Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160930 | XP_024627142.1 | 98.265 | 461 | 8 | 0 | 1 | 461 | 1 | 461 | 0.0 | 936 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160930 | sp|P25011|CCNB1_SOYBN | 72.113 | 459 | 111 | 9 | 1 | 456 | 1 | 445 | 0.0 | 625 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160930 | A0A396H4G4 | 98.265 | 461 | 8 | 0 | 1 | 461 | 1 | 461 | 0.0 | 936 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa1160930 | 0.822004 | 2.986363e-53 | -8.615850e-47 |
| Msa0030070 | Msa1160930 | 0.820666 | 6.079691e-53 | -8.615850e-47 |
| Msa0033610 | Msa1160930 | 0.818335 | 2.068664e-52 | -8.615850e-47 |
| Msa0033640 | Msa1160930 | 0.807802 | 4.231379e-50 | -8.615850e-47 |
| Msa0050530 | Msa1160930 | 0.850207 | 1.971307e-60 | -8.615850e-47 |
| Msa0091350 | Msa1160930 | 0.804094 | 2.547744e-49 | -8.615850e-47 |
| Msa0100600 | Msa1160930 | 0.853529 | 2.249592e-61 | -8.615850e-47 |
| Msa0100890 | Msa1160930 | 0.836077 | 1.156225e-56 | -8.615850e-47 |
| Msa0647440 | Msa1160930 | 0.801514 | 8.685392e-49 | -8.615850e-47 |
| Msa0657210 | Msa1160930 | 0.808379 | 3.187628e-50 | -8.615850e-47 |
| Msa0663290 | Msa1160930 | 0.806410 | 8.337774e-50 | -8.615850e-47 |
| Msa0664070 | Msa1160930 | 0.800948 | 1.134034e-48 | -8.615850e-47 |
| Msa0687370 | Msa1160930 | 0.805675 | 1.190564e-49 | -8.615850e-47 |
| Msa0688380 | Msa1160930 | 0.809000 | 2.348395e-50 | -8.615850e-47 |
| Msa0689830 | Msa1160930 | 0.814208 | 1.732108e-51 | -8.615850e-47 |
| Msa0701250 | Msa1160930 | 0.807453 | 5.018143e-50 | -8.615850e-47 |
| Msa0707260 | Msa1160930 | 0.811071 | 8.408727e-51 | -8.615850e-47 |
| Msa0717900 | Msa1160930 | 0.806908 | 6.545889e-50 | -8.615850e-47 |
| Msa0720280 | Msa1160930 | 0.821307 | 4.328272e-53 | -8.615850e-47 |
| Msa0737140 | Msa1160930 | 0.802296 | 6.000833e-49 | -8.615850e-47 |
| Msa0751720 | Msa1160930 | 0.825375 | 4.850999e-54 | -8.615850e-47 |
| Msa0803140 | Msa1160930 | 0.826585 | 2.503022e-54 | -8.615850e-47 |
| Msa0816080 | Msa1160930 | 0.831678 | 1.456962e-55 | -8.615850e-47 |
| Msa0816230 | Msa1160930 | 0.824927 | 6.191590e-54 | -8.615850e-47 |
| Msa0837680 | Msa1160930 | 0.836788 | 7.622504e-57 | -8.615850e-47 |
| Msa0841500 | Msa1160930 | 0.806361 | 8.538926e-50 | -8.615850e-47 |
| Msa0125590 | Msa1160930 | 0.835922 | 1.265690e-56 | -8.615850e-47 |
| Msa0127340 | Msa1160930 | 0.801132 | 1.039846e-48 | -8.615850e-47 |
| Msa0186180 | Msa1160930 | 0.803338 | 3.655590e-49 | -8.615850e-47 |
| Msa0186360 | Msa1160930 | 0.818234 | 2.180006e-52 | -8.615850e-47 |
| Msa0204970 | Msa1160930 | 0.806030 | 1.002637e-49 | -8.615850e-47 |
| Msa0373170 | Msa1160930 | 0.803898 | 2.798617e-49 | -8.615850e-47 |
| Msa0382230 | Msa1160930 | 0.810189 | 1.304522e-50 | -8.615850e-47 |
| Msa0421750 | Msa1160930 | 0.811935 | 5.457986e-51 | -8.615850e-47 |
| Msa0433630 | Msa1160930 | 0.849926 | 2.362909e-60 | -8.615850e-47 |
| Msa0433760 | Msa1160930 | 0.812464 | 4.183480e-51 | -8.615850e-47 |
| Msa0467690 | Msa1160930 | 0.808054 | 3.738438e-50 | -8.615850e-47 |
| Msa0477480 | Msa1160930 | 0.863697 | 2.068663e-64 | -8.615850e-47 |
| Msa0477630 | Msa1160930 | 0.817199 | 3.733233e-52 | -8.615850e-47 |
| Msa1000780 | Msa1160930 | 0.870342 | 1.568348e-66 | -8.615850e-47 |
| Msa1021560 | Msa1160930 | 0.821738 | 3.441102e-53 | -8.615850e-47 |
| Msa1074150 | Msa1160930 | 0.814390 | 1.578925e-51 | -8.615850e-47 |
| Msa1078990 | Msa1160930 | 0.808598 | 2.863391e-50 | -8.615850e-47 |
| Msa1085680 | Msa1160930 | 0.803815 | 2.911381e-49 | -8.615850e-47 |
| Msa1105540 | Msa1160930 | 0.806456 | 8.155355e-50 | -8.615850e-47 |
| Msa1105580 | Msa1160930 | 0.802320 | 5.932155e-49 | -8.615850e-47 |
| Msa0249870 | Msa1160930 | 0.800646 | 1.307213e-48 | -8.615850e-47 |
| Msa0281540 | Msa1160930 | 0.803149 | 4.001407e-49 | -8.615850e-47 |
| Msa0344110 | Msa1160930 | 0.804024 | 2.633926e-49 | -8.615850e-47 |
| Msa1119380 | Msa1160930 | 0.800966 | 1.124662e-48 | -8.615850e-47 |
| Msa1148930 | Msa1160930 | 0.802582 | 5.239054e-49 | -8.615850e-47 |
| Msa1160930 | Msa1163180 | 0.805496 | 1.298306e-49 | -8.615850e-47 |
| Msa1160930 | Msa1166820 | 0.802691 | 4.975959e-49 | -8.615850e-47 |
| Msa1160930 | Msa1267930 | 0.806676 | 7.325865e-50 | -8.615850e-47 |
| Msa1160930 | Msa1282300 | 0.814365 | 1.598684e-51 | -8.615850e-47 |
| Msa1160930 | Msa1294460 | 0.804200 | 2.421032e-49 | -8.615850e-47 |
| Msa1160930 | Msa1294790 | 0.808696 | 2.727988e-50 | -8.615850e-47 |
| Msa1160930 | Msa1339230 | 0.840777 | 7.087950e-58 | -8.615850e-47 |
| Msa1160930 | Msa1393560 | 0.804601 | 1.997423e-49 | -8.615850e-47 |
| Msa1160930 | Msa1399190 | 0.845718 | 3.409743e-59 | -8.615850e-47 |
| Msa1160930 | Msa1426320 | 0.803028 | 4.237349e-49 | -8.615850e-47 |
| Msa1160930 | Msa1432060 | 0.807899 | 4.034674e-50 | -8.615850e-47 |
| Msa1160930 | Msa1435100 | 0.803798 | 2.935003e-49 | -8.615850e-47 |
| Msa1160930 | Msa1439730 | 0.813176 | 2.921524e-51 | -8.615850e-47 |
| Msa0514020 | Msa1160930 | 0.827838 | 1.254021e-54 | -8.615850e-47 |
| Msa0520680 | Msa1160930 | 0.814845 | 1.252231e-51 | -8.615850e-47 |
| Msa0521510 | Msa1160930 | 0.842313 | 2.791273e-58 | -8.615850e-47 |
| Msa0521530 | Msa1160930 | 0.857288 | 1.807361e-62 | -8.615850e-47 |
| Msa0527850 | Msa1160930 | 0.817033 | 4.066458e-52 | -8.615850e-47 |
| Msa0541740 | Msa1160930 | 0.808282 | 3.343317e-50 | -8.615850e-47 |
| Msa0554300 | Msa1160930 | 0.815179 | 1.055389e-51 | -8.615850e-47 |
| Msa0572830 | Msa1160930 | 0.831252 | 1.854700e-55 | -8.615850e-47 |
| Msa0576330 | Msa1160930 | 0.806296 | 8.811502e-50 | -8.615850e-47 |
| Msa0582460 | Msa1160930 | 0.801752 | 7.764938e-49 | -8.615850e-47 |
| Msa0584530 | Msa1160930 | 0.808566 | 2.907907e-50 | -8.615850e-47 |
| Msa0586200 | Msa1160930 | 0.815679 | 8.169809e-52 | -8.615850e-47 |
| Msa0846900 | Msa1160930 | 0.827222 | 1.762037e-54 | -8.615850e-47 |
| Msa0861440 | Msa1160930 | 0.854061 | 1.581666e-61 | -8.615850e-47 |
| Msa0926310 | Msa1160930 | 0.870472 | 1.422751e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160930 | MtrunA17_Chr7g0255771 | 98.265 | 461 | 8 | 0 | 1 | 461 | 1 | 461 | 0.0 | 936 |
| Msa1160930 | MtrunA17_Chr5g0441371 | 53.247 | 462 | 164 | 14 | 1 | 455 | 1 | 417 | 1.28e-152 | 440 |
| Msa1160930 | MtrunA17_Chr8g0370671 | 47.292 | 277 | 137 | 3 | 182 | 456 | 159 | 428 | 1.08e-84 | 266 |
| Msa1160930 | MtrunA17_Chr5g0406741 | 46.014 | 276 | 142 | 2 | 182 | 456 | 155 | 424 | 4.21e-83 | 262 |
| Msa1160930 | MtrunA17_Chr1g0148681 | 41.026 | 273 | 156 | 5 | 182 | 451 | 140 | 410 | 1.21e-61 | 206 |
| Msa1160930 | MtrunA17_Chr8g0357001 | 44.000 | 225 | 119 | 3 | 189 | 412 | 476 | 694 | 7.72e-60 | 208 |
| Msa1160930 | MtrunA17_Chr1g0152871 | 40.078 | 257 | 149 | 4 | 199 | 450 | 91 | 347 | 7.04e-59 | 197 |
| Msa1160930 | MtrunA17_Chr3g0125051 | 39.007 | 282 | 161 | 8 | 178 | 452 | 220 | 497 | 1.71e-57 | 197 |
| Msa1160930 | MtrunA17_Chr3g0138431 | 39.636 | 275 | 157 | 7 | 182 | 451 | 197 | 467 | 6.78e-57 | 195 |
| Msa1160930 | MtrunA17_Chr2g0332181 | 38.276 | 290 | 168 | 8 | 167 | 449 | 134 | 419 | 9.00e-52 | 180 |
| Msa1160930 | MtrunA17_Chr3g0103471 | 38.783 | 263 | 149 | 5 | 192 | 449 | 15 | 270 | 1.06e-51 | 176 |
| Msa1160930 | MtrunA17_Chr3g0125041 | 36.765 | 272 | 161 | 9 | 175 | 439 | 220 | 487 | 1.07e-51 | 182 |
| Msa1160930 | MtrunA17_Chr3g0102851 | 40.486 | 247 | 135 | 6 | 198 | 439 | 31 | 270 | 9.41e-51 | 174 |
| Msa1160930 | MtrunA17_Chr2g0332171 | 36.842 | 285 | 171 | 7 | 177 | 455 | 200 | 481 | 3.93e-50 | 177 |
| Msa1160930 | MtrunA17_Chr5g0418901 | 93.827 | 81 | 5 | 0 | 252 | 332 | 7 | 87 | 4.16e-50 | 165 |
| Msa1160930 | MtrunA17_Chr3g0134411 | 37.354 | 257 | 155 | 5 | 199 | 450 | 91 | 346 | 2.05e-48 | 170 |
| Msa1160930 | MtrunA17_Chr3g0102861 | 38.132 | 257 | 147 | 6 | 198 | 449 | 21 | 270 | 2.67e-48 | 167 |
| Msa1160930 | MtrunA17_Chr3g0102621 | 37.354 | 257 | 149 | 5 | 198 | 449 | 27 | 276 | 2.21e-47 | 164 |
| Msa1160930 | MtrunA17_Chr3g0134401 | 35.686 | 255 | 160 | 4 | 199 | 450 | 74 | 327 | 3.65e-47 | 166 |
| Msa1160930 | MtrunA17_Chr3g0134441 | 36.187 | 257 | 158 | 5 | 204 | 455 | 69 | 324 | 9.55e-43 | 154 |
| Msa1160930 | MtrunA17_Chr3g0134421 | 33.577 | 274 | 167 | 5 | 180 | 450 | 78 | 339 | 4.44e-41 | 150 |
| Msa1160930 | MtrunA17_Chr6g0462981 | 38.148 | 270 | 142 | 8 | 198 | 458 | 45 | 298 | 6.57e-41 | 148 |
| Msa1160930 | MtrunA17_Chr6g0462911 | 37.838 | 259 | 135 | 7 | 198 | 449 | 45 | 284 | 2.08e-40 | 147 |
| Msa1160930 | MtrunA17_Chr3g0102631 | 40.976 | 205 | 114 | 3 | 249 | 449 | 2 | 203 | 3.42e-40 | 143 |
| Msa1160930 | MtrunA17_Chr3g0102651 | 40.976 | 205 | 114 | 3 | 249 | 449 | 2 | 203 | 3.42e-40 | 143 |
| Msa1160930 | MtrunA17_Chr3g0102661 | 40.976 | 205 | 114 | 3 | 249 | 449 | 2 | 203 | 3.42e-40 | 143 |
| Msa1160930 | MtrunA17_Chr3g0102671 | 40.976 | 205 | 114 | 3 | 249 | 449 | 2 | 203 | 3.42e-40 | 143 |
| Msa1160930 | MtrunA17_Chr5g0398791 | 42.373 | 177 | 94 | 2 | 197 | 370 | 1 | 172 | 1.17e-34 | 127 |
| Msa1160930 | MtrunA17_Chr3g0134431 | 31.897 | 232 | 133 | 6 | 210 | 438 | 22 | 231 | 2.32e-30 | 118 |
| Msa1160930 | MtrunA17_Chr2g0277271 | 44.304 | 79 | 39 | 2 | 213 | 290 | 14 | 88 | 2.49e-15 | 71.6 |
| Msa1160930 | MtrunA17_Chr5g0398781 | 45.000 | 80 | 42 | 1 | 378 | 457 | 1 | 78 | 1.24e-14 | 68.9 |
| Msa1160930 | MtrunA17_Chr3g0134781 | 31.356 | 118 | 78 | 1 | 229 | 343 | 65 | 182 | 5.58e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160930 | AT5G06150.1 | 54.274 | 468 | 175 | 10 | 1 | 460 | 1 | 437 | 6.34e-158 | 455 |
| Msa1160930 | AT3G11520.1 | 55.361 | 457 | 156 | 13 | 1 | 456 | 1 | 410 | 1.00e-151 | 438 |
| Msa1160930 | AT4G37490.1 | 52.340 | 470 | 161 | 14 | 1 | 456 | 2 | 422 | 2.80e-140 | 409 |
| Msa1160930 | AT3G11520.2 | 55.797 | 414 | 135 | 13 | 1 | 413 | 1 | 367 | 6.16e-136 | 397 |
| Msa1160930 | AT2G26760.1 | 53.134 | 367 | 156 | 7 | 97 | 460 | 34 | 387 | 9.31e-125 | 368 |
| Msa1160930 | AT5G06150.2 | 54.286 | 350 | 127 | 8 | 1 | 342 | 1 | 325 | 3.46e-109 | 327 |
| Msa1160930 | AT1G20610.1 | 38.816 | 456 | 215 | 10 | 20 | 456 | 19 | 429 | 1.61e-92 | 287 |
| Msa1160930 | AT1G76310.1 | 39.529 | 425 | 204 | 10 | 37 | 457 | 56 | 431 | 2.28e-91 | 284 |
| Msa1160930 | AT1G76310.3 | 37.086 | 453 | 204 | 11 | 37 | 457 | 56 | 459 | 2.76e-85 | 269 |
| Msa1160930 | AT1G16330.1 | 41.558 | 308 | 167 | 5 | 154 | 457 | 350 | 648 | 2.29e-79 | 259 |
| Msa1160930 | AT1G76310.2 | 39.370 | 381 | 178 | 10 | 37 | 413 | 56 | 387 | 8.96e-79 | 250 |
| Msa1160930 | AT2G17620.1 | 48.551 | 276 | 135 | 2 | 182 | 456 | 154 | 423 | 3.29e-78 | 250 |
| Msa1160930 | AT4G35620.1 | 47.292 | 277 | 139 | 3 | 182 | 457 | 155 | 425 | 9.14e-75 | 241 |
| Msa1160930 | AT1G34460.2 | 45.322 | 342 | 107 | 10 | 11 | 342 | 121 | 392 | 9.61e-75 | 243 |
| Msa1160930 | AT1G34460.4 | 45.322 | 342 | 107 | 10 | 11 | 342 | 121 | 392 | 9.61e-75 | 243 |
| Msa1160930 | AT1G34460.7 | 45.322 | 342 | 110 | 10 | 11 | 342 | 121 | 395 | 1.41e-74 | 242 |
| Msa1160930 | AT1G34460.6 | 45.322 | 342 | 110 | 10 | 11 | 342 | 121 | 395 | 1.80e-74 | 242 |
| Msa1160930 | AT1G34460.3 | 45.322 | 342 | 110 | 10 | 11 | 342 | 121 | 395 | 1.80e-74 | 242 |
| Msa1160930 | AT1G34460.8 | 45.322 | 342 | 110 | 10 | 11 | 342 | 121 | 395 | 1.80e-74 | 242 |
| Msa1160930 | AT1G34460.1 | 45.322 | 342 | 110 | 10 | 11 | 342 | 121 | 395 | 1.80e-74 | 242 |
| Msa1160930 | AT1G34460.5 | 44.706 | 340 | 115 | 8 | 11 | 342 | 121 | 395 | 3.05e-74 | 242 |
| Msa1160930 | AT1G34460.9 | 45.266 | 338 | 108 | 10 | 15 | 342 | 111 | 381 | 3.36e-73 | 238 |
| Msa1160930 | AT4G35620.2 | 49.785 | 233 | 110 | 3 | 182 | 413 | 155 | 381 | 6.50e-65 | 214 |
| Msa1160930 | AT1G44110.1 | 40.221 | 271 | 155 | 6 | 181 | 447 | 177 | 444 | 5.78e-61 | 206 |
| Msa1160930 | AT1G80370.1 | 37.667 | 300 | 176 | 7 | 153 | 449 | 158 | 449 | 2.28e-59 | 202 |
| Msa1160930 | AT1G76310.4 | 38.907 | 311 | 143 | 8 | 37 | 343 | 56 | 323 | 3.97e-59 | 197 |
| Msa1160930 | AT1G77390.1 | 42.045 | 264 | 144 | 7 | 181 | 439 | 161 | 420 | 7.78e-59 | 200 |
| Msa1160930 | AT5G25380.3 | 39.194 | 273 | 159 | 6 | 181 | 449 | 156 | 425 | 8.53e-57 | 194 |
| Msa1160930 | AT5G25380.1 | 39.194 | 273 | 159 | 6 | 181 | 449 | 156 | 425 | 8.53e-57 | 194 |
| Msa1160930 | AT5G25380.4 | 39.194 | 273 | 159 | 6 | 181 | 449 | 162 | 431 | 9.39e-57 | 194 |
| Msa1160930 | AT5G25380.2 | 39.544 | 263 | 152 | 6 | 181 | 439 | 156 | 415 | 5.38e-56 | 192 |
| Msa1160930 | AT5G11300.1 | 39.711 | 277 | 160 | 6 | 181 | 453 | 155 | 428 | 1.63e-55 | 191 |
| Msa1160930 | AT1G15570.1 | 32.609 | 414 | 249 | 12 | 56 | 455 | 49 | 446 | 1.39e-54 | 189 |
| Msa1160930 | AT1G47210.2 | 38.129 | 278 | 163 | 7 | 184 | 455 | 88 | 362 | 1.51e-54 | 186 |
| Msa1160930 | AT5G43080.2 | 36.101 | 277 | 163 | 6 | 184 | 455 | 73 | 340 | 4.43e-54 | 184 |
| Msa1160930 | AT5G43080.1 | 35.461 | 282 | 163 | 6 | 184 | 455 | 73 | 345 | 3.95e-53 | 182 |
| Msa1160930 | AT1G47220.1 | 39.427 | 279 | 158 | 8 | 184 | 455 | 42 | 316 | 4.66e-53 | 181 |
| Msa1160930 | AT1G47230.1 | 33.240 | 358 | 200 | 9 | 107 | 457 | 32 | 357 | 5.03e-52 | 180 |
| Msa1160930 | AT1G20590.1 | 47.159 | 176 | 87 | 2 | 256 | 431 | 63 | 232 | 8.41e-51 | 173 |
| Msa1160930 | AT1G47230.2 | 33.333 | 357 | 202 | 10 | 107 | 457 | 32 | 358 | 2.58e-50 | 175 |
| Msa1160930 | AT5G11300.2 | 43.779 | 217 | 116 | 5 | 181 | 394 | 155 | 368 | 3.81e-49 | 173 |
| Msa1160930 | AT1G47210.1 | 42.453 | 106 | 56 | 4 | 184 | 285 | 88 | 192 | 3.67e-20 | 88.6 |
| Msa1160930 | AT1G14750.1 | 29.744 | 195 | 126 | 5 | 229 | 419 | 385 | 572 | 4.36e-15 | 78.2 |
| Msa1160930 | AT1G14750.3 | 29.231 | 195 | 127 | 5 | 229 | 419 | 385 | 572 | 4.80e-15 | 78.2 |
| Msa1160930 | AT1G14750.2 | 28.718 | 195 | 128 | 4 | 229 | 419 | 217 | 404 | 1.46e-14 | 75.9 |
| Msa1160930 | AT1G14750.4 | 28.718 | 195 | 127 | 5 | 229 | 419 | 217 | 403 | 8.66e-14 | 73.6 |
Find 123 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGTGAGATAAAGGGTTTC+AGG | 0.206490 | 7_4:-51071864 | None:intergenic |
| ACTCTCTTCTGAACAGGTTT+AGG | 0.234831 | 7_4:-51071227 | None:intergenic |
| GGAAATGTTGTCACACTAAA+AGG | 0.238632 | 7_4:+51070908 | Msa1160930:CDS |
| CGTAGACCACTTCTTGATAT+TGG | 0.257214 | 7_4:+51070887 | Msa1160930:CDS |
| CTCCTTGTGACAGGGCGATT+TGG | 0.266023 | 7_4:-51070944 | None:intergenic |
| CTCTCTTCTGAACAGGTTTA+GGG | 0.274182 | 7_4:-51071226 | None:intergenic |
| GTTTCAAGCTTTGTAGATAT+TGG | 0.287116 | 7_4:-51072754 | None:intergenic |
| AGCTTCAACCATTACACTTA+TGG | 0.289348 | 7_4:-51072730 | None:intergenic |
| CTATGTTGATTGTGAGATAA+AGG | 0.290156 | 7_4:-51071872 | None:intergenic |
| CAAAGCTTGAAACAATATTC+TGG | 0.318839 | 7_4:+51072764 | Msa1160930:three_prime_UTR |
| GAAATCTGTGCACAAGAAAA+AGG | 0.325466 | 7_4:+51071313 | Msa1160930:CDS |
| TGATGCATTATGCTACATTA+AGG | 0.329648 | 7_4:+51072216 | Msa1160930:CDS |
| AGTGCGTGAAGGTTTCTTCT+TGG | 0.369285 | 7_4:-51071348 | None:intergenic |
| GCAGTGACTCTCTTCTGAAC+AGG | 0.384619 | 7_4:-51071233 | None:intergenic |
| TGTAGAATGAATGAATGAAT+TGG | 0.390296 | 7_4:-51070356 | None:intergenic |
| GCTGAGGCAGCAAGCATTGA+TGG | 0.393892 | 7_4:-51072245 | None:intergenic |
| CTCATCCTCTCATTTATCTC+AGG | 0.404632 | 7_4:-51071789 | None:intergenic |
| TCAATAACTTCCACAGGCTT+AGG | 0.404728 | 7_4:-51071260 | None:intergenic |
| CAACTGTTCTTCGGAGTAAC+CGG | 0.407928 | 7_4:-51072333 | None:intergenic |
| CAGAAGAAGAACGGTGCAGC+AGG | 0.408866 | 7_4:+51070851 | Msa1160930:CDS |
| GCTCCTCCTGTTGTTGCTGA+TGG | 0.409185 | 7_4:+51071170 | Msa1160930:CDS |
| TCAATGTCAACAATCTCCTT+TGG | 0.409201 | 7_4:-51071549 | None:intergenic |
| TATGTTGATTGTGAGATAAA+GGG | 0.409760 | 7_4:-51071871 | None:intergenic |
| GGTAGCAGAAGATTCTTTGC+AGG | 0.415315 | 7_4:-51072470 | None:intergenic |
| CATCAAAGTATGAAGAAATC+TGG | 0.422694 | 7_4:+51071970 | Msa1160930:CDS |
| AGCAGTTGCTGAAAACAATA+AGG | 0.423523 | 7_4:+51071003 | Msa1160930:CDS |
| AACTGCTGCTGCTTGTGCAT+TGG | 0.426689 | 7_4:-51070987 | None:intergenic |
| TGTTGTTGTTGTTGAACAAT+GGG | 0.426966 | 7_4:-51070479 | None:intergenic |
| TTACTCCGAAGAACAGTTGA+TGG | 0.428240 | 7_4:+51072337 | Msa1160930:CDS |
| TGAAGTAAGTTCTGAAGAAA+AGG | 0.429447 | 7_4:+51071280 | Msa1160930:CDS |
| TTTCACTCTGGTGCTGAGAA+TGG | 0.430700 | 7_4:+51072383 | Msa1160930:CDS |
| GTCAAGAAGGGAACTTCAAT+TGG | 0.435390 | 7_4:+51071923 | Msa1160930:CDS |
| TCACAATCAACATAGTTGAT+AGG | 0.445143 | 7_4:+51071880 | Msa1160930:CDS |
| TGTTATAGGTGATGCTGCCT+TGG | 0.451586 | 7_4:+51070814 | Msa1160930:intron |
| GCTTGTGTCAATGTGGCTCC+TGG | 0.453366 | 7_4:+51071143 | Msa1160930:CDS |
| CAACAACAACACTTTCGTAA+TGG | 0.454511 | 7_4:+51070448 | Msa1160930:exon |
| AGAAGGGAACTTCAATTGGT+TGG | 0.459265 | 7_4:+51071927 | Msa1160930:CDS |
| CTGTTGTTTCCCTCCTCCCA+AGG | 0.460174 | 7_4:-51070831 | None:intergenic |
| GTAGAATGAATGAATGAATT+GGG | 0.461178 | 7_4:-51070355 | None:intergenic |
| GATGGATTGTGCTAGGTTGT+TGG | 0.467847 | 7_4:+51072355 | Msa1160930:CDS |
| CATTGAGCAAGACTCCTGTT+TGG | 0.470579 | 7_4:+51072288 | Msa1160930:CDS |
| GTTCTTGGTTCGTTTCATCA+AGG | 0.481189 | 7_4:+51072118 | Msa1160930:CDS |
| GGTGATGCTGCCTTGGGAGG+AGG | 0.482861 | 7_4:+51070821 | Msa1160930:intron |
| AGGAATACTCATTGATTGGC+TGG | 0.482890 | 7_4:+51071812 | Msa1160930:CDS |
| TTGAGTGTCTCATTCCAAAC+AGG | 0.483773 | 7_4:-51072302 | None:intergenic |
| TCTGCTACCTGCTGCTGTGT+AGG | 0.486159 | 7_4:+51072484 | Msa1160930:CDS |
| GTCTCCATCAGCTTCATAAG+AGG | 0.490576 | 7_4:+51070308 | Msa1160930:five_prime_UTR |
| CTGTCAACCTTGTGTCAAGA+AGG | 0.491215 | 7_4:+51071910 | Msa1160930:CDS |
| TCTGCAGTTCCTTCTGATCA+AGG | 0.494974 | 7_4:+51072152 | Msa1160930:CDS |
| TTTCACTACAACCAATTGCT+AGG | 0.495893 | 7_4:-51072638 | None:intergenic |
| TCGAAATTCCCTTGATCAGA+AGG | 0.498847 | 7_4:-51072161 | None:intergenic |
| TGAGAGGAATACTCATTGAT+TGG | 0.498998 | 7_4:+51071808 | Msa1160930:CDS |
| CTTACTTCAATAACTTCCAC+AGG | 0.506470 | 7_4:-51071266 | None:intergenic |
| GAAGAAGAACGGTGCAGCAG+GGG | 0.508581 | 7_4:+51070853 | Msa1160930:CDS |
| GCAACTCCATCAGCAACAAC+AGG | 0.508824 | 7_4:-51071176 | None:intergenic |
| TTGTTGTTGATTCTTGAGGA+TGG | 0.508958 | 7_4:-51070434 | None:intergenic |
| ATCATGGAGAAAACCATCCT+AGG | 0.509664 | 7_4:+51072056 | Msa1160930:CDS |
| ACAATCCATCAACTGTTCTT+CGG | 0.510480 | 7_4:-51072342 | None:intergenic |
| GTAAAGAATACAATAACAAA+TGG | 0.510682 | 7_4:-51072592 | None:intergenic |
| CCACTCAAGCTTCCCTAGGA+TGG | 0.512212 | 7_4:-51072069 | None:intergenic |
| ACAACAGGAGGAGCAGGTCC+AGG | 0.513085 | 7_4:-51071161 | None:intergenic |
| TCAAGGGAATTTCGAGATGA+TGG | 0.517139 | 7_4:+51072169 | Msa1160930:CDS |
| CCATCCTAGGGAAGCTTGAG+TGG | 0.520225 | 7_4:+51072069 | Msa1160930:CDS |
| AAACGAACCAAGAACACAAA+AGG | 0.522867 | 7_4:-51072110 | None:intergenic |
| CAGTAAAACCATAAGTGTAA+TGG | 0.523344 | 7_4:+51072722 | Msa1160930:three_prime_UTR |
| GTGATGCTGCCTTGGGAGGA+GGG | 0.530719 | 7_4:+51070822 | Msa1160930:CDS |
| AAGAACGGTGCAGCAGGGGA+AGG | 0.535783 | 7_4:+51070857 | Msa1160930:CDS |
| CTCAAACAAGAGTGCGTGCG+AGG | 0.537540 | 7_4:+51070381 | Msa1160930:five_prime_UTR |
| GTTATAGGTGATGCTGCCTT+GGG | 0.538221 | 7_4:+51070815 | Msa1160930:intron |
| AGCAGAAGATTCTTTGCAGG+TGG | 0.543898 | 7_4:-51072467 | None:intergenic |
| GAGAGAACCTACACAGCAGC+AGG | 0.545039 | 7_4:-51072491 | None:intergenic |
| CAATATCAAGAAGTGGTCTA+CGG | 0.545242 | 7_4:-51070886 | None:intergenic |
| TCAGCAACAACAGGAGGAGC+AGG | 0.545915 | 7_4:-51071167 | None:intergenic |
| TCATGAACAGATTCTCATCA+TGG | 0.547054 | 7_4:+51072040 | Msa1160930:CDS |
| AGTGGCTAGAAGAGTGGTGG+TGG | 0.553511 | 7_4:+51071202 | Msa1160930:CDS |
| AAGGCCTCTTATGAAGCTGA+TGG | 0.554149 | 7_4:-51070312 | None:intergenic |
| TTGACACAAGGTTGACAGCA+AGG | 0.554809 | 7_4:-51071905 | None:intergenic |
| ACGGTGCAGCAGGGGAAGGA+AGG | 0.557061 | 7_4:+51070861 | Msa1160930:CDS |
| TCATGGAGAAAACCATCCTA+GGG | 0.567407 | 7_4:+51072057 | Msa1160930:CDS |
| AGCCAAATCGCCCTGTCACA+AGG | 0.571983 | 7_4:+51070942 | Msa1160930:CDS |
| GAGATTGTTGACATTGATGC+TGG | 0.574052 | 7_4:+51071555 | Msa1160930:CDS |
| AAGTCCACTCAAGCTTCCCT+AGG | 0.574511 | 7_4:-51072073 | None:intergenic |
| TGCTGATGGAGTTGCAGCAG+TGG | 0.577732 | 7_4:+51071184 | Msa1160930:CDS |
| AACAGTTGATGGATTGTGCT+AGG | 0.577876 | 7_4:+51072348 | Msa1160930:CDS |
| TGCAGCAGTGGCTAGAAGAG+TGG | 0.581805 | 7_4:+51071196 | Msa1160930:CDS |
| CACACAAAGTCATTAACCTC+AGG | 0.586086 | 7_4:-51071996 | None:intergenic |
| AAGCCGTCCACATGATTACA+TGG | 0.589639 | 7_4:+51071758 | Msa1160930:CDS |
| CTGCAGTTCCTTCTGATCAA+GGG | 0.594453 | 7_4:+51072153 | Msa1160930:CDS |
| ATAGGTGATGCTGCCTTGGG+AGG | 0.594991 | 7_4:+51070818 | Msa1160930:intron |
| TGTCCTCACTGCTAGAAGCA+AGG | 0.595514 | 7_4:+51071379 | Msa1160930:CDS |
| GAAGTTCCCTTCTTGACACA+AGG | 0.595803 | 7_4:-51071917 | None:intergenic |
| AAGTACTCTGATCCTCAGAA+AGG | 0.596937 | 7_4:+51072428 | Msa1160930:CDS |
| GAGACACTCAAGATGCATAC+CGG | 0.598392 | 7_4:+51072314 | Msa1160930:CDS |
| CACTGCAAAACCTAAGCCTG+TGG | 0.603311 | 7_4:+51071250 | Msa1160930:CDS |
| TGGAATCAGTGCCATGCTGA+TGG | 0.608887 | 7_4:+51071947 | Msa1160930:CDS |
| GAGATAAATGAGAGGATGAG+AGG | 0.614173 | 7_4:+51071792 | Msa1160930:CDS |
| AGTGTTGTTGTTGATTCTTG+AGG | 0.614538 | 7_4:-51070438 | None:intergenic |
| TCAAACAAGAGTGCGTGCGA+GGG | 0.614570 | 7_4:+51070382 | Msa1160930:five_prime_UTR |
| ACAGAAGAAAGAGTGCGTGA+AGG | 0.617715 | 7_4:-51071359 | None:intergenic |
| CCTTGCTGCATAAACTGCTG+AGG | 0.621240 | 7_4:-51072261 | None:intergenic |
| ACCAAGAACACAAAAGGTGT+CGG | 0.622367 | 7_4:-51072104 | None:intergenic |
| AGAAGAAGAACGGTGCAGCA+GGG | 0.627002 | 7_4:+51070852 | Msa1160930:CDS |
| TCGACCGTTGAGGATAGAAA+CGG | 0.627031 | 7_4:+51070284 | None:intergenic |
| ATACTTTGATGCCATCAGCA+TGG | 0.630020 | 7_4:-51071958 | None:intergenic |
| ACAAAGTCATTAACCTCAGG+TGG | 0.630280 | 7_4:-51071993 | None:intergenic |
| ACATTTCCAATATCAAGAAG+TGG | 0.631314 | 7_4:-51070893 | None:intergenic |
| TCTCTTCTGAACAGGTTTAG+GGG | 0.638469 | 7_4:-51071225 | None:intergenic |
| TGTCAACCTTGTGTCAAGAA+GGG | 0.639776 | 7_4:+51071911 | Msa1160930:CDS |
| TGCTGAGAATGGAAAGCTGA+AGG | 0.640144 | 7_4:+51072394 | Msa1160930:CDS |
| GGGAAACAACAGAAGAAGAA+CGG | 0.643525 | 7_4:+51070842 | Msa1160930:CDS |
| GCAGCAACAGCACCTTTCTG+AGG | 0.644637 | 7_4:-51072440 | None:intergenic |
| CCTCAGCAGTTTATGCAGCA+AGG | 0.648005 | 7_4:+51072261 | Msa1160930:CDS |
| ACTCCATCAGCAACAACAGG+AGG | 0.651848 | 7_4:-51071173 | None:intergenic |
| GACTGTAAGCTCTATCTGAG+AGG | 0.659855 | 7_4:-51072019 | None:intergenic |
| CACAACCTGAGATAAATGAG+AGG | 0.662919 | 7_4:+51071784 | Msa1160930:CDS |
| TGAAGAAATCTGGCCACCTG+AGG | 0.663492 | 7_4:+51071980 | Msa1160930:CDS |
| TGGTTTGACTAACAAACCAA+AGG | 0.666669 | 7_4:+51071533 | Msa1160930:CDS |
| AGTCCATGTAATCATGTGGA+CGG | 0.674217 | 7_4:-51071761 | None:intergenic |
| CAAGTTCTACAAAATAGTTG+AGG | 0.678099 | 7_4:+51071626 | Msa1160930:CDS |
| TGTGAGTCCATGTAATCATG+TGG | 0.686546 | 7_4:-51071765 | None:intergenic |
| AGCAGTGGCTAGAAGAGTGG+TGG | 0.705939 | 7_4:+51071199 | Msa1160930:CDS |
| GAAACAAGCTTGTGTCAATG+TGG | 0.711236 | 7_4:+51071136 | Msa1160930:intron |
| AAACCTTGCTTCTAGCAGTG+AGG | 0.715110 | 7_4:-51071382 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAAGTTTCGATTTTTT+AGG | + | chr7_4:51070696-51070715 | Msa1160930:intron | 15.0% |
| !!! | TAAAAAGTTTCGATTTTTTA+GGG | + | chr7_4:51070697-51070716 | Msa1160930:intron | 15.0% |
| !!! | TTTATGGTTTTATTTATCCT+GGG | + | chr7_4:51070541-51070560 | Msa1160930:intron | 20.0% |
| !!! | CTTTTTAAGATTTATCATCT+GGG | - | chr7_4:51070684-51070703 | None:intergenic | 20.0% |
| !!! | ACTTTTTAAGATTTATCATC+TGG | - | chr7_4:51070685-51070704 | None:intergenic | 20.0% |
| !! | GTAAAGAATACAATAACAAA+TGG | - | chr7_4:51072595-51072614 | None:intergenic | 20.0% |
| ! | GTAGAATGAATGAATGAATT+GGG | - | chr7_4:51070358-51070377 | None:intergenic | 25.0% |
| ! | TGTAGAATGAATGAATGAAT+TGG | - | chr7_4:51070359-51070378 | None:intergenic | 25.0% |
| !!! | CTTCAATCATTGATTCTTTA+TGG | + | chr7_4:51070525-51070544 | Msa1160930:intron | 25.0% |
| !!! | CTTTATGGTTTTATTTATCC+TGG | + | chr7_4:51070540-51070559 | Msa1160930:intron | 25.0% |
| ! | ACTTTGAGTAAAATAGTTTC+TGG | + | chr7_4:51070590-51070609 | Msa1160930:intron | 25.0% |
| ! | CTTTGAGTAAAATAGTTTCT+GGG | + | chr7_4:51070591-51070610 | Msa1160930:intron | 25.0% |
| ! | TTTGCATCAAATCTAGTAAA+AGG | + | chr7_4:51070721-51070740 | Msa1160930:intron | 25.0% |
| ! | TTGCATCAAATCTAGTAAAA+GGG | + | chr7_4:51070722-51070741 | Msa1160930:intron | 25.0% |
| !!! | TCTTTTTTGGATTTTGTGTT+TGG | + | chr7_4:51070751-51070770 | Msa1160930:intron | 25.0% |
| !!! | TGATGATTATTTTCTGAGAT+TGG | + | chr7_4:51071087-51071106 | Msa1160930:intron | 25.0% |
| ! | AAAGAAACATGTTATGTTGT+TGG | + | chr7_4:51071442-51071461 | Msa1160930:intron | 25.0% |
| !! | TGTTCTTTTCATGTTCTTTT+AGG | + | chr7_4:51071503-51071522 | Msa1160930:intron | 25.0% |
| !! | TATGTTGATTGTGAGATAAA+GGG | - | chr7_4:51071874-51071893 | None:intergenic | 25.0% |
| !!! | TGCTTTGAAAAAATAAGCAA+AGG | + | chr7_4:51072526-51072545 | Msa1160930:three_prime_UTR | 25.0% |
| !!! | ATGAGTTTTAGGTTTTATGT+GGG | + | chr7_4:51072556-51072575 | Msa1160930:three_prime_UTR | 25.0% |
| !!! | AGATATTTTTTCCTAGCAAT+TGG | + | chr7_4:51072627-51072646 | Msa1160930:three_prime_UTR | 25.0% |
| ! | ATGTGAGAACTATAAAAATG+AGG | - | chr7_4:51072686-51072705 | None:intergenic | 25.0% |
| ATGAGAAAAACGAAGGAAAA+AGG | - | chr7_4:51070334-51070353 | None:intergenic | 30.0% | |
| ! | TGTTGTTGTTGTTGAACAAT+GGG | - | chr7_4:51070482-51070501 | None:intergenic | 30.0% |
| ! | TTGTTGTTGTTGTTGAACAA+TGG | - | chr7_4:51070483-51070502 | None:intergenic | 30.0% |
| ATTGAAAGATCTTGCAAATC+TGG | + | chr7_4:51070644-51070663 | Msa1160930:intron | 30.0% | |
| TTGAAAGATCTTGCAAATCT+GGG | + | chr7_4:51070645-51070664 | Msa1160930:intron | 30.0% | |
| !!! | AAAAGGGTCTTGTTCTTTTT+TGG | + | chr7_4:51070738-51070757 | Msa1160930:intron | 30.0% |
| CACAAACAAACATGAAAAAC+AGG | - | chr7_4:51070791-51070810 | None:intergenic | 30.0% | |
| GTTTGTTTGTGCAATGTTAT+AGG | + | chr7_4:51070800-51070819 | Msa1160930:intron | 30.0% | |
| ACATTTCCAATATCAAGAAG+TGG | - | chr7_4:51070896-51070915 | None:intergenic | 30.0% | |
| !! | TGAAGTAAGTTCTGAAGAAA+AGG | + | chr7_4:51071280-51071299 | Msa1160930:CDS | 30.0% |
| CAAGTTCTACAAAATAGTTG+AGG | + | chr7_4:51071626-51071645 | Msa1160930:CDS | 30.0% | |
| ! | CTATGTTGATTGTGAGATAA+AGG | - | chr7_4:51071875-51071894 | None:intergenic | 30.0% |
| TCACAATCAACATAGTTGAT+AGG | + | chr7_4:51071880-51071899 | Msa1160930:CDS | 30.0% | |
| CATCAAAGTATGAAGAAATC+TGG | + | chr7_4:51071970-51071989 | Msa1160930:CDS | 30.0% | |
| TGATGCATTATGCTACATTA+AGG | + | chr7_4:51072216-51072235 | Msa1160930:CDS | 30.0% | |
| !!! | CATGAGTTTTAGGTTTTATG+TGG | + | chr7_4:51072555-51072574 | Msa1160930:three_prime_UTR | 30.0% |
| CAGTAAAACCATAAGTGTAA+TGG | + | chr7_4:51072722-51072741 | Msa1160930:three_prime_UTR | 30.0% | |
| ! | GTTTCAAGCTTTGTAGATAT+TGG | - | chr7_4:51072757-51072776 | None:intergenic | 30.0% |
| CAAAGCTTGAAACAATATTC+TGG | + | chr7_4:51072764-51072783 | Msa1160930:three_prime_UTR | 30.0% | |
| ATTGGGAATGAGAAAAACGA+AGG | - | chr7_4:51070341-51070360 | None:intergenic | 35.0% | |
| !! | TTGTTGTTGATTCTTGAGGA+TGG | - | chr7_4:51070437-51070456 | None:intergenic | 35.0% |
| !! | AGTGTTGTTGTTGATTCTTG+AGG | - | chr7_4:51070441-51070460 | None:intergenic | 35.0% |
| CAACAACAACACTTTCGTAA+TGG | + | chr7_4:51070448-51070467 | Msa1160930:exon | 35.0% | |
| GAAAACACAAACAAACCTCT+GGG | - | chr7_4:51070506-51070525 | None:intergenic | 35.0% | |
| AGAAAACACAAACAAACCTC+TGG | - | chr7_4:51070507-51070526 | None:intergenic | 35.0% | |
| AGAACAAAAACATTGAACCC+AGG | - | chr7_4:51070561-51070580 | None:intergenic | 35.0% | |
| ! | GAGTAAAATAGTTTCTGGGT+TGG | + | chr7_4:51070595-51070614 | Msa1160930:intron | 35.0% |
| CAATATCAAGAAGTGGTCTA+CGG | - | chr7_4:51070889-51070908 | None:intergenic | 35.0% | |
| GGAAATGTTGTCACACTAAA+AGG | + | chr7_4:51070908-51070927 | Msa1160930:CDS | 35.0% | |
| AGCAGTTGCTGAAAACAATA+AGG | + | chr7_4:51071003-51071022 | Msa1160930:CDS | 35.0% | |
| CTTACTTCAATAACTTCCAC+AGG | - | chr7_4:51071269-51071288 | None:intergenic | 35.0% | |
| GAAATCTGTGCACAAGAAAA+AGG | + | chr7_4:51071313-51071332 | Msa1160930:CDS | 35.0% | |
| TGGTTTGACTAACAAACCAA+AGG | + | chr7_4:51071533-51071552 | Msa1160930:CDS | 35.0% | |
| TCAATGTCAACAATCTCCTT+TGG | - | chr7_4:51071552-51071571 | None:intergenic | 35.0% | |
| TGAGAGGAATACTCATTGAT+TGG | + | chr7_4:51071808-51071827 | Msa1160930:CDS | 35.0% | |
| ATTGTGAGATAAAGGGTTTC+AGG | - | chr7_4:51071867-51071886 | None:intergenic | 35.0% | |
| TCATGAACAGATTCTCATCA+TGG | + | chr7_4:51072040-51072059 | Msa1160930:CDS | 35.0% | |
| AAACGAACCAAGAACACAAA+AGG | - | chr7_4:51072113-51072132 | None:intergenic | 35.0% | |
| ACAATCCATCAACTGTTCTT+CGG | - | chr7_4:51072345-51072364 | None:intergenic | 35.0% | |
| ! | AAGGAAGTTGCATGAGTTTT+AGG | + | chr7_4:51072545-51072564 | Msa1160930:three_prime_UTR | 35.0% |
| TTTCACTACAACCAATTGCT+AGG | - | chr7_4:51072641-51072660 | None:intergenic | 35.0% | |
| AGCTTCAACCATTACACTTA+TGG | - | chr7_4:51072733-51072752 | None:intergenic | 35.0% | |
| GGGAAACAACAGAAGAAGAA+CGG | + | chr7_4:51070842-51070861 | Msa1160930:CDS | 40.0% | |
| CGTAGACCACTTCTTGATAT+TGG | + | chr7_4:51070887-51070906 | Msa1160930:CDS | 40.0% | |
| CACAAAAACTCCTTGTGACA+GGG | - | chr7_4:51070955-51070974 | None:intergenic | 40.0% | |
| GAAACAAGCTTGTGTCAATG+TGG | + | chr7_4:51071136-51071155 | Msa1160930:intron | 40.0% | |
| TCTCTTCTGAACAGGTTTAG+GGG | - | chr7_4:51071228-51071247 | None:intergenic | 40.0% | |
| CTCTCTTCTGAACAGGTTTA+GGG | - | chr7_4:51071229-51071248 | None:intergenic | 40.0% | |
| ACTCTCTTCTGAACAGGTTT+AGG | - | chr7_4:51071230-51071249 | None:intergenic | 40.0% | |
| TCAATAACTTCCACAGGCTT+AGG | - | chr7_4:51071263-51071282 | None:intergenic | 40.0% | |
| ! | ATGTTCTTTTAGGCTGCATG+TGG | + | chr7_4:51071513-51071532 | Msa1160930:intron | 40.0% |
| GAGATTGTTGACATTGATGC+TGG | + | chr7_4:51071555-51071574 | Msa1160930:CDS | 40.0% | |
| AGTCCATGTAATCATGTGGA+CGG | - | chr7_4:51071764-51071783 | None:intergenic | 40.0% | |
| TGTGAGTCCATGTAATCATG+TGG | - | chr7_4:51071768-51071787 | None:intergenic | 40.0% | |
| CACAACCTGAGATAAATGAG+AGG | + | chr7_4:51071784-51071803 | Msa1160930:CDS | 40.0% | |
| CTCATCCTCTCATTTATCTC+AGG | - | chr7_4:51071792-51071811 | None:intergenic | 40.0% | |
| GAGATAAATGAGAGGATGAG+AGG | + | chr7_4:51071792-51071811 | Msa1160930:CDS | 40.0% | |
| ! | AGGAATACTCATTGATTGGC+TGG | + | chr7_4:51071812-51071831 | Msa1160930:CDS | 40.0% |
| TGTCAACCTTGTGTCAAGAA+GGG | + | chr7_4:51071911-51071930 | Msa1160930:CDS | 40.0% | |
| GTCAAGAAGGGAACTTCAAT+TGG | + | chr7_4:51071923-51071942 | Msa1160930:CDS | 40.0% | |
| AGAAGGGAACTTCAATTGGT+TGG | + | chr7_4:51071927-51071946 | Msa1160930:CDS | 40.0% | |
| ATACTTTGATGCCATCAGCA+TGG | - | chr7_4:51071961-51071980 | None:intergenic | 40.0% | |
| ACAAAGTCATTAACCTCAGG+TGG | - | chr7_4:51071996-51072015 | None:intergenic | 40.0% | |
| CACACAAAGTCATTAACCTC+AGG | - | chr7_4:51071999-51072018 | None:intergenic | 40.0% | |
| ATCATGGAGAAAACCATCCT+AGG | + | chr7_4:51072056-51072075 | Msa1160930:CDS | 40.0% | |
| TCATGGAGAAAACCATCCTA+GGG | + | chr7_4:51072057-51072076 | Msa1160930:CDS | 40.0% | |
| ! | ACCAAGAACACAAAAGGTGT+CGG | - | chr7_4:51072107-51072126 | None:intergenic | 40.0% |
| ! | GTTCTTGGTTCGTTTCATCA+AGG | + | chr7_4:51072118-51072137 | Msa1160930:CDS | 40.0% |
| TCGAAATTCCCTTGATCAGA+AGG | - | chr7_4:51072164-51072183 | None:intergenic | 40.0% | |
| TCAAGGGAATTTCGAGATGA+TGG | + | chr7_4:51072169-51072188 | Msa1160930:CDS | 40.0% | |
| ! | GCTCATTTTCTCTCTGAGTT+GGG | + | chr7_4:51072191-51072210 | Msa1160930:CDS | 40.0% |
| TTGAGTGTCTCATTCCAAAC+AGG | - | chr7_4:51072305-51072324 | None:intergenic | 40.0% | |
| TTACTCCGAAGAACAGTTGA+TGG | + | chr7_4:51072337-51072356 | Msa1160930:CDS | 40.0% | |
| !! | AACAGTTGATGGATTGTGCT+AGG | + | chr7_4:51072348-51072367 | Msa1160930:CDS | 40.0% |
| !! | TTGTTGGTGAGTTTTCACTC+TGG | + | chr7_4:51072371-51072390 | Msa1160930:CDS | 40.0% |
| AAGTACTCTGATCCTCAGAA+AGG | + | chr7_4:51072428-51072447 | Msa1160930:CDS | 40.0% | |
| GTCTCCATCAGCTTCATAAG+AGG | + | chr7_4:51070308-51070327 | Msa1160930:five_prime_UTR | 45.0% | |
| AAGGCCTCTTATGAAGCTGA+TGG | - | chr7_4:51070315-51070334 | None:intergenic | 45.0% | |
| CAACAACAACAACAACCCAG+AGG | + | chr7_4:51070488-51070507 | Msa1160930:CDS | 45.0% | |
| TGTTATAGGTGATGCTGCCT+TGG | + | chr7_4:51070814-51070833 | Msa1160930:intron | 45.0% | |
| GTTATAGGTGATGCTGCCTT+GGG | + | chr7_4:51070815-51070834 | Msa1160930:intron | 45.0% | |
| GCACAAAAACTCCTTGTGAC+AGG | - | chr7_4:51070956-51070975 | None:intergenic | 45.0% | |
| AGTGCGTGAAGGTTTCTTCT+TGG | - | chr7_4:51071351-51071370 | None:intergenic | 45.0% | |
| ! | ACAGAAGAAAGAGTGCGTGA+AGG | - | chr7_4:51071362-51071381 | None:intergenic | 45.0% |
| AAACCTTGCTTCTAGCAGTG+AGG | - | chr7_4:51071385-51071404 | None:intergenic | 45.0% | |
| AAGCCGTCCACATGATTACA+TGG | + | chr7_4:51071758-51071777 | Msa1160930:CDS | 45.0% | |
| TTGACACAAGGTTGACAGCA+AGG | - | chr7_4:51071908-51071927 | None:intergenic | 45.0% | |
| CTGTCAACCTTGTGTCAAGA+AGG | + | chr7_4:51071910-51071929 | Msa1160930:CDS | 45.0% | |
| GAAGTTCCCTTCTTGACACA+AGG | - | chr7_4:51071920-51071939 | None:intergenic | 45.0% | |
| GACTGTAAGCTCTATCTGAG+AGG | - | chr7_4:51072022-51072041 | None:intergenic | 45.0% | |
| TCTGCAGTTCCTTCTGATCA+AGG | + | chr7_4:51072152-51072171 | Msa1160930:CDS | 45.0% | |
| CTGCAGTTCCTTCTGATCAA+GGG | + | chr7_4:51072153-51072172 | Msa1160930:CDS | 45.0% | |
| ! | GGCTCATTTTCTCTCTGAGT+TGG | + | chr7_4:51072190-51072209 | Msa1160930:CDS | 45.0% |
| CATTGAGCAAGACTCCTGTT+TGG | + | chr7_4:51072288-51072307 | Msa1160930:CDS | 45.0% | |
| GAGACACTCAAGATGCATAC+CGG | + | chr7_4:51072314-51072333 | Msa1160930:CDS | 45.0% | |
| CAACTGTTCTTCGGAGTAAC+CGG | - | chr7_4:51072336-51072355 | None:intergenic | 45.0% | |
| !! | GATGGATTGTGCTAGGTTGT+TGG | + | chr7_4:51072355-51072374 | Msa1160930:CDS | 45.0% |
| ! | TTTCACTCTGGTGCTGAGAA+TGG | + | chr7_4:51072383-51072402 | Msa1160930:CDS | 45.0% |
| TGCTGAGAATGGAAAGCTGA+AGG | + | chr7_4:51072394-51072413 | Msa1160930:CDS | 45.0% | |
| AGCAGAAGATTCTTTGCAGG+TGG | - | chr7_4:51072470-51072489 | None:intergenic | 45.0% | |
| GGTAGCAGAAGATTCTTTGC+AGG | - | chr7_4:51072473-51072492 | None:intergenic | 45.0% | |
| ! | TCAAACAAGAGTGCGTGCGA+GGG | + | chr7_4:51070382-51070401 | Msa1160930:five_prime_UTR | 50.0% |
| AGAAGAAGAACGGTGCAGCA+GGG | + | chr7_4:51070852-51070871 | Msa1160930:CDS | 50.0% | |
| ! | AACTGCTGCTGCTTGTGCAT+TGG | - | chr7_4:51070990-51071009 | None:intergenic | 50.0% |
| ACTCCATCAGCAACAACAGG+AGG | - | chr7_4:51071176-51071195 | None:intergenic | 50.0% | |
| GCAACTCCATCAGCAACAAC+AGG | - | chr7_4:51071179-51071198 | None:intergenic | 50.0% | |
| GCAGTGACTCTCTTCTGAAC+AGG | - | chr7_4:51071236-51071255 | None:intergenic | 50.0% | |
| CACTGCAAAACCTAAGCCTG+TGG | + | chr7_4:51071250-51071269 | Msa1160930:CDS | 50.0% | |
| TGTCCTCACTGCTAGAAGCA+AGG | + | chr7_4:51071379-51071398 | Msa1160930:CDS | 50.0% | |
| TGGAATCAGTGCCATGCTGA+TGG | + | chr7_4:51071947-51071966 | Msa1160930:CDS | 50.0% | |
| TGAAGAAATCTGGCCACCTG+AGG | + | chr7_4:51071980-51071999 | Msa1160930:CDS | 50.0% | |
| AAGTCCACTCAAGCTTCCCT+AGG | - | chr7_4:51072076-51072095 | None:intergenic | 50.0% | |
| ! | GCCGACACCTTTTGTGTTCT+TGG | + | chr7_4:51072103-51072122 | Msa1160930:CDS | 50.0% |
| CCTTGCTGCATAAACTGCTG+AGG | - | chr7_4:51072264-51072283 | None:intergenic | 50.0% | |
| CCTCAGCAGTTTATGCAGCA+AGG | + | chr7_4:51072261-51072280 | Msa1160930:CDS | 50.0% | |
| ! | CTCAAACAAGAGTGCGTGCG+AGG | + | chr7_4:51070381-51070400 | Msa1160930:five_prime_UTR | 55.0% |
| ATAGGTGATGCTGCCTTGGG+AGG | + | chr7_4:51070818-51070837 | Msa1160930:intron | 55.0% | |
| !! | CTGTTGTTTCCCTCCTCCCA+AGG | - | chr7_4:51070834-51070853 | None:intergenic | 55.0% |
| CAGAAGAAGAACGGTGCAGC+AGG | + | chr7_4:51070851-51070870 | Msa1160930:CDS | 55.0% | |
| GAAGAAGAACGGTGCAGCAG+GGG | + | chr7_4:51070853-51070872 | Msa1160930:CDS | 55.0% | |
| AGCCAAATCGCCCTGTCACA+AGG | + | chr7_4:51070942-51070961 | Msa1160930:CDS | 55.0% | |
| CTCCTTGTGACAGGGCGATT+TGG | - | chr7_4:51070947-51070966 | None:intergenic | 55.0% | |
| GCTTGTGTCAATGTGGCTCC+TGG | + | chr7_4:51071143-51071162 | Msa1160930:CDS | 55.0% | |
| TCAGCAACAACAGGAGGAGC+AGG | - | chr7_4:51071170-51071189 | None:intergenic | 55.0% | |
| GCTCCTCCTGTTGTTGCTGA+TGG | + | chr7_4:51071170-51071189 | Msa1160930:CDS | 55.0% | |
| TGCTGATGGAGTTGCAGCAG+TGG | + | chr7_4:51071184-51071203 | Msa1160930:CDS | 55.0% | |
| TGCAGCAGTGGCTAGAAGAG+TGG | + | chr7_4:51071196-51071215 | Msa1160930:CDS | 55.0% | |
| AGCAGTGGCTAGAAGAGTGG+TGG | + | chr7_4:51071199-51071218 | Msa1160930:CDS | 55.0% | |
| AGTGGCTAGAAGAGTGGTGG+TGG | + | chr7_4:51071202-51071221 | Msa1160930:CDS | 55.0% | |
| CCACTCAAGCTTCCCTAGGA+TGG | - | chr7_4:51072072-51072091 | None:intergenic | 55.0% | |
| CCATCCTAGGGAAGCTTGAG+TGG | + | chr7_4:51072069-51072088 | Msa1160930:CDS | 55.0% | |
| !! | GCTGAGGCAGCAAGCATTGA+TGG | - | chr7_4:51072248-51072267 | None:intergenic | 55.0% |
| GCAGCAACAGCACCTTTCTG+AGG | - | chr7_4:51072443-51072462 | None:intergenic | 55.0% | |
| TCTGCTACCTGCTGCTGTGT+AGG | + | chr7_4:51072484-51072503 | Msa1160930:CDS | 55.0% | |
| GAGAGAACCTACACAGCAGC+AGG | - | chr7_4:51072494-51072513 | None:intergenic | 55.0% | |
| GTGATGCTGCCTTGGGAGGA+GGG | + | chr7_4:51070822-51070841 | Msa1160930:CDS | 60.0% | |
| AAGAACGGTGCAGCAGGGGA+AGG | + | chr7_4:51070857-51070876 | Msa1160930:CDS | 60.0% | |
| ACAACAGGAGGAGCAGGTCC+AGG | - | chr7_4:51071164-51071183 | None:intergenic | 60.0% | |
| GGTGATGCTGCCTTGGGAGG+AGG | + | chr7_4:51070821-51070840 | Msa1160930:intron | 65.0% | |
| ACGGTGCAGCAGGGGAAGGA+AGG | + | chr7_4:51070861-51070880 | Msa1160930:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 51070298 | 51072815 | 51070298 | ID=Msa1160930;Name=Msa1160930 |
| chr7_4 | mRNA | 51070298 | 51072815 | 51070298 | ID=Msa1160930-mRNA-1;Parent=Msa1160930;Name=Msa1160930-mRNA-1;_AED=0.35;_eAED=0.35;_QI=169|1|1|1|1|1|5|310|461 |
| chr7_4 | exon | 51070298 | 51070509 | 51070298 | ID=Msa1160930-mRNA-1:exon:14351;Parent=Msa1160930-mRNA-1 |
| chr7_4 | exon | 51070822 | 51071024 | 51070822 | ID=Msa1160930-mRNA-1:exon:14352;Parent=Msa1160930-mRNA-1 |
| chr7_4 | exon | 51071137 | 51071400 | 51071137 | ID=Msa1160930-mRNA-1:exon:14353;Parent=Msa1160930-mRNA-1 |
| chr7_4 | exon | 51071525 | 51071647 | 51071525 | ID=Msa1160930-mRNA-1:exon:14354;Parent=Msa1160930-mRNA-1 |
| chr7_4 | exon | 51071753 | 51072815 | 51071753 | ID=Msa1160930-mRNA-1:exon:14355;Parent=Msa1160930-mRNA-1 |
| chr7_4 | five_prime_UTR | 51070298 | 51070466 | 51070298 | ID=Msa1160930-mRNA-1:five_prime_utr;Parent=Msa1160930-mRNA-1 |
| chr7_4 | CDS | 51070467 | 51070509 | 51070467 | ID=Msa1160930-mRNA-1:cds;Parent=Msa1160930-mRNA-1 |
| chr7_4 | CDS | 51070822 | 51071024 | 51070822 | ID=Msa1160930-mRNA-1:cds;Parent=Msa1160930-mRNA-1 |
| chr7_4 | CDS | 51071137 | 51071400 | 51071137 | ID=Msa1160930-mRNA-1:cds;Parent=Msa1160930-mRNA-1 |
| chr7_4 | CDS | 51071525 | 51071647 | 51071525 | ID=Msa1160930-mRNA-1:cds;Parent=Msa1160930-mRNA-1 |
| chr7_4 | CDS | 51071753 | 51072505 | 51071753 | ID=Msa1160930-mRNA-1:cds;Parent=Msa1160930-mRNA-1 |
| chr7_4 | three_prime_UTR | 51072506 | 51072815 | 51072506 | ID=Msa1160930-mRNA-1:three_prime_utr;Parent=Msa1160930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
