Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1105540 | XP_003622996.1 | 98.423 | 444 | 7 | 0 | 1 | 444 | 1 | 444 | 0.0 | 913 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1105540 | sp|Q944R1|PLY15_ARATH | 75.524 | 429 | 95 | 4 | 26 | 444 | 42 | 470 | 0.0 | 681 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1105540 | G7L2D3 | 98.423 | 444 | 7 | 0 | 1 | 444 | 1 | 444 | 0.0 | 913 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004590 | Msa1105540 | 0.843400 | 1.433891e-58 | -8.615850e-47 |
Msa0006840 | Msa1105540 | 0.889328 | 2.673641e-73 | -8.615850e-47 |
Msa0013410 | Msa1105540 | 0.800518 | 1.388412e-48 | -8.615850e-47 |
Msa0030070 | Msa1105540 | 0.813400 | 2.608851e-51 | -8.615850e-47 |
Msa0032130 | Msa1105540 | 0.828829 | 7.233979e-55 | -8.615850e-47 |
Msa0032390 | Msa1105540 | 0.819210 | 1.309299e-52 | -8.615850e-47 |
Msa0036810 | Msa1105540 | 0.833922 | 4.037154e-56 | -8.615850e-47 |
Msa0037660 | Msa1105540 | 0.804735 | 1.872691e-49 | -8.615850e-47 |
Msa0040200 | Msa1105540 | 0.801808 | 7.560749e-49 | -8.615850e-47 |
Msa0045620 | Msa1105540 | 0.879061 | 1.693711e-69 | -8.615850e-47 |
Msa0049450 | Msa1105540 | 0.808449 | 3.080402e-50 | -8.615850e-47 |
Msa0050530 | Msa1105540 | 0.884124 | 2.507071e-71 | -8.615850e-47 |
Msa0057860 | Msa1105540 | 0.835916 | 1.270267e-56 | -8.615850e-47 |
Msa0058130 | Msa1105540 | 0.805655 | 1.202081e-49 | -8.615850e-47 |
Msa0063190 | Msa1105540 | 0.823599 | 1.270142e-53 | -8.615850e-47 |
Msa0075840 | Msa1105540 | 0.829184 | 5.931354e-55 | -8.615850e-47 |
Msa0079410 | Msa1105540 | 0.832616 | 8.539726e-56 | -8.615850e-47 |
Msa0080370 | Msa1105540 | 0.820898 | 5.376635e-53 | -8.615850e-47 |
Msa0080440 | Msa1105540 | 0.825781 | 3.886825e-54 | -8.615850e-47 |
Msa0084990 | Msa1105540 | 0.807303 | 5.399699e-50 | -8.615850e-47 |
Msa0091350 | Msa1105540 | 0.812704 | 3.707791e-51 | -8.615850e-47 |
Msa0094180 | Msa1105540 | 0.829873 | 4.034743e-55 | -8.615850e-47 |
Msa0100600 | Msa1105540 | 0.854810 | 9.602719e-62 | -8.615850e-47 |
Msa0100890 | Msa1105540 | 0.874301 | 7.518696e-68 | -8.615850e-47 |
Msa0102920 | Msa1105540 | 0.840242 | 9.785106e-58 | -8.615850e-47 |
Msa0104570 | Msa1105540 | 0.820403 | 6.986345e-53 | -8.615850e-47 |
Msa0605520 | Msa1105540 | 0.827339 | 1.652734e-54 | -8.615850e-47 |
Msa0618840 | Msa1105540 | 0.817358 | 3.436712e-52 | -8.615850e-47 |
Msa0618990 | Msa1105540 | 0.818891 | 1.546642e-52 | -8.615850e-47 |
Msa0623310 | Msa1105540 | 0.868746 | 5.191934e-66 | -8.615850e-47 |
Msa0626980 | Msa1105540 | 0.851976 | 6.248625e-61 | -8.615850e-47 |
Msa0627360 | Msa1105540 | 0.854613 | 1.095308e-61 | -8.615850e-47 |
Msa0646260 | Msa1105540 | 0.825853 | 3.736857e-54 | -8.615850e-47 |
Msa0647440 | Msa1105540 | 0.822108 | 2.825866e-53 | -8.615850e-47 |
Msa0657210 | Msa1105540 | 0.800970 | 1.122607e-48 | -8.615850e-47 |
Msa0663290 | Msa1105540 | 0.844996 | 5.348370e-59 | -8.615850e-47 |
Msa0664070 | Msa1105540 | 0.847270 | 1.285981e-59 | -8.615850e-47 |
Msa0672420 | Msa1105540 | 0.813149 | 2.961805e-51 | -8.615850e-47 |
Msa0673940 | Msa1105540 | 0.866919 | 2.003845e-65 | -8.615850e-47 |
Msa0676200 | Msa1105540 | 0.829384 | 5.306506e-55 | -8.615850e-47 |
Msa0684750 | Msa1105540 | 0.830340 | 3.103438e-55 | -8.615850e-47 |
Msa0687370 | Msa1105540 | 0.873815 | 1.097125e-67 | -8.615850e-47 |
Msa0688380 | Msa1105540 | 0.802843 | 4.628041e-49 | -8.615850e-47 |
Msa0688620 | Msa1105540 | 0.817950 | 2.527939e-52 | -8.615850e-47 |
Msa0689830 | Msa1105540 | 0.831696 | 1.441635e-55 | -8.615850e-47 |
Msa0690320 | Msa1105540 | 0.815129 | 1.082803e-51 | -8.615850e-47 |
Msa0695560 | Msa1105540 | 0.803080 | 4.134787e-49 | -8.615850e-47 |
Msa0701250 | Msa1105540 | 0.804506 | 2.090921e-49 | -8.615850e-47 |
Msa0705140 | Msa1105540 | 0.821129 | 4.757840e-53 | -8.615850e-47 |
Msa0705180 | Msa1105540 | 0.802930 | 4.440726e-49 | -8.615850e-47 |
Msa0707260 | Msa1105540 | 0.819957 | 8.841944e-53 | -8.615850e-47 |
Msa0708020 | Msa1105540 | 0.818657 | 1.748209e-52 | -8.615850e-47 |
Msa0708980 | Msa1105540 | 0.823050 | 1.706404e-53 | -8.615850e-47 |
Msa0715510 | Msa1105540 | 0.815646 | 8.308529e-52 | -8.615850e-47 |
Msa0716700 | Msa1105540 | 0.815477 | 9.061626e-52 | -8.615850e-47 |
Msa0720280 | Msa1105540 | 0.806972 | 6.344885e-50 | -8.615850e-47 |
Msa0722700 | Msa1105540 | 0.816668 | 4.910645e-52 | -8.615850e-47 |
Msa0732970 | Msa1105540 | 0.827225 | 1.759676e-54 | -8.615850e-47 |
Msa0749190 | Msa1105540 | 0.819846 | 9.372829e-53 | -8.615850e-47 |
Msa0750520 | Msa1105540 | 0.824258 | 8.897692e-54 | -8.615850e-47 |
Msa0751720 | Msa1105540 | 0.864376 | 1.271216e-64 | -8.615850e-47 |
Msa0761830 | Msa1105540 | 0.816065 | 6.699613e-52 | -8.615850e-47 |
Msa0764770 | Msa1105540 | 0.877241 | 7.358210e-69 | -8.615850e-47 |
Msa0771910 | Msa1105540 | 0.828407 | 9.147481e-55 | -8.615850e-47 |
Msa0773960 | Msa1105540 | 0.814448 | 1.532639e-51 | -8.615850e-47 |
Msa0790330 | Msa1105540 | 0.807330 | 5.329169e-50 | -8.615850e-47 |
Msa0799170 | Msa1105540 | 0.835552 | 1.569951e-56 | -8.615850e-47 |
Msa0803140 | Msa1105540 | 0.812998 | 3.196723e-51 | -8.615850e-47 |
Msa0804170 | Msa1105540 | 0.818217 | 2.199854e-52 | -8.615850e-47 |
Msa0810080 | Msa1105540 | 0.823309 | 1.484748e-53 | -8.615850e-47 |
Msa0831820 | Msa1105540 | 0.880429 | 5.527674e-70 | -8.615850e-47 |
Msa0835750 | Msa1105540 | 0.802047 | 6.752473e-49 | -8.615850e-47 |
Msa0837610 | Msa1105540 | 0.830756 | 2.454368e-55 | -8.615850e-47 |
Msa0837680 | Msa1105540 | 0.830032 | 3.690810e-55 | -8.615850e-47 |
Msa0841500 | Msa1105540 | 0.816642 | 4.977687e-52 | -8.615850e-47 |
Msa0125590 | Msa1105540 | 0.817458 | 3.263872e-52 | -8.615850e-47 |
Msa0126130 | Msa1105540 | 0.800892 | 1.164181e-48 | -8.615850e-47 |
Msa0127340 | Msa1105540 | 0.811852 | 5.689503e-51 | -8.615850e-47 |
Msa0131810 | Msa1105540 | 0.818817 | 1.607962e-52 | -8.615850e-47 |
Msa0136690 | Msa1105540 | 0.800565 | 1.357790e-48 | -8.615850e-47 |
Msa0147680 | Msa1105540 | 0.851785 | 7.079574e-61 | -8.615850e-47 |
Msa0158760 | Msa1105540 | 0.801268 | 9.757123e-49 | -8.615850e-47 |
Msa0168380 | Msa1105540 | 0.837367 | 5.419893e-57 | -8.615850e-47 |
Msa0185690 | Msa1105540 | 0.830926 | 2.230006e-55 | -8.615850e-47 |
Msa0186180 | Msa1105540 | 0.801355 | 9.363192e-49 | -8.615850e-47 |
Msa0186560 | Msa1105540 | 0.842152 | 3.078611e-58 | -8.615850e-47 |
Msa0204970 | Msa1105540 | 0.854412 | 1.252751e-61 | -8.615850e-47 |
Msa0206370 | Msa1105540 | 0.840133 | 1.044518e-57 | -8.615850e-47 |
Msa0219840 | Msa1105540 | 0.812932 | 3.304936e-51 | -8.615850e-47 |
Msa0225800 | Msa1105540 | 0.834236 | 3.368155e-56 | -8.615850e-47 |
Msa0235080 | Msa1105540 | 0.807371 | 5.221559e-50 | -8.615850e-47 |
Msa0372100 | Msa1105540 | 0.826514 | 2.601411e-54 | -8.615850e-47 |
Msa0373170 | Msa1105540 | 0.801753 | 7.758939e-49 | -8.615850e-47 |
Msa0383940 | Msa1105540 | 0.815139 | 1.077571e-51 | -8.615850e-47 |
Msa0385730 | Msa1105540 | 0.847098 | 1.433577e-59 | -8.615850e-47 |
Msa0387890 | Msa1105540 | 0.832976 | 6.951955e-56 | -8.615850e-47 |
Msa0388250 | Msa1105540 | 0.804597 | 2.001654e-49 | -8.615850e-47 |
Msa0388620 | Msa1105540 | 0.833556 | 4.982778e-56 | -8.615850e-47 |
Msa0401060 | Msa1105540 | 0.805668 | 1.194582e-49 | -8.615850e-47 |
Msa0416210 | Msa1105540 | 0.819377 | 1.199080e-52 | -8.615850e-47 |
Msa0420430 | Msa1105540 | 0.810390 | 1.180546e-50 | -8.615850e-47 |
Msa0421290 | Msa1105540 | 0.819221 | 1.301769e-52 | -8.615850e-47 |
Msa0421750 | Msa1105540 | 0.809857 | 1.538023e-50 | -8.615850e-47 |
Msa0422820 | Msa1105540 | 0.805937 | 1.048681e-49 | -8.615850e-47 |
Msa0422900 | Msa1105540 | 0.802091 | 6.613594e-49 | -8.615850e-47 |
Msa0427820 | Msa1105540 | 0.801461 | 8.905121e-49 | -8.615850e-47 |
Msa0429970 | Msa1105540 | 0.810315 | 1.225266e-50 | -8.615850e-47 |
Msa0432200 | Msa1105540 | 0.823388 | 1.422792e-53 | -8.615850e-47 |
Msa0433630 | Msa1105540 | 0.851520 | 8.415734e-61 | -8.615850e-47 |
Msa0434360 | Msa1105540 | 0.811246 | 7.706671e-51 | -8.615850e-47 |
Msa0436100 | Msa1105540 | 0.813731 | 2.206085e-51 | -8.615850e-47 |
Msa0447870 | Msa1105540 | 0.801121 | 1.045469e-48 | -8.615850e-47 |
Msa0458100 | Msa1105540 | 0.811819 | 5.786338e-51 | -8.615850e-47 |
Msa0467250 | Msa1105540 | 0.823998 | 1.024156e-53 | -8.615850e-47 |
Msa0467690 | Msa1105540 | 0.805443 | 1.331550e-49 | -8.615850e-47 |
Msa0469060 | Msa1105540 | 0.809469 | 1.863251e-50 | -8.615850e-47 |
Msa0477480 | Msa1105540 | 0.833638 | 4.755104e-56 | -8.615850e-47 |
Msa0982960 | Msa1105540 | 0.804360 | 2.242678e-49 | -8.615850e-47 |
Msa0999950 | Msa1105540 | 0.807358 | 5.256700e-50 | -8.615850e-47 |
Msa1000780 | Msa1105540 | 0.800164 | 1.639050e-48 | -8.615850e-47 |
Msa1008850 | Msa1105540 | 0.858290 | 9.119428e-63 | -8.615850e-47 |
Msa1021560 | Msa1105540 | 0.970605 | 7.163567e-132 | -8.615850e-47 |
Msa1033420 | Msa1105540 | 0.832890 | 7.300832e-56 | -8.615850e-47 |
Msa1041370 | Msa1105540 | 0.829970 | 3.820061e-55 | -8.615850e-47 |
Msa1050260 | Msa1105540 | 0.829976 | 3.807844e-55 | -8.615850e-47 |
Msa1060300 | Msa1105540 | 0.905204 | 5.496519e-80 | -8.615850e-47 |
Msa1071410 | Msa1105540 | 0.824917 | 6.224528e-54 | -8.615850e-47 |
Msa1073060 | Msa1105540 | 0.826182 | 3.121859e-54 | -8.615850e-47 |
Msa1078080 | Msa1105540 | 0.809264 | 2.062388e-50 | -8.615850e-47 |
Msa1078300 | Msa1105540 | 0.810133 | 1.340884e-50 | -8.615850e-47 |
Msa1081270 | Msa1105540 | 0.823896 | 1.082179e-53 | -8.615850e-47 |
Msa1083630 | Msa1105540 | 0.808129 | 3.603596e-50 | -8.615850e-47 |
Msa1085560 | Msa1105540 | 0.813036 | 3.136969e-51 | -8.615850e-47 |
Msa1085680 | Msa1105540 | 0.898285 | 6.161895e-77 | -8.615850e-47 |
Msa1088260 | Msa1105540 | 0.818602 | 1.799621e-52 | -8.615850e-47 |
Msa1105540 | Msa1105580 | 0.974708 | 1.238832e-138 | -8.615850e-47 |
Msa1105540 | Msa1106220 | 0.811225 | 7.787363e-51 | -8.615850e-47 |
Msa1105540 | Msa1124210 | 0.821207 | 4.563825e-53 | -8.615850e-47 |
Msa1105540 | Msa1128620 | 0.829858 | 4.068789e-55 | -8.615850e-47 |
Msa1105540 | Msa1130770 | 0.825012 | 5.910574e-54 | -8.615850e-47 |
Msa1105540 | Msa1138800 | 0.825747 | 3.959610e-54 | -8.615850e-47 |
Msa1105540 | Msa1144990 | 0.867101 | 1.753885e-65 | -8.615850e-47 |
Msa1105540 | Msa1147560 | 0.823399 | 1.414525e-53 | -8.615850e-47 |
Msa1105540 | Msa1148930 | 0.947702 | 4.021547e-106 | -8.615850e-47 |
Msa1105540 | Msa1160930 | 0.806456 | 8.155355e-50 | -8.615850e-47 |
Msa1105540 | Msa1162360 | 0.833864 | 4.174735e-56 | -8.615850e-47 |
Msa1105540 | Msa1168310 | 0.800938 | 1.139665e-48 | -8.615850e-47 |
Msa1105540 | Msa1180840 | 0.851581 | 8.085736e-61 | -8.615850e-47 |
Msa1105540 | Msa1188340 | 0.828841 | 7.185154e-55 | -8.615850e-47 |
Msa1105540 | Msa1188930 | 0.806765 | 7.017794e-50 | -8.615850e-47 |
Msa1105540 | Msa1191550 | 0.818550 | 1.848791e-52 | -8.615850e-47 |
Msa1105540 | Msa1206040 | 0.819081 | 1.400648e-52 | -8.615850e-47 |
Msa1105540 | Msa1217890 | 0.826558 | 2.540498e-54 | -8.615850e-47 |
Msa1105540 | Msa1220580 | 0.812897 | 3.363570e-51 | -8.615850e-47 |
Msa1105540 | Msa1220720 | 0.834543 | 2.820005e-56 | -8.615850e-47 |
Msa1105540 | Msa1226370 | 0.809356 | 1.970152e-50 | -8.615850e-47 |
Msa1105540 | Msa1227760 | 0.836139 | 1.114687e-56 | -8.615850e-47 |
Msa1105540 | Msa1231490 | 0.850827 | 1.319786e-60 | -8.615850e-47 |
Msa1105540 | Msa1240940 | 0.839087 | 1.953915e-57 | -8.615850e-47 |
Msa1105540 | Msa1255710 | 0.830972 | 2.172402e-55 | -8.615850e-47 |
Msa1105540 | Msa1265570 | 0.837216 | 5.924043e-57 | -8.615850e-47 |
Msa1105540 | Msa1267930 | 0.803797 | 2.936680e-49 | -8.615850e-47 |
Msa1105540 | Msa1270840 | 0.814012 | 1.912976e-51 | -8.615850e-47 |
Msa1105540 | Msa1278030 | 0.844408 | 7.700110e-59 | -8.615850e-47 |
Msa1105540 | Msa1281370 | 0.809622 | 1.727632e-50 | -8.615850e-47 |
Msa1105540 | Msa1282300 | 0.848688 | 5.224499e-60 | -8.615850e-47 |
Msa1105540 | Msa1288970 | -0.811534 | 6.671568e-51 | -8.615850e-47 |
Msa1105540 | Msa1294790 | 0.819033 | 1.436208e-52 | -8.615850e-47 |
Msa1105540 | Msa1296860 | 0.836559 | 8.716839e-57 | -8.615850e-47 |
Msa1105540 | Msa1297070 | 0.809959 | 1.461967e-50 | -8.615850e-47 |
Msa1105540 | Msa1312240 | 0.810568 | 1.080483e-50 | -8.615850e-47 |
Msa1105540 | Msa1328280 | 0.819175 | 1.333012e-52 | -8.615850e-47 |
Msa1105540 | Msa1328870 | 0.811233 | 7.756307e-51 | -8.615850e-47 |
Msa1105540 | Msa1334560 | 0.815547 | 8.743546e-52 | -8.615850e-47 |
Msa1105540 | Msa1334670 | 0.838801 | 2.317816e-57 | -8.615850e-47 |
Msa1105540 | Msa1342760 | 0.836836 | 7.409609e-57 | -8.615850e-47 |
Msa1105540 | Msa1361680 | 0.815866 | 7.423416e-52 | -8.615850e-47 |
Msa1105540 | Msa1362590 | 0.836350 | 9.854962e-57 | -8.615850e-47 |
Msa1105540 | Msa1363690 | 0.805773 | 1.135186e-49 | -8.615850e-47 |
Msa1105540 | Msa1365230 | 0.839585 | 1.450942e-57 | -8.615850e-47 |
Msa1105540 | Msa1368170 | 0.840902 | 6.571312e-58 | -8.615850e-47 |
Msa1105540 | Msa1369410 | 0.816358 | 5.762637e-52 | -8.615850e-47 |
Msa1105540 | Msa1371800 | 0.872868 | 2.284615e-67 | -8.615850e-47 |
Msa1105540 | Msa1372030 | 0.878385 | 2.931749e-69 | -8.615850e-47 |
Msa1105540 | Msa1376310 | 0.870831 | 1.083799e-66 | -8.615850e-47 |
Msa1105540 | Msa1378400 | 0.801666 | 8.083416e-49 | -8.615850e-47 |
Msa1105540 | Msa1379940 | 0.803476 | 3.423686e-49 | -8.615850e-47 |
Msa1105540 | Msa1381800 | 0.819827 | 9.466423e-53 | -8.615850e-47 |
Msa1105540 | Msa1385570 | 0.872733 | 2.534242e-67 | -8.615850e-47 |
Msa1105540 | Msa1389310 | 0.829897 | 3.980614e-55 | -8.615850e-47 |
Msa1105540 | Msa1389820 | 0.824982 | 6.009629e-54 | -8.615850e-47 |
Msa1105540 | Msa1393560 | 0.807796 | 4.243999e-50 | -8.615850e-47 |
Msa1105540 | Msa1396550 | 0.813770 | 2.162827e-51 | -8.615850e-47 |
Msa1105540 | Msa1398490 | 0.831072 | 2.053647e-55 | -8.615850e-47 |
Msa1105540 | Msa1413020 | 0.818531 | 1.867280e-52 | -8.615850e-47 |
Msa1105540 | Msa1420830 | 0.843650 | 1.229890e-58 | -8.615850e-47 |
Msa1105540 | Msa1421540 | 0.801243 | 9.870184e-49 | -8.615850e-47 |
Msa1105540 | Msa1424370 | 0.808313 | 3.292545e-50 | -8.615850e-47 |
Msa1105540 | Msa1431520 | 0.818311 | 2.094716e-52 | -8.615850e-47 |
Msa1105540 | Msa1434700 | 0.812589 | 3.930105e-51 | -8.615850e-47 |
Msa1105540 | Msa1438510 | 0.832262 | 1.044805e-55 | -8.615850e-47 |
Msa1105540 | Msa1439920 | 0.820739 | 5.850340e-53 | -8.615850e-47 |
Msa1105540 | Msa1447900 | 0.832125 | 1.130087e-55 | -8.615850e-47 |
Msa1105540 | Msa1454410 | 0.800617 | 1.325042e-48 | -8.615850e-47 |
Msa1105540 | Msa1460970 | 0.869090 | 4.017266e-66 | -8.615850e-47 |
Msa1105540 | Msa1462780 | 0.806402 | 8.370950e-50 | -8.615850e-47 |
Msa0241040 | Msa1105540 | 0.835247 | 1.874973e-56 | -8.615850e-47 |
Msa0249870 | Msa1105540 | 0.845393 | 4.177367e-59 | -8.615850e-47 |
Msa0260570 | Msa1105540 | 0.836022 | 1.193912e-56 | -8.615850e-47 |
Msa0260630 | Msa1105540 | 0.828568 | 8.363997e-55 | -8.615850e-47 |
Msa0260980 | Msa1105540 | 0.861694 | 8.566973e-64 | -8.615850e-47 |
Msa0276730 | Msa1105540 | 0.817973 | 2.497425e-52 | -8.615850e-47 |
Msa0278840 | Msa1105540 | 0.826807 | 2.215469e-54 | -8.615850e-47 |
Msa0279000 | Msa1105540 | 0.831183 | 1.928745e-55 | -8.615850e-47 |
Msa0281540 | Msa1105540 | 0.829585 | 4.740958e-55 | -8.615850e-47 |
Msa0288400 | Msa1105540 | 0.813156 | 2.951639e-51 | -8.615850e-47 |
Msa0316630 | Msa1105540 | 0.823711 | 1.195410e-53 | -8.615850e-47 |
Msa0320580 | Msa1105540 | 0.826564 | 2.531209e-54 | -8.615850e-47 |
Msa0336430 | Msa1105540 | 0.858419 | 8.347144e-63 | -8.615850e-47 |
Msa0336460 | Msa1105540 | 0.834628 | 2.684922e-56 | -8.615850e-47 |
Msa0336520 | Msa1105540 | 0.874078 | 8.946399e-68 | -8.615850e-47 |
Msa0342220 | Msa1105540 | 0.821187 | 4.614114e-53 | -8.615850e-47 |
Msa0344110 | Msa1105540 | 0.831571 | 1.548301e-55 | -8.615850e-47 |
Msa0514020 | Msa1105540 | 0.820103 | 8.185670e-53 | -8.615850e-47 |
Msa0521060 | Msa1105540 | 0.832838 | 7.521766e-56 | -8.615850e-47 |
Msa0521510 | Msa1105540 | 0.835765 | 1.387047e-56 | -8.615850e-47 |
Msa0521530 | Msa1105540 | 0.837859 | 4.054356e-57 | -8.615850e-47 |
Msa0527850 | Msa1105540 | 0.830817 | 2.372006e-55 | -8.615850e-47 |
Msa0530660 | Msa1105540 | 0.853333 | 2.562051e-61 | -8.615850e-47 |
Msa0541740 | Msa1105540 | 0.807141 | 5.843146e-50 | -8.615850e-47 |
Msa0544410 | Msa1105540 | 0.817811 | 2.716602e-52 | -8.615850e-47 |
Msa0544430 | Msa1105540 | 0.813335 | 2.696156e-51 | -8.615850e-47 |
Msa0549870 | Msa1105540 | 0.803889 | 2.810679e-49 | -8.615850e-47 |
Msa0552570 | Msa1105540 | 0.843811 | 1.113571e-58 | -8.615850e-47 |
Msa0554300 | Msa1105540 | 0.807588 | 4.697053e-50 | -8.615850e-47 |
Msa0560570 | Msa1105540 | 0.819651 | 1.038343e-52 | -8.615850e-47 |
Msa0566460 | Msa1105540 | 0.810687 | 1.018179e-50 | -8.615850e-47 |
Msa0571350 | Msa1105540 | 0.827269 | 1.717399e-54 | -8.615850e-47 |
Msa0572830 | Msa1105540 | 0.834185 | 3.469802e-56 | -8.615850e-47 |
Msa0574660 | Msa1105540 | 0.863055 | 3.269808e-64 | -8.615850e-47 |
Msa0575950 | Msa1105540 | 0.818282 | 2.125912e-52 | -8.615850e-47 |
Msa0576330 | Msa1105540 | 0.895864 | 6.389960e-76 | -8.615850e-47 |
Msa0582460 | Msa1105540 | 0.831294 | 1.810682e-55 | -8.615850e-47 |
Msa0584530 | Msa1105540 | 0.800556 | 1.363296e-48 | -8.615850e-47 |
Msa0584970 | Msa1105540 | 0.818466 | 1.931898e-52 | -8.615850e-47 |
Msa0586200 | Msa1105540 | 0.820324 | 7.286195e-53 | -8.615850e-47 |
Msa0587180 | Msa1105540 | 0.861948 | 7.163213e-64 | -8.615850e-47 |
Msa0844400 | Msa1105540 | 0.842267 | 2.870444e-58 | -8.615850e-47 |
Msa0846900 | Msa1105540 | 0.866298 | 3.157706e-65 | -8.615850e-47 |
Msa0850600 | Msa1105540 | 0.824604 | 7.377264e-54 | -8.615850e-47 |
Msa0856610 | Msa1105540 | 0.825723 | 4.012246e-54 | -8.615850e-47 |
Msa0861440 | Msa1105540 | 0.810707 | 1.008325e-50 | -8.615850e-47 |
Msa0870020 | Msa1105540 | 0.811362 | 7.270386e-51 | -8.615850e-47 |
Msa0874730 | Msa1105540 | 0.801468 | 8.877871e-49 | -8.615850e-47 |
Msa0876630 | Msa1105540 | 0.834407 | 3.051886e-56 | -8.615850e-47 |
Msa0900090 | Msa1105540 | 0.822418 | 2.394356e-53 | -8.615850e-47 |
Msa0926310 | Msa1105540 | 0.800544 | 1.371281e-48 | -8.615850e-47 |
Msa0926760 | Msa1105540 | 0.850766 | 1.372930e-60 | -8.615850e-47 |
Msa0929900 | Msa1105540 | 0.871694 | 5.623589e-67 | -8.615850e-47 |
Msa0945900 | Msa1105540 | 0.825553 | 4.402499e-54 | -8.615850e-47 |
Msa0965470 | Msa1105540 | 0.810846 | 9.408903e-51 | -8.615850e-47 |
Msa0966830 | Msa1105540 | 0.811860 | 5.666788e-51 | -8.615850e-47 |
Msa0976380 | Msa1105540 | 0.808975 | 2.378477e-50 | -8.615850e-47 |
Msa0978980 | Msa1105540 | 0.821631 | 3.643756e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1105540 | MtrunA17_Chr7g0237761 | 98.423 | 444 | 7 | 0 | 1 | 444 | 1 | 444 | 0.0 | 913 |
Msa1105540 | MtrunA17_Chr1g0169731 | 76.233 | 446 | 99 | 5 | 6 | 444 | 5 | 450 | 0.0 | 687 |
Msa1105540 | MtrunA17_Chr4g0058051 | 71.728 | 382 | 107 | 1 | 64 | 444 | 26 | 407 | 0.0 | 581 |
Msa1105540 | MtrunA17_Chr6g0458201 | 65.803 | 386 | 132 | 0 | 59 | 444 | 19 | 404 | 0.0 | 563 |
Msa1105540 | MtrunA17_Chr3g0116521 | 70.466 | 386 | 114 | 0 | 59 | 444 | 21 | 406 | 0.0 | 556 |
Msa1105540 | MtrunA17_Chr3g0123321 | 69.171 | 386 | 116 | 2 | 59 | 444 | 21 | 403 | 0.0 | 531 |
Msa1105540 | MtrunA17_Chr3g0123331 | 63.377 | 385 | 138 | 3 | 62 | 444 | 23 | 406 | 5.23e-177 | 501 |
Msa1105540 | MtrunA17_Chr1g0210321 | 62.466 | 373 | 137 | 1 | 67 | 436 | 35 | 407 | 8.12e-177 | 504 |
Msa1105540 | MtrunA17_Chr1g0180381 | 60.471 | 382 | 144 | 1 | 66 | 440 | 34 | 415 | 4.69e-175 | 498 |
Msa1105540 | MtrunA17_Chr7g0264891 | 63.564 | 376 | 136 | 1 | 66 | 440 | 35 | 410 | 3.14e-174 | 496 |
Msa1105540 | MtrunA17_Chr4g0060211 | 55.440 | 386 | 163 | 4 | 66 | 444 | 51 | 434 | 3.27e-157 | 451 |
Msa1105540 | MtrunA17_Chr5g0416061 | 58.873 | 355 | 145 | 1 | 91 | 444 | 95 | 449 | 2.49e-148 | 429 |
Msa1105540 | MtrunA17_Chr8g0362561 | 55.801 | 362 | 152 | 2 | 91 | 444 | 94 | 455 | 2.99e-145 | 422 |
Msa1105540 | MtrunA17_Chr2g0288921 | 56.000 | 350 | 150 | 3 | 96 | 444 | 63 | 409 | 7.30e-143 | 414 |
Msa1105540 | MtrunA17_Chr5g0416041 | 59.040 | 354 | 144 | 1 | 92 | 444 | 96 | 449 | 2.15e-142 | 414 |
Msa1105540 | MtrunA17_Chr4g0075231 | 57.429 | 350 | 145 | 3 | 96 | 444 | 39 | 385 | 2.34e-142 | 412 |
Msa1105540 | MtrunA17_Chr6g0452861 | 56.780 | 354 | 152 | 1 | 92 | 444 | 100 | 453 | 1.08e-141 | 413 |
Msa1105540 | MtrunA17_Chr7g0216581 | 49.127 | 458 | 195 | 6 | 9 | 444 | 10 | 451 | 4.55e-140 | 409 |
Msa1105540 | MtrunA17_Chr8g0373761 | 45.070 | 355 | 185 | 7 | 96 | 444 | 42 | 392 | 2.84e-100 | 305 |
Msa1105540 | MtrunA17_Chr8g0373721 | 44.507 | 355 | 187 | 7 | 96 | 444 | 42 | 392 | 3.03e-100 | 305 |
Msa1105540 | MtrunA17_Chr3g0089181 | 44.507 | 355 | 187 | 7 | 96 | 444 | 23 | 373 | 1.27e-99 | 302 |
Msa1105540 | MtrunA17_Chr8g0373701 | 43.662 | 355 | 190 | 7 | 96 | 444 | 97 | 447 | 3.87e-96 | 296 |
Msa1105540 | MtrunA17_Chr8g0373731 | 45.352 | 355 | 184 | 7 | 96 | 444 | 42 | 392 | 4.23e-94 | 289 |
Msa1105540 | MtrunA17_Chr5g0403481 | 45.070 | 355 | 185 | 7 | 96 | 444 | 41 | 391 | 1.15e-89 | 277 |
Msa1105540 | MtrunA17_Chr5g0403461 | 45.070 | 355 | 185 | 7 | 96 | 444 | 41 | 391 | 1.15e-89 | 277 |
Msa1105540 | MtrunA17_Chr5g0403491 | 45.070 | 355 | 185 | 7 | 96 | 444 | 41 | 391 | 1.15e-89 | 277 |
Msa1105540 | MtrunA17_Chr4g0031851 | 45.062 | 324 | 170 | 6 | 121 | 440 | 14 | 333 | 4.86e-89 | 275 |
Msa1105540 | MtrunA17_Chr5g0403391 | 43.662 | 355 | 190 | 7 | 96 | 444 | 41 | 391 | 8.04e-88 | 273 |
Msa1105540 | MtrunA17_Chr5g0414541 | 42.697 | 356 | 192 | 8 | 96 | 444 | 41 | 391 | 8.59e-87 | 270 |
Msa1105540 | MtrunA17_Chr5g0403411 | 44.225 | 355 | 188 | 7 | 96 | 444 | 41 | 391 | 2.26e-86 | 269 |
Msa1105540 | MtrunA17_Chr1g0183941 | 44.981 | 269 | 144 | 3 | 171 | 437 | 1 | 267 | 6.24e-75 | 235 |
Msa1105540 | MtrunA17_Chr3g0113551 | 71.429 | 126 | 36 | 0 | 241 | 366 | 161 | 286 | 4.28e-61 | 201 |
Msa1105540 | MtrunA17_Chr6g0481851 | 39.636 | 275 | 108 | 6 | 129 | 401 | 6 | 224 | 5.79e-53 | 178 |
Msa1105540 | MtrunA17_Chr2g0288901 | 50.641 | 156 | 72 | 3 | 290 | 444 | 5 | 156 | 4.91e-46 | 156 |
Msa1105540 | MtrunA17_Chr2g0288911 | 58.197 | 122 | 50 | 1 | 171 | 291 | 1 | 122 | 2.76e-41 | 143 |
Msa1105540 | MtrunA17_Chr1g0212931 | 36.806 | 288 | 156 | 7 | 113 | 399 | 13 | 275 | 1.51e-39 | 144 |
Msa1105540 | MtrunA17_Chr1g0182021 | 35.540 | 287 | 161 | 4 | 113 | 399 | 62 | 324 | 4.54e-37 | 139 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1105540 | AT4G13710.1 | 75.524 | 429 | 95 | 4 | 26 | 444 | 42 | 470 | 0.0 | 681 |
Msa1105540 | AT4G13710.2 | 76.485 | 421 | 89 | 4 | 31 | 444 | 34 | 451 | 0.0 | 678 |
Msa1105540 | AT3G24670.1 | 76.376 | 436 | 98 | 2 | 11 | 444 | 8 | 440 | 0.0 | 668 |
Msa1105540 | AT3G07010.1 | 81.378 | 392 | 73 | 0 | 53 | 444 | 25 | 416 | 0.0 | 665 |
Msa1105540 | AT1G04680.1 | 80.977 | 389 | 70 | 1 | 60 | 444 | 41 | 429 | 0.0 | 661 |
Msa1105540 | AT4G13210.2 | 74.885 | 434 | 100 | 3 | 12 | 444 | 13 | 438 | 0.0 | 642 |
Msa1105540 | AT5G48900.1 | 81.538 | 390 | 72 | 0 | 55 | 444 | 28 | 417 | 0.0 | 636 |
Msa1105540 | AT3G07010.2 | 82.880 | 368 | 63 | 0 | 77 | 444 | 16 | 383 | 0.0 | 635 |
Msa1105540 | AT4G13210.1 | 79.695 | 394 | 79 | 1 | 52 | 444 | 8 | 401 | 0.0 | 631 |
Msa1105540 | AT3G24230.1 | 65.563 | 453 | 138 | 6 | 6 | 444 | 3 | 451 | 0.0 | 596 |
Msa1105540 | AT1G67750.1 | 71.916 | 381 | 105 | 1 | 64 | 444 | 30 | 408 | 0.0 | 572 |
Msa1105540 | AT5G63180.1 | 70.235 | 383 | 112 | 1 | 64 | 444 | 50 | 432 | 0.0 | 571 |
Msa1105540 | AT4G24780.2 | 71.728 | 382 | 107 | 1 | 64 | 444 | 27 | 408 | 0.0 | 560 |
Msa1105540 | AT4G24780.1 | 71.728 | 382 | 107 | 1 | 64 | 444 | 27 | 408 | 0.0 | 560 |
Msa1105540 | AT3G27400.2 | 66.404 | 381 | 127 | 1 | 64 | 444 | 37 | 416 | 0.0 | 531 |
Msa1105540 | AT3G27400.1 | 66.404 | 381 | 127 | 1 | 64 | 444 | 33 | 412 | 0.0 | 531 |
Msa1105540 | AT3G53190.1 | 62.963 | 378 | 133 | 1 | 66 | 436 | 37 | 414 | 2.32e-172 | 492 |
Msa1105540 | AT5G04310.3 | 57.561 | 410 | 158 | 2 | 42 | 435 | 25 | 434 | 1.73e-170 | 487 |
Msa1105540 | AT5G04310.1 | 57.561 | 410 | 158 | 2 | 42 | 435 | 25 | 434 | 7.16e-169 | 484 |
Msa1105540 | AT5G04310.2 | 57.561 | 410 | 158 | 2 | 42 | 435 | 25 | 434 | 7.16e-169 | 484 |
Msa1105540 | AT3G54920.1 | 57.360 | 394 | 144 | 4 | 62 | 440 | 32 | 416 | 2.95e-163 | 470 |
Msa1105540 | AT5G55720.1 | 55.875 | 383 | 157 | 5 | 63 | 444 | 21 | 392 | 2.37e-154 | 443 |
Msa1105540 | AT1G11920.1 | 59.714 | 350 | 138 | 3 | 96 | 444 | 37 | 384 | 5.01e-154 | 442 |
Msa1105540 | AT3G01270.1 | 53.301 | 409 | 181 | 3 | 46 | 444 | 67 | 475 | 3.50e-152 | 441 |
Msa1105540 | AT1G14420.1 | 55.556 | 360 | 154 | 1 | 91 | 444 | 100 | 459 | 5.61e-149 | 432 |
Msa1105540 | AT5G15110.1 | 57.465 | 355 | 149 | 2 | 92 | 444 | 118 | 472 | 1.24e-148 | 431 |
Msa1105540 | AT4G22090.1 | 56.857 | 350 | 147 | 3 | 96 | 444 | 47 | 393 | 4.24e-147 | 425 |
Msa1105540 | AT4G22080.1 | 56.857 | 350 | 147 | 3 | 96 | 444 | 47 | 393 | 1.02e-146 | 424 |
Msa1105540 | AT2G02720.1 | 46.204 | 461 | 215 | 6 | 6 | 444 | 6 | 455 | 6.38e-142 | 414 |
Msa1105540 | AT1G30350.1 | 53.009 | 349 | 148 | 3 | 96 | 444 | 36 | 368 | 5.70e-129 | 377 |
Msa1105540 | AT5G09280.1 | 48.387 | 248 | 125 | 3 | 129 | 375 | 6 | 251 | 3.22e-78 | 245 |
Msa1105540 | AT3G09540.1 | 38.408 | 289 | 150 | 7 | 113 | 399 | 61 | 323 | 2.85e-42 | 154 |
Msa1105540 | AT3G55140.1 | 37.884 | 293 | 146 | 9 | 113 | 399 | 14 | 276 | 7.03e-42 | 151 |
Msa1105540 | AT3G09540.3 | 38.062 | 289 | 147 | 8 | 113 | 399 | 61 | 319 | 9.39e-40 | 147 |
Msa1105540 | AT3G55140.2 | 36.719 | 256 | 131 | 7 | 150 | 399 | 22 | 252 | 5.25e-35 | 132 |
Msa1105540 | AT3G09540.2 | 36.992 | 246 | 129 | 5 | 113 | 357 | 61 | 281 | 8.38e-35 | 131 |
Find 180 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCATTGCATACAACCATTT+TGG | 0.110425 | 7_3:+44099560 | Msa1105540:CDS |
TCTTGTCAACAGTTAGATTT+TGG | 0.119998 | 7_3:+44100597 | Msa1105540:three_prime_UTR |
CGTAGCTCCCCTTCCCATTT+TGG | 0.137331 | 7_3:+44099161 | Msa1105540:CDS |
ATGAGAACTGTTGTTGTTAT+TGG | 0.149715 | 7_3:+44100639 | Msa1105540:three_prime_UTR |
TCTTTGGTTCCAGTCATATT+TGG | 0.228663 | 7_3:+44099219 | Msa1105540:CDS |
TCATGATCAATTCTTGCTTC+AGG | 0.237394 | 7_3:-44098998 | None:intergenic |
TGGTCTTGTTGATGCTATTA+TGG | 0.249104 | 7_3:+44099274 | Msa1105540:CDS |
TTGCATTGTTATAGTAGATT+TGG | 0.253485 | 7_3:+44100519 | Msa1105540:three_prime_UTR |
CCATTGTCCTCCATCCAAAA+TGG | 0.255429 | 7_3:-44099175 | None:intergenic |
TAGAAGCCATCTCTCACTTT+TGG | 0.262555 | 7_3:+44100681 | Msa1105540:three_prime_UTR |
GTTCTTTCCCTTTACTCATT+TGG | 0.263710 | 7_3:-44100392 | None:intergenic |
GGTGATGGCATTTCCATCTT+TGG | 0.269913 | 7_3:+44099203 | Msa1105540:CDS |
TATGCTAGAGCCTCAAGTTT+AGG | 0.285322 | 7_3:+44100271 | Msa1105540:CDS |
AATGATACAGGTTATGCTAT+TGG | 0.286003 | 7_3:+44099496 | Msa1105540:intron |
AGAAGAAGATGAGAAGAAAA+TGG | 0.287874 | 7_3:-44095103 | None:intergenic |
TCCCTATTGCCCATTTCATT+TGG | 0.293764 | 7_3:-44100877 | None:intergenic |
TGGATACAGGGTCCGGAGTA+TGG | 0.302482 | 7_3:+44100164 | Msa1105540:CDS |
TTCACGGGGTCGTCGTCTCT+TGG | 0.302742 | 7_3:-44098894 | None:intergenic |
GCTGATTGTGCCATTGGTTT+TGG | 0.316248 | 7_3:+44098822 | Msa1105540:CDS |
CTAGTTACCTTGGCATCCTT+TGG | 0.320663 | 7_3:-44099595 | None:intergenic |
TGACGGAGAGTGCCAGGTCT+TGG | 0.329790 | 7_3:-44098918 | None:intergenic |
TTGATTTGTCCCAAATGAAA+TGG | 0.332307 | 7_3:+44100867 | Msa1105540:three_prime_UTR |
CCCTATTGCCCATTTCATTT+GGG | 0.336426 | 7_3:-44100876 | None:intergenic |
TCGGCTTACAATCATGGATA+TGG | 0.339277 | 7_3:-44099121 | None:intergenic |
ATGCTAGAGCCTCAAGTTTA+GGG | 0.340135 | 7_3:+44100272 | Msa1105540:CDS |
TTGTAAGAATGTTACCTCTT+TGG | 0.340895 | 7_3:-44100042 | None:intergenic |
GGATAAGACCCTCCCCAAAA+TGG | 0.344066 | 7_3:-44099574 | None:intergenic |
GCCAATGTTCATATTGCCTT+TGG | 0.350632 | 7_3:+44099050 | Msa1105540:CDS |
TCCGACTAATGAAGATGATT+TGG | 0.354298 | 7_3:-44100296 | None:intergenic |
TGAATCCCTTGGAAAATTAG+AGG | 0.369319 | 7_3:-44100731 | None:intergenic |
ATTGGCACCACGACCATCTA+TGG | 0.380940 | 7_3:-44099033 | None:intergenic |
CATGATCAATTCTTGCTTCA+GGG | 0.386947 | 7_3:-44098997 | None:intergenic |
AATGTTACCTCTTTGGCAAA+AGG | 0.387769 | 7_3:-44100035 | None:intergenic |
ATGATACAGGTTATGCTATT+GGG | 0.392819 | 7_3:+44099497 | Msa1105540:intron |
CCCAAATGAAATGGGCAATA+GGG | 0.394384 | 7_3:+44100876 | Msa1105540:three_prime_UTR |
GACGGAGAGTGCCAGGTCTT+GGG | 0.402712 | 7_3:-44098917 | None:intergenic |
TCCCAAATGAAATGGGCAAT+AGG | 0.414633 | 7_3:+44100875 | Msa1105540:three_prime_UTR |
GGTCTTGTTGATGCTATTAT+GGG | 0.421679 | 7_3:+44099275 | Msa1105540:CDS |
TCACGGGGTCGTCGTCTCTT+GGG | 0.425792 | 7_3:-44098893 | None:intergenic |
TTGCCTTGGCTGTTAATTGT+GGG | 0.427394 | 7_3:-44099990 | None:intergenic |
TCCCAGTCGGCTTACAATCA+TGG | 0.429765 | 7_3:-44099127 | None:intergenic |
ATAGAAAGACAAAGAAACTA+AGG | 0.430405 | 7_3:-44100775 | None:intergenic |
GAGTATGGAAGGGTTGGAAT+TGG | 0.435726 | 7_3:+44100179 | Msa1105540:CDS |
TCAACAACCAAATGAGTAAA+GGG | 0.435964 | 7_3:+44100385 | Msa1105540:three_prime_UTR |
GGAGAGAAAGAAAAGCATAA+AGG | 0.436299 | 7_3:+44100455 | Msa1105540:three_prime_UTR |
AGTGCCAGGTCTTGGGTTCA+CGG | 0.439411 | 7_3:-44098910 | None:intergenic |
AACAGTTTCAAGACCATAGA+TGG | 0.441561 | 7_3:+44099020 | Msa1105540:CDS |
CACTGGGTGATGTATGCTAT+TGG | 0.442502 | 7_3:+44099954 | Msa1105540:CDS |
GTTGCCTTGGCTGTTAATTG+TGG | 0.451055 | 7_3:-44099991 | None:intergenic |
TATAACAATGCAATAATAAG+AGG | 0.451336 | 7_3:-44100509 | None:intergenic |
CTCAATTTACCTCGTTGTGG+TGG | 0.451940 | 7_3:-44099334 | None:intergenic |
TATGGAAGGGTTGGAATTGG+AGG | 0.453341 | 7_3:+44100182 | Msa1105540:CDS |
GTGCCAGGTCTTGGGTTCAC+GGG | 0.453527 | 7_3:-44098909 | None:intergenic |
GTGACAAAGAGGGTGGATAC+AGG | 0.460057 | 7_3:+44100151 | Msa1105540:CDS |
TGATTTGTCCCAAATGAAAT+GGG | 0.461984 | 7_3:+44100868 | Msa1105540:three_prime_UTR |
ATGTTACCTCTTTGGCAAAA+GGG | 0.462229 | 7_3:-44100034 | None:intergenic |
GAAAGAAAAGCATAAAGGAA+TGG | 0.470361 | 7_3:+44100460 | Msa1105540:three_prime_UTR |
ATCAACAACCAAATGAGTAA+AGG | 0.470711 | 7_3:+44100384 | Msa1105540:three_prime_UTR |
ACGGCGTGACGGAGAGTGCC+AGG | 0.476026 | 7_3:-44098924 | None:intergenic |
AATATGACTGGAACCAAAGA+TGG | 0.477110 | 7_3:-44099216 | None:intergenic |
GTGGTGGGTGAAGTAGTTAT+TGG | 0.479572 | 7_3:-44099318 | None:intergenic |
GCTGGCGCTGTGACAAGCTT+TGG | 0.480343 | 7_3:+44098778 | Msa1105540:CDS |
GGTTGGAATTGGAGGTCTGA+GGG | 0.482075 | 7_3:+44100190 | Msa1105540:CDS |
CTGGTGTTATTAAATGTCGC+CGG | 0.482263 | 7_3:+44100335 | Msa1105540:CDS |
CGGTTGGCTGATTGTGCCAT+TGG | 0.488142 | 7_3:+44098816 | Msa1105540:CDS |
ATCCATGATTGTAAGCCGAC+TGG | 0.492456 | 7_3:+44099125 | Msa1105540:CDS |
GCCGCAGCTCCTCTTCCTGA+TGG | 0.492712 | 7_3:-44100244 | None:intergenic |
CAGCGCCAGCAGTCATCCAT+TGG | 0.493207 | 7_3:-44098765 | None:intergenic |
CATTGTCCTCCATCCAAAAT+GGG | 0.494585 | 7_3:-44099174 | None:intergenic |
TCCTGAGGAGATTGCTTCCA+TGG | 0.495371 | 7_3:+44095884 | Msa1105540:CDS |
TCTCTGTCTAATTGCGCTGA+TGG | 0.499109 | 7_3:+44099254 | Msa1105540:CDS |
TGGTGTTATTAAATGTCGCC+GGG | 0.500739 | 7_3:+44100336 | Msa1105540:CDS |
GTAGTTATTGGAAACGGTAA+TGG | 0.501809 | 7_3:-44099306 | None:intergenic |
TTCATTAGAATCAATAGCAT+TGG | 0.503173 | 7_3:-44095258 | None:intergenic |
TACAGGGTCCGGAGTATGGA+AGG | 0.503644 | 7_3:+44100168 | Msa1105540:CDS |
GTGAAGCAACAATGGAGTTA+CGG | 0.503946 | 7_3:+44095180 | Msa1105540:exon |
TTAGTCGGAACTTTAACTGC+AGG | 0.504457 | 7_3:+44100310 | Msa1105540:CDS |
GAATGTATTGATCAAATAGT+TGG | 0.508802 | 7_3:+44100898 | Msa1105540:three_prime_UTR |
AAGAAGCGTGATAGCGAGAA+TGG | 0.510985 | 7_3:-44095225 | None:intergenic |
CCCAAAATGGTTGTATGCAA+TGG | 0.513203 | 7_3:-44099561 | None:intergenic |
GGGCAAGGTATCTGTTGCCT+TGG | 0.513269 | 7_3:-44100004 | None:intergenic |
GAAATCCAATGGATGACTGC+TGG | 0.513725 | 7_3:+44098760 | Msa1105540:CDS |
GTGATCAATCCAAATATGAC+TGG | 0.515085 | 7_3:-44099228 | None:intergenic |
TTGTTATAGTAGATTTGGAT+TGG | 0.515669 | 7_3:+44100524 | Msa1105540:three_prime_UTR |
ATTGGAAACGGTAATGGCGG+TGG | 0.517945 | 7_3:-44099300 | None:intergenic |
GTCACGCCGTCATTCAAGAT+AGG | 0.520035 | 7_3:+44098937 | Msa1105540:CDS |
GAATCCCTTGGAAAATTAGA+GGG | 0.523122 | 7_3:-44100730 | None:intergenic |
CATGATGATAGTGTTGTGAA+TGG | 0.528531 | 7_3:+44095433 | Msa1105540:intron |
CTTTGGCAAAAGGGTTCTGA+GGG | 0.532600 | 7_3:-44100025 | None:intergenic |
GTACCGCCGCAGAAAGCGGT+TGG | 0.543660 | 7_3:+44098800 | Msa1105540:CDS |
AATAGTAATGCATGCTCCAA+AGG | 0.544329 | 7_3:-44099066 | None:intergenic |
TCTTTGGCAAAAGGGTTCTG+AGG | 0.544752 | 7_3:-44100026 | None:intergenic |
TCCATGATTGTAAGCCGACT+GGG | 0.546175 | 7_3:+44099126 | Msa1105540:CDS |
ACCATGGAAGCAATCTCCTC+AGG | 0.547358 | 7_3:-44095885 | None:intergenic |
GAGCTTGAATAATTCATCAA+TGG | 0.547562 | 7_3:+44095477 | Msa1105540:CDS |
AAGAGGGTGGATACAGGGTC+CGG | 0.551709 | 7_3:+44100157 | Msa1105540:CDS |
TCAATTTACCTCGTTGTGGT+GGG | 0.552926 | 7_3:-44099333 | None:intergenic |
TTGGGGAGGGTCTTATCCAA+AGG | 0.555778 | 7_3:+44099579 | Msa1105540:CDS |
TCCTCCATCCAAAATGGGAA+GGG | 0.556374 | 7_3:-44099169 | None:intergenic |
TAGAAAGACAAAGAAACTAA+GGG | 0.556379 | 7_3:-44100774 | None:intergenic |
AGACAAAGAAACTAAGGGGA+AGG | 0.557948 | 7_3:-44100769 | None:intergenic |
AAAACAGAGTGAAGCAACAA+TGG | 0.561784 | 7_3:+44095172 | Msa1105540:exon |
GGTCCGGAGTATGGAAGGGT+TGG | 0.562652 | 7_3:+44100173 | Msa1105540:CDS |
AATGCTATCGGTGGCCGCGA+TGG | 0.563732 | 7_3:+44098849 | Msa1105540:CDS |
ATCACCAATGTCATCATCCA+TGG | 0.564338 | 7_3:+44099095 | Msa1105540:CDS |
CTATCGGTGGCCGCGATGGA+AGG | 0.564428 | 7_3:+44098853 | Msa1105540:CDS |
GTCTTATCCAAAGGATGCCA+AGG | 0.567344 | 7_3:+44099588 | Msa1105540:CDS |
GGTGAAGTAGTTATTGGAAA+CGG | 0.568326 | 7_3:-44099312 | None:intergenic |
GGAACTTTAACTGCAGGTGC+TGG | 0.568678 | 7_3:+44100316 | Msa1105540:CDS |
GCCAAATCATCTTCATTAGT+CGG | 0.570138 | 7_3:+44100295 | Msa1105540:CDS |
GACCCCGTGAACCCAAGACC+TGG | 0.571184 | 7_3:+44098906 | Msa1105540:CDS |
GTCCTCCATCCAAAATGGGA+AGG | 0.575724 | 7_3:-44099170 | None:intergenic |
CAGCCAACCGCTTTCTGCGG+CGG | 0.578877 | 7_3:-44098803 | None:intergenic |
TGTATTAACACATGCCACCC+CGG | 0.580417 | 7_3:-44100354 | None:intergenic |
TACGCAATCACACGGAGAGA+AGG | 0.580498 | 7_3:+44098709 | Msa1105540:CDS |
AGAGGGGTACACTATTCCAC+AGG | 0.581096 | 7_3:-44100809 | None:intergenic |
TGCCAGGTCTTGGGTTCACG+GGG | 0.582221 | 7_3:-44098908 | None:intergenic |
TGACAAAGAGGGTGGATACA+GGG | 0.585715 | 7_3:+44100152 | Msa1105540:CDS |
GGGTTGGAATTGGAGGTCTG+AGG | 0.587913 | 7_3:+44100189 | Msa1105540:CDS |
CCTCCATCCAAAATGGGAAG+GGG | 0.592528 | 7_3:-44099168 | None:intergenic |
CAATGGCCTATCTTGAATGA+CGG | 0.593970 | 7_3:-44098943 | None:intergenic |
AATCAGCCAACCGCTTTCTG+CGG | 0.594304 | 7_3:-44098806 | None:intergenic |
TAAACAATGACTATACACAC+TGG | 0.595352 | 7_3:+44099937 | Msa1105540:CDS |
TAATCTCCAAAAGTGAGAGA+TGG | 0.597530 | 7_3:-44100687 | None:intergenic |
ATAATTCATCAATGGCGGAA+AGG | 0.597934 | 7_3:+44095485 | Msa1105540:CDS |
AGTCTCAATTTACCTCGTTG+TGG | 0.602217 | 7_3:-44099337 | None:intergenic |
CAAAAGGGTTCTGAGGGGCA+AGG | 0.604683 | 7_3:-44100019 | None:intergenic |
AATCATGGATATGGACACCA+TGG | 0.604716 | 7_3:-44099112 | None:intergenic |
GACAAAGAAACTAAGGGGAA+GGG | 0.605532 | 7_3:-44100768 | None:intergenic |
TCCAAAGGCAATATGAACAT+TGG | 0.605546 | 7_3:-44099051 | None:intergenic |
TGATTTGGCCCCTAAACTTG+AGG | 0.605907 | 7_3:-44100281 | None:intergenic |
ATTCCAACCCTTCCATACTC+CGG | 0.611120 | 7_3:-44100176 | None:intergenic |
CTTGAATAATTCATCAATGG+CGG | 0.613119 | 7_3:+44095480 | Msa1105540:CDS |
TTCAAGACCATAGATGGTCG+TGG | 0.615460 | 7_3:+44099026 | Msa1105540:CDS |
GTTATTAAATGTCGCCGGGG+TGG | 0.616534 | 7_3:+44100340 | Msa1105540:CDS |
TATCTTGAATGACGGCGTGA+CGG | 0.616846 | 7_3:-44098935 | None:intergenic |
AGGACAATGGCTGATGGTGA+TGG | 0.620179 | 7_3:+44099188 | Msa1105540:CDS |
TTTGGTCGCAATGCTATCGG+TGG | 0.622293 | 7_3:+44098840 | Msa1105540:CDS |
GTGTGGGACTGGAAATCCAA+TGG | 0.622592 | 7_3:+44098749 | Msa1105540:CDS |
TCATTCAAGATAGGCCATTG+TGG | 0.624115 | 7_3:+44098946 | Msa1105540:CDS |
CTATTGATTCTAATGAATCA+CGG | 0.625598 | 7_3:+44095264 | Msa1105540:CDS |
TAAGCCGACTGGGAATGCTA+TGG | 0.626089 | 7_3:+44099136 | Msa1105540:CDS |
TTTGGTACCGCCGCAGAAAG+CGG | 0.627376 | 7_3:+44098796 | Msa1105540:CDS |
TCCATCAGGAAGAGGAGCTG+CGG | 0.628803 | 7_3:+44100243 | Msa1105540:CDS |
TGGGTGATGTATGCTATTGG+AGG | 0.631164 | 7_3:+44099957 | Msa1105540:CDS |
CAGGACTATACGCAATCACA+CGG | 0.632843 | 7_3:+44098701 | Msa1105540:intron |
GGATGGAGGACAATGGCTGA+TGG | 0.643191 | 7_3:+44099182 | Msa1105540:CDS |
AAACAATGACTATACACACT+GGG | 0.644998 | 7_3:+44099938 | Msa1105540:CDS |
TGCTAGAGCCTCAAGTTTAG+GGG | 0.654577 | 7_3:+44100273 | Msa1105540:CDS |
ACAGGGTCCGGAGTATGGAA+GGG | 0.658271 | 7_3:+44100169 | Msa1105540:CDS |
GAATTATTACGTATCAACCA+TGG | 0.659930 | 7_3:-44095901 | None:intergenic |
CTCTTGAACACAATCCACAA+TGG | 0.663084 | 7_3:-44098960 | None:intergenic |
TGGACAGGTGACAAAGAGGG+TGG | 0.664985 | 7_3:+44100144 | Msa1105540:intron |
GAACCCACAATTAACAGCCA+AGG | 0.665968 | 7_3:+44099987 | Msa1105540:CDS |
GAATATTGCAGATGTAGACA+CGG | 0.668694 | 7_3:+44099900 | Msa1105540:intron |
AGCATTGCGACCAAAACCAA+TGG | 0.669104 | 7_3:-44098832 | None:intergenic |
ACTGTTGACAAGATAAACAG+TGG | 0.669346 | 7_3:-44100587 | None:intergenic |
AGAAAGACAAAGAAACTAAG+GGG | 0.669765 | 7_3:-44100773 | None:intergenic |
GTTATTGGAAACGGTAATGG+CGG | 0.672422 | 7_3:-44099303 | None:intergenic |
GGTACACTATTCCACAGGGG+AGG | 0.673688 | 7_3:-44100804 | None:intergenic |
GGCACACATACACAATCGAG+AGG | 0.676491 | 7_3:-44100827 | None:intergenic |
GACACCATGGATGATGACAT+TGG | 0.680615 | 7_3:-44099099 | None:intergenic |
GCACACATACACAATCGAGA+GGG | 0.683744 | 7_3:-44100826 | None:intergenic |
AATATTGCAGATGTAGACAC+GGG | 0.684120 | 7_3:+44099901 | Msa1105540:intron |
GAGGGGTACACTATTCCACA+GGG | 0.684890 | 7_3:-44100808 | None:intergenic |
TCTATATGTATCCTCCCCTG+TGG | 0.690350 | 7_3:+44100793 | Msa1105540:three_prime_UTR |
CTGTTGACAAGATAAACAGT+GGG | 0.691709 | 7_3:-44100586 | None:intergenic |
ATGTGGACAGGTGACAAAGA+GGG | 0.696684 | 7_3:+44100141 | Msa1105540:intron |
CACACATACACAATCGAGAG+GGG | 0.700555 | 7_3:-44100825 | None:intergenic |
CGAACCATAGCATTCCCAGT+CGG | 0.703490 | 7_3:-44099140 | None:intergenic |
GCATGCAGTTGATAATCCTG+AGG | 0.704437 | 7_3:+44095869 | Msa1105540:CDS |
GATGTGGACAGGTGACAAAG+AGG | 0.712511 | 7_3:+44100140 | Msa1105540:intron |
TATAGTCATTGTTTACCACG+TGG | 0.716427 | 7_3:-44099929 | None:intergenic |
TTTGGCAAAAGGGTTCTGAG+GGG | 0.747633 | 7_3:-44100024 | None:intergenic |
GGTGTTATTAAATGTCGCCG+GGG | 0.749848 | 7_3:+44100337 | Msa1105540:CDS |
GATTGTGTTCAAGAGAGACA+TGG | 0.751862 | 7_3:+44098968 | Msa1105540:CDS |
CAACGTAGTACCTTCCATCG+CGG | 0.762653 | 7_3:-44098863 | None:intergenic |
CTACTTCACCCACCACAACG+AGG | 0.767107 | 7_3:+44099325 | Msa1105540:CDS |
TAGACACGGGTATTTCCACG+TGG | 0.797672 | 7_3:+44099914 | Msa1105540:CDS |
AGGGGTACACTATTCCACAG+GGG | 0.822508 | 7_3:-44100807 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTGTAATGATTAAAAT+CGG | + | chr7_3:44095575-44095594 | Msa1105540:intron | 10.0% |
!! | TTATAATTAATGACATTTAT+AGG | + | chr7_3:44096809-44096828 | Msa1105540:intron | 10.0% |
!! | TCATATTAAAAAATTAGAAA+AGG | - | chr7_3:44097571-44097590 | None:intergenic | 10.0% |
!! | TTTAGATAAAAAAATTGAGT+TGG | + | chr7_3:44096083-44096102 | Msa1105540:intron | 15.0% |
!! | TATTCACAACAAATTATAAA+TGG | - | chr7_3:44096474-44096493 | None:intergenic | 15.0% |
!! | AAAAAAAAAACATTTGGAAA+TGG | - | chr7_3:44096523-44096542 | None:intergenic | 15.0% |
!! | CCATAAAAAAAAAAAACATT+TGG | - | chr7_3:44096529-44096548 | None:intergenic | 15.0% |
!!! | CCAAATGTTTTTTTTTTTTA+TGG | + | chr7_3:44096526-44096545 | Msa1105540:intron | 15.0% |
!!! | TTTTTTTTTTATGGTTAAAG+TGG | + | chr7_3:44096535-44096554 | Msa1105540:intron | 15.0% |
!! | TATTAATTATATAAAACCAG+AGG | - | chr7_3:44097045-44097064 | None:intergenic | 15.0% |
!! | ATCTAAATCTATCAATAAAA+AGG | - | chr7_3:44097377-44097396 | None:intergenic | 15.0% |
!!! | TAACTTCTAAAATTTTTAGT+AGG | + | chr7_3:44097913-44097932 | Msa1105540:intron | 15.0% |
!! | AATATATCAAGAAAATGTTA+TGG | - | chr7_3:44098143-44098162 | None:intergenic | 15.0% |
!!! | AACATTTTCTTGATATATTT+TGG | + | chr7_3:44098144-44098163 | Msa1105540:intron | 15.0% |
!!! | AGTATAACTTCTAAAATTAT+TGG | + | chr7_3:44098585-44098604 | Msa1105540:intron | 15.0% |
!!! | ATACTTGTTAAATTTTAAAC+AGG | + | chr7_3:44098682-44098701 | Msa1105540:intron | 15.0% |
!!! | TTATTTTTTTTCCTTTTTGA+AGG | + | chr7_3:44099635-44099654 | Msa1105540:intron | 15.0% |
!!! | TTTAGTACTAGTATTTATTT+TGG | + | chr7_3:44099668-44099687 | Msa1105540:intron | 15.0% |
!!! | TTAGTACTAGTATTTATTTT+GGG | + | chr7_3:44099669-44099688 | Msa1105540:intron | 15.0% |
!! | TGATAAACTTTACTAAATAT+TGG | + | chr7_3:44100110-44100129 | Msa1105540:intron | 15.0% |
!! | GAATTAAAAAAGAAAAGAAA+AGG | + | chr7_3:44100434-44100453 | Msa1105540:three_prime_UTR | 15.0% |
!!! | CTTTTTCATCAAAATTAATC+AGG | - | chr7_3:44096615-44096634 | None:intergenic | 20.0% |
!!! | TGGTGATATTTATTTTGAAA+AGG | - | chr7_3:44096841-44096860 | None:intergenic | 20.0% |
!! | TTTCAAAATAAATATCACCA+TGG | + | chr7_3:44096841-44096860 | Msa1105540:intron | 20.0% |
!! | AATATAAAGGTCATCAAATA+GGG | - | chr7_3:44096961-44096980 | None:intergenic | 20.0% |
!!! | AAAAGCATCAAAGAATATAA+AGG | - | chr7_3:44096974-44096993 | None:intergenic | 20.0% |
!! | ATTAAAATGACTCTAGTAAA+AGG | - | chr7_3:44097019-44097038 | None:intergenic | 20.0% |
!!! | ATAATTCTAAAAACATCATG+AGG | - | chr7_3:44097683-44097702 | None:intergenic | 20.0% |
!! | AAGTATAAAAAGACAAACAA+GGG | - | chr7_3:44097715-44097734 | None:intergenic | 20.0% |
!! | TAGAGAAAATTGAAATATGA+TGG | + | chr7_3:44098323-44098342 | Msa1105540:intron | 20.0% |
!! | TTAAAAGGTAGTATTAGAAA+AGG | - | chr7_3:44099412-44099431 | None:intergenic | 20.0% |
!! | ATAAATACTAGTACTAAAAC+TGG | - | chr7_3:44099666-44099685 | None:intergenic | 20.0% |
!! | AAATATTGGAAAATTTGATG+TGG | + | chr7_3:44100124-44100143 | Msa1105540:intron | 20.0% |
!! | TATAACAATGCAATAATAAG+AGG | - | chr7_3:44100512-44100531 | None:intergenic | 20.0% |
!!! | AAAATAAATTTTGAATCCCT+TGG | - | chr7_3:44100745-44100764 | None:intergenic | 20.0% |
!!! | TCAAGTGTTTTCTAAATAAA+TGG | - | chr7_3:44100851-44100870 | None:intergenic | 20.0% |
! | TTCATTAGAATCAATAGCAT+TGG | - | chr7_3:44095261-44095280 | None:intergenic | 25.0% |
!!! | CTATTGATTCTAATGAATCA+CGG | + | chr7_3:44095264-44095283 | Msa1105540:CDS | 25.0% |
! | TTGTAGTAAAACAGAATCAA+CGG | - | chr7_3:44095734-44095753 | None:intergenic | 25.0% |
! | TCGTTTAGTGATGATTTAAA+CGG | + | chr7_3:44095782-44095801 | Msa1105540:intron | 25.0% |
!! | CTTTTATCCTAATTTGAATC+TGG | + | chr7_3:44096005-44096024 | Msa1105540:intron | 25.0% |
! | GAGTTGCATATGATATTTAT+TGG | + | chr7_3:44096050-44096069 | Msa1105540:intron | 25.0% |
!!! | ATTGAGTTGGAGTATTTTTT+TGG | + | chr7_3:44096096-44096115 | Msa1105540:intron | 25.0% |
! | AATACAAACTAAAACCAAGT+GGG | - | chr7_3:44096289-44096308 | None:intergenic | 25.0% |
! | AAATACAAACTAAAACCAAG+TGG | - | chr7_3:44096290-44096309 | None:intergenic | 25.0% |
! | ACAATTAGATGTGCTTAATA+TGG | + | chr7_3:44096400-44096419 | Msa1105540:intron | 25.0% |
!!! | TTTGTTGTGAATACTCTTTT+TGG | + | chr7_3:44096481-44096500 | Msa1105540:intron | 25.0% |
!!! | ATTTTGATGAAAAAGTGAGT+TGG | + | chr7_3:44096620-44096639 | Msa1105540:intron | 25.0% |
! | TAAATATCACCATGGAAAAA+CGG | + | chr7_3:44096849-44096868 | Msa1105540:intron | 25.0% |
! | ACAATTTCTAACTTTCTTGA+CGG | - | chr7_3:44096877-44096896 | None:intergenic | 25.0% |
! | AAATTGTATGAGTAATTGCA+TGG | + | chr7_3:44096890-44096909 | Msa1105540:intron | 25.0% |
! | AATTGTATGAGTAATTGCAT+GGG | + | chr7_3:44096891-44096910 | Msa1105540:intron | 25.0% |
! | GAATATAAAGGTCATCAAAT+AGG | - | chr7_3:44096962-44096981 | None:intergenic | 25.0% |
! | GAAATTTATTATGACCGAAA+TGG | - | chr7_3:44097221-44097240 | None:intergenic | 25.0% |
!! | GTAAAAGCAATTTTCAGATA+AGG | - | chr7_3:44097265-44097284 | None:intergenic | 25.0% |
! | AAGCTTAGATTGAGTATAAA+GGG | - | chr7_3:44097598-44097617 | None:intergenic | 25.0% |
! | TAAGCTTAGATTGAGTATAA+AGG | - | chr7_3:44097599-44097618 | None:intergenic | 25.0% |
! | ACTCAATCTAAGCTTAATTA+TGG | + | chr7_3:44097603-44097622 | Msa1105540:intron | 25.0% |
! | GAAGTATAAAAAGACAAACA+AGG | - | chr7_3:44097716-44097735 | None:intergenic | 25.0% |
! | GTCTAATCAGAAATTTATGT+GGG | - | chr7_3:44097738-44097757 | None:intergenic | 25.0% |
! | AGTCTAATCAGAAATTTATG+TGG | - | chr7_3:44097739-44097758 | None:intergenic | 25.0% |
!! | GAAGAGTGATTTACTAATTT+TGG | - | chr7_3:44097827-44097846 | None:intergenic | 25.0% |
!!! | TTTTCTTGATATATTTTGGC+TGG | + | chr7_3:44098148-44098167 | Msa1105540:intron | 25.0% |
! | TGGTCATTTAATAAGTTCAT+GGG | - | chr7_3:44098208-44098227 | None:intergenic | 25.0% |
! | TTGGTCATTTAATAAGTTCA+TGG | - | chr7_3:44098209-44098228 | None:intergenic | 25.0% |
! | TTATTAAATGACCAAGATTC+AGG | + | chr7_3:44098214-44098233 | Msa1105540:intron | 25.0% |
! | ATTATTAACTTCCTGAATCT+TGG | - | chr7_3:44098228-44098247 | None:intergenic | 25.0% |
! | TTATTATTGATGTCTGTTGA+GGG | - | chr7_3:44098439-44098458 | None:intergenic | 25.0% |
! | ATTATTATTGATGTCTGTTG+AGG | - | chr7_3:44098440-44098459 | None:intergenic | 25.0% |
! | TTTAGAAGTTATACTGCTAA+GGG | - | chr7_3:44098580-44098599 | None:intergenic | 25.0% |
!!! | TTTTAGAAGTTATACTGCTA+AGG | - | chr7_3:44098581-44098600 | None:intergenic | 25.0% |
!! | TTTTCTGTTCAATTCAACAT+TGG | - | chr7_3:44098663-44098682 | None:intergenic | 25.0% |
! | TTACTTAAGATAATGAAGGA+GGG | - | chr7_3:44099365-44099384 | None:intergenic | 25.0% |
!! | GTTGTTACTTAAGATAATGA+AGG | - | chr7_3:44099369-44099388 | None:intergenic | 25.0% |
! | AATTGAGTTCAAAATGATAC+AGG | + | chr7_3:44099484-44099503 | Msa1105540:intron | 25.0% |
! | ATGAGAAGTCTACTAAAATT+GGG | + | chr7_3:44099735-44099754 | Msa1105540:intron | 25.0% |
! | AGAAATAGACAGAGAATTTA+TGG | - | chr7_3:44099857-44099876 | None:intergenic | 25.0% |
! | TTCTTAGCTAATGAAATATG+TGG | + | chr7_3:44100073-44100092 | Msa1105540:intron | 25.0% |
!!! | TTCTTTTTTTCAGTTTGCAT+GGG | - | chr7_3:44100417-44100436 | None:intergenic | 25.0% |
!!! | ATTCTTTTTTTCAGTTTGCA+TGG | - | chr7_3:44100418-44100437 | None:intergenic | 25.0% |
! | TTGCATTGTTATAGTAGATT+TGG | + | chr7_3:44100519-44100538 | Msa1105540:three_prime_UTR | 25.0% |
! | TTGTTATAGTAGATTTGGAT+TGG | + | chr7_3:44100524-44100543 | Msa1105540:three_prime_UTR | 25.0% |
! | TAGAAAGACAAAGAAACTAA+GGG | - | chr7_3:44100777-44100796 | None:intergenic | 25.0% |
! | ATAGAAAGACAAAGAAACTA+AGG | - | chr7_3:44100778-44100797 | None:intergenic | 25.0% |
!! | GAATGTATTGATCAAATAGT+TGG | + | chr7_3:44100898-44100917 | Msa1105540:three_prime_UTR | 25.0% |
! | TTCTTTCGTTTTCTCTGTTT+TGG | - | chr7_3:44095154-44095173 | None:intergenic | 30.0% |
GAGCTTGAATAATTCATCAA+TGG | + | chr7_3:44095477-44095496 | Msa1105540:CDS | 30.0% | |
CTTGAATAATTCATCAATGG+CGG | + | chr7_3:44095480-44095499 | Msa1105540:CDS | 30.0% | |
!!! | TTTTTTACGAGTGCGATTTT+TGG | + | chr7_3:44095550-44095569 | Msa1105540:intron | 30.0% |
TGCAGATAATTCTAATCCAA+CGG | - | chr7_3:44095630-44095649 | None:intergenic | 30.0% | |
! | TGCATTTTCAGCTTAAGTAA+TGG | + | chr7_3:44095834-44095853 | Msa1105540:intron | 30.0% |
GAATTATTACGTATCAACCA+TGG | - | chr7_3:44095904-44095923 | None:intergenic | 30.0% | |
TAACGTTCCAGATTCAAATT+AGG | - | chr7_3:44096015-44096034 | None:intergenic | 30.0% | |
CATTTAATTGATCATGTGCA+TGG | + | chr7_3:44096159-44096178 | Msa1105540:intron | 30.0% | |
! | GTATTTTCTTCCTCTGTTTT+TGG | + | chr7_3:44096196-44096215 | Msa1105540:intron | 30.0% |
!!! | AACAGTGGCATTGTTATTTT+TGG | - | chr7_3:44096579-44096598 | None:intergenic | 30.0% |
AATTAATCAGGCAAACACAA+TGG | - | chr7_3:44096603-44096622 | None:intergenic | 30.0% | |
AGCTGGCAAATAAAATATTC+TGG | - | chr7_3:44097169-44097188 | None:intergenic | 30.0% | |
TTTATTATGACCGAAATGGT+CGG | - | chr7_3:44097217-44097236 | None:intergenic | 30.0% | |
! | AGTCATGAAGATTGGATTTT+AGG | - | chr7_3:44097315-44097334 | None:intergenic | 30.0% |
CCACTATACAAGAAATGAAA+GGG | - | chr7_3:44097431-44097450 | None:intergenic | 30.0% | |
ACCACTATACAAGAAATGAA+AGG | - | chr7_3:44097432-44097451 | None:intergenic | 30.0% | |
TACTTTCTCCTATGTTTCTT+TGG | + | chr7_3:44097493-44097512 | Msa1105540:intron | 30.0% | |
TTCGTAAACCAAAGAAACAT+AGG | - | chr7_3:44097504-44097523 | None:intergenic | 30.0% | |
ATCTAAGCTTAATTATGGCT+AGG | + | chr7_3:44097608-44097627 | Msa1105540:intron | 30.0% | |
TCTAAGCTTAATTATGGCTA+GGG | + | chr7_3:44097609-44097628 | Msa1105540:intron | 30.0% | |
CATAAATCTTACACGTTACA+GGG | + | chr7_3:44097781-44097800 | Msa1105540:intron | 30.0% | |
!! | AAACTACAAAGGTATTCATG+TGG | - | chr7_3:44098081-44098100 | None:intergenic | 30.0% |
GTCATTTAATAAGTTCATGG+GGG | - | chr7_3:44098206-44098225 | None:intergenic | 30.0% | |
GGTCATTTAATAAGTTCATG+GGG | - | chr7_3:44098207-44098226 | None:intergenic | 30.0% | |
TACAATAAATGCCAAGTTAG+GGG | - | chr7_3:44098302-44098321 | None:intergenic | 30.0% | |
CTACAATAAATGCCAAGTTA+GGG | - | chr7_3:44098303-44098322 | None:intergenic | 30.0% | |
ACTACAATAAATGCCAAGTT+AGG | - | chr7_3:44098304-44098323 | None:intergenic | 30.0% | |
ATAGAATGATACGGTGTATA+CGG | - | chr7_3:44098370-44098389 | None:intergenic | 30.0% | |
!! | ATTCAGTCCTTTAAGACAAA+CGG | + | chr7_3:44098513-44098532 | Msa1105540:intron | 30.0% |
AAATTACCCGTTTGTCTTAA+AGG | - | chr7_3:44098523-44098542 | None:intergenic | 30.0% | |
GTTACTTAAGATAATGAAGG+AGG | - | chr7_3:44099366-44099385 | None:intergenic | 30.0% | |
AATGATACAGGTTATGCTAT+TGG | + | chr7_3:44099496-44099515 | Msa1105540:intron | 30.0% | |
ATGATACAGGTTATGCTATT+GGG | + | chr7_3:44099497-44099516 | Msa1105540:intron | 30.0% | |
CATGAGAAGTCTACTAAAAT+TGG | + | chr7_3:44099734-44099753 | Msa1105540:intron | 30.0% | |
! | TCTATTTCTTGCACTAACAA+TGG | + | chr7_3:44099868-44099887 | Msa1105540:intron | 30.0% |
TAAACAATGACTATACACAC+TGG | + | chr7_3:44099937-44099956 | Msa1105540:CDS | 30.0% | |
AAACAATGACTATACACACT+GGG | + | chr7_3:44099938-44099957 | Msa1105540:CDS | 30.0% | |
TTGTAAGAATGTTACCTCTT+TGG | - | chr7_3:44100045-44100064 | None:intergenic | 30.0% | |
AAAAAGCTCCATTTAGCAAA+AGG | - | chr7_3:44100219-44100238 | None:intergenic | 30.0% | |
ATCAACAACCAAATGAGTAA+AGG | + | chr7_3:44100384-44100403 | Msa1105540:three_prime_UTR | 30.0% | |
TCAACAACCAAATGAGTAAA+GGG | + | chr7_3:44100385-44100404 | Msa1105540:three_prime_UTR | 30.0% | |
! | GAAAGAAAAGCATAAAGGAA+TGG | + | chr7_3:44100460-44100479 | Msa1105540:three_prime_UTR | 30.0% |
! | TCTTGTCAACAGTTAGATTT+TGG | + | chr7_3:44100597-44100616 | Msa1105540:three_prime_UTR | 30.0% |
! | CTTGTCAACAGTTAGATTTT+GGG | + | chr7_3:44100598-44100617 | Msa1105540:three_prime_UTR | 30.0% |
! | ATGAGAACTGTTGTTGTTAT+TGG | + | chr7_3:44100639-44100658 | Msa1105540:three_prime_UTR | 30.0% |
! | ATTTCCCTCTAATTTTCCAA+GGG | + | chr7_3:44100726-44100745 | Msa1105540:three_prime_UTR | 30.0% |
AGAAAGACAAAGAAACTAAG+GGG | - | chr7_3:44100776-44100795 | None:intergenic | 30.0% | |
!! | TTGATTTGTCCCAAATGAAA+TGG | + | chr7_3:44100867-44100886 | Msa1105540:three_prime_UTR | 30.0% |
! | TGATTTGTCCCAAATGAAAT+GGG | + | chr7_3:44100868-44100887 | Msa1105540:three_prime_UTR | 30.0% |
AAAACAGAGTGAAGCAACAA+TGG | + | chr7_3:44095172-44095191 | Msa1105540:exon | 35.0% | |
! | CATGATGATAGTGTTGTGAA+TGG | + | chr7_3:44095433-44095452 | Msa1105540:intron | 35.0% |
! | ATAATTCATCAATGGCGGAA+AGG | + | chr7_3:44095485-44095504 | Msa1105540:CDS | 35.0% |
TTCTCAAAAGCCAAAAACAG+AGG | - | chr7_3:44096209-44096228 | None:intergenic | 35.0% | |
!!! | TGTTTTTGGCTTTTGAGAAG+AGG | + | chr7_3:44096210-44096229 | Msa1105540:intron | 35.0% |
GCTTAATATGGTCCCATTAA+TGG | + | chr7_3:44096412-44096431 | Msa1105540:intron | 35.0% | |
ACCACAATGCAACCATTAAT+GGG | - | chr7_3:44096427-44096446 | None:intergenic | 35.0% | |
TACTGCAGTGTGGTAATAAA+TGG | - | chr7_3:44096926-44096945 | None:intergenic | 35.0% | |
! | TTTTAAATGCTACTGCAGTG+TGG | - | chr7_3:44096936-44096955 | None:intergenic | 35.0% |
!!! | GAGTCATTTTAATTCTCCTC+TGG | + | chr7_3:44097026-44097045 | Msa1105540:intron | 35.0% |
! | GATTGATTCATTAAGCACCA+TGG | - | chr7_3:44097107-44097126 | None:intergenic | 35.0% |
GTGATTGAAGTCATGAAGAT+TGG | - | chr7_3:44097323-44097342 | None:intergenic | 35.0% | |
CCCTTTCATTTCTTGTATAG+TGG | + | chr7_3:44097428-44097447 | Msa1105540:intron | 35.0% | |
CTAAGCTTAATTATGGCTAG+GGG | + | chr7_3:44097610-44097629 | Msa1105540:intron | 35.0% | |
CCTGTAACGTGTAAGATTTA+TGG | - | chr7_3:44097783-44097802 | None:intergenic | 35.0% | |
CCATAAATCTTACACGTTAC+AGG | + | chr7_3:44097780-44097799 | Msa1105540:intron | 35.0% | |
ATCACTCTTCAGTAGTCAAA+AGG | + | chr7_3:44097837-44097856 | Msa1105540:intron | 35.0% | |
TCACTCTTCAGTAGTCAAAA+GGG | + | chr7_3:44097838-44097857 | Msa1105540:intron | 35.0% | |
! | TTGTGTGTTACTGATTACCT+TGG | + | chr7_3:44097948-44097967 | Msa1105540:intron | 35.0% |
! | TGTGTGTTACTGATTACCTT+GGG | + | chr7_3:44097949-44097968 | Msa1105540:intron | 35.0% |
!!! | ACTCTGTTTTTGGTTCTTTC+AGG | - | chr7_3:44097990-44098009 | None:intergenic | 35.0% |
! | GGGTTTATGAACTCTGTTTT+TGG | - | chr7_3:44098000-44098019 | None:intergenic | 35.0% |
GTTCATAAACCCAGACTATT+AGG | + | chr7_3:44098008-44098027 | Msa1105540:intron | 35.0% | |
GCATGAATTCCTAATAGTCT+GGG | - | chr7_3:44098020-44098039 | None:intergenic | 35.0% | |
TGCATGAATTCCTAATAGTC+TGG | - | chr7_3:44098021-44098040 | None:intergenic | 35.0% | |
AGGATACGGATAGAATGATA+CGG | - | chr7_3:44098379-44098398 | None:intergenic | 35.0% | |
TGGGTCAACAATTAAGGATA+CGG | - | chr7_3:44098393-44098412 | None:intergenic | 35.0% | |
!! | TTCAGTCCTTTAAGACAAAC+GGG | + | chr7_3:44098514-44098533 | Msa1105540:intron | 35.0% |
!!! | AGTTTGAGTTTTTTCTCGTG+TGG | + | chr7_3:44098732-44098751 | Msa1105540:CDS | 35.0% |
!!! | GTTTGAGTTTTTTCTCGTGT+GGG | + | chr7_3:44098733-44098752 | Msa1105540:CDS | 35.0% |
CATGATCAATTCTTGCTTCA+GGG | - | chr7_3:44099000-44099019 | None:intergenic | 35.0% | |
TCATGATCAATTCTTGCTTC+AGG | - | chr7_3:44099001-44099020 | None:intergenic | 35.0% | |
AACAGTTTCAAGACCATAGA+TGG | + | chr7_3:44099020-44099039 | Msa1105540:CDS | 35.0% | |
TCCAAAGGCAATATGAACAT+TGG | - | chr7_3:44099054-44099073 | None:intergenic | 35.0% | |
AATAGTAATGCATGCTCCAA+AGG | - | chr7_3:44099069-44099088 | None:intergenic | 35.0% | |
AATATGACTGGAACCAAAGA+TGG | - | chr7_3:44099219-44099238 | None:intergenic | 35.0% | |
! | TCTTTGGTTCCAGTCATATT+TGG | + | chr7_3:44099219-44099238 | Msa1105540:CDS | 35.0% |
GTGATCAATCCAAATATGAC+TGG | - | chr7_3:44099231-44099250 | None:intergenic | 35.0% | |
!! | TGGTCTTGTTGATGCTATTA+TGG | + | chr7_3:44099274-44099293 | Msa1105540:CDS | 35.0% |
!! | GGTCTTGTTGATGCTATTAT+GGG | + | chr7_3:44099275-44099294 | Msa1105540:CDS | 35.0% |
GTAGTTATTGGAAACGGTAA+TGG | - | chr7_3:44099309-44099328 | None:intergenic | 35.0% | |
GGTGAAGTAGTTATTGGAAA+CGG | - | chr7_3:44099315-44099334 | None:intergenic | 35.0% | |
! | ACCATTGCATACAACCATTT+TGG | + | chr7_3:44099560-44099579 | Msa1105540:CDS | 35.0% |
! | CCATTGCATACAACCATTTT+GGG | + | chr7_3:44099561-44099580 | Msa1105540:CDS | 35.0% |
! | CATTGCATACAACCATTTTG+GGG | + | chr7_3:44099562-44099581 | Msa1105540:CDS | 35.0% |
AATGTTACTGCTAGTTACCT+TGG | - | chr7_3:44099608-44099627 | None:intergenic | 35.0% | |
ACTTCTCATGTCAAATAGAG+AGG | - | chr7_3:44099724-44099743 | None:intergenic | 35.0% | |
ATGACAACTAGACCTCTTTA+TGG | + | chr7_3:44099763-44099782 | Msa1105540:intron | 35.0% | |
! | ATTTGGAATGGACCATAAAG+AGG | - | chr7_3:44099778-44099797 | None:intergenic | 35.0% |
! | AACACTCTTTAGAAGAACAG+AGG | - | chr7_3:44099820-44099839 | None:intergenic | 35.0% |
GAATATTGCAGATGTAGACA+CGG | + | chr7_3:44099900-44099919 | Msa1105540:intron | 35.0% | |
AATATTGCAGATGTAGACAC+GGG | + | chr7_3:44099901-44099920 | Msa1105540:intron | 35.0% | |
TATAGTCATTGTTTACCACG+TGG | - | chr7_3:44099932-44099951 | None:intergenic | 35.0% | |
ATGTTACCTCTTTGGCAAAA+GGG | - | chr7_3:44100037-44100056 | None:intergenic | 35.0% | |
AATGTTACCTCTTTGGCAAA+AGG | - | chr7_3:44100038-44100057 | None:intergenic | 35.0% | |
TTGGAAAATTTGATGTGGAC+AGG | + | chr7_3:44100129-44100148 | Msa1105540:intron | 35.0% | |
GCCAAATCATCTTCATTAGT+CGG | + | chr7_3:44100295-44100314 | Msa1105540:CDS | 35.0% | |
TCCGACTAATGAAGATGATT+TGG | - | chr7_3:44100299-44100318 | None:intergenic | 35.0% | |
GTTCTTTCCCTTTACTCATT+TGG | - | chr7_3:44100395-44100414 | None:intergenic | 35.0% | |
! | GGAGAGAAAGAAAAGCATAA+AGG | + | chr7_3:44100455-44100474 | Msa1105540:three_prime_UTR | 35.0% |
CTGTTGACAAGATAAACAGT+GGG | - | chr7_3:44100589-44100608 | None:intergenic | 35.0% | |
ACTGTTGACAAGATAAACAG+TGG | - | chr7_3:44100590-44100609 | None:intergenic | 35.0% | |
TAATCTCCAAAAGTGAGAGA+TGG | - | chr7_3:44100690-44100709 | None:intergenic | 35.0% | |
!! | CTCTCACTTTTGGAGATTAT+TGG | + | chr7_3:44100691-44100710 | Msa1105540:three_prime_UTR | 35.0% |
! | GATTTCCCTCTAATTTTCCA+AGG | + | chr7_3:44100725-44100744 | Msa1105540:three_prime_UTR | 35.0% |
GAATCCCTTGGAAAATTAGA+GGG | - | chr7_3:44100733-44100752 | None:intergenic | 35.0% | |
TGAATCCCTTGGAAAATTAG+AGG | - | chr7_3:44100734-44100753 | None:intergenic | 35.0% | |
GTGAAGCAACAATGGAGTTA+CGG | + | chr7_3:44095180-44095199 | Msa1105540:exon | 40.0% | |
! | CATAAAGGTGTAGATACCGT+TGG | + | chr7_3:44095611-44095630 | Msa1105540:intron | 40.0% |
GCAAACAGTACTATTTGCGT+CGG | + | chr7_3:44095683-44095702 | Msa1105540:intron | 40.0% | |
TCCCATTAATGGTTGCATTG+TGG | + | chr7_3:44096423-44096442 | Msa1105540:intron | 40.0% | |
GACCACAATGCAACCATTAA+TGG | - | chr7_3:44096428-44096447 | None:intergenic | 40.0% | |
GTATGAGTAATTGCATGGGA+AGG | + | chr7_3:44096895-44096914 | Msa1105540:intron | 40.0% | |
GCAGTGTGGTAATAAATGGT+GGG | - | chr7_3:44096922-44096941 | None:intergenic | 40.0% | |
TGCAGTGTGGTAATAAATGG+TGG | - | chr7_3:44096923-44096942 | None:intergenic | 40.0% | |
GATTCATTAAGCACCATGGA+AGG | - | chr7_3:44097103-44097122 | None:intergenic | 40.0% | |
ATCGCCATGTTCTTTGCATA+TGG | + | chr7_3:44097124-44097143 | Msa1105540:intron | 40.0% | |
TCGCCATGTTCTTTGCATAT+GGG | + | chr7_3:44097125-44097144 | Msa1105540:intron | 40.0% | |
GATCCCATATGCAAAGAACA+TGG | - | chr7_3:44097131-44097150 | None:intergenic | 40.0% | |
ACATTAGCATGTGGTTAAGC+TGG | - | chr7_3:44097186-44097205 | None:intergenic | 40.0% | |
GATCTCAGAACATTAGCATG+TGG | - | chr7_3:44097195-44097214 | None:intergenic | 40.0% | |
CCAAGACATGTGTTTAAGAG+GGG | - | chr7_3:44097455-44097474 | None:intergenic | 40.0% | |
GCCAAGACATGTGTTTAAGA+GGG | - | chr7_3:44097456-44097475 | None:intergenic | 40.0% | |
CTCTTAAACACATGTCTTGG+CGG | + | chr7_3:44097455-44097474 | Msa1105540:intron | 40.0% | |
GGGACACATTTCAGTATTCA+GGG | + | chr7_3:44097630-44097649 | Msa1105540:intron | 40.0% | |
ACAGGCTGTAGAAACTACAA+AGG | - | chr7_3:44098092-44098111 | None:intergenic | 40.0% | |
!!! | TTAGGGGAGATCTAGTTTTG+GGG | - | chr7_3:44098286-44098305 | None:intergenic | 40.0% |
!!! | GTTAGGGGAGATCTAGTTTT+GGG | - | chr7_3:44098287-44098306 | None:intergenic | 40.0% |
!! | AGTTAGGGGAGATCTAGTTT+TGG | - | chr7_3:44098288-44098307 | None:intergenic | 40.0% |
AAACTAGATCTCCCCTAACT+TGG | + | chr7_3:44098288-44098307 | Msa1105540:intron | 40.0% | |
GTCATGTGGGTCAACAATTA+AGG | - | chr7_3:44098399-44098418 | None:intergenic | 40.0% | |
CAATGGCCTATCTTGAATGA+CGG | - | chr7_3:44098946-44098965 | None:intergenic | 40.0% | |
TCATTCAAGATAGGCCATTG+TGG | + | chr7_3:44098946-44098965 | Msa1105540:CDS | 40.0% | |
CTCTTGAACACAATCCACAA+TGG | - | chr7_3:44098963-44098982 | None:intergenic | 40.0% | |
GATTGTGTTCAAGAGAGACA+TGG | + | chr7_3:44098968-44098987 | Msa1105540:CDS | 40.0% | |
GCCAATGTTCATATTGCCTT+TGG | + | chr7_3:44099050-44099069 | Msa1105540:CDS | 40.0% | |
ATCACCAATGTCATCATCCA+TGG | + | chr7_3:44099095-44099114 | Msa1105540:CDS | 40.0% | |
AATCATGGATATGGACACCA+TGG | - | chr7_3:44099115-44099134 | None:intergenic | 40.0% | |
TCGGCTTACAATCATGGATA+TGG | - | chr7_3:44099124-44099143 | None:intergenic | 40.0% | |
CATTGTCCTCCATCCAAAAT+GGG | - | chr7_3:44099177-44099196 | None:intergenic | 40.0% | |
! | GTTATTGGAAACGGTAATGG+CGG | - | chr7_3:44099306-44099325 | None:intergenic | 40.0% |
TCAATTTACCTCGTTGTGGT+GGG | - | chr7_3:44099336-44099355 | None:intergenic | 40.0% | |
AGTCTCAATTTACCTCGTTG+TGG | - | chr7_3:44099340-44099359 | None:intergenic | 40.0% | |
CCCAAAATGGTTGTATGCAA+TGG | - | chr7_3:44099564-44099583 | None:intergenic | 40.0% | |
GAGACACTAGGAATTTGGAA+TGG | - | chr7_3:44099790-44099809 | None:intergenic | 40.0% | |
CAAATTCCTAGTGTCTCAGA+GGG | + | chr7_3:44099793-44099812 | Msa1105540:intron | 40.0% | |
TTGCCTTGGCTGTTAATTGT+GGG | - | chr7_3:44099993-44100012 | None:intergenic | 40.0% | |
! | TTTTTCACTCCATCAGGAAG+AGG | + | chr7_3:44100235-44100254 | Msa1105540:CDS | 40.0% |
TATGCTAGAGCCTCAAGTTT+AGG | + | chr7_3:44100271-44100290 | Msa1105540:CDS | 40.0% | |
ATGCTAGAGCCTCAAGTTTA+GGG | + | chr7_3:44100272-44100291 | Msa1105540:CDS | 40.0% | |
TTAGTCGGAACTTTAACTGC+AGG | + | chr7_3:44100310-44100329 | Msa1105540:CDS | 40.0% | |
!! | CTGGTGTTATTAAATGTCGC+CGG | + | chr7_3:44100335-44100354 | Msa1105540:CDS | 40.0% |
!! | TGGTGTTATTAAATGTCGCC+GGG | + | chr7_3:44100336-44100355 | Msa1105540:CDS | 40.0% |
! | TAGAAGCCATCTCTCACTTT+TGG | + | chr7_3:44100681-44100700 | Msa1105540:three_prime_UTR | 40.0% |
GACAAAGAAACTAAGGGGAA+GGG | - | chr7_3:44100771-44100790 | None:intergenic | 40.0% | |
AGACAAAGAAACTAAGGGGA+AGG | - | chr7_3:44100772-44100791 | None:intergenic | 40.0% | |
TCCCAAATGAAATGGGCAAT+AGG | + | chr7_3:44100875-44100894 | Msa1105540:three_prime_UTR | 40.0% | |
CCCTATTGCCCATTTCATTT+GGG | - | chr7_3:44100879-44100898 | None:intergenic | 40.0% | |
CCCAAATGAAATGGGCAATA+GGG | + | chr7_3:44100876-44100895 | Msa1105540:three_prime_UTR | 40.0% | |
TCCCTATTGCCCATTTCATT+TGG | - | chr7_3:44100880-44100899 | None:intergenic | 40.0% | |
! | AAGAAGCGTGATAGCGAGAA+TGG | - | chr7_3:44095228-44095247 | None:intergenic | 45.0% |
TTAAAATCGGAGCGTACACG+TGG | + | chr7_3:44095588-44095607 | Msa1105540:intron | 45.0% | |
CTGCATGAGATAGCTCAGAA+TGG | + | chr7_3:44095645-44095664 | Msa1105540:intron | 45.0% | |
! | ACTATTTGCGTCGGTCAGAT+CGG | + | chr7_3:44095692-44095711 | Msa1105540:intron | 45.0% |
!! | GCATGCAGTTGATAATCCTG+AGG | + | chr7_3:44095869-44095888 | Msa1105540:CDS | 45.0% |
GGCAAACACAATGGAAACAG+TGG | - | chr7_3:44096594-44096613 | None:intergenic | 45.0% | |
TGAGCAGAGCTTACGATACA+AGG | + | chr7_3:44096748-44096767 | Msa1105540:intron | 45.0% | |
!! | CGTTCTGAAGTTTCCTTCCA+TGG | + | chr7_3:44097087-44097106 | Msa1105540:intron | 45.0% |
!! | GTTCTGAGATCCGACCATTT+CGG | + | chr7_3:44097204-44097223 | Msa1105540:intron | 45.0% |
CCCCTCTTAAACACATGTCT+TGG | + | chr7_3:44097452-44097471 | Msa1105540:intron | 45.0% | |
CGCCAAGACATGTGTTTAAG+AGG | - | chr7_3:44097457-44097476 | None:intergenic | 45.0% | |
GGGGACACATTTCAGTATTC+AGG | + | chr7_3:44097629-44097648 | Msa1105540:intron | 45.0% | |
GTAAGTGATCAAGAGACCCA+AGG | - | chr7_3:44097968-44097987 | None:intergenic | 45.0% | |
GATGCATTGTGCTTGTAGAC+AGG | - | chr7_3:44098110-44098129 | None:intergenic | 45.0% | |
CTACAAGCACAATGCATCTC+TGG | + | chr7_3:44098112-44098131 | Msa1105540:intron | 45.0% | |
!!! | GAGATCTAGTTTTGGGGTGT+CGG | - | chr7_3:44098280-44098299 | None:intergenic | 45.0% |
GTATACGGAATAACGAGGGT+TGG | - | chr7_3:44098355-44098374 | None:intergenic | 45.0% | |
CGGTGTATACGGAATAACGA+GGG | - | chr7_3:44098359-44098378 | None:intergenic | 45.0% | |
ACGGTGTATACGGAATAACG+AGG | - | chr7_3:44098360-44098379 | None:intergenic | 45.0% | |
CAGGACTATACGCAATCACA+CGG | + | chr7_3:44098701-44098720 | Msa1105540:intron | 45.0% | |
!!! | AGTTTTTTCTCGTGTGGGAC+TGG | + | chr7_3:44098738-44098757 | Msa1105540:CDS | 45.0% |
GAAATCCAATGGATGACTGC+TGG | + | chr7_3:44098760-44098779 | Msa1105540:CDS | 45.0% | |
!!! | GCTGATTGTGCCATTGGTTT+TGG | + | chr7_3:44098822-44098841 | Msa1105540:CDS | 45.0% |
AGCATTGCGACCAAAACCAA+TGG | - | chr7_3:44098835-44098854 | None:intergenic | 45.0% | |
!! | GGTTTTGGTCGCAATGCTAT+CGG | + | chr7_3:44098837-44098856 | Msa1105540:CDS | 45.0% |
TATCTTGAATGACGGCGTGA+CGG | - | chr7_3:44098938-44098957 | None:intergenic | 45.0% | |
TTCAAGACCATAGATGGTCG+TGG | + | chr7_3:44099026-44099045 | Msa1105540:CDS | 45.0% | |
GACACCATGGATGATGACAT+TGG | - | chr7_3:44099102-44099121 | None:intergenic | 45.0% | |
ATCCATGATTGTAAGCCGAC+TGG | + | chr7_3:44099125-44099144 | Msa1105540:CDS | 45.0% | |
TCCATGATTGTAAGCCGACT+GGG | + | chr7_3:44099126-44099145 | Msa1105540:CDS | 45.0% | |
TCCTCCATCCAAAATGGGAA+GGG | - | chr7_3:44099172-44099191 | None:intergenic | 45.0% | |
CCATTGTCCTCCATCCAAAA+TGG | - | chr7_3:44099178-44099197 | None:intergenic | 45.0% | |
! | CCATTTTGGATGGAGGACAA+TGG | + | chr7_3:44099175-44099194 | Msa1105540:CDS | 45.0% |
! | GGTGATGGCATTTCCATCTT+TGG | + | chr7_3:44099203-44099222 | Msa1105540:CDS | 45.0% |
TCTCTGTCTAATTGCGCTGA+TGG | + | chr7_3:44099254-44099273 | Msa1105540:CDS | 45.0% | |
!! | GTGGTGGGTGAAGTAGTTAT+TGG | - | chr7_3:44099321-44099340 | None:intergenic | 45.0% |
CTCAATTTACCTCGTTGTGG+TGG | - | chr7_3:44099337-44099356 | None:intergenic | 45.0% | |
!! | TGCATACAACCATTTTGGGG+AGG | + | chr7_3:44099565-44099584 | Msa1105540:CDS | 45.0% |
!! | GCATACAACCATTTTGGGGA+GGG | + | chr7_3:44099566-44099585 | Msa1105540:CDS | 45.0% |
GTCTTATCCAAAGGATGCCA+AGG | + | chr7_3:44099588-44099607 | Msa1105540:CDS | 45.0% | |
CTAGTTACCTTGGCATCCTT+TGG | - | chr7_3:44099598-44099617 | None:intergenic | 45.0% | |
AACTGGACGCTCCTTCAAAA+AGG | - | chr7_3:44099649-44099668 | None:intergenic | 45.0% | |
CAAATAGAGAGGCTCAGCTT+AGG | - | chr7_3:44099713-44099732 | None:intergenic | 45.0% | |
!! | CCTCTGAGACACTAGGAATT+TGG | - | chr7_3:44099795-44099814 | None:intergenic | 45.0% |
CCAAATTCCTAGTGTCTCAG+AGG | + | chr7_3:44099792-44099811 | Msa1105540:intron | 45.0% | |
CACTGGGTGATGTATGCTAT+TGG | + | chr7_3:44099954-44099973 | Msa1105540:CDS | 45.0% | |
TGGGTGATGTATGCTATTGG+AGG | + | chr7_3:44099957-44099976 | Msa1105540:CDS | 45.0% | |
GAACCCACAATTAACAGCCA+AGG | + | chr7_3:44099987-44100006 | Msa1105540:CDS | 45.0% | |
GTTGCCTTGGCTGTTAATTG+TGG | - | chr7_3:44099994-44100013 | None:intergenic | 45.0% | |
!! | TTTGGCAAAAGGGTTCTGAG+GGG | - | chr7_3:44100027-44100046 | None:intergenic | 45.0% |
! | CTTTGGCAAAAGGGTTCTGA+GGG | - | chr7_3:44100028-44100047 | None:intergenic | 45.0% |
TCTTTGGCAAAAGGGTTCTG+AGG | - | chr7_3:44100029-44100048 | None:intergenic | 45.0% | |
! | TCAGAACCCTTTTGCCAAAG+AGG | + | chr7_3:44100028-44100047 | Msa1105540:CDS | 45.0% |
ATGTGGACAGGTGACAAAGA+GGG | + | chr7_3:44100141-44100160 | Msa1105540:intron | 45.0% | |
TGACAAAGAGGGTGGATACA+GGG | + | chr7_3:44100152-44100171 | Msa1105540:CDS | 45.0% | |
ATTCCAACCCTTCCATACTC+CGG | - | chr7_3:44100179-44100198 | None:intergenic | 45.0% | |
GAGTATGGAAGGGTTGGAAT+TGG | + | chr7_3:44100179-44100198 | Msa1105540:CDS | 45.0% | |
TATGGAAGGGTTGGAATTGG+AGG | + | chr7_3:44100182-44100201 | Msa1105540:CDS | 45.0% | |
! | GAGGGAGACCTTTTGCTAAA+TGG | + | chr7_3:44100208-44100227 | Msa1105540:CDS | 45.0% |
!!! | GGAGCTTTTTTCACTCCATC+AGG | + | chr7_3:44100229-44100248 | Msa1105540:CDS | 45.0% |
TGCTAGAGCCTCAAGTTTAG+GGG | + | chr7_3:44100273-44100292 | Msa1105540:CDS | 45.0% | |
! | TGATTTGGCCCCTAAACTTG+AGG | - | chr7_3:44100284-44100303 | None:intergenic | 45.0% |
!! | GGTGTTATTAAATGTCGCCG+GGG | + | chr7_3:44100337-44100356 | Msa1105540:CDS | 45.0% |
TGTATTAACACATGCCACCC+CGG | - | chr7_3:44100357-44100376 | None:intergenic | 45.0% | |
TCTATATGTATCCTCCCCTG+TGG | + | chr7_3:44100793-44100812 | Msa1105540:three_prime_UTR | 45.0% | |
CACACATACACAATCGAGAG+GGG | - | chr7_3:44100828-44100847 | None:intergenic | 45.0% | |
GCACACATACACAATCGAGA+GGG | - | chr7_3:44100829-44100848 | None:intergenic | 45.0% | |
!!! | TAATTATAATTTTAATGAAA+TGG | - | chr7_3:44096798-44096817 | None:intergenic | 5.0% |
!! | TTGATATAAAATTAATTAAA+AGG | - | chr7_3:44099427-44099446 | None:intergenic | 5.0% |
TCCTGAGGAGATTGCTTCCA+TGG | + | chr7_3:44095884-44095903 | Msa1105540:CDS | 50.0% | |
ACCATGGAAGCAATCTCCTC+AGG | - | chr7_3:44095888-44095907 | None:intergenic | 50.0% | |
!!! | TTGACGGTGCCGTTTTTCCA+TGG | - | chr7_3:44096861-44096880 | None:intergenic | 50.0% |
CACATGTCTTGGCGGAGATT+TGG | + | chr7_3:44097463-44097482 | Msa1105540:intron | 50.0% | |
CTGTCCTACATCACCCAACA+AGG | + | chr7_3:44098046-44098065 | Msa1105540:intron | 50.0% | |
TCCTACATCACCCAACAAGG+TGG | + | chr7_3:44098049-44098068 | Msa1105540:intron | 50.0% | |
CCTACATCACCCAACAAGGT+GGG | + | chr7_3:44098050-44098069 | Msa1105540:intron | 50.0% | |
CTACATCACCCAACAAGGTG+GGG | + | chr7_3:44098051-44098070 | Msa1105540:intron | 50.0% | |
!!! | ATCTAGTTTTGGGGTGTCGG+TGG | - | chr7_3:44098277-44098296 | None:intergenic | 50.0% |
TGTTGAGGGATGAGACTGGT+GGG | - | chr7_3:44098425-44098444 | None:intergenic | 50.0% | |
TGTCTGTTGAGGGATGAGAC+TGG | - | chr7_3:44098429-44098448 | None:intergenic | 50.0% | |
TACGCAATCACACGGAGAGA+AGG | + | chr7_3:44098709-44098728 | Msa1105540:CDS | 50.0% | |
GTGTGGGACTGGAAATCCAA+TGG | + | chr7_3:44098749-44098768 | Msa1105540:CDS | 50.0% | |
AATCAGCCAACCGCTTTCTG+CGG | - | chr7_3:44098809-44098828 | None:intergenic | 50.0% | |
TTTGGTCGCAATGCTATCGG+TGG | + | chr7_3:44098840-44098859 | Msa1105540:CDS | 50.0% | |
CAACGTAGTACCTTCCATCG+CGG | - | chr7_3:44098866-44098885 | None:intergenic | 50.0% | |
GTCACGCCGTCATTCAAGAT+AGG | + | chr7_3:44098937-44098956 | Msa1105540:CDS | 50.0% | |
ATTGGCACCACGACCATCTA+TGG | - | chr7_3:44099036-44099055 | None:intergenic | 50.0% | |
! | TCCCAGTCGGCTTACAATCA+TGG | - | chr7_3:44099130-44099149 | None:intergenic | 50.0% |
TAAGCCGACTGGGAATGCTA+TGG | + | chr7_3:44099136-44099155 | Msa1105540:CDS | 50.0% | |
CGAACCATAGCATTCCCAGT+CGG | - | chr7_3:44099143-44099162 | None:intergenic | 50.0% | |
CCTCCATCCAAAATGGGAAG+GGG | - | chr7_3:44099171-44099190 | None:intergenic | 50.0% | |
GTCCTCCATCCAAAATGGGA+AGG | - | chr7_3:44099173-44099192 | None:intergenic | 50.0% | |
! | AGGACAATGGCTGATGGTGA+TGG | + | chr7_3:44099188-44099207 | Msa1105540:CDS | 50.0% |
! | ATTGGAAACGGTAATGGCGG+TGG | - | chr7_3:44099303-44099322 | None:intergenic | 50.0% |
GGATAAGACCCTCCCCAAAA+TGG | - | chr7_3:44099577-44099596 | None:intergenic | 50.0% | |
! | TTGGGGAGGGTCTTATCCAA+AGG | + | chr7_3:44099579-44099598 | Msa1105540:CDS | 50.0% |
TAGACACGGGTATTTCCACG+TGG | + | chr7_3:44099914-44099933 | Msa1105540:CDS | 50.0% | |
GATGTGGACAGGTGACAAAG+AGG | + | chr7_3:44100140-44100159 | Msa1105540:intron | 50.0% | |
GTGACAAAGAGGGTGGATAC+AGG | + | chr7_3:44100151-44100170 | Msa1105540:CDS | 50.0% | |
GGTTGGAATTGGAGGTCTGA+GGG | + | chr7_3:44100190-44100209 | Msa1105540:CDS | 50.0% | |
GGAACTTTAACTGCAGGTGC+TGG | + | chr7_3:44100316-44100335 | Msa1105540:CDS | 50.0% | |
GTTATTAAATGTCGCCGGGG+TGG | + | chr7_3:44100340-44100359 | Msa1105540:CDS | 50.0% | |
! | AGGGGTACACTATTCCACAG+GGG | - | chr7_3:44100810-44100829 | None:intergenic | 50.0% |
! | GAGGGGTACACTATTCCACA+GGG | - | chr7_3:44100811-44100830 | None:intergenic | 50.0% |
! | AGAGGGGTACACTATTCCAC+AGG | - | chr7_3:44100812-44100831 | None:intergenic | 50.0% |
GGCACACATACACAATCGAG+AGG | - | chr7_3:44100830-44100849 | None:intergenic | 50.0% | |
GGAGCGTACACGTGGCATAA+AGG | + | chr7_3:44095596-44095615 | Msa1105540:intron | 55.0% | |
TCAGCACAGTCTGACCCACT+TGG | + | chr7_3:44096272-44096291 | Msa1105540:intron | 55.0% | |
CCCACCTTGTTGGGTGATGT+AGG | - | chr7_3:44098053-44098072 | None:intergenic | 55.0% | |
GTGGCTTACCCCACCTTGTT+GGG | - | chr7_3:44098062-44098081 | None:intergenic | 55.0% | |
TGTGGCTTACCCCACCTTGT+TGG | - | chr7_3:44098063-44098082 | None:intergenic | 55.0% | |
CTGTTGAGGGATGAGACTGG+TGG | - | chr7_3:44098426-44098445 | None:intergenic | 55.0% | |
TTTGGTACCGCCGCAGAAAG+CGG | + | chr7_3:44098796-44098815 | Msa1105540:CDS | 55.0% | |
! | CGGTTGGCTGATTGTGCCAT+TGG | + | chr7_3:44098816-44098835 | Msa1105540:CDS | 55.0% |
AGTGCCAGGTCTTGGGTTCA+CGG | - | chr7_3:44098913-44098932 | None:intergenic | 55.0% | |
! | CGTAGCTCCCCTTCCCATTT+TGG | + | chr7_3:44099161-44099180 | Msa1105540:CDS | 55.0% |
! | GCTCCCCTTCCCATTTTGGA+TGG | + | chr7_3:44099165-44099184 | Msa1105540:CDS | 55.0% |
! | CCCCTTCCCATTTTGGATGG+AGG | + | chr7_3:44099168-44099187 | Msa1105540:CDS | 55.0% |
GGATGGAGGACAATGGCTGA+TGG | + | chr7_3:44099182-44099201 | Msa1105540:CDS | 55.0% | |
CTACTTCACCCACCACAACG+AGG | + | chr7_3:44099325-44099344 | Msa1105540:CDS | 55.0% | |
!! | AGAGGTCCCTCTGAGACACT+AGG | - | chr7_3:44099802-44099821 | None:intergenic | 55.0% |
! | GGGCAAGGTATCTGTTGCCT+TGG | - | chr7_3:44100007-44100026 | None:intergenic | 55.0% |
!! | CAAAAGGGTTCTGAGGGGCA+AGG | - | chr7_3:44100022-44100041 | None:intergenic | 55.0% |
TGGACAGGTGACAAAGAGGG+TGG | + | chr7_3:44100144-44100163 | Msa1105540:intron | 55.0% | |
AAGAGGGTGGATACAGGGTC+CGG | + | chr7_3:44100157-44100176 | Msa1105540:CDS | 55.0% | |
TGGATACAGGGTCCGGAGTA+TGG | + | chr7_3:44100164-44100183 | Msa1105540:CDS | 55.0% | |
TACAGGGTCCGGAGTATGGA+AGG | + | chr7_3:44100168-44100187 | Msa1105540:CDS | 55.0% | |
ACAGGGTCCGGAGTATGGAA+GGG | + | chr7_3:44100169-44100188 | Msa1105540:CDS | 55.0% | |
GGGTTGGAATTGGAGGTCTG+AGG | + | chr7_3:44100189-44100208 | Msa1105540:CDS | 55.0% | |
TCCATCAGGAAGAGGAGCTG+CGG | + | chr7_3:44100243-44100262 | Msa1105540:CDS | 55.0% | |
GGTACACTATTCCACAGGGG+AGG | - | chr7_3:44100807-44100826 | None:intergenic | 55.0% | |
! | GACTGGTGGGTCGGTCATGT+GGG | - | chr7_3:44098412-44098431 | None:intergenic | 60.0% |
! | AGACTGGTGGGTCGGTCATG+TGG | - | chr7_3:44098413-44098432 | None:intergenic | 60.0% |
! | GAGGGATGAGACTGGTGGGT+CGG | - | chr7_3:44098421-44098440 | None:intergenic | 60.0% |
CAGCGCCAGCAGTCATCCAT+TGG | - | chr7_3:44098768-44098787 | None:intergenic | 60.0% | |
GCTGGCGCTGTGACAAGCTT+TGG | + | chr7_3:44098778-44098797 | Msa1105540:CDS | 60.0% | |
AATGCTATCGGTGGCCGCGA+TGG | + | chr7_3:44098849-44098868 | Msa1105540:CDS | 60.0% | |
TCACGGGGTCGTCGTCTCTT+GGG | - | chr7_3:44098896-44098915 | None:intergenic | 60.0% | |
TTCACGGGGTCGTCGTCTCT+TGG | - | chr7_3:44098897-44098916 | None:intergenic | 60.0% | |
TGCCAGGTCTTGGGTTCACG+GGG | - | chr7_3:44098911-44098930 | None:intergenic | 60.0% | |
GTGCCAGGTCTTGGGTTCAC+GGG | - | chr7_3:44098912-44098931 | None:intergenic | 60.0% | |
!! | GACGGAGAGTGCCAGGTCTT+GGG | - | chr7_3:44098920-44098939 | None:intergenic | 60.0% |
!! | TGACGGAGAGTGCCAGGTCT+TGG | - | chr7_3:44098921-44098940 | None:intergenic | 60.0% |
GGTCCGGAGTATGGAAGGGT+TGG | + | chr7_3:44100173-44100192 | Msa1105540:CDS | 60.0% | |
GTACCGCCGCAGAAAGCGGT+TGG | + | chr7_3:44098800-44098819 | Msa1105540:CDS | 65.0% | |
CAGCCAACCGCTTTCTGCGG+CGG | - | chr7_3:44098806-44098825 | None:intergenic | 65.0% | |
CTATCGGTGGCCGCGATGGA+AGG | + | chr7_3:44098853-44098872 | Msa1105540:CDS | 65.0% | |
GACCCCGTGAACCCAAGACC+TGG | + | chr7_3:44098906-44098925 | Msa1105540:CDS | 65.0% | |
GCCGCAGCTCCTCTTCCTGA+TGG | - | chr7_3:44100247-44100266 | None:intergenic | 65.0% | |
!! | ACGGCGTGACGGAGAGTGCC+AGG | - | chr7_3:44098927-44098946 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 44095105 | 44100932 | 44095105 | ID=Msa1105540;Name=Msa1105540 |
chr7_3 | mRNA | 44095105 | 44100932 | 44095105 | ID=Msa1105540-mRNA-1;Parent=Msa1105540;Name=Msa1105540-mRNA-1;_AED=0.12;_eAED=0.12;_QI=86|1|1|1|1|1|7|560|444 |
chr7_3 | exon | 44095105 | 44095285 | 44095105 | ID=Msa1105540-mRNA-1:exon:9105;Parent=Msa1105540-mRNA-1 |
chr7_3 | exon | 44095444 | 44095506 | 44095444 | ID=Msa1105540-mRNA-1:exon:9106;Parent=Msa1105540-mRNA-1 |
chr7_3 | exon | 44095845 | 44095913 | 44095845 | ID=Msa1105540-mRNA-1:exon:9107;Parent=Msa1105540-mRNA-1 |
chr7_3 | exon | 44098704 | 44099346 | 44098704 | ID=Msa1105540-mRNA-1:exon:9108;Parent=Msa1105540-mRNA-1 |
chr7_3 | exon | 44099506 | 44099609 | 44099506 | ID=Msa1105540-mRNA-1:exon:9109;Parent=Msa1105540-mRNA-1 |
chr7_3 | exon | 44099911 | 44100049 | 44099911 | ID=Msa1105540-mRNA-1:exon:9110;Parent=Msa1105540-mRNA-1 |
chr7_3 | exon | 44100151 | 44100932 | 44100151 | ID=Msa1105540-mRNA-1:exon:9111;Parent=Msa1105540-mRNA-1 |
chr7_3 | five_prime_UTR | 44095105 | 44095190 | 44095105 | ID=Msa1105540-mRNA-1:five_prime_utr;Parent=Msa1105540-mRNA-1 |
chr7_3 | CDS | 44095191 | 44095285 | 44095191 | ID=Msa1105540-mRNA-1:cds;Parent=Msa1105540-mRNA-1 |
chr7_3 | CDS | 44095444 | 44095506 | 44095444 | ID=Msa1105540-mRNA-1:cds;Parent=Msa1105540-mRNA-1 |
chr7_3 | CDS | 44095845 | 44095913 | 44095845 | ID=Msa1105540-mRNA-1:cds;Parent=Msa1105540-mRNA-1 |
chr7_3 | CDS | 44098704 | 44099346 | 44098704 | ID=Msa1105540-mRNA-1:cds;Parent=Msa1105540-mRNA-1 |
chr7_3 | CDS | 44099506 | 44099609 | 44099506 | ID=Msa1105540-mRNA-1:cds;Parent=Msa1105540-mRNA-1 |
chr7_3 | CDS | 44099911 | 44100049 | 44099911 | ID=Msa1105540-mRNA-1:cds;Parent=Msa1105540-mRNA-1 |
chr7_3 | CDS | 44100151 | 44100372 | 44100151 | ID=Msa1105540-mRNA-1:cds;Parent=Msa1105540-mRNA-1 |
chr7_3 | three_prime_UTR | 44100373 | 44100932 | 44100373 | ID=Msa1105540-mRNA-1:three_prime_utr;Parent=Msa1105540-mRNA-1 |
Gene Sequence |
Protein sequence |