0229740 | Msa0367870 | 0.815320 | 9.821527e-52 | -8.615850e-47 |
| Msa0229740 | Msa0373450 | 0.803190 | 3.923076e-49 | -8.615850e-47 |
| Msa0229740 | Msa0373930 | 0.803472 | 3.429147e-49 | -8.615850e-47 |
| Msa0229740 | Msa0376350 | 0.832858 | 7.435271e-56 | -8.615850e-47 |
| Msa0229740 | Msa0379640 | 0.815859 | 7.449544e-52 | -8.615850e-47 |
| Msa0229740 | Msa0387750 | 0.914562 | 1.657884e-84 | -8.615850e-47 |
| Msa0229740 | Msa0388960 | 0.800893 | 1.164111e-48 | -8.615850e-47 |
| Msa0229740 | Msa0393080 | 0.810076 | 1.379850e-50 | -8.615850e-47 |
| Msa0229740 | Msa0410650 | 0.813502 | 2.477964e-51 | -8.615850e-47 |
| Msa0229740 | Msa0420960 | 0.893676 | 5.036556e-75 | -8.615850e-47 |
| Msa0229740 | Msa0424790 | 0.830505 | 2.827719e-55 | -8.615850e-47 |
| Msa0229740 | Msa0433640 | 0.812215 | 4.742800e-51 | -8.615850e-47 |
| Msa0229740 | Msa0439970 | 0.816373 | 5.718892e-52 | -8.615850e-47 |
| Msa0229740 | Msa0440750 | 0.821140 | 4.730955e-53 | -8.615850e-47 |
| Msa0229740 | Msa0455760 | 0.836235 | 1.053609e-56 | -8.615850e-47 |
| Msa0229740 | Msa0466390 | 0.821920 | 3.122985e-53 | -8.615850e-47 |
| Msa0229740 | Msa0467060 | 0.843148 | 1.674701e-58 | -8.615850e-47 |
| Msa0229740 | Msa0481530 | 0.801854 | 7.398663e-49 | -8.615850e-47 |
| Msa0229740 | Msa0483850 | 0.803337 | 3.657720e-49 | -8.615850e-47 |
| Msa0229740 | Msa0484780 | 0.817177 | 3.775660e-52 | -8.615850e-47 |
| Msa0229740 | Msa0488560 | 0.813561 | 2.405488e-51 | -8.615850e-47 |
| Msa0229740 | Msa0495320 | 0.805411 | 1.352492e-49 | -8.615850e-47 |
| Msa0229740 | Msa0507680 | 0.808255 | 3.387508e-50 | -8.615850e-47 |
| Msa0229740 | Msa0512750 | 0.800127 | 1.667498e-48 | -8.615850e-47 |
| Msa0229740 | Msa0512900 | 0.802974 | 4.348287e-49 | -8.615850e-47 |
| Msa0229740 | Msa0516170 | 0.839992 | 1.137080e-57 | -8.615850e-47 |
| Msa0229740 | Msa0519000 | 0.812901 | 3.357790e-51 | -8.615850e-47 |
| Msa0229740 | Msa0529890 | 0.815286 | 9.994269e-52 | -8.615850e-47 |
| Msa0229740 | Msa0545700 | 0.807917 | 3.999196e-50 | -8.615850e-47 |
| Msa0229740 | Msa0555020 | 0.810252 | 1.264068e-50 | -8.615850e-47 |
| Msa0229740 | Msa0576880 | 0.809155 | 2.176095e-50 | -8.615850e-47 |
| Msa0229740 | Msa0585560 | 0.811388 | 7.177195e-51 | -8.615850e-47 |
| Msa0229740 | Msa0602240 | 0.800330 | 1.516042e-48 | -8.615850e-47 |
| Msa0229740 | Msa0602250 | 0.801445 | 8.974874e-49 | -8.615850e-47 |
| Msa0229740 | Msa0608620 | 0.810033 | 1.409498e-50 | -8.615850e-47 |
| Msa0229740 | Msa0610430 | 0.827485 | 1.524232e-54 | -8.615850e-47 |
| Msa0229740 | Msa0625720 | 0.816133 | 6.468830e-52 | -8.615850e-47 |
| Msa0229740 | Msa0629450 | 0.825549 | 4.413101e-54 | -8.615850e-47 |
| Msa0229740 | Msa0657610 | 0.814309 | 1.644783e-51 | -8.615850e-47 |
| Msa0229740 | Msa0657970 | 0.819709 | 1.007357e-52 | -8.615850e-47 |
| Msa0229740 | Msa0661650 | 0.812425 | 4.266540e-51 | -8.615850e-47 |
| Msa0229740 | Msa0663390 | 0.808871 | 2.502395e-50 | -8.615850e-47 |
| Msa0229740 | Msa0663920 | 0.804195 | 2.426597e-49 | -8.615850e-47 |
| Msa0229740 | Msa0667050 | 0.806337 | 8.639361e-50 | -8.615850e-47 |
| Msa0229740 | Msa0673460 | 0.825409 | 4.761582e-54 | -8.615850e-47 |
| Msa0229740 | Msa0683730 | 0.806604 | 7.588505e-50 | -8.615850e-47 |
| Msa0229740 | Msa0685750 | 0.804009 | 2.652953e-49 | -8.615850e-47 |
| Msa0229740 | Msa0692040 | -0.811384 | 7.190768e-51 | -8.615850e-47 |
| Msa0229740 | Msa0692830 | 0.800428 | 1.447777e-48 | -8.615850e-47 |
| Msa0229740 | Msa0692950 | 0.810880 | 9.250924e-51 | -8.615850e-47 |
| Msa0229740 | Msa0693380 | 0.803894 | 2.803133e-49 | -8.615850e-47 |
| Msa0229740 | Msa0695820 | 0.808930 | 2.431242e-50 | -8.615850e-47 |
| Msa0229740 | Msa0703050 | 0.811076 | 8.389217e-51 | -8.615850e-47 |
| Msa0229740 | Msa0711790 | 0.821730 | 3.457280e-53 | -8.615850e-47 |
| Msa0229740 | Msa0715700 | 0.801155 | 1.029059e-48 | -8.615850e-47 |
| Msa0229740 | Msa0716840 | 0.812308 | 4.526087e-51 | -8.615850e-47 |
| Msa0229740 | Msa0724210 | 0.811106 | 8.265426e-51 | -8.615850e-47 |
| Msa0229740 | Msa0735170 | 0.805395 | 1.363027e-49 | -8.615850e-47 |
| Msa0229740 | Msa0743720 | 0.820554 | 6.452334e-53 | -8.615850e-47 |
| Msa0229740 | Msa0762970 | 0.807296 | 5.416749e-50 | -8.615850e-47 |
| Msa0229740 | Msa0777230 | 0.800030 | 1.744602e-48 | -8.615850e-47 |
| Msa0229740 | Msa0793800 | 0.801867 | 7.353512e-49 | -8.615850e-47 |
| Msa0229740 | Msa0805550 | 0.821487 | 3.933479e-53 | -8.615850e-47 |
| Msa0229740 | Msa0806800 | 0.802588 | 5.224179e-49 | -8.615850e-47 |
| Msa0229740 | Msa0810220 | 0.803087 | 4.121818e-49 | -8.615850e-47 |
| Msa0229740 | Msa0820770 | 0.803789 | 2.947510e-49 | -8.615850e-47 |
| Msa0229740 | Msa0820850 | 0.805101 | 1.570465e-49 | -8.615850e-47 |
| Msa0229740 | Msa0824680 | 0.810439 | 1.151926e-50 | -8.615850e-47 |
| Msa0229740 | Msa0830530 | 0.811458 | 6.931236e-51 | -8.615850e-47 |
| Msa0229740 | Msa0832340 | 0.816812 | 4.559428e-52 | -8.615850e-47 |
| Msa0229740 | Msa0835230 | 0.801811 | 7.550013e-49 | -8.615850e-47 |
| Msa0229740 | Msa0838580 | 0.814946 | 1.188926e-51 | -8.615850e-47 |
| Msa0229740 | Msa0844490 | 0.800005 | 1.765020e-48 | -8.615850e-47 |
| Msa0229740 | Msa0844570 | 0.825205 | 5.323091e-54 | -8.615850e-47 |
| Msa0229740 | Msa0857640 | 0.800207 | 1.605859e-48 | -8.615850e-47 |
| Msa0229740 | Msa0861090 | 0.800888 | 1.166526e-48 | -8.615850e-47 |
| Msa0229740 | Msa0861130 | 0.804720 | 1.886700e-49 | -8.615850e-47 |
| Msa0229740 | Msa0880140 | 0.818756 | 1.660162e-52 | -8.615850e-47 |
| Msa0229740 | Msa0896750 | 0.809901 | 1.504699e-50 | -8.615850e-47 |
| Msa0229740 | Msa0897330 | 0.810517 | 1.108028e-50 | -8.615850e-47 |
| Msa0229740 | Msa0923330 | 0.807660 | 4.534466e-50 | -8.615850e-47 |
| Msa0229740 | Msa0927380 | 0.811961 | 5.388742e-51 | -8.615850e-47 |
| Msa0229740 | Msa0933100 | 0.823962 | 1.044112e-53 | -8.615850e-47 |
| Msa0229740 | Msa0947660 | 0.804961 | 1.679626e-49 | -8.615850e-47 |
| Msa0229740 | Msa0969520 | 0.841359 | 4.985558e-58 | -8.615850e-47 |
| Msa0229740 | Msa1003620 | 0.813126 | 2.996504e-51 | -8.615850e-47 |
| Msa0229740 | Msa1014540 | 0.820315 | 7.318296e-53 | -8.615850e-47 |
| Msa0229740 | Msa1019000 | 0.807433 | 5.067270e-50 | -8.615850e-47 |
| Msa0229740 | Msa1023920 | 0.826739 | 2.299786e-54 | -8.615850e-47 |
| Msa0229740 | Msa1030970 | 0.825240 | 5.220930e-54 | -8.615850e-47 |
| Msa0229740 | Msa1041670 | 0.808553 | 2.927278e-50 | -8.615850e-47 |
| Msa0229740 | Msa1046460 | 0.814723 | 1.332057e-51 | -8.615850e-47 |
| Msa0229740 | Msa1054990 | 0.803142 | 4.013574e-49 | -8.615850e-47 |
| Msa0229740 | Msa1062920 | 0.809952 | 1.466980e-50 | -8.615850e-47 |
| Msa0229740 | Msa1070010 | 0.822893 | 1.856234e-53 | -8.615850e-47 |
| Msa0229740 | Msa1075220 | -0.827874 | 1.229492e-54 | -8.615850e-47 |
| Msa0229740 | Msa1075540 | 0.812892 | 3.373258e-51 | -8.615850e-47 |
| Msa0229740 | Msa1075650 | 0.804267 | 2.344494e-49 | -8.615850e-47 |
| Msa0229740 | Msa1079590 | 0.816576 | 5.150902e-52 | -8.615850e-47 |
| Msa0229740 | Msa1081330 | 0.826649 | 2.415651e-54 | -8.615850e-47 |
| Msa0229740 | Msa1082500 | 0.837478 | 5.075867e-57 | -8.615850e-47 |
| Msa0229740 | Msa1085200 | 0.815153 | 1.069397e-51 | -8.615850e-47 |
| Msa0229740 | Msa1099910 | 0.812703 | 3.710400e-51 | -8.615850e-47 |
| Msa0229740 | Msa1100050 | 0.805385 | 1.369708e-49 | -8.615850e-47 |
| Msa0229740 | Msa1107900 | 0.820161 | 7.940262e-53 | -8.615850e-47 |
| Msa0229740 | Msa1113170 | 0.804934 | 1.701742e-49 | -8.615850e-47 |
| Msa0229740 | Msa1116130 | -0.812894 | 3.370067e-51 | -8.615850e-47 |
| Msa0229740 | Msa1129550 | 0.814341 | 1.618637e-51 | -8.615850e-47 |
| Msa0229740 | Msa1129730 | 0.806302 | 8.788490e-50 | -8.615850e-47 |
| Msa0229740 | Msa1131220 | 0.821994 | 3.003081e-53 | -8.615850e-47 |
| Msa0229740 | Msa1137570 | 0.815220 | 1.033409e-51 | -8.615850e-47 |
| Msa0229740 | Msa1154280 | 0.812616 | 3.876911e-51 | -8.615850e-47 |
| Msa0229740 | Msa1162550 | -0.808132 | 3.598999e-50 | -8.615850e-47 |
| Msa0229740 | Msa1166560 | 0.812537 | 4.033278e-51 | -8.615850e-47 |
| Msa0229740 | Msa1174040 | 0.804844 | 1.777099e-49 | -8.615850e-47 |
| Msa0229740 | Msa1199220 | 0.800777 | 1.228926e-48 | -8.615850e-47 |
| Msa0229740 | Msa1204530 | 0.805842 | 1.098157e-49 | -8.615850e-47 |
| Msa0229740 | Msa1204630 | 0.801128 | 1.041961e-48 | -8.615850e-47 |
| Msa0229740 | Msa1212940 | 0.834023 | 3.807723e-56 | -8.615850e-47 |
| Msa0229740 | Msa1253020 | 0.814782 | 1.292787e-51 | -8.615850e-47 |
| Msa0229740 | Msa1277660 | 0.809155 | 2.175439e-50 | -8.615850e-47 |
| Msa0229740 | Msa1279210 | 0.801402 | 9.160176e-49 | -8.615850e-47 |
| Msa0229740 | Msa1284680 | 0.845995 | 2.867256e-59 | -8.615850e-47 |
| Msa0229740 | Msa1299960 | 0.802627 | 5.128187e-49 | -8.615850e-47 |
| Msa0229740 | Msa1305190 | 0.814666 | 1.371914e-51 | -8.615850e-47 |
| Msa0229740 | Msa1305340 | 0.820722 | 5.903362e-53 | -8.615850e-47 |
| Msa0229740 | Msa1306850 | 0.806416 | 8.312248e-50 | -8.615850e-47 |
| Msa0229740 | Msa1306860 | 0.805205 | 1.493443e-49 | -8.615850e-47 |
| Msa0229740 | Msa1308380 | 0.803016 | 4.263204e-49 | -8.615850e-47 |
| Msa0229740 | Msa1309030 | 0.823986 | 1.030774e-53 | -8.615850e-47 |
| Msa0229740 | Msa1322890 | 0.800410 | 1.460389e-48 | -8.615850e-47 |
| Msa0229740 | Msa1327680 | 0.804564 | 2.033025e-49 | -8.615850e-47 |
| Msa0229740 | Msa1331000 | 0.807638 | 4.583494e-50 | -8.615850e-47 |
| Msa0229740 | Msa1357530 | 0.802096 | 6.598571e-49 | -8.615850e-47 |
| Msa0229740 | Msa1359040 | 0.821348 | 4.236129e-53 | -8.615850e-47 |
| Msa0229740 | Msa1360060 | 0.826119 | 3.231172e-54 | -8.615850e-47 |
| Msa0229740 | Msa1372760 | 0.850180 | 2.005825e-60 | -8.615850e-47 |
| Msa0229740 | Msa1384350 | 0.806683 | 7.302518e-50 | -8.615850e-47 |
| Msa0229740 | Msa1392260 | 0.806518 | 7.911019e-50 | -8.615850e-47 |
| Msa0229740 | Msa1392910 | 0.800985 | 1.114386e-48 | -8.615850e-47 |
| Msa0229740 | Msa1402400 | 0.818373 | 2.027545e-52 | -8.615850e-47 |
| Msa0229740 | Msa1409870 | 0.812355 | 4.419874e-51 | -8.615850e-47 |
| Msa0229740 | Msa1409880 | 0.816282 | 5.994086e-52 | -8.615850e-47 |
| Msa0229740 | Msa1410100 | 0.800846 | 1.190056e-48 | -8.615850e-47 |
| Msa0229740 | Msa1416150 | 0.802375 | 5.780356e-49 | -8.615850e-47 |
| Msa0229740 | Msa1419960 | 0.805835 | 1.102063e-49 | -8.615850e-47 |
| Msa0229740 | Msa1427230 | 0.818732 | 1.681527e-52 | -8.615850e-47 |
| Msa0229740 | Msa1429900 | 0.807608 | 4.651749e-50 | -8.615850e-47 |
| Msa0229740 | Msa1460830 | 0.809331 | 1.994821e-50 | -8.615850e-47 |
| Msa0229740 | Msa1464940 | 0.801236 | 9.905457e-49 | -8.615850e-47 |
| Msa0229740 | Msa1466540 | 0.823534 | 1.315319e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229740 | MtrunA17_Chr3g0120781 | 94.614 | 427 | 21 | 1 | 1 | 427 | 1 | 425 | 0.0 | 836 |
| Msa0229740 | MtrunA17_Chr6g0466721 | 79.093 | 397 | 77 | 2 | 31 | 427 | 2 | 392 | 0.0 | 650 |
| Msa0229740 | MtrunA17_Chr3g0120771 | 65.496 | 484 | 108 | 8 | 1 | 427 | 1 | 482 | 0.0 | 603 |
| Msa0229740 | MtrunA17_Chr6g0466711 | 89.888 | 89 | 9 | 0 | 257 | 345 | 1 | 89 | 4.35e-53 | 172 |
| Msa0229740 | MtrunA17_Chr6g0466701 | 70.085 | 117 | 35 | 0 | 24 | 140 | 4 | 120 | 4.16e-52 | 171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229740 | AT4G25330.1 | 33.824 | 204 | 126 | 3 | 21 | 223 | 14 | 209 | 3.26e-32 | 122 |
Find 91 sgRNAs with CRISPR-Local
Find 498 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACAAGAAGCTTGCATTTC+TGG | 0.094771 | 2_2:+1575864 | Msa0229740:CDS |
| ATAACATATATATACTTAAA+TGG | 0.181728 | 2_2:-1576055 | None:intergenic |
| TGAAGGCCTACCTCAGATTT+AGG | 0.217628 | 2_2:-1574941 | None:intergenic |
| GCAGTCAACTTTCCTTCATT+TGG | 0.248052 | 2_2:-1573299 | None:intergenic |
| GAAGATGTTATGATGTAATT+TGG | 0.259481 | 2_2:-1574547 | None:intergenic |
| TCCAGCTGTGGCTTTGTTCT+TGG | 0.265674 | 2_2:+1573370 | Msa0229740:CDS |
| ACCTGTTTCCGTTCAAGTTC+AGG | 0.273946 | 2_2:+1569242 | Msa0229740:CDS |
| GGAAGCTTGTTAAGGGTGTT+AGG | 0.294916 | 2_2:+1569277 | Msa0229740:CDS |
| AATGCAAATGTCACCAATTT+CGG | 0.311234 | 2_2:-1573324 | None:intergenic |
| TTTATCCTGTCCTGGTTACA+TGG | 0.325135 | 2_2:+1573275 | Msa0229740:CDS |
| TTATCTTCCATGCTTTCGTC+AGG | 0.351621 | 2_2:-1574307 | None:intergenic |
| TCAACTCGGTGTAGTGTAGA+AGG | 0.365333 | 2_2:-1568922 | None:intergenic |
| GCTTCTTGTGCAGCCGCACT+TGG | 0.370760 | 2_2:-1575852 | None:intergenic |
| ATCACAATCTGGACAGGAAT+TGG | 0.382289 | 2_2:+1573415 | Msa0229740:CDS |
| TCCTGAACTTGAACGGAAAC+AGG | 0.382857 | 2_2:-1569243 | None:intergenic |
| TACTTAAATGGGAAATAATC+TGG | 0.387959 | 2_2:-1576043 | None:intergenic |
| AAGTTGACTGCTGCCGAAAT+TGG | 0.405877 | 2_2:+1573311 | Msa0229740:CDS |
| TTGTTCAGTGTGCAACATAA+TGG | 0.408316 | 2_2:-1574491 | None:intergenic |
| TGTGTACCTTTATCCTGTCC+TGG | 0.409349 | 2_2:+1573267 | Msa0229740:CDS |
| TGAATGTCGGAAGCTTGTTA+AGG | 0.417479 | 2_2:+1569269 | Msa0229740:CDS |
| TATGGTTACGTTGGAGGAAA+AGG | 0.420140 | 2_2:+1569110 | Msa0229740:CDS |
| AATTTGAAGGTTGTACATTC+AGG | 0.426606 | 2_2:+1575769 | Msa0229740:CDS |
| AAGAACTCTACAGCTGTTGA+TGG | 0.426928 | 2_2:-1574394 | None:intergenic |
| TACACTACACCGAGTTGAAA+TGG | 0.428263 | 2_2:+1568927 | Msa0229740:exon |
| CTTTGTTCTTGGAGATTACA+AGG | 0.432464 | 2_2:+1573381 | Msa0229740:CDS |
| GAATGTCGGAAGCTTGTTAA+GGG | 0.438452 | 2_2:+1569270 | Msa0229740:CDS |
| TAACATATATATACTTAAAT+GGG | 0.444390 | 2_2:-1576054 | None:intergenic |
| GGCACCCACAACAGATCGTT+TGG | 0.446503 | 2_2:-1573651 | None:intergenic |
| ATGTAACCAGGACAGGATAA+AGG | 0.447391 | 2_2:-1573273 | None:intergenic |
| AAACAAACCTTCAGGAGAAC+AGG | 0.449635 | 2_2:-1573672 | None:intergenic |
| CGGTGCATGGTACACCGTTA+TGG | 0.449853 | 2_2:+1569092 | Msa0229740:CDS |
| GTGGGTGCCTGTTCTCCTGA+AGG | 0.452638 | 2_2:+1573665 | Msa0229740:CDS |
| TCATAGAAGCGAAGATCATC+AGG | 0.457906 | 2_2:-1569324 | None:intergenic |
| TACATCATAACATCTTCAAC+TGG | 0.462959 | 2_2:+1574553 | Msa0229740:CDS |
| TCCAAGAACAAAGCCACAGC+TGG | 0.465807 | 2_2:-1573371 | None:intergenic |
| ATTTCTCTCTTCGCCGGCGT+CGG | 0.467245 | 2_2:-1569009 | None:intergenic |
| GAAGCTTGTTAAGGGTGTTA+GGG | 0.472459 | 2_2:+1569278 | Msa0229740:CDS |
| GAAGATATTGTCTTCTTCAT+CGG | 0.481912 | 2_2:-1569163 | None:intergenic |
| TTCATTTGGCCCATGTAACC+AGG | 0.482362 | 2_2:-1573285 | None:intergenic |
| TAGAAGGAGTAGCAATTTGA+AGG | 0.484742 | 2_2:+1575756 | Msa0229740:CDS |
| TGGTTACATGGGCCAAATGA+AGG | 0.494473 | 2_2:+1573287 | Msa0229740:CDS |
| AAAAGGAAACACTTCGAGTA+AGG | 0.495048 | 2_2:+1569127 | Msa0229740:CDS |
| TATATCTCCAATGATAAACT+TGG | 0.495829 | 2_2:-1574457 | None:intergenic |
| CACCGTTATGGTTACGTTGG+AGG | 0.498761 | 2_2:+1569104 | Msa0229740:CDS |
| TCAAGATTGCCAATGCTAAG+AGG | 0.501498 | 2_2:+1575803 | Msa0229740:CDS |
| CACAGGATGGAAACAATAGA+AGG | 0.503654 | 2_2:+1575740 | Msa0229740:CDS |
| TGTCTTTCAGAATGCATCAC+AGG | 0.505039 | 2_2:+1575723 | Msa0229740:intron |
| GTTTCTCTGCCATTTCAACT+CGG | 0.507063 | 2_2:-1568936 | None:intergenic |
| CAAGATTGCCAATGCTAAGA+GGG | 0.507498 | 2_2:+1575804 | Msa0229740:CDS |
| AATGTGTGTATGATTCTGAT+AGG | 0.508534 | 2_2:+1574349 | Msa0229740:CDS |
| CGCGCCAAACGATCTGTTGT+GGG | 0.514658 | 2_2:+1573647 | Msa0229740:CDS |
| ATTCTTCGAAACTCCGACGC+CGG | 0.520295 | 2_2:+1568996 | Msa0229740:CDS |
| TTCCTCCAACGTAACCATAA+CGG | 0.536523 | 2_2:-1569106 | None:intergenic |
| GTGCAACATAATGGCACCCC+TGG | 0.537920 | 2_2:-1574482 | None:intergenic |
| TATCTTCCATGCTTTCGTCA+GGG | 0.539922 | 2_2:-1574306 | None:intergenic |
| TTGGCCCATGTAACCAGGAC+AGG | 0.541376 | 2_2:-1573280 | None:intergenic |
| AGGAGACTAGAATCACAATC+TGG | 0.543384 | 2_2:+1573404 | Msa0229740:CDS |
| TATTCATGAAATCTGAAACT+AGG | 0.544715 | 2_2:+1575894 | Msa0229740:exon |
| ACCCGCATTTCTCTCTTCGC+CGG | 0.544935 | 2_2:-1569015 | None:intergenic |
| CTATGATGCTGTTGTTGATG+CGG | 0.545847 | 2_2:+1569341 | Msa0229740:CDS |
| AAACAAATCCCTCTTAGCAT+TGG | 0.546189 | 2_2:-1575812 | None:intergenic |
| TTCATAATCCTGAACTTGAA+CGG | 0.546295 | 2_2:-1569250 | None:intergenic |
| TTATCCTGTCCTGGTTACAT+GGG | 0.548307 | 2_2:+1573276 | Msa0229740:CDS |
| GCCGGCGAAGAGAGAAATGC+GGG | 0.550980 | 2_2:+1569014 | Msa0229740:CDS |
| ACTAGAATCACAATCTGGAC+AGG | 0.563849 | 2_2:+1573409 | Msa0229740:CDS |
| GAAACTACGAAGACGGTGCA+TGG | 0.564040 | 2_2:+1569079 | Msa0229740:CDS |
| TTGGTTGTGATCTGCCACAA+AGG | 0.566812 | 2_2:+1573434 | Msa0229740:CDS |
| TCATAACATCTTCAACTGGC+AGG | 0.571205 | 2_2:+1574557 | Msa0229740:CDS |
| AAATGGGAAATAATCTGGTA+CGG | 0.574331 | 2_2:-1576038 | None:intergenic |
| AAGCATGGAAGATAAAGAGT+TGG | 0.577522 | 2_2:+1574315 | Msa0229740:CDS |
| AGTCAGCCCTGACGAAAGCA+TGG | 0.581574 | 2_2:+1574300 | Msa0229740:intron |
| ACGCGCCAAACGATCTGTTG+TGG | 0.589617 | 2_2:+1573646 | Msa0229740:CDS |
| CAACTCGGTGTAGTGTAGAA+GGG | 0.603978 | 2_2:-1568921 | None:intergenic |
| ATCATTGGAGATATATACCA+GGG | 0.613270 | 2_2:+1574465 | Msa0229740:CDS |
| AAGTTCAGGATTATGAATGT+CGG | 0.614070 | 2_2:+1569256 | Msa0229740:CDS |
| TATCATTGGAGATATATACC+AGG | 0.616124 | 2_2:+1574464 | Msa0229740:CDS |
| CGGAGTTTCGAAGAATGAAA+CGG | 0.617296 | 2_2:-1568989 | None:intergenic |
| ATGTGTGTATGATTCTGATA+GGG | 0.622574 | 2_2:+1574350 | Msa0229740:CDS |
| TTTCAGAATGCATCACAGGA+TGG | 0.624598 | 2_2:+1575727 | Msa0229740:intron |
| TGCCACACCATGTTTCACAC+TGG | 0.624600 | 2_2:-1576011 | None:intergenic |
| AACACTGTTTCCTAAATCTG+AGG | 0.629543 | 2_2:+1574931 | Msa0229740:CDS |
| ACAAAATCAAAATTACGTCA+CGG | 0.643932 | 2_2:+1569050 | Msa0229740:CDS |
| AAAAGAGCACGATCCAGCTG+TGG | 0.646327 | 2_2:+1573358 | Msa0229740:CDS |
| GTACACCGTTATGGTTACGT+TGG | 0.652740 | 2_2:+1569101 | Msa0229740:CDS |
| GAATTTCGAAACTACGAAGA+CGG | 0.658399 | 2_2:+1569072 | Msa0229740:CDS |
| AATTTGCTGATCACCAAGTG+CGG | 0.680550 | 2_2:+1575839 | Msa0229740:CDS |
| GGCGGATCCAGTGTGAAACA+TGG | 0.683700 | 2_2:+1576004 | Msa0229740:three_prime_UTR |
| CGCCGGCGAAGAGAGAAATG+CGG | 0.696234 | 2_2:+1569013 | Msa0229740:CDS |
| ATCCAGTGTGAAACATGGTG+TGG | 0.712406 | 2_2:+1576009 | Msa0229740:three_prime_UTR |
| TCATTGGAGATATATACCAG+GGG | 0.719859 | 2_2:+1574466 | Msa0229740:CDS |
| TGTTCTTGGAGATTACAAGG+AGG | 0.739840 | 2_2:+1573384 | Msa0229740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATCAATTATATTTTAG+AGG | + | chr2_2:1570248-1570267 | Msa0229740:intron | 10.0% |
| !! | ATAAAAAATAAATATCAGAA+AGG | - | chr2_2:1573774-1573793 | None:intergenic | 10.0% |
| !!! | ATTTAAAATAGAGATTTATA+CGG | - | chr2_2:1573965-1573984 | None:intergenic | 10.0% |
| !! | AAAGAACTAAATTTAATTAA+GGG | - | chr2_2:1575673-1575692 | None:intergenic | 10.0% |
| !! | GTATGATTAAAAAAAAATAC+CGG | + | chr2_2:1569585-1569604 | Msa0229740:intron | 15.0% |
| !!! | TAGTTTTCAATCATAATTTA+AGG | + | chr2_2:1570367-1570386 | Msa0229740:intron | 15.0% |
| !! | TAATTGAATGCATATATTAA+TGG | + | chr2_2:1570413-1570432 | Msa0229740:intron | 15.0% |
| !! | AATTGAATGCATATATTAAT+GGG | + | chr2_2:1570414-1570433 | Msa0229740:intron | 15.0% |
| !! | AAATACTTGTATTAATTGAT+TGG | + | chr2_2:1570438-1570457 | Msa0229740:intron | 15.0% |
| !! | AATACTTGTATTAATTGATT+GGG | + | chr2_2:1570439-1570458 | Msa0229740:intron | 15.0% |
| !!! | ATAAAGATATTTTATGCATA+AGG | + | chr2_2:1571105-1571124 | Msa0229740:intron | 15.0% |
| !! | GAAGTAAAATTTACTAAAAA+AGG | - | chr2_2:1573157-1573176 | None:intergenic | 15.0% |
| !! | AATAAAAACTAAAACCAAAA+TGG | + | chr2_2:1573457-1573476 | Msa0229740:CDS | 15.0% |
| !! | ATAAAAACTAAAACCAAAAT+GGG | + | chr2_2:1573458-1573477 | Msa0229740:CDS | 15.0% |
| !! | AAATAAAAAATGAAAAAGTG+AGG | - | chr2_2:1574275-1574294 | None:intergenic | 15.0% |
| !!! | TCCAAAAAAAATATTTTACA+GGG | - | chr2_2:1575599-1575618 | None:intergenic | 15.0% |
| !!! | ATCCAAAAAAAATATTTTAC+AGG | - | chr2_2:1575598-1575617 | None:intergenic | 15.0% |
| !! | CTTGTAATTTGAAAAAAATT+TGG | - | chr2_2:1575489-1575508 | None:intergenic | 15.0% |
| !!! | AATTTTTTTCAAATTACAAG+AGG | + | chr2_2:1575489-1575508 | Msa0229740:intron | 15.0% |
| !!! | ATTTTTTTCAAATTACAAGA+GGG | + | chr2_2:1575490-1575509 | Msa0229740:intron | 15.0% |
| !!! | CTTGAAATTTGAAAATATTT+TGG | - | chr2_2:1575572-1575591 | None:intergenic | 15.0% |
| !!! | CAAAATATTTTCAAATTTCA+AGG | + | chr2_2:1575570-1575589 | Msa0229740:intron | 15.0% |
| !!! | ATCCAAAAAAAATATTTTAC+AGG | + | chr2_2:1575598-1575617 | Msa0229740:intron | 15.0% |
| !!! | TCCAAAAAAAATATTTTACA+GGG | + | chr2_2:1575599-1575618 | Msa0229740:intron | 15.0% |
| !! | CAAAGAACTAAATTTAATTA+AGG | - | chr2_2:1575674-1575693 | None:intergenic | 15.0% |
| !! | AAAGTTAAATATTAAGGCAA+TGG | + | chr2_2:1569498-1569517 | Msa0229740:intron | 20.0% |
| !!! | ATTAAAAAAAAATACCGGTT+TGG | + | chr2_2:1569590-1569609 | Msa0229740:intron | 20.0% |
| !!! | TTTTTTCAATTAAGATTGCA+CGG | - | chr2_2:1569725-1569744 | None:intergenic | 20.0% |
| !! | ATACTTGTATTAATTGATTG+GGG | + | chr2_2:1570440-1570459 | Msa0229740:intron | 20.0% |
| !! | ATGAACTTCAATAATATGAT+TGG | - | chr2_2:1570485-1570504 | None:intergenic | 20.0% |
| !!! | TATTTTCTGCATAAAGTTTA+AGG | + | chr2_2:1570543-1570562 | Msa0229740:intron | 20.0% |
| !!! | AATATTGAAGTTAAGTATTG+TGG | + | chr2_2:1570880-1570899 | Msa0229740:intron | 20.0% |
| !! | TAAGTAGATACGTATATTAA+TGG | + | chr2_2:1571072-1571091 | Msa0229740:intron | 20.0% |
| !! | AAGTAGATACGTATATTAAT+GGG | + | chr2_2:1571073-1571092 | Msa0229740:intron | 20.0% |
| !! | GCATAAAGTTCAAAATTAAT+TGG | + | chr2_2:1571120-1571139 | Msa0229740:intron | 20.0% |
| !!! | AAAACACTTTTATTGCTAAA+TGG | + | chr2_2:1571207-1571226 | Msa0229740:intron | 20.0% |
| !!! | CTAGTTTTTTAATATGGTAA+TGG | - | chr2_2:1572486-1572505 | None:intergenic | 20.0% |
| !! | TGAATTATTGAGATTACAAT+AGG | + | chr2_2:1572556-1572575 | Msa0229740:intron | 20.0% |
| !! | TATGTAAATGCCTATATTAA+TGG | + | chr2_2:1572784-1572803 | Msa0229740:intron | 20.0% |
| !! | ATGTAAATGCCTATATTAAT+GGG | + | chr2_2:1572785-1572804 | Msa0229740:intron | 20.0% |
| !! | TAAGTAAATGCATGTATTAA+TGG | + | chr2_2:1572969-1572988 | Msa0229740:intron | 20.0% |
| !! | AAGTAAATGCATGTATTAAT+GGG | + | chr2_2:1572970-1572989 | Msa0229740:intron | 20.0% |
| !!! | GAAATTGTGAATGTTTTTAT+AGG | + | chr2_2:1573196-1573215 | Msa0229740:intron | 20.0% |
| !!! | TTTTAGTTTTTATTCCTTTG+TGG | - | chr2_2:1573451-1573470 | None:intergenic | 20.0% |
| !! | TTTCTCAACATACAAAATAA+CGG | - | chr2_2:1573554-1573573 | None:intergenic | 20.0% |
| !! | AAAATTCTATGTAATAGTAG+AGG | + | chr2_2:1573697-1573716 | Msa0229740:intron | 20.0% |
| !! | TAAAATTTGATTCAACTCAT+TGG | + | chr2_2:1573727-1573746 | Msa0229740:intron | 20.0% |
| !! | AAAATTTGATTCAACTCATT+GGG | + | chr2_2:1573728-1573747 | Msa0229740:intron | 20.0% |
| !! | TATTTATTTACTATACCTGT+AGG | + | chr2_2:1573891-1573910 | Msa0229740:intron | 20.0% |
| !!! | AGTTGATGAATATGATAAAT+GGG | - | chr2_2:1574171-1574190 | None:intergenic | 20.0% |
| !!! | AAGTTGATGAATATGATAAA+TGG | - | chr2_2:1574172-1574191 | None:intergenic | 20.0% |
| !! | TTTATCATATTCATCAACTT+TGG | + | chr2_2:1574172-1574191 | Msa0229740:intron | 20.0% |
| !! | CCTTGTTAAAATAATAACTT+AGG | - | chr2_2:1574699-1574718 | None:intergenic | 20.0% |
| !!! | CCTAAGTTATTATTTTAACA+AGG | + | chr2_2:1574696-1574715 | Msa0229740:intron | 20.0% |
| !!! | AATAATTTTGTAAGTGTTGT+GGG | - | chr2_2:1574762-1574781 | None:intergenic | 20.0% |
| !!! | TAATAATTTTGTAAGTGTTG+TGG | - | chr2_2:1574763-1574782 | None:intergenic | 20.0% |
| !! | CAACACTTACAAAATTATTA+TGG | + | chr2_2:1574763-1574782 | Msa0229740:intron | 20.0% |
| !!! | AAAAATATCAAAGCATCAAT+AGG | + | chr2_2:1574908-1574927 | Msa0229740:CDS | 20.0% |
| !!! | AATACAAATAACGTTTCTTT+TGG | - | chr2_2:1575079-1575098 | None:intergenic | 20.0% |
| !! | ACATTTATCAATCTTATACT+TGG | + | chr2_2:1575110-1575129 | Msa0229740:intron | 20.0% |
| !! | ATTAAAACTACAAAGTTATC+TGG | - | chr2_2:1575203-1575222 | None:intergenic | 20.0% |
| !!! | CAAAAAAAATATTTTACAGG+GGG | - | chr2_2:1575601-1575620 | None:intergenic | 20.0% |
| !!! | CCAAAAAAAATATTTTACAG+GGG | - | chr2_2:1575600-1575619 | None:intergenic | 20.0% |
| !!! | AATTTGAAGATTTTTGGTTT+TGG | + | chr2_2:1575381-1575400 | Msa0229740:intron | 20.0% |
| !!! | TTTTTTTCAAATTACAAGAG+GGG | + | chr2_2:1575491-1575510 | Msa0229740:intron | 20.0% |
| !!! | CCAAAAAAAATATTTTACAG+GGG | + | chr2_2:1575600-1575619 | Msa0229740:intron | 20.0% |
| !!! | CAAAAAAAATATTTTACAGG+GGG | + | chr2_2:1575601-1575620 | Msa0229740:intron | 20.0% |
| !!! | AAAAAAAATATTTTACAGGG+GGG | + | chr2_2:1575602-1575621 | Msa0229740:intron | 20.0% |
| !!! | ATTTTGATTTTGTTCAGGAA+CGG | - | chr2_2:1569043-1569062 | None:intergenic | 25.0% |
| !!! | ACGTAATTTTGATTTTGTTC+AGG | - | chr2_2:1569048-1569067 | None:intergenic | 25.0% |
| ! | ACAAAATCAAAATTACGTCA+CGG | + | chr2_2:1569050-1569069 | Msa0229740:CDS | 25.0% |
| ! | GAAATGCTAAAAACTCAAAA+CGG | - | chr2_2:1569412-1569431 | None:intergenic | 25.0% |
| ! | AAAAATATGGGATAGTTGAT+TGG | - | chr2_2:1569896-1569915 | None:intergenic | 25.0% |
| ! | CTCTGTTTGGTAAAAAATAT+GGG | - | chr2_2:1569908-1569927 | None:intergenic | 25.0% |
| !!! | GTCAATTCTAGAATCAATTT+CGG | + | chr2_2:1570287-1570306 | Msa0229740:intron | 25.0% |
| ! | TACTTGTATTAATTGATTGG+GGG | + | chr2_2:1570441-1570460 | Msa0229740:intron | 25.0% |
| !!! | CATCTAAATTTTCTAAAGCT+AGG | - | chr2_2:1570574-1570593 | None:intergenic | 25.0% |
| !!! | TTAAAGTTTTAGCTATGAGT+TGG | + | chr2_2:1570660-1570679 | Msa0229740:intron | 25.0% |
| !!! | TACTTTTTCACATTCATTTC+TGG | + | chr2_2:1570949-1570968 | Msa0229740:intron | 25.0% |
| ! | CAAGTATTTACACAAAACTA+TGG | - | chr2_2:1571034-1571053 | None:intergenic | 25.0% |
| !! | GTTTAAGATTAAGATGAAGT+TGG | + | chr2_2:1571145-1571164 | Msa0229740:intron | 25.0% |
| !! | AGTAACAATTCTAATTTTCC+TGG | - | chr2_2:1571444-1571463 | None:intergenic | 25.0% |
| !!! | TCATTTTTACGCTTTTCTAA+TGG | - | chr2_2:1571642-1571661 | None:intergenic | 25.0% |
| ! | AATAGAATTCCAACTTCTAT+GGG | + | chr2_2:1571789-1571808 | Msa0229740:intron | 25.0% |
| ! | TCTACTATCTCATTAATTAG+TGG | - | chr2_2:1571831-1571850 | None:intergenic | 25.0% |
| !! | TTCTACTAAATTTGAAGCAT+GGG | - | chr2_2:1572200-1572219 | None:intergenic | 25.0% |
| !! | TTTCTACTAAATTTGAAGCA+TGG | - | chr2_2:1572201-1572220 | None:intergenic | 25.0% |
| ! | TTACCAAATAATGATGAAGT+TGG | + | chr2_2:1572275-1572294 | Msa0229740:intron | 25.0% |
| ! | ACCATATTAAAAAACTAGCT+AGG | + | chr2_2:1572488-1572507 | Msa0229740:intron | 25.0% |
| ! | CCATATTAAAAAACTAGCTA+GGG | + | chr2_2:1572489-1572508 | Msa0229740:intron | 25.0% |
| ! | CATATTAAAAAACTAGCTAG+GGG | + | chr2_2:1572490-1572509 | Msa0229740:intron | 25.0% |
| ! | ATGTATCTACCCATTAATAT+AGG | - | chr2_2:1572797-1572816 | None:intergenic | 25.0% |
| ! | GGCAATACAAACATTTAATT+TGG | - | chr2_2:1572882-1572901 | None:intergenic | 25.0% |
| ! | ATGCATACAATATCTTTACA+TGG | - | chr2_2:1573001-1573020 | None:intergenic | 25.0% |
| !!! | ATTGTGAATGTTTTTATAGG+TGG | + | chr2_2:1573199-1573218 | Msa0229740:intron | 25.0% |
| !!! | ATTTTTCGAAAGAATGCAAA+AGG | + | chr2_2:1573481-1573500 | Msa0229740:CDS | 25.0% |
| !!! | AAAATAACGGAAAGTACTTT+GGG | - | chr2_2:1573541-1573560 | None:intergenic | 25.0% |
| !!! | AATTTTAGAAACAAACCTTC+AGG | - | chr2_2:1573683-1573702 | None:intergenic | 25.0% |
| ! | TAGAGAAAAATTGATAAGTC+AGG | - | chr2_2:1574088-1574107 | None:intergenic | 25.0% |
| ! | AAAATGAAAAAGTGAGGAAA+AGG | - | chr2_2:1574269-1574288 | None:intergenic | 25.0% |
| !! | CATTTTTCCAAGTTTATCAT+TGG | + | chr2_2:1574450-1574469 | Msa0229740:CDS | 25.0% |
| ! | TATATCTCCAATGATAAACT+TGG | - | chr2_2:1574460-1574479 | None:intergenic | 25.0% |
| ! | GAAGATGTTATGATGTAATT+TGG | - | chr2_2:1574550-1574569 | None:intergenic | 25.0% |
| !!! | ATTTTGATGAATAGCTTACT+TGG | + | chr2_2:1574624-1574643 | Msa0229740:intron | 25.0% |
| !! | TTTTGATGAATAGCTTACTT+GGG | + | chr2_2:1574625-1574644 | Msa0229740:intron | 25.0% |
| !! | GAGGAAATAAATTTGTTTGA+AGG | - | chr2_2:1574961-1574980 | None:intergenic | 25.0% |
| ! | TCCTCCAAAGAATAATTTAA+CGG | + | chr2_2:1574987-1575006 | Msa0229740:intron | 25.0% |
| !!! | CCCCTGTAAAATATTTTTTT+TGG | + | chr2_2:1575345-1575364 | Msa0229740:intron | 25.0% |
| ! | ACAGTACAAAATCAAAGATA+TGG | + | chr2_2:1575420-1575439 | Msa0229740:intron | 25.0% |
| !! | CTAAATTTGCTCAAATTACA+GGG | + | chr2_2:1575519-1575538 | Msa0229740:intron | 25.0% |
| !! | TAAATTTGCTCAAATTACAG+GGG | + | chr2_2:1575520-1575539 | Msa0229740:intron | 25.0% |
| !!! | CCCCTGTAAAATATTTTTTT+TGG | - | chr2_2:1575345-1575364 | None:intergenic | 25.0% |
| !! | TATTCATGAAATCTGAAACT+AGG | + | chr2_2:1575894-1575913 | Msa0229740:exon | 25.0% |
| GAAGATATTGTCTTCTTCAT+CGG | - | chr2_2:1569166-1569185 | None:intergenic | 30.0% | |
| !!! | ACCTTCTTTTTTCGAATCAT+TGG | + | chr2_2:1569188-1569207 | Msa0229740:CDS | 30.0% |
| TCCAATGATTCGAAAAAAGA+AGG | - | chr2_2:1569192-1569211 | None:intergenic | 30.0% | |
| TTCATAATCCTGAACTTGAA+CGG | - | chr2_2:1569253-1569272 | None:intergenic | 30.0% | |
| AAGTTCAGGATTATGAATGT+CGG | + | chr2_2:1569256-1569275 | Msa0229740:CDS | 30.0% | |
| AAAAAAGCAGTAACAACAGA+AGG | - | chr2_2:1569383-1569402 | None:intergenic | 30.0% | |
| ATATTAAGGCAATGGTATGT+TGG | + | chr2_2:1569506-1569525 | Msa0229740:intron | 30.0% | |
| AAAAATGACAGATACCAAAC+CGG | - | chr2_2:1569607-1569626 | None:intergenic | 30.0% | |
| CCAAACACTACAAATTCAAT+CGG | + | chr2_2:1569814-1569833 | Msa0229740:intron | 30.0% | |
| GCTCTGTTTGGTAAAAAATA+TGG | - | chr2_2:1569909-1569928 | None:intergenic | 30.0% | |
| !! | TTCGAGATTGATTGATTTTG+TGG | + | chr2_2:1569991-1570010 | Msa0229740:intron | 30.0% |
| !! | AGATTGATTGATTTTGTGGA+TGG | + | chr2_2:1569995-1570014 | Msa0229740:intron | 30.0% |
| !! | TCTGACTAAAATTGAGTTGA+AGG | + | chr2_2:1570121-1570140 | Msa0229740:intron | 30.0% |
| AGAATTGACTATGACATGTT+TGG | - | chr2_2:1570276-1570295 | None:intergenic | 30.0% | |
| ACATGACTGTATCAATTGAT+TGG | + | chr2_2:1570330-1570349 | Msa0229740:intron | 30.0% | |
| CATGACTGTATCAATTGATT+GGG | + | chr2_2:1570331-1570350 | Msa0229740:intron | 30.0% | |
| ATGACTGTATCAATTGATTG+GGG | + | chr2_2:1570332-1570351 | Msa0229740:intron | 30.0% | |
| ACTTGTATTAATTGATTGGG+GGG | + | chr2_2:1570442-1570461 | Msa0229740:intron | 30.0% | |
| ATTCATGTATGTAGCATGAA+TGG | + | chr2_2:1570503-1570522 | Msa0229740:intron | 30.0% | |
| TTCATGTATGTAGCATGAAT+GGG | + | chr2_2:1570504-1570523 | Msa0229740:intron | 30.0% | |
| TGAATTCCATATTAGAGCTT+TGG | + | chr2_2:1570592-1570611 | Msa0229740:intron | 30.0% | |
| CTTTAATTCATGTTGCTAGA+CGG | - | chr2_2:1570646-1570665 | None:intergenic | 30.0% | |
| ACATAGCGAATAACTCAAAA+TGG | - | chr2_2:1570796-1570815 | None:intergenic | 30.0% | |
| ! | ACTTTAGACCGTTCAATTTT+TGG | + | chr2_2:1570907-1570926 | Msa0229740:intron | 30.0% |
| ! | CTTTAGACCGTTCAATTTTT+GGG | + | chr2_2:1570908-1570927 | Msa0229740:intron | 30.0% |
| ! | TTTAGACCGTTCAATTTTTG+GGG | + | chr2_2:1570909-1570928 | Msa0229740:intron | 30.0% |
| TGATTGTGTGTGATTTGAAT+TGG | + | chr2_2:1570979-1570998 | Msa0229740:intron | 30.0% | |
| ACCATTAACCATAGAATTAG+TGG | + | chr2_2:1571411-1571430 | Msa0229740:intron | 30.0% | |
| TCCACTAATTCTATGGTTAA+TGG | - | chr2_2:1571415-1571434 | None:intergenic | 30.0% | |
| AACCATAGAATTAGTGGAAT+TGG | + | chr2_2:1571417-1571436 | Msa0229740:intron | 30.0% | |
| ! | TAGAATTGTTACTCTTTTGC+TGG | + | chr2_2:1571451-1571470 | Msa0229740:intron | 30.0% |
| CTGTTATCATAGATTCAAGA+AGG | - | chr2_2:1571505-1571524 | None:intergenic | 30.0% | |
| TATGATAACAGATAGAAGCA+TGG | + | chr2_2:1571514-1571533 | Msa0229740:intron | 30.0% | |
| CAATAGAATTCCAACTTCTA+TGG | + | chr2_2:1571788-1571807 | Msa0229740:intron | 30.0% | |
| ATAGTAGACTTGTAATCTTG+AGG | + | chr2_2:1571843-1571862 | Msa0229740:intron | 30.0% | |
| ! | ATTGATTCAATTCACGCAAT+TGG | - | chr2_2:1571917-1571936 | None:intergenic | 30.0% |
| TCCTATCATGTTCAATACTT+CGG | - | chr2_2:1572245-1572264 | None:intergenic | 30.0% | |
| TTGAACATGATAGGAATCAA+AGG | + | chr2_2:1572250-1572269 | Msa0229740:intron | 30.0% | |
| ACACCAACTTCATCATTATT+TGG | - | chr2_2:1572281-1572300 | None:intergenic | 30.0% | |
| ! | ATTGAGAGAACTATCTTTTC+TGG | - | chr2_2:1572333-1572352 | None:intergenic | 30.0% |
| !!! | CCCTAGCTAGTTTTTTAATA+TGG | - | chr2_2:1572492-1572511 | None:intergenic | 30.0% |
| TTTAGACCTTACATGTTTAC+TGG | + | chr2_2:1572593-1572612 | Msa0229740:intron | 30.0% | |
| CTATAACCAGTAAACATGTA+AGG | - | chr2_2:1572602-1572621 | None:intergenic | 30.0% | |
| TGATAAAGTTCATTCATGCA+TGG | + | chr2_2:1572752-1572771 | Msa0229740:intron | 30.0% | |
| !!! | CTTCTAGATTTTCTAAAGCT+AGG | - | chr2_2:1572855-1572874 | None:intergenic | 30.0% |
| ATGTTTGTATTGCCATTCTT+TGG | + | chr2_2:1572888-1572907 | Msa0229740:intron | 30.0% | |
| TGTTTGTATTGCCATTCTTT+GGG | + | chr2_2:1572889-1572908 | Msa0229740:intron | 30.0% | |
| !! | CTTCTAGGTTTTATAAAGCT+AGG | - | chr2_2:1573040-1573059 | None:intergenic | 30.0% |
| ! | AGCAATCTAAAGCCTTAATA+CGG | - | chr2_2:1573067-1573086 | None:intergenic | 30.0% |
| !!! | AATTGAAGTTTTAGCTGAGT+TGG | + | chr2_2:1573130-1573149 | Msa0229740:intron | 30.0% |
| AATGCAAATGTCACCAATTT+CGG | - | chr2_2:1573327-1573346 | None:intergenic | 30.0% | |
| ! | TCTTTCGAAAAATCCCATTT+TGG | - | chr2_2:1573474-1573493 | None:intergenic | 30.0% |
| !! | CAAAATAACGGAAAGTACTT+TGG | - | chr2_2:1573542-1573561 | None:intergenic | 30.0% |
| ATATCTTATATTCCTCTCCA+GGG | + | chr2_2:1573617-1573636 | Msa0229740:intron | 30.0% | |
| !! | ATATGTGATTTTGACAACCA+TGG | - | chr2_2:1573845-1573864 | None:intergenic | 30.0% |
| ATAGATACAATTCCTCTAGT+AGG | + | chr2_2:1574000-1574019 | Msa0229740:intron | 30.0% | |
| AATGTGTGTATGATTCTGAT+AGG | + | chr2_2:1574349-1574368 | Msa0229740:CDS | 30.0% | |
| ATGTGTGTATGATTCTGATA+GGG | + | chr2_2:1574350-1574369 | Msa0229740:CDS | 30.0% | |
| TATCATTGGAGATATATACC+AGG | + | chr2_2:1574464-1574483 | Msa0229740:CDS | 30.0% | |
| ATCATTGGAGATATATACCA+GGG | + | chr2_2:1574465-1574484 | Msa0229740:CDS | 30.0% | |
| ! | TCAAAAAGTCACAAAGCTTT+TGG | - | chr2_2:1574522-1574541 | None:intergenic | 30.0% |
| TACATCATAACATCTTCAAC+TGG | + | chr2_2:1574553-1574572 | Msa0229740:CDS | 30.0% | |
| TAACACAGACATCAATGTTT+AGG | - | chr2_2:1574601-1574620 | None:intergenic | 30.0% | |
| !!! | ATTATTTTAACAAGGCTTCC+AGG | + | chr2_2:1574704-1574723 | Msa0229740:intron | 30.0% |
| GTGGTAATTGAAAAACAAGT+AGG | + | chr2_2:1574881-1574900 | Msa0229740:CDS | 30.0% | |
| ! | ATTATTCTTTGGAGGAAAAG+AGG | - | chr2_2:1574983-1575002 | None:intergenic | 30.0% |
| TGAGCCGTTAAATTATTCTT+TGG | - | chr2_2:1574994-1575013 | None:intergenic | 30.0% | |
| AATAAGACTTTCAGAACCAA+TGG | - | chr2_2:1575172-1575191 | None:intergenic | 30.0% | |
| AGTGTCTAATTAAGTGAACT+TGG | - | chr2_2:1575237-1575256 | None:intergenic | 30.0% | |
| AGTTCACTTAATTAGACACT+AGG | + | chr2_2:1575237-1575256 | Msa0229740:intron | 30.0% | |
| ! | TTTGGTGCGACATTAATTAA+AGG | + | chr2_2:1575275-1575294 | Msa0229740:intron | 30.0% |
| TTGGTGCGACATTAATTAAA+GGG | + | chr2_2:1575276-1575295 | Msa0229740:intron | 30.0% | |
| CCAAAAATCTTCAAATTACG+AGG | - | chr2_2:1575378-1575397 | None:intergenic | 30.0% | |
| ! | CCTCGTAATTTGAAGATTTT+TGG | + | chr2_2:1575375-1575394 | Msa0229740:intron | 30.0% |
| TACAAAATCAAAGATATGGC+AGG | + | chr2_2:1575424-1575443 | Msa0229740:intron | 30.0% | |
| ACAAAATCAAAGATATGGCA+GGG | + | chr2_2:1575425-1575444 | Msa0229740:intron | 30.0% | |
| CTGTTCATTTGAGCAAATTT+CGG | - | chr2_2:1575457-1575476 | None:intergenic | 30.0% | |
| ! | GAAATTTGCTCAAATGAACA+GGG | + | chr2_2:1575456-1575475 | Msa0229740:intron | 30.0% |
| ! | AAATTTGCTCAAATGAACAG+GGG | + | chr2_2:1575457-1575476 | Msa0229740:intron | 30.0% |
| CCTGTAATTTGAGCAAATTT+AGG | - | chr2_2:1575521-1575540 | None:intergenic | 30.0% | |
| ! | CCTAAATTTGCTCAAATTAC+AGG | + | chr2_2:1575518-1575537 | Msa0229740:intron | 30.0% |
| ! | AAATTTGCTCAAATTACAGG+GGG | + | chr2_2:1575521-1575540 | Msa0229740:intron | 30.0% |
| AATTTGAAGGTTGTACATTC+AGG | + | chr2_2:1575769-1575788 | Msa0229740:CDS | 30.0% | |
| ! | GTATATAATTTTGTGGGCAT+GGG | + | chr2_2:1575983-1576002 | Msa0229740:three_prime_UTR | 30.0% |
| AAATGGGAAATAATCTGGTA+CGG | - | chr2_2:1576041-1576060 | None:intergenic | 30.0% | |
| GAATTTCGAAACTACGAAGA+CGG | + | chr2_2:1569072-1569091 | Msa0229740:CDS | 35.0% | |
| AAAAGGAAACACTTCGAGTA+AGG | + | chr2_2:1569127-1569146 | Msa0229740:CDS | 35.0% | |
| CCGATTGAATTTGTAGTGTT+TGG | - | chr2_2:1569817-1569836 | None:intergenic | 35.0% | |
| ATTTCATGTACGTGCATGTT+TGG | + | chr2_2:1570047-1570066 | Msa0229740:intron | 35.0% | |
| !! | AAGCTACAATTTCTAGCTTC+AGG | + | chr2_2:1570225-1570244 | Msa0229740:intron | 35.0% |
| !! | TTCTAGAATCAATTTCGGCT+TGG | + | chr2_2:1570292-1570311 | Msa0229740:intron | 35.0% |
| TGACTGTATCAATTGATTGG+GGG | + | chr2_2:1570333-1570352 | Msa0229740:intron | 35.0% | |
| AATTGATTGGGGGATTTGAA+GGG | + | chr2_2:1570343-1570362 | Msa0229740:intron | 35.0% | |
| ! | AATTTAAGGTCATCCATGCA+TGG | + | chr2_2:1570381-1570400 | Msa0229740:intron | 35.0% |
| !! | ATTACAAAAGCATCCATGCA+TGG | - | chr2_2:1570397-1570416 | None:intergenic | 35.0% |
| TCACTTCCCCAAAAATTGAA+CGG | - | chr2_2:1570918-1570937 | None:intergenic | 35.0% | |
| !! | TCTCTCTCTGTTTTTCTACT+TGG | - | chr2_2:1571296-1571315 | None:intergenic | 35.0% |
| ! | CATAATCCTTCGAGTTACTT+TGG | - | chr2_2:1571334-1571353 | None:intergenic | 35.0% |
| GTCCAATTCCACTAATTCTA+TGG | - | chr2_2:1571422-1571441 | None:intergenic | 35.0% | |
| ! | TGATTGTTGCTCTAAGTTAG+AGG | + | chr2_2:1571659-1571678 | Msa0229740:intron | 35.0% |
| ! | GAAGCAGTGAAATTGATAGT+AGG | + | chr2_2:1571720-1571739 | Msa0229740:intron | 35.0% |
| AATTCCAACTTCTATGGGAA+TGG | + | chr2_2:1571794-1571813 | Msa0229740:intron | 35.0% | |
| TCATTAATTAGTGGCAGGAT+TGG | - | chr2_2:1571822-1571841 | None:intergenic | 35.0% | |
| CTATCTCATTAATTAGTGGC+AGG | - | chr2_2:1571827-1571846 | None:intergenic | 35.0% | |
| !! | ACCGAAGTATTGAACATGAT+AGG | + | chr2_2:1572241-1572260 | Msa0229740:intron | 35.0% |
| GATTGCAGAGAATGAATTTG+TGG | + | chr2_2:1572366-1572385 | Msa0229740:intron | 35.0% | |
| ATTAAAAAACTAGCTAGGGG+TGG | + | chr2_2:1572493-1572512 | Msa0229740:intron | 35.0% | |
| TGAGATTACAATAGGTGCAA+TGG | + | chr2_2:1572564-1572583 | Msa0229740:intron | 35.0% | |
| TCACTGAAACGTAGTTACTA+GGG | + | chr2_2:1572639-1572658 | Msa0229740:intron | 35.0% | |
| GCATGAATGAACTTTATCAG+AGG | - | chr2_2:1572751-1572770 | None:intergenic | 35.0% | |
| CTTTGTTCTTGGAGATTACA+AGG | + | chr2_2:1573381-1573400 | Msa0229740:CDS | 35.0% | |
| AGAATGCAAAAGGTAAGTAG+TGG | + | chr2_2:1573491-1573510 | Msa0229740:intron | 35.0% | |
| GAATGCAAAAGGTAAGTAGT+GGG | + | chr2_2:1573492-1573511 | Msa0229740:intron | 35.0% | |
| GATATCTTATATTCCTCTCC+AGG | + | chr2_2:1573616-1573635 | Msa0229740:intron | 35.0% | |
| ! | TAGGTTGAACTTGCGAATAT+GGG | + | chr2_2:1574060-1574079 | Msa0229740:intron | 35.0% |
| AAGCATGGAAGATAAAGAGT+TGG | + | chr2_2:1574315-1574334 | Msa0229740:CDS | 35.0% | |
| TCATTGGAGATATATACCAG+GGG | + | chr2_2:1574466-1574485 | Msa0229740:CDS | 35.0% | |
| TTGTTCAGTGTGCAACATAA+TGG | - | chr2_2:1574494-1574513 | None:intergenic | 35.0% | |
| !! | ACTATTGATTCATCCGTGAA+AGG | + | chr2_2:1574654-1574673 | Msa0229740:intron | 35.0% |
| !! | ATAACTTAGGTTGACGAATC+AGG | - | chr2_2:1574686-1574705 | None:intergenic | 35.0% |
| AAATTACTGCCAAAACAACC+TGG | - | chr2_2:1574725-1574744 | None:intergenic | 35.0% | |
| TATTATGGATCTGCAAGTCT+AGG | + | chr2_2:1574778-1574797 | Msa0229740:intron | 35.0% | |
| !! | TGTTTTTCAATTACCACCCA+TGG | - | chr2_2:1574878-1574897 | None:intergenic | 35.0% |
| AACACTGTTTCCTAAATCTG+AGG | + | chr2_2:1574931-1574950 | Msa0229740:CDS | 35.0% | |
| GCCGTTAAATTATTCTTTGG+AGG | - | chr2_2:1574991-1575010 | None:intergenic | 35.0% | |
| GTCTAATTAAGTGAACTTGG+TGG | - | chr2_2:1575234-1575253 | None:intergenic | 35.0% | |
| ACTTAATTAGACACTAGGCA+CGG | + | chr2_2:1575242-1575261 | Msa0229740:intron | 35.0% | |
| ! | TATTTTACAGGGGGTAAAAC+CGG | - | chr2_2:1575338-1575357 | None:intergenic | 35.0% |
| TGTACTGTCAAAACTCATGA+AGG | - | chr2_2:1575408-1575427 | None:intergenic | 35.0% | |
| CAAAATCAAAGATATGGCAG+GGG | + | chr2_2:1575426-1575445 | Msa0229740:intron | 35.0% | |
| AAAATCAAAGATATGGCAGG+GGG | + | chr2_2:1575427-1575446 | Msa0229740:intron | 35.0% | |
| ! | CGAAATTTGCTCAAATGAAC+AGG | + | chr2_2:1575455-1575474 | Msa0229740:intron | 35.0% |
| ! | AATTTGCTCAAATGAACAGG+GGG | + | chr2_2:1575458-1575477 | Msa0229740:intron | 35.0% |
| CCTGTAATATAGGTCATTTC+CGG | - | chr2_2:1575632-1575651 | None:intergenic | 35.0% | |
| CGGAAATGACCTATATTACA+GGG | + | chr2_2:1575630-1575649 | Msa0229740:intron | 35.0% | |
| GGAAATGACCTATATTACAG+GGG | + | chr2_2:1575631-1575650 | Msa0229740:intron | 35.0% | |
| GAAATGACCTATATTACAGG+GGG | + | chr2_2:1575632-1575651 | Msa0229740:intron | 35.0% | |
| AAATGACCTATATTACAGGG+GGG | + | chr2_2:1575633-1575652 | Msa0229740:intron | 35.0% | |
| TAGAAGGAGTAGCAATTTGA+AGG | + | chr2_2:1575756-1575775 | Msa0229740:CDS | 35.0% | |
| AAACAAATCCCTCTTAGCAT+TGG | - | chr2_2:1575815-1575834 | None:intergenic | 35.0% | |
| !! | TGCTAAGAGGGATTTGTTTT+CGG | + | chr2_2:1575816-1575835 | Msa0229740:CDS | 35.0% |
| ! | TTGTCCTCTATACTCGTTTT+TGG | + | chr2_2:1575952-1575971 | Msa0229740:three_prime_UTR | 35.0% |
| ACAACCAAAAACGAGTATAG+AGG | - | chr2_2:1575959-1575978 | None:intergenic | 35.0% | |
| !!! | TCTATACTCGTTTTTGGTTG+TGG | + | chr2_2:1575958-1575977 | Msa0229740:three_prime_UTR | 35.0% |
| !!! | CTATACTCGTTTTTGGTTGT+GGG | + | chr2_2:1575959-1575978 | Msa0229740:three_prime_UTR | 35.0% |
| ! | TGTGGGCGTATATAATTTTG+TGG | + | chr2_2:1575976-1575995 | Msa0229740:three_prime_UTR | 35.0% |
| ! | GTGGGCGTATATAATTTTGT+GGG | + | chr2_2:1575977-1575996 | Msa0229740:three_prime_UTR | 35.0% |
| ! | CGTATATAATTTTGTGGGCA+TGG | + | chr2_2:1575982-1576001 | Msa0229740:three_prime_UTR | 35.0% |
| ! | TACACTACACCGAGTTGAAA+TGG | + | chr2_2:1568927-1568946 | Msa0229740:exon | 40.0% |
| ! | GTTTCTCTGCCATTTCAACT+CGG | - | chr2_2:1568939-1568958 | None:intergenic | 40.0% |
| !!! | ACGGTGTCGTTTTGTTTCAA+CGG | - | chr2_2:1568973-1568992 | None:intergenic | 40.0% |
| CGGAGTTTCGAAGAATGAAA+CGG | - | chr2_2:1568992-1569011 | None:intergenic | 40.0% | |
| TTCCTCCAACGTAACCATAA+CGG | - | chr2_2:1569109-1569128 | None:intergenic | 40.0% | |
| TATGGTTACGTTGGAGGAAA+AGG | + | chr2_2:1569110-1569129 | Msa0229740:CDS | 40.0% | |
| !! | TGAATGTCGGAAGCTTGTTA+AGG | + | chr2_2:1569269-1569288 | Msa0229740:CDS | 40.0% |
| !! | GAATGTCGGAAGCTTGTTAA+GGG | + | chr2_2:1569270-1569289 | Msa0229740:CDS | 40.0% |
| !! | GAAGCTTGTTAAGGGTGTTA+GGG | + | chr2_2:1569278-1569297 | Msa0229740:CDS | 40.0% |
| TCATAGAAGCGAAGATCATC+AGG | - | chr2_2:1569327-1569346 | None:intergenic | 40.0% | |
| CTATGATGCTGTTGTTGATG+CGG | + | chr2_2:1569341-1569360 | Msa0229740:CDS | 40.0% | |
| AGATTGCACGGATAAAACTG+AGG | - | chr2_2:1569713-1569732 | None:intergenic | 40.0% | |
| ATCTGCTATCAGCTATAAGC+TGG | + | chr2_2:1569844-1569863 | Msa0229740:intron | 40.0% | |
| TTACCAAACAGAGCCATAGT+TGG | + | chr2_2:1569915-1569934 | Msa0229740:intron | 40.0% | |
| ! | AATCCAACTATGGCTCTGTT+TGG | - | chr2_2:1569921-1569940 | None:intergenic | 40.0% |
| ! | ACAGAGCCATAGTTGGATTT+TGG | + | chr2_2:1569922-1569941 | Msa0229740:intron | 40.0% |
| ! | CAGAGCCATAGTTGGATTTT+GGG | + | chr2_2:1569923-1569942 | Msa0229740:intron | 40.0% |
| ! | AGAGCCATAGTTGGATTTTG+GGG | + | chr2_2:1569924-1569943 | Msa0229740:intron | 40.0% |
| TACGTGCATGTTTGGTTATG+TGG | + | chr2_2:1570055-1570074 | Msa0229740:intron | 40.0% | |
| TGCATGTTTGGTTATGTGGT+GGG | + | chr2_2:1570059-1570078 | Msa0229740:intron | 40.0% | |
| CAATTGATTGGGGGATTTGA+AGG | + | chr2_2:1570342-1570361 | Msa0229740:intron | 40.0% | |
| AATTGATTGGGGGGATTTGA+AGG | + | chr2_2:1570451-1570470 | Msa0229740:intron | 40.0% | |
| ATTGATTGGGGGGATTTGAA+GGG | + | chr2_2:1570452-1570471 | Msa0229740:intron | 40.0% | |
| TGTATGTAGCATGAATGGGT+AGG | + | chr2_2:1570508-1570527 | Msa0229740:intron | 40.0% | |
| ! | GGCAATCCAAAGCTCTAATA+TGG | - | chr2_2:1570601-1570620 | None:intergenic | 40.0% |
| ! | TTCTGCATTTCTTGCTGTCT+AGG | - | chr2_2:1571184-1571203 | None:intergenic | 40.0% |
| TTCTTCGACTATCAGCACTA+GGG | + | chr2_2:1571253-1571272 | Msa0229740:intron | 40.0% | |
| TCTACTTGGCATAACAGACT+AGG | - | chr2_2:1571282-1571301 | None:intergenic | 40.0% | |
| AACAGAGAGAGAATAAGCAG+TGG | + | chr2_2:1571304-1571323 | Msa0229740:intron | 40.0% | |
| GATTATGAGACCATGGTACA+GGG | + | chr2_2:1571347-1571366 | Msa0229740:intron | 40.0% | |
| AGAATTAGTGGAATTGGACC+AGG | + | chr2_2:1571423-1571442 | Msa0229740:intron | 40.0% | |
| GTCAAGTGTGCCATAAGTTT+GGG | - | chr2_2:1571542-1571561 | None:intergenic | 40.0% | |
| TGTCAAGTGTGCCATAAGTT+TGG | - | chr2_2:1571543-1571562 | None:intergenic | 40.0% | |
| ! | TTACGCTTTTCTAATGGCTC+AGG | - | chr2_2:1571636-1571655 | None:intergenic | 40.0% |
| ! | CCTTGAGCGTTTTTGCAAAA+TGG | - | chr2_2:1571751-1571770 | None:intergenic | 40.0% |
| ! | CCATTTTGCAAAAACGCTCA+AGG | + | chr2_2:1571748-1571767 | Msa0229740:intron | 40.0% |
| TGCGTGAATTGAATCAATCG+TGG | + | chr2_2:1571919-1571938 | Msa0229740:intron | 40.0% | |
| TGAGCTTCGCAATACGAAAA+TGG | - | chr2_2:1571984-1572003 | None:intergenic | 40.0% | |
| ! | GCTTTGCATTGATGTGTGTT+TGG | + | chr2_2:1572020-1572039 | Msa0229740:intron | 40.0% |
| CAAGAATTCTTGGCAACTAG+GGG | - | chr2_2:1572065-1572084 | None:intergenic | 40.0% | |
| CCAAGAATTCTTGGCAACTA+GGG | - | chr2_2:1572066-1572085 | None:intergenic | 40.0% | |
| TCCAAGAATTCTTGGCAACT+AGG | - | chr2_2:1572067-1572086 | None:intergenic | 40.0% | |
| ! | TGATCGGTTCCAAGAATTCT+TGG | - | chr2_2:1572075-1572094 | None:intergenic | 40.0% |
| ! | TTGTGGATTGTAACCAAGCT+AGG | + | chr2_2:1572119-1572138 | Msa0229740:intron | 40.0% |
| ! | TTGTGGATTGTAACCAAGCT+AGG | + | chr2_2:1572119-1572138 | Msa0229740:intron | 40.0% |
| AAGTTTAGTTGCTCCTAGCT+TGG | - | chr2_2:1572171-1572190 | None:intergenic | 40.0% | |
| ACAGGTAGAACCTGTGATTA+AGG | - | chr2_2:1572305-1572324 | None:intergenic | 40.0% | |
| TAATCACAGGTTCTACCTGT+CGG | + | chr2_2:1572305-1572324 | Msa0229740:intron | 40.0% | |
| GAATGAATTTGTGGCCAAGA+CGG | + | chr2_2:1572375-1572394 | Msa0229740:intron | 40.0% | |
| ! | TACTGGTTATAGCCAGTAAC+AGG | + | chr2_2:1572610-1572629 | Msa0229740:intron | 40.0% |
| ACTGGTTATAGCCAGTAACA+GGG | + | chr2_2:1572611-1572630 | Msa0229740:intron | 40.0% | |
| CTCACTGAAACGTAGTTACT+AGG | + | chr2_2:1572638-1572657 | Msa0229740:intron | 40.0% | |
| ACGTAGTTACTAGGGAGTTA+AGG | + | chr2_2:1572647-1572666 | Msa0229740:intron | 40.0% | |
| !! | ATTGCCATTCTTTGGGTTGA+AGG | + | chr2_2:1572896-1572915 | Msa0229740:intron | 40.0% |
| !! | TTGCCATTCTTTGGGTTGAA+GGG | + | chr2_2:1572897-1572916 | Msa0229740:intron | 40.0% |
| TAACCCTTCAACCCAAAGAA+TGG | - | chr2_2:1572903-1572922 | None:intergenic | 40.0% | |
| CCTTAATACGGAATGCTTCT+AGG | - | chr2_2:1573055-1573074 | None:intergenic | 40.0% | |
| !! | CCTAGAAGCATTCCGTATTA+AGG | + | chr2_2:1573052-1573071 | Msa0229740:intron | 40.0% |
| ATGTAACCAGGACAGGATAA+AGG | - | chr2_2:1573276-1573295 | None:intergenic | 40.0% | |
| TTTATCCTGTCCTGGTTACA+TGG | + | chr2_2:1573275-1573294 | Msa0229740:CDS | 40.0% | |
| TTATCCTGTCCTGGTTACAT+GGG | + | chr2_2:1573276-1573295 | Msa0229740:CDS | 40.0% | |
| GCAGTCAACTTTCCTTCATT+TGG | - | chr2_2:1573302-1573321 | None:intergenic | 40.0% | |
| TGTTCTTGGAGATTACAAGG+AGG | + | chr2_2:1573384-1573403 | Msa0229740:CDS | 40.0% | |
| AGGAGACTAGAATCACAATC+TGG | + | chr2_2:1573404-1573423 | Msa0229740:CDS | 40.0% | |
| ACTAGAATCACAATCTGGAC+AGG | + | chr2_2:1573409-1573428 | Msa0229740:CDS | 40.0% | |
| ATCACAATCTGGACAGGAAT+TGG | + | chr2_2:1573415-1573434 | Msa0229740:CDS | 40.0% | |
| AAACAAACCTTCAGGAGAAC+AGG | - | chr2_2:1573675-1573694 | None:intergenic | 40.0% | |
| ! | ATTTTCCTCGTGACTCTGTT+AGG | + | chr2_2:1573809-1573828 | Msa0229740:intron | 40.0% |
| TTTGACAACCATGGTTACCA+AGG | - | chr2_2:1573836-1573855 | None:intergenic | 40.0% | |
| AGAATCTGACATGATCCTAC+AGG | - | chr2_2:1573909-1573928 | None:intergenic | 40.0% | |
| AGGATCATGTCAGATTCTAC+TGG | + | chr2_2:1573911-1573930 | Msa0229740:intron | 40.0% | |
| GATACAATTCCTCTAGTAGG+TGG | + | chr2_2:1574003-1574022 | Msa0229740:intron | 40.0% | |
| TAGTAAGATCCACCTACTAG+AGG | - | chr2_2:1574015-1574034 | None:intergenic | 40.0% | |
| TGGATCTTACTATCCTTGAG+AGG | + | chr2_2:1574023-1574042 | Msa0229740:intron | 40.0% | |
| CATATTCGCAAGTTCAACCT+AGG | - | chr2_2:1574061-1574080 | None:intergenic | 40.0% | |
| ! | CTAGGTTGAACTTGCGAATA+TGG | + | chr2_2:1574059-1574078 | Msa0229740:intron | 40.0% |
| TATCTTCCATGCTTTCGTCA+GGG | - | chr2_2:1574309-1574328 | None:intergenic | 40.0% | |
| TTATCTTCCATGCTTTCGTC+AGG | - | chr2_2:1574310-1574329 | None:intergenic | 40.0% | |
| AAGAACTCTACAGCTGTTGA+TGG | - | chr2_2:1574397-1574416 | None:intergenic | 40.0% | |
| TCATAACATCTTCAACTGGC+AGG | + | chr2_2:1574557-1574576 | Msa0229740:CDS | 40.0% | |
| AATCAGGCATTCACCTTTCA+CGG | - | chr2_2:1574670-1574689 | None:intergenic | 40.0% | |
| CCTGAAAAAAGACAGTGAAG+AGG | - | chr2_2:1574855-1574874 | None:intergenic | 40.0% | |
| !!! | CCTCTTCACTGTCTTTTTTC+AGG | + | chr2_2:1574852-1574871 | Msa0229740:intron | 40.0% |
| !!! | ACTGTCTTTTTTCAGGCCAT+GGG | + | chr2_2:1574859-1574878 | Msa0229740:intron | 40.0% |
| ! | CTGTTTCCTAAATCTGAGGT+AGG | + | chr2_2:1574935-1574954 | Msa0229740:intron | 40.0% |
| ! | ATTCTTTGGAGGAAAAGAGG+AGG | - | chr2_2:1574980-1574999 | None:intergenic | 40.0% |
| TGGCTATTGGTCAAGACTAT+AGG | + | chr2_2:1575025-1575044 | Msa0229740:intron | 40.0% | |
| !!! | GTTTCTTTTGGTGCCTTAGA+CGG | - | chr2_2:1575067-1575086 | None:intergenic | 40.0% |
| !! | CCAATGGACTACATGTTTGA+CGG | - | chr2_2:1575156-1575175 | None:intergenic | 40.0% |
| GTGTTTACCCCCTGTAATAT+AGG | + | chr2_2:1575306-1575325 | Msa0229740:intron | 40.0% | |
| GAAATGGCCTATATTACAGG+GGG | - | chr2_2:1575316-1575335 | None:intergenic | 40.0% | |
| GGAAATGGCCTATATTACAG+GGG | - | chr2_2:1575317-1575336 | None:intergenic | 40.0% | |
| CGGAAATGGCCTATATTACA+GGG | - | chr2_2:1575318-1575337 | None:intergenic | 40.0% | |
| CCTGTAATATAGGCCATTTC+CGG | + | chr2_2:1575316-1575335 | Msa0229740:intron | 40.0% | |
| ATTTGCTCAAATGAACAGGG+GGG | + | chr2_2:1575459-1575478 | Msa0229740:intron | 40.0% | |
| GGGGGTGAAATATTCAATGA+AGG | + | chr2_2:1575539-1575558 | Msa0229740:intron | 40.0% | |
| ! | TATTTTACAGGGGGGAAAAC+CGG | + | chr2_2:1575610-1575629 | Msa0229740:intron | 40.0% |
| CCGGAAATGACCTATATTAC+AGG | + | chr2_2:1575629-1575648 | Msa0229740:intron | 40.0% | |
| TGTTTACCCCCCTGTAATAT+AGG | - | chr2_2:1575642-1575661 | None:intergenic | 40.0% | |
| TGTCTTTCAGAATGCATCAC+AGG | + | chr2_2:1575723-1575742 | Msa0229740:intron | 40.0% | |
| TTTCAGAATGCATCACAGGA+TGG | + | chr2_2:1575727-1575746 | Msa0229740:intron | 40.0% | |
| CACAGGATGGAAACAATAGA+AGG | + | chr2_2:1575740-1575759 | Msa0229740:CDS | 40.0% | |
| TCAAGATTGCCAATGCTAAG+AGG | + | chr2_2:1575803-1575822 | Msa0229740:CDS | 40.0% | |
| CAAGATTGCCAATGCTAAGA+GGG | + | chr2_2:1575804-1575823 | Msa0229740:CDS | 40.0% | |
| !! | AATTTGCTGATCACCAAGTG+CGG | + | chr2_2:1575839-1575858 | Msa0229740:CDS | 40.0% |
| ! | TATAATTTTGTGGGCATGGG+CGG | + | chr2_2:1575986-1576005 | Msa0229740:three_prime_UTR | 40.0% |
| !! | CAACTCGGTGTAGTGTAGAA+GGG | - | chr2_2:1568924-1568943 | None:intergenic | 45.0% |
| !! | TCAACTCGGTGTAGTGTAGA+AGG | - | chr2_2:1568925-1568944 | None:intergenic | 45.0% |
| GTACACCGTTATGGTTACGT+TGG | + | chr2_2:1569101-1569120 | Msa0229740:CDS | 45.0% | |
| ! | ACCTGTTTCCGTTCAAGTTC+AGG | + | chr2_2:1569242-1569261 | Msa0229740:CDS | 45.0% |
| TCCTGAACTTGAACGGAAAC+AGG | - | chr2_2:1569246-1569265 | None:intergenic | 45.0% | |
| !! | GGAAGCTTGTTAAGGGTGTT+AGG | + | chr2_2:1569277-1569296 | Msa0229740:CDS | 45.0% |
| ! | GAGCCATAGTTGGATTTTGG+GGG | + | chr2_2:1569925-1569944 | Msa0229740:intron | 45.0% |
| CTTCCCCCAAAATCCAACTA+TGG | - | chr2_2:1569931-1569950 | None:intergenic | 45.0% | |
| GTGCATGTTTGGTTATGTGG+TGG | + | chr2_2:1570058-1570077 | Msa0229740:intron | 45.0% | |
| TCAGGTTATTGCGCAGAGAA+CGG | - | chr2_2:1570622-1570641 | None:intergenic | 45.0% | |
| TTCATGTTGCTAGACGGTTC+AGG | - | chr2_2:1570640-1570659 | None:intergenic | 45.0% | |
| TGATGAACTGCATCAACGAG+AGG | - | chr2_2:1570740-1570759 | None:intergenic | 45.0% | |
| CTTCTTCGACTATCAGCACT+AGG | + | chr2_2:1571252-1571271 | Msa0229740:intron | 45.0% | |
| AGAGAGAGAATAAGCAGTGG+AGG | + | chr2_2:1571307-1571326 | Msa0229740:intron | 45.0% | |
| CTCGAAGGATTATGAGACCA+TGG | + | chr2_2:1571340-1571359 | Msa0229740:intron | 45.0% | |
| GGATTATGAGACCATGGTAC+AGG | + | chr2_2:1571346-1571365 | Msa0229740:intron | 45.0% | |
| ! | CTCTTTTGCTGGTGATCAAG+AGG | + | chr2_2:1571462-1571481 | Msa0229740:intron | 45.0% |
| ! | TGGTGATCAAGAGGTACAGA+GGG | + | chr2_2:1571471-1571490 | Msa0229740:intron | 45.0% |
| AAGCATGGTGCCCAAACTTA+TGG | + | chr2_2:1571529-1571548 | Msa0229740:intron | 45.0% | |
| ACTTATGGCACACTTGACAC+TGG | + | chr2_2:1571544-1571563 | Msa0229740:intron | 45.0% | |
| TCAACTGCAAATGAGGCAGA+GGG | - | chr2_2:1571699-1571718 | None:intergenic | 45.0% | |
| TGCTTCCTCAACTGCAAATG+AGG | - | chr2_2:1571706-1571725 | None:intergenic | 45.0% | |
| GGTTCCATTCCCATAGAAGT+TGG | - | chr2_2:1571801-1571820 | None:intergenic | 45.0% | |
| GCATCTGGATGTCACTCTTA+GGG | - | chr2_2:1571873-1571892 | None:intergenic | 45.0% | |
| TATTTCTCCATGTGCGCATC+TGG | - | chr2_2:1571888-1571907 | None:intergenic | 45.0% | |
| CCCTAGTTGCCAAGAATTCT+TGG | + | chr2_2:1572063-1572082 | Msa0229740:intron | 45.0% | |
| GACATGTTGTAACGCGTGAT+CGG | - | chr2_2:1572091-1572110 | None:intergenic | 45.0% | |
| ! | AGTTGGTGTGCCTTAATCAC+AGG | + | chr2_2:1572292-1572311 | Msa0229740:intron | 45.0% |
| TGCCATTGATGTTTCCGTCT+TGG | - | chr2_2:1572392-1572411 | None:intergenic | 45.0% | |
| CTGGTTATAGCCAGTAACAG+GGG | + | chr2_2:1572612-1572631 | Msa0229740:intron | 45.0% | |
| CTATTGTAGCAGCAGCATCT+AGG | + | chr2_2:1573101-1573120 | Msa0229740:intron | 45.0% | |
| GCATTCTCGCAAAAAAGACG+CGG | + | chr2_2:1573232-1573251 | Msa0229740:CDS | 45.0% | |
| TGTGTACCTTTATCCTGTCC+TGG | + | chr2_2:1573267-1573286 | Msa0229740:CDS | 45.0% | |
| TTCATTTGGCCCATGTAACC+AGG | - | chr2_2:1573288-1573307 | None:intergenic | 45.0% | |
| TGGTTACATGGGCCAAATGA+AGG | + | chr2_2:1573287-1573306 | Msa0229740:CDS | 45.0% | |
| AAGTTGACTGCTGCCGAAAT+TGG | + | chr2_2:1573311-1573330 | Msa0229740:CDS | 45.0% | |
| ! | GCTGGATCGTGCTCTTTTAT+AGG | - | chr2_2:1573356-1573375 | None:intergenic | 45.0% |
| TTGGTTGTGATCTGCCACAA+AGG | + | chr2_2:1573434-1573453 | Msa0229740:CDS | 45.0% | |
| ! | TGTTAGGACCTTGGTAACCA+TGG | + | chr2_2:1573825-1573844 | Msa0229740:intron | 45.0% |
| CATGTCAGATTCTACTGGAC+TGG | + | chr2_2:1573916-1573935 | Msa0229740:intron | 45.0% | |
| TTCAACCTAGGAACCAAGCT+TGG | - | chr2_2:1574049-1574068 | None:intergenic | 45.0% | |
| AGCATGCTGGAAAGCAAAGT+AGG | - | chr2_2:1574143-1574162 | None:intergenic | 45.0% | |
| TAAATGGGTGTAGAGCATGC+TGG | - | chr2_2:1574156-1574175 | None:intergenic | 45.0% | |
| ! | ACAAGGCTTCCAGGTTGTTT+TGG | + | chr2_2:1574713-1574732 | Msa0229740:intron | 45.0% |
| !!! | CACTGTCTTTTTTCAGGCCA+TGG | + | chr2_2:1574858-1574877 | Msa0229740:intron | 45.0% |
| TGAAGGCCTACCTCAGATTT+AGG | - | chr2_2:1574944-1574963 | None:intergenic | 45.0% | |
| CAGTAGTAGAGCATGGCTAT+TGG | + | chr2_2:1575012-1575031 | Msa0229740:intron | 45.0% | |
| GTCACATCATCAACCGTCTA+AGG | + | chr2_2:1575051-1575070 | Msa0229740:intron | 45.0% | |
| ! | GACGGCATGCATTTTCATCA+GGG | - | chr2_2:1575138-1575157 | None:intergenic | 45.0% |
| ! | TGACGGCATGCATTTTCATC+AGG | - | chr2_2:1575139-1575158 | None:intergenic | 45.0% |
| CCGTCAAACATGTAGTCCAT+TGG | + | chr2_2:1575153-1575172 | Msa0229740:intron | 45.0% | |
| ! | AGGCACGGCAGATTTTCATT+TGG | + | chr2_2:1575257-1575276 | Msa0229740:intron | 45.0% |
| CCGGAAATGGCCTATATTAC+AGG | - | chr2_2:1575319-1575338 | None:intergenic | 45.0% | |
| GCACAAGAAGCTTGCATTTC+TGG | + | chr2_2:1575864-1575883 | Msa0229740:CDS | 45.0% | |
| ATCCAGTGTGAAACATGGTG+TGG | + | chr2_2:1576009-1576028 | Msa0229740:three_prime_UTR | 45.0% | |
| !! | AATAATAAAGTTAAATATTA+AGG | + | chr2_2:1569492-1569511 | Msa0229740:intron | 5.0% |
| ATTCTTCGAAACTCCGACGC+CGG | + | chr2_2:1568996-1569015 | Msa0229740:CDS | 50.0% | |
| GAAACTACGAAGACGGTGCA+TGG | + | chr2_2:1569079-1569098 | Msa0229740:CDS | 50.0% | |
| CACCGTTATGGTTACGTTGG+AGG | + | chr2_2:1569104-1569123 | Msa0229740:CDS | 50.0% | |
| GGAGGTCCAAAGTAACTCGA+AGG | + | chr2_2:1571325-1571344 | Msa0229740:intron | 50.0% | |
| CTAACTCTTGCCCTGTACCA+TGG | - | chr2_2:1571360-1571379 | None:intergenic | 50.0% | |
| AGAGTTAGACTGCCATGGCA+TGG | + | chr2_2:1571372-1571391 | Msa0229740:intron | 50.0% | |
| GAGTTAGACTGCCATGGCAT+GGG | + | chr2_2:1571373-1571392 | Msa0229740:intron | 50.0% | |
| ! | CTGGTGATCAAGAGGTACAG+AGG | + | chr2_2:1571470-1571489 | Msa0229740:intron | 50.0% |
| ATGGCACACTTGACACTGGA+TGG | + | chr2_2:1571548-1571567 | Msa0229740:intron | 50.0% | |
| CTCAACTGCAAATGAGGCAG+AGG | - | chr2_2:1571700-1571719 | None:intergenic | 50.0% | |
| CTCTGCCTCATTTGCAGTTG+AGG | + | chr2_2:1571698-1571717 | Msa0229740:intron | 50.0% | |
| CGCATCTGGATGTCACTCTT+AGG | - | chr2_2:1571874-1571893 | None:intergenic | 50.0% | |
| TGCGAAGCTCAGAACAAAGC+TGG | + | chr2_2:1571993-1572012 | Msa0229740:intron | 50.0% | |
| CAACATGTCGCGCGTAATTG+TGG | + | chr2_2:1572102-1572121 | Msa0229740:intron | 50.0% | |
| !!! | CTATCTTTTCTGGTGCCGAC+AGG | - | chr2_2:1572323-1572342 | None:intergenic | 50.0% |
| GGCCAAGACGGAAACATCAA+TGG | + | chr2_2:1572387-1572406 | Msa0229740:intron | 50.0% | |
| ! | ATGCACTGGCAAGGTTTGTG+TGG | + | chr2_2:1572431-1572450 | Msa0229740:intron | 50.0% |
| ! | TGCACTGGCAAGGTTTGTGT+GGG | + | chr2_2:1572432-1572451 | Msa0229740:intron | 50.0% |
| CAGTAAAGAAGCCGATCCTG+TGG | - | chr2_2:1572460-1572479 | None:intergenic | 50.0% | |
| CAGTGAGAATCCCCTGTTAC+TGG | - | chr2_2:1572625-1572644 | None:intergenic | 50.0% | |
| ! | CACTAGCTCTTGTGAGCTCT+AGG | + | chr2_2:1572716-1572735 | Msa0229740:intron | 50.0% |
| !! | TAGCTCTTGTGAGCTCTAGG+CGG | + | chr2_2:1572719-1572738 | Msa0229740:intron | 50.0% |
| ! | TAGCAGCAGCATCTAGGATC+AGG | + | chr2_2:1573107-1573126 | Msa0229740:intron | 50.0% |
| ! | AAAAGAGCACGATCCAGCTG+TGG | + | chr2_2:1573358-1573377 | Msa0229740:CDS | 50.0% |
| !! | TCCAGCTGTGGCTTTGTTCT+TGG | + | chr2_2:1573370-1573389 | Msa0229740:CDS | 50.0% |
| TCCAAGAACAAAGCCACAGC+TGG | - | chr2_2:1573374-1573393 | None:intergenic | 50.0% | |
| AAGGTCCTAACAGAGTCACG+AGG | - | chr2_2:1573817-1573836 | None:intergenic | 50.0% | |
| TCGTGACTCTGTTAGGACCT+TGG | + | chr2_2:1573816-1573835 | Msa0229740:intron | 50.0% | |
| TATCCTTGAGAGGCCAAGCT+TGG | + | chr2_2:1574033-1574052 | Msa0229740:intron | 50.0% | |
| !!! | GTCTTTTTTCAGGCCATGGG+TGG | + | chr2_2:1574862-1574881 | Msa0229740:intron | 50.0% |
| AACGGCTCAGTAGTAGAGCA+TGG | + | chr2_2:1575005-1575024 | Msa0229740:intron | 50.0% | |
| ACAGGGGGTAAAACCGGAAA+TGG | - | chr2_2:1575332-1575351 | None:intergenic | 50.0% | |
| TGCCACACCATGTTTCACAC+TGG | - | chr2_2:1576014-1576033 | None:intergenic | 50.0% | |
| ATTTCTCTCTTCGCCGGCGT+CGG | - | chr2_2:1569012-1569031 | None:intergenic | 55.0% | |
| ACCCGCATTTCTCTCTTCGC+CGG | - | chr2_2:1569018-1569037 | None:intergenic | 55.0% | |
| CGGTGCATGGTACACCGTTA+TGG | + | chr2_2:1569092-1569111 | Msa0229740:CDS | 55.0% | |
| GGGCAAGAGTTAGACTGCCA+TGG | + | chr2_2:1571367-1571386 | Msa0229740:intron | 55.0% | |
| ACTGCCATGGCATGGGTGAT+TGG | + | chr2_2:1571380-1571399 | Msa0229740:intron | 55.0% | |
| CTGCCATGGCATGGGTGATT+GGG | + | chr2_2:1571381-1571400 | Msa0229740:intron | 55.0% | |
| TGCCATGGCATGGGTGATTG+GGG | + | chr2_2:1571382-1571401 | Msa0229740:intron | 55.0% | |
| TTCCCCAATCACCCATGCCA+TGG | - | chr2_2:1571387-1571406 | None:intergenic | 55.0% | |
| CATGGTGGCAATGGTTGTGG+TGG | - | chr2_2:1571582-1571601 | None:intergenic | 55.0% | |
| GGACATGGTGGCAATGGTTG+TGG | - | chr2_2:1571585-1571604 | None:intergenic | 55.0% | |
| TGTCGTGGACATGGTGGCAA+TGG | - | chr2_2:1571591-1571610 | None:intergenic | 55.0% | |
| TCTAATGGCTCAGGTGAGCG+TGG | - | chr2_2:1571627-1571646 | None:intergenic | 55.0% | |
| GTGACATCCAGATGCGCACA+TGG | + | chr2_2:1571878-1571897 | Msa0229740:intron | 55.0% | |
| TAGGACGTCGCGCGTAATTG+TGG | + | chr2_2:1572138-1572157 | Msa0229740:intron | 55.0% | |
| ! | GCACTGGCAAGGTTTGTGTG+GGG | + | chr2_2:1572433-1572452 | Msa0229740:intron | 55.0% |
| CACTGGCAAGGTTTGTGTGG+GGG | + | chr2_2:1572434-1572453 | Msa0229740:intron | 55.0% | |
| TTGGCCCATGTAACCAGGAC+AGG | - | chr2_2:1573283-1573302 | None:intergenic | 55.0% | |
| ACGCGCCAAACGATCTGTTG+TGG | + | chr2_2:1573646-1573665 | Msa0229740:CDS | 55.0% | |
| CGCGCCAAACGATCTGTTGT+GGG | + | chr2_2:1573647-1573666 | Msa0229740:CDS | 55.0% | |
| GGCACCCACAACAGATCGTT+TGG | - | chr2_2:1573654-1573673 | None:intergenic | 55.0% | |
| GAACCAAGCTTGGCCTCTCA+AGG | - | chr2_2:1574039-1574058 | None:intergenic | 55.0% | |
| AGAGGCCAAGCTTGGTTCCT+AGG | + | chr2_2:1574041-1574060 | Msa0229740:intron | 55.0% | |
| AGTCAGCCCTGACGAAAGCA+TGG | + | chr2_2:1574300-1574319 | Msa0229740:intron | 55.0% | |
| GTGCAACATAATGGCACCCC+TGG | - | chr2_2:1574485-1574504 | None:intergenic | 55.0% | |
| GGCGGATCCAGTGTGAAACA+TGG | + | chr2_2:1576004-1576023 | Msa0229740:three_prime_UTR | 55.0% | |
| CGCCGGCGAAGAGAGAAATG+CGG | + | chr2_2:1569013-1569032 | Msa0229740:CDS | 60.0% | |
| GCCGGCGAAGAGAGAAATGC+GGG | + | chr2_2:1569014-1569033 | Msa0229740:CDS | 60.0% | |
| TCTGGCTGTCGTGGACATGG+TGG | - | chr2_2:1571597-1571616 | None:intergenic | 60.0% | |
| CACTCTGGCTGTCGTGGACA+TGG | - | chr2_2:1571600-1571619 | None:intergenic | 60.0% | |
| AATGGCTCAGGTGAGCGTGG+TGG | - | chr2_2:1571624-1571643 | None:intergenic | 60.0% | |
| TTACGCGCGACGTCCTAGCT+TGG | - | chr2_2:1572135-1572154 | None:intergenic | 60.0% | |
| TGGCAGAGCTCGCATCACTG+CGG | + | chr2_2:1572407-1572426 | Msa0229740:intron | 60.0% | |
| CGCATCACTGCGGAATGCAC+TGG | + | chr2_2:1572417-1572436 | Msa0229740:intron | 60.0% | |
| ! | CACTGCGGAATGCACTGGCA+AGG | + | chr2_2:1572422-1572441 | Msa0229740:intron | 60.0% |
| AAGGTTTGTGTGGGGGCCAC+AGG | + | chr2_2:1572441-1572460 | Msa0229740:intron | 60.0% | |
| TTGTGTGGGGGCCACAGGAT+CGG | + | chr2_2:1572446-1572465 | Msa0229740:intron | 60.0% | |
| GTGGGTGCCTGTTCTCCTGA+AGG | + | chr2_2:1573665-1573684 | Msa0229740:CDS | 60.0% | |
| GCTTCTTGTGCAGCCGCACT+TGG | - | chr2_2:1575855-1575874 | None:intergenic | 60.0% | |
| GGTGGTCACTCTGGCTGTCG+TGG | - | chr2_2:1571606-1571625 | None:intergenic | 65.0% | |
| GGTGAGCGTGGTGGTCACTC+TGG | - | chr2_2:1571615-1571634 | None:intergenic | 65.0% | |
| GTTTGGCGCGTCGTCTTCCC+TGG | - | chr2_2:1573637-1573656 | None:intergenic | 65.0% | |
| GCGCGTCGTCTTCCCTGGAG+AGG | - | chr2_2:1573632-1573651 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 1568881 | 1576063 | 1568881 | ID=Msa0229740;Name=Msa0229740 |
| chr2_2 | mRNA | 1568881 | 1576063 | 1568881 | ID=Msa0229740-mRNA-1;Parent=Msa0229740;Name=Msa0229740-mRNA-1;_AED=0.13;_eAED=0.13;_QI=65|1|1|1|1|1|6|154|427 |
| chr2_2 | exon | 1568881 | 1569362 | 1568881 | ID=Msa0229740-mRNA-1:exon:490;Parent=Msa0229740-mRNA-1 |
| chr2_2 | exon | 1573218 | 1573502 | 1573218 | ID=Msa0229740-mRNA-1:exon:491;Parent=Msa0229740-mRNA-1 |
| chr2_2 | exon | 1573638 | 1573686 | 1573638 | ID=Msa0229740-mRNA-1:exon:492;Parent=Msa0229740-mRNA-1 |
| chr2_2 | exon | 1574302 | 1574578 | 1574302 | ID=Msa0229740-mRNA-1:exon:493;Parent=Msa0229740-mRNA-1 |
| chr2_2 | exon | 1574874 | 1574952 | 1574874 | ID=Msa0229740-mRNA-1:exon:494;Parent=Msa0229740-mRNA-1 |
| chr2_2 | exon | 1575733 | 1576063 | 1575733 | ID=Msa0229740-mRNA-1:exon:495;Parent=Msa0229740-mRNA-1 |
| chr2_2 | five_prime_UTR | 1568881 | 1568945 | 1568881 | ID=Msa0229740-mRNA-1:five_prime_utr;Parent=Msa0229740-mRNA-1 |
| chr2_2 | CDS | 1568946 | 1569362 | 1568946 | ID=Msa0229740-mRNA-1:cds;Parent=Msa0229740-mRNA-1 |
| chr2_2 | CDS | 1573218 | 1573502 | 1573218 | ID=Msa0229740-mRNA-1:cds;Parent=Msa0229740-mRNA-1 |
| chr2_2 | CDS | 1573638 | 1573686 | 1573638 | ID=Msa0229740-mRNA-1:cds;Parent=Msa0229740-mRNA-1 |
| chr2_2 | CDS | 1574302 | 1574578 | 1574302 | ID=Msa0229740-mRNA-1:cds;Parent=Msa0229740-mRNA-1 |
| chr2_2 | CDS | 1574874 | 1574952 | 1574874 | ID=Msa0229740-mRNA-1:cds;Parent=Msa0229740-mRNA-1 |
| chr2_2 | CDS | 1575733 | 1575909 | 1575733 | ID=Msa0229740-mRNA-1:cds;Parent=Msa0229740-mRNA-1 |
| chr2_2 | three_prime_UTR | 1575910 | 1576063 | 1575910 | ID=Msa0229740-mRNA-1:three_prime_utr;Parent=Msa0229740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
