Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198250 | sp|P0CB23|Y4862_ARATH | 45.965 | 570 | 292 | 5 | 1 | 569 | 1 | 555 | 2.80e-126 | 405 |
| Msa1198250 | sp|P0CB23|Y4862_ARATH | 42.991 | 214 | 78 | 2 | 481 | 666 | 634 | 831 | 8.20e-30 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198250 | A0A072TTF3 | 92.438 | 767 | 57 | 1 | 1 | 767 | 1 | 766 | 0.0 | 1385 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001940 | Msa1198250 | 0.814391 | 1.577891e-51 | -8.615850e-47 |
| Msa0043470 | Msa1198250 | 0.801536 | 8.595543e-49 | -8.615850e-47 |
| Msa0094780 | Msa1198250 | 0.818645 | 1.759504e-52 | -8.615850e-47 |
| Msa0097770 | Msa1198250 | 0.813900 | 2.025681e-51 | -8.615850e-47 |
| Msa0658640 | Msa1198250 | 0.806666 | 7.364629e-50 | -8.615850e-47 |
| Msa0733390 | Msa1198250 | 0.804909 | 1.722761e-49 | -8.615850e-47 |
| Msa0739730 | Msa1198250 | 0.810689 | 1.017167e-50 | -8.615850e-47 |
| Msa0780270 | Msa1198250 | 0.807761 | 4.315400e-50 | -8.615850e-47 |
| Msa0795870 | Msa1198250 | 0.833193 | 6.138888e-56 | -8.615850e-47 |
| Msa0824450 | Msa1198250 | 0.809339 | 1.986754e-50 | -8.615850e-47 |
| Msa0826130 | Msa1198250 | 0.813094 | 3.046388e-51 | -8.615850e-47 |
| Msa0833650 | Msa1198250 | 0.837942 | 3.858904e-57 | -8.615850e-47 |
| Msa0136650 | Msa1198250 | 0.801232 | 9.924320e-49 | -8.615850e-47 |
| Msa0223210 | Msa1198250 | 0.816472 | 5.435231e-52 | -8.615850e-47 |
| Msa0225100 | Msa1198250 | 0.806348 | 8.595115e-50 | -8.615850e-47 |
| Msa0225860 | Msa1198250 | 0.844094 | 9.352151e-59 | -8.615850e-47 |
| Msa0371170 | Msa1198250 | 0.806501 | 7.976744e-50 | -8.615850e-47 |
| Msa0378720 | Msa1198250 | 0.825587 | 4.321807e-54 | -8.615850e-47 |
| Msa0428370 | Msa1198250 | 0.807545 | 4.798118e-50 | -8.615850e-47 |
| Msa0467430 | Msa1198250 | 0.806680 | 7.312793e-50 | -8.615850e-47 |
| Msa0474730 | Msa1198250 | 0.820538 | 6.506564e-53 | -8.615850e-47 |
| Msa1019430 | Msa1198250 | 0.840640 | 7.698466e-58 | -8.615850e-47 |
| Msa1019470 | Msa1198250 | 0.829402 | 5.251022e-55 | -8.615850e-47 |
| Msa1050910 | Msa1198250 | 0.802018 | 6.846746e-49 | -8.615850e-47 |
| Msa1078170 | Msa1198250 | 0.804214 | 2.404612e-49 | -8.615850e-47 |
| Msa0254790 | Msa1198250 | 0.800257 | 1.568750e-48 | -8.615850e-47 |
| Msa0260510 | Msa1198250 | 0.804325 | 2.280431e-49 | -8.615850e-47 |
| Msa0264400 | Msa1198250 | 0.803224 | 3.859629e-49 | -8.615850e-47 |
| Msa0265850 | Msa1198250 | 0.810863 | 9.330636e-51 | -8.615850e-47 |
| Msa0287740 | Msa1198250 | 0.803823 | 2.900062e-49 | -8.615850e-47 |
| Msa0300270 | Msa1198250 | 0.816729 | 4.759597e-52 | -8.615850e-47 |
| Msa0300320 | Msa1198250 | 0.826243 | 3.018432e-54 | -8.615850e-47 |
| Msa0306370 | Msa1198250 | 0.826316 | 2.900234e-54 | -8.615850e-47 |
| Msa0310850 | Msa1198250 | 0.800602 | 1.334578e-48 | -8.615850e-47 |
| Msa0330380 | Msa1198250 | 0.830755 | 2.456400e-55 | -8.615850e-47 |
| Msa0339500 | Msa1198250 | 0.806921 | 6.502540e-50 | -8.615850e-47 |
| Msa0339650 | Msa1198250 | 0.810201 | 1.296574e-50 | -8.615850e-47 |
| Msa0340500 | Msa1198250 | 0.805823 | 1.108463e-49 | -8.615850e-47 |
| Msa1132840 | Msa1198250 | 0.840883 | 6.649236e-58 | -8.615850e-47 |
| Msa1186020 | Msa1198250 | 0.806474 | 8.083066e-50 | -8.615850e-47 |
| Msa1198250 | Msa1200890 | 0.807435 | 5.060798e-50 | -8.615850e-47 |
| Msa1198250 | Msa1208160 | 0.831216 | 1.893301e-55 | -8.615850e-47 |
| Msa1198250 | Msa1208430 | 0.806325 | 8.689782e-50 | -8.615850e-47 |
| Msa1198250 | Msa1209450 | 0.808999 | 2.349546e-50 | -8.615850e-47 |
| Msa1198250 | Msa1226520 | 0.809715 | 1.650050e-50 | -8.615850e-47 |
| Msa1198250 | Msa1228200 | 0.806055 | 9.903636e-50 | -8.615850e-47 |
| Msa1198250 | Msa1251930 | 0.801094 | 1.058947e-48 | -8.615850e-47 |
| Msa1198250 | Msa1253550 | 0.809369 | 1.957474e-50 | -8.615850e-47 |
| Msa1198250 | Msa1267900 | 0.825704 | 4.053103e-54 | -8.615850e-47 |
| Msa1198250 | Msa1298370 | 0.816867 | 4.431893e-52 | -8.615850e-47 |
| Msa1198250 | Msa1298810 | 0.809703 | 1.659380e-50 | -8.615850e-47 |
| Msa1198250 | Msa1303250 | 0.800976 | 1.119231e-48 | -8.615850e-47 |
| Msa1198250 | Msa1320670 | 0.820435 | 6.869257e-53 | -8.615850e-47 |
| Msa1198250 | Msa1330420 | 0.816995 | 4.146891e-52 | -8.615850e-47 |
| Msa1198250 | Msa1361400 | 0.802778 | 4.772839e-49 | -8.615850e-47 |
| Msa1198250 | Msa1392580 | 0.812223 | 4.724177e-51 | -8.615850e-47 |
| Msa1198250 | Msa1397400 | 0.811728 | 6.055634e-51 | -8.615850e-47 |
| Msa1198250 | Msa1420950 | 0.816659 | 4.933446e-52 | -8.615850e-47 |
| Msa1198250 | Msa1427200 | 0.826564 | 2.530935e-54 | -8.615850e-47 |
| Msa1198250 | Msa1440880 | 0.834106 | 3.629966e-56 | -8.615850e-47 |
| Msa1198250 | Msa1446810 | 0.805226 | 1.478574e-49 | -8.615850e-47 |
| Msa1198250 | Msa1451160 | 0.805296 | 1.429481e-49 | -8.615850e-47 |
| Msa0483100 | Msa1198250 | 0.817018 | 4.098863e-52 | -8.615850e-47 |
| Msa0484380 | Msa1198250 | 0.811061 | 8.451072e-51 | -8.615850e-47 |
| Msa0546500 | Msa1198250 | 0.802169 | 6.372651e-49 | -8.615850e-47 |
| Msa0580370 | Msa1198250 | 0.838962 | 2.105020e-57 | -8.615850e-47 |
| Msa0581470 | Msa1198250 | 0.803814 | 2.912258e-49 | -8.615850e-47 |
| Msa0600930 | Msa1198250 | 0.803261 | 3.792442e-49 | -8.615850e-47 |
| Msa0861510 | Msa1198250 | 0.834571 | 2.775252e-56 | -8.615850e-47 |
| Msa0861530 | Msa1198250 | 0.829573 | 4.772923e-55 | -8.615850e-47 |
| Msa0861600 | Msa1198250 | 0.836036 | 1.183698e-56 | -8.615850e-47 |
| Msa0910430 | Msa1198250 | 0.800479 | 1.413974e-48 | -8.615850e-47 |
| Msa0967380 | Msa1198250 | 0.832926 | 7.152152e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198250 | MtrunA17_Chr8g0367551 | 92.438 | 767 | 57 | 1 | 1 | 767 | 1 | 766 | 0.0 | 1385 |
| Msa1198250 | MtrunA17_Chr2g0279621 | 33.994 | 656 | 367 | 8 | 5 | 646 | 6 | 609 | 7.17e-85 | 288 |
| Msa1198250 | MtrunA17_Chr5g0412231 | 54.237 | 236 | 92 | 3 | 206 | 441 | 95 | 314 | 1.39e-61 | 220 |
| Msa1198250 | MtrunA17_Chr5g0412231 | 51.754 | 114 | 52 | 2 | 1 | 114 | 1 | 111 | 3.15e-18 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198250 | AT4G38062.1 | 45.965 | 570 | 292 | 5 | 1 | 569 | 1 | 555 | 2.84e-127 | 405 |
| Msa1198250 | AT4G38062.1 | 42.991 | 214 | 78 | 2 | 481 | 666 | 634 | 831 | 8.33e-31 | 130 |
Find 103 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCCTTCACTTAGCTCTT+TGG | 0.199226 | 8_1:-49598831 | None:intergenic |
| TGGAATTTGAATTGCAAATA+TGG | 0.213248 | 8_1:+49600100 | Msa1198250:CDS |
| CAGTTCTTTGTTGCATTCAT+TGG | 0.227093 | 8_1:-49599899 | None:intergenic |
| ATCCATCTCATCTTTGTAAT+TGG | 0.243577 | 8_1:-49599686 | None:intergenic |
| CTGATCAAGCCTCTCAGATT+TGG | 0.276878 | 8_1:-49598489 | None:intergenic |
| GAAGCATATGAGAAACTTAA+AGG | 0.282739 | 8_1:+49598938 | Msa1198250:CDS |
| TGGACTTTGCTTCTTGTGTT+TGG | 0.299210 | 8_1:-49598469 | None:intergenic |
| CTTGTCATTTGCTTCCTCTA+AGG | 0.301965 | 8_1:-49598693 | None:intergenic |
| CTTGCTCTAGCTTCTCAGTT+TGG | 0.327221 | 8_1:-49599300 | None:intergenic |
| TGCTGGAATGAATTTGAAAA+AGG | 0.359780 | 8_1:+49600506 | Msa1198250:CDS |
| CTTAGAAAGGGAAAATTTGT+TGG | 0.405002 | 8_1:+49600380 | Msa1198250:CDS |
| AGATGGCATGTTTCAGAAGT+TGG | 0.412491 | 8_1:+49598850 | Msa1198250:CDS |
| AGCAAGAAAATCAAGAGTTA+AGG | 0.426164 | 8_1:+49599317 | Msa1198250:CDS |
| CTAGTTCTTTACGCATCAAA+TGG | 0.429303 | 8_1:-49600164 | None:intergenic |
| CAATTCTTTGTTGCATCCAT+AGG | 0.430141 | 8_1:-49599848 | None:intergenic |
| AGACATTGCTATCAATGAAC+TGG | 0.433101 | 8_1:+49600050 | Msa1198250:CDS |
| ACTTTCTTTATCCTACTAGT+AGG | 0.441188 | 8_1:-49600576 | None:intergenic |
| AGGGTTGGTGTTGGCCTTAG+AGG | 0.442460 | 8_1:+49598679 | Msa1198250:CDS |
| AATTTGCGAAAGAAGTGAAA+TGG | 0.449523 | 8_1:+49600080 | Msa1198250:CDS |
| GGAAAAGGTTTATGAAGAGT+TGG | 0.460705 | 8_1:+49598349 | Msa1198250:CDS |
| TCTGCAAAACCTTCTCTTCG+AGG | 0.466436 | 8_1:-49599981 | None:intergenic |
| TGATACAAGATCTCCATTCA+AGG | 0.467451 | 8_1:+49600611 | Msa1198250:CDS |
| CAAATCTGAGAGGCTTGATC+AGG | 0.467554 | 8_1:+49598490 | Msa1198250:CDS |
| TGGAGATCTTGTATCAGAAA+TGG | 0.469819 | 8_1:-49600604 | None:intergenic |
| CGACAAAACTGTCCTTAGAA+AGG | 0.470086 | 8_1:+49600367 | Msa1198250:CDS |
| TTCAAGTTTCTCCTACTAGT+AGG | 0.481763 | 8_1:+49600565 | Msa1198250:CDS |
| TTTGGTTGACTTGTGTATCA+AGG | 0.481934 | 8_1:-49598451 | None:intergenic |
| AACTGCAGAACGAACTTGAT+AGG | 0.483851 | 8_1:+49599917 | Msa1198250:CDS |
| CAAGGCTAGAGAGGCCGAAT+GGG | 0.489784 | 8_1:+49599462 | Msa1198250:CDS |
| TGAGACAAGGTTGTTGAATG+AGG | 0.490827 | 8_1:+49599603 | Msa1198250:CDS |
| TGTGATTGCAAAAGGCACTA+TGG | 0.490962 | 8_1:+49600317 | Msa1198250:CDS |
| CTACTGTTTAGCTCCTTGAA+TGG | 0.494111 | 8_1:-49600624 | None:intergenic |
| GAATTTCTGAGGCTCAGTTA+AGG | 0.498631 | 8_1:+49599659 | Msa1198250:CDS |
| TTCTATCCGAGAGTCCCATT+CGG | 0.501380 | 8_1:-49599476 | None:intergenic |
| CTACTTAACAAAGAGAAAGA+AGG | 0.503263 | 8_1:+49599709 | Msa1198250:CDS |
| TTTCTACATGAGCAAGAGCT+TGG | 0.503793 | 8_1:-49599096 | None:intergenic |
| TGATAGGTACAAGGAAATGC+TGG | 0.504708 | 8_1:+49599933 | Msa1198250:CDS |
| ATGAGGAAGATCGAGTCCTA+TGG | 0.506973 | 8_1:+49599832 | Msa1198250:CDS |
| CTACATGAGCAAGAGCTTGG+TGG | 0.508529 | 8_1:-49599093 | None:intergenic |
| AATGGGAAGATGAGAAAAGA+GGG | 0.508861 | 8_1:+49598660 | Msa1198250:CDS |
| TGTCGAGGAGCTTCAGAAAG+AGG | 0.510883 | 8_1:+49600248 | Msa1198250:CDS |
| GAATATGTGTCAGTCTGAGC+TGG | 0.520872 | 8_1:+49599516 | Msa1198250:CDS |
| GAGAGTGTTGTGATTGCAAA+AGG | 0.521173 | 8_1:+49600309 | Msa1198250:CDS |
| GACAAAACTGTCCTTAGAAA+GGG | 0.529083 | 8_1:+49600368 | Msa1198250:CDS |
| CTTCTTGCACAAGTAGATGT+TGG | 0.531012 | 8_1:+49600195 | Msa1198250:CDS |
| CTTGCATATTCTCTTTCACA+TGG | 0.533808 | 8_1:-49600542 | None:intergenic |
| TACTTAACAAAGAGAAAGAA+GGG | 0.534851 | 8_1:+49599710 | Msa1198250:CDS |
| TTGGTTGACTTGTGTATCAA+GGG | 0.536874 | 8_1:-49598450 | None:intergenic |
| AGCTTTGAGATGTTTGATGA+TGG | 0.538214 | 8_1:-49598594 | None:intergenic |
| GGAAGCTAAAATTGCAGCAA+TGG | 0.539420 | 8_1:+49599537 | Msa1198250:CDS |
| GGAAGAGCTTCAGATGGAGT+TGG | 0.539655 | 8_1:+49599558 | Msa1198250:CDS |
| TGAAGAGTTGGATGAAGCAA+AGG | 0.545058 | 8_1:+49598361 | Msa1198250:CDS |
| AGCATCATGGTACTCACTAC+CGG | 0.547028 | 8_1:-49599176 | None:intergenic |
| GATGTCACTCAGAGAACTAC+AGG | 0.547837 | 8_1:+49599339 | Msa1198250:CDS |
| ATGAGCAAGAGCTTGGTGGC+AGG | 0.548176 | 8_1:-49599089 | None:intergenic |
| GGTTGCGAAGCAGAAGTGTT+CGG | 0.548274 | 8_1:+49598784 | Msa1198250:CDS |
| TCAAGGCTAGAGAGGCCGAA+TGG | 0.550189 | 8_1:+49599461 | Msa1198250:CDS |
| AAGCCTGAAAAGTTGTCTAT+CGG | 0.551031 | 8_1:+49598763 | Msa1198250:CDS |
| AAATGGGAAGATGAGAAAAG+AGG | 0.553568 | 8_1:+49598659 | Msa1198250:CDS |
| CATCAAGCAAGAGAAAGATA+AGG | 0.559133 | 8_1:+49600224 | Msa1198250:CDS |
| AGATCAATTAAAGTGGAAGA+AGG | 0.559173 | 8_1:+49598895 | Msa1198250:CDS |
| TTAAGTCTAGCAAGAAAGAG+TGG | 0.559822 | 8_1:+49598966 | Msa1198250:CDS |
| AGTTGGGAGATCAATTAAAG+TGG | 0.560377 | 8_1:+49598888 | Msa1198250:CDS |
| TGCCAATTACAAAGATGAGA+TGG | 0.561343 | 8_1:+49599684 | Msa1198250:CDS |
| ATATTCACTGAAAACAAAAG+AGG | 0.564634 | 8_1:+49599255 | Msa1198250:CDS |
| TCTCGGATAGAACAATTGAC+TGG | 0.567347 | 8_1:+49599487 | Msa1198250:CDS |
| CATGTTTCAGAAGTTGGAGG+AGG | 0.572744 | 8_1:+49598856 | Msa1198250:CDS |
| GAGAGGCCGAATGGGACTCT+CGG | 0.575986 | 8_1:+49599470 | Msa1198250:CDS |
| ATTCAACAACCTTGTCTCAA+CGG | 0.580172 | 8_1:-49599599 | None:intergenic |
| TCAGCAGATCCTCGAAGAGA+AGG | 0.582418 | 8_1:+49599972 | Msa1198250:CDS |
| GAAGCTCAAATTCAAGAAGC+AGG | 0.583273 | 8_1:+49599361 | Msa1198250:CDS |
| AGGCTGCAGCTTGATAATGC+CGG | 0.584211 | 8_1:+49599157 | Msa1198250:CDS |
| GTTTGATAGCCGTTGAGACA+AGG | 0.586699 | 8_1:+49599590 | Msa1198250:CDS |
| ACTATTCGCAGTCGAAGTTG+AGG | 0.588490 | 8_1:+49599389 | Msa1198250:CDS |
| TAGCAAGAAAGAGTGGGAGA+TGG | 0.589935 | 8_1:+49598973 | Msa1198250:CDS |
| TCAGGAACTGCTTCAAAAGA+CGG | 0.590245 | 8_1:+49598508 | Msa1198250:CDS |
| AGAGAAAGATAAGGCTGTCG+AGG | 0.591590 | 8_1:+49600233 | Msa1198250:CDS |
| TAAGTCTAGCAAGAAAGAGT+GGG | 0.595787 | 8_1:+49598967 | Msa1198250:CDS |
| TGAGAAAAGAGGGTTGGTGT+TGG | 0.596204 | 8_1:+49598670 | Msa1198250:CDS |
| CTCTCTAGCCTTGAGAGTCA+AGG | 0.596458 | 8_1:-49599452 | None:intergenic |
| GGCTGAGATTGAGAAACTCA+AGG | 0.598448 | 8_1:+49598382 | Msa1198250:CDS |
| CTTGACTCTCAAGGCTAGAG+AGG | 0.602786 | 8_1:+49599453 | Msa1198250:CDS |
| CGAGCTGTAGTCTAGCATCA+TGG | 0.605209 | 8_1:-49599189 | None:intergenic |
| GAGGGACATGTTGAGAAGCA+TGG | 0.610311 | 8_1:+49600461 | Msa1198250:CDS |
| TGGCATGTTTCAGAAGTTGG+AGG | 0.611430 | 8_1:+49598853 | Msa1198250:CDS |
| GTTGAAACAAGGAATTTCTG+AGG | 0.617749 | 8_1:+49599648 | Msa1198250:CDS |
| GGAAGATGAGAAAAGAGGGT+TGG | 0.618029 | 8_1:+49598664 | Msa1198250:CDS |
| AGCTAAACAGTAGTTGCTAG+AGG | 0.620699 | 8_1:+49600634 | Msa1198250:CDS |
| GAACGAACTTGATAGGTACA+AGG | 0.621080 | 8_1:+49599924 | Msa1198250:CDS |
| TCATCCAAAGAGCTAAGTGA+AGG | 0.623110 | 8_1:+49598827 | Msa1198250:CDS |
| AAATGCTGGAAGAATCAACT+AGG | 0.629687 | 8_1:+49599947 | Msa1198250:CDS |
| TAATGCAGACACTCAACTGA+GGG | 0.630553 | 8_1:+49600443 | Msa1198250:CDS |
| AGAAAGCAGTGTGTTTGATG+AGG | 0.636864 | 8_1:+49599815 | Msa1198250:CDS |
| AAAGAGCTAAGTGAAGGAGA+TGG | 0.645825 | 8_1:+49598833 | Msa1198250:CDS |
| CTTAGAGGAAGCAAATGACA+AGG | 0.650055 | 8_1:+49598694 | Msa1198250:CDS |
| CTAATGCAGACACTCAACTG+AGG | 0.666435 | 8_1:+49600442 | Msa1198250:CDS |
| AGAGTGTGCCTTGACTCTCA+AGG | 0.667124 | 8_1:+49599444 | Msa1198250:CDS |
| AGCAATGGAAGAGCTTCAGA+TGG | 0.674494 | 8_1:+49599552 | Msa1198250:CDS |
| ACTTAACAAAGAGAAAGAAG+GGG | 0.682960 | 8_1:+49599711 | Msa1198250:CDS |
| AAGCAAAGTCCAAATCTGAG+AGG | 0.711520 | 8_1:+49598480 | Msa1198250:CDS |
| GGACATGTTGAGAAGCATGG+AGG | 0.719760 | 8_1:+49600464 | Msa1198250:CDS |
| ATGCTGCTAGTGTTGAAACA+AGG | 0.727210 | 8_1:+49599637 | Msa1198250:CDS |
| AAAGACGGATGAAATTACTG+AGG | 0.748447 | 8_1:+49598523 | Msa1198250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGATGAAAAGATTAAAAAA+TGG | + | chr8_1:49598642-49598661 | Msa1198250:CDS | 15.0% |
| !! | TGATGAAAAGATTAAAAAAT+GGG | + | chr8_1:49598643-49598662 | Msa1198250:CDS | 15.0% |
| !! | TTGATGAAAAGATTAAAAAA+TGG | + | chr8_1:49598642-49598661 | Msa1198250:CDS | 15.0% |
| !! | TGATGAAAAGATTAAAAAAT+GGG | + | chr8_1:49598643-49598662 | Msa1198250:CDS | 15.0% |
| !!! | TTGTTCTAAATTTTTAAGCT+TGG | - | chr8_1:49599416-49599435 | None:intergenic | 20.0% |
| !!! | TTGTTCTAAATTTTTAAGCT+TGG | - | chr8_1:49599416-49599435 | None:intergenic | 20.0% |
| !! | AAGTTGAAGTTTCAGATTTT+AGG | + | chr8_1:49599137-49599156 | Msa1198250:CDS | 25.0% |
| ! | ATATTCACTGAAAACAAAAG+AGG | + | chr8_1:49599255-49599274 | Msa1198250:CDS | 25.0% |
| ! | TACTTAACAAAGAGAAAGAA+GGG | + | chr8_1:49599710-49599729 | Msa1198250:CDS | 25.0% |
| ! | TGGAATTTGAATTGCAAATA+TGG | + | chr8_1:49600100-49600119 | Msa1198250:CDS | 25.0% |
| !! | AAGTTGAAGTTTCAGATTTT+AGG | + | chr8_1:49599137-49599156 | Msa1198250:CDS | 25.0% |
| ! | ATATTCACTGAAAACAAAAG+AGG | + | chr8_1:49599255-49599274 | Msa1198250:CDS | 25.0% |
| ! | TACTTAACAAAGAGAAAGAA+GGG | + | chr8_1:49599710-49599729 | Msa1198250:CDS | 25.0% |
| ! | TGGAATTTGAATTGCAAATA+TGG | + | chr8_1:49600100-49600119 | Msa1198250:CDS | 25.0% |
| AGATCAATTAAAGTGGAAGA+AGG | + | chr8_1:49598895-49598914 | Msa1198250:CDS | 30.0% | |
| GAAGCATATGAGAAACTTAA+AGG | + | chr8_1:49598938-49598957 | Msa1198250:CDS | 30.0% | |
| AGCAAGAAAATCAAGAGTTA+AGG | + | chr8_1:49599317-49599336 | Msa1198250:CDS | 30.0% | |
| ATCCATCTCATCTTTGTAAT+TGG | - | chr8_1:49599689-49599708 | None:intergenic | 30.0% | |
| CTACTTAACAAAGAGAAAGA+AGG | + | chr8_1:49599709-49599728 | Msa1198250:CDS | 30.0% | |
| ACTTAACAAAGAGAAAGAAG+GGG | + | chr8_1:49599711-49599730 | Msa1198250:CDS | 30.0% | |
| AATTTGCGAAAGAAGTGAAA+TGG | + | chr8_1:49600080-49600099 | Msa1198250:CDS | 30.0% | |
| ! | CAACAAATTTTCCCTTTCTA+AGG | - | chr8_1:49600382-49600401 | None:intergenic | 30.0% |
| CTTAGAAAGGGAAAATTTGT+TGG | + | chr8_1:49600380-49600399 | Msa1198250:CDS | 30.0% | |
| !!! | AATTTGTTGGCTTTTGTTCA+AGG | + | chr8_1:49600393-49600412 | Msa1198250:CDS | 30.0% |
| !!! | ATTTGTTGGCTTTTGTTCAA+GGG | + | chr8_1:49600394-49600413 | Msa1198250:CDS | 30.0% |
| TGCTGGAATGAATTTGAAAA+AGG | + | chr8_1:49600506-49600525 | Msa1198250:CDS | 30.0% | |
| ACTTTCTTTATCCTACTAGT+AGG | - | chr8_1:49600579-49600598 | None:intergenic | 30.0% | |
| AGATCAATTAAAGTGGAAGA+AGG | + | chr8_1:49598895-49598914 | Msa1198250:CDS | 30.0% | |
| GAAGCATATGAGAAACTTAA+AGG | + | chr8_1:49598938-49598957 | Msa1198250:CDS | 30.0% | |
| AGCAAGAAAATCAAGAGTTA+AGG | + | chr8_1:49599317-49599336 | Msa1198250:CDS | 30.0% | |
| ATCCATCTCATCTTTGTAAT+TGG | - | chr8_1:49599689-49599708 | None:intergenic | 30.0% | |
| CTACTTAACAAAGAGAAAGA+AGG | + | chr8_1:49599709-49599728 | Msa1198250:CDS | 30.0% | |
| ACTTAACAAAGAGAAAGAAG+GGG | + | chr8_1:49599711-49599730 | Msa1198250:CDS | 30.0% | |
| AATTTGCGAAAGAAGTGAAA+TGG | + | chr8_1:49600080-49600099 | Msa1198250:CDS | 30.0% | |
| ! | CAACAAATTTTCCCTTTCTA+AGG | - | chr8_1:49600382-49600401 | None:intergenic | 30.0% |
| CTTAGAAAGGGAAAATTTGT+TGG | + | chr8_1:49600380-49600399 | Msa1198250:CDS | 30.0% | |
| !!! | AATTTGTTGGCTTTTGTTCA+AGG | + | chr8_1:49600393-49600412 | Msa1198250:CDS | 30.0% |
| !!! | ATTTGTTGGCTTTTGTTCAA+GGG | + | chr8_1:49600394-49600413 | Msa1198250:CDS | 30.0% |
| TGCTGGAATGAATTTGAAAA+AGG | + | chr8_1:49600506-49600525 | Msa1198250:CDS | 30.0% | |
| ACTTTCTTTATCCTACTAGT+AGG | - | chr8_1:49600579-49600598 | None:intergenic | 30.0% | |
| GGAAAAGGTTTATGAAGAGT+TGG | + | chr8_1:49598349-49598368 | Msa1198250:CDS | 35.0% | |
| !! | TTGGTTGACTTGTGTATCAA+GGG | - | chr8_1:49598453-49598472 | None:intergenic | 35.0% |
| !! | TTTGGTTGACTTGTGTATCA+AGG | - | chr8_1:49598454-49598473 | None:intergenic | 35.0% |
| AAAGACGGATGAAATTACTG+AGG | + | chr8_1:49598523-49598542 | Msa1198250:CDS | 35.0% | |
| !! | AGCTTTGAGATGTTTGATGA+TGG | - | chr8_1:49598597-49598616 | None:intergenic | 35.0% |
| AAATGGGAAGATGAGAAAAG+AGG | + | chr8_1:49598659-49598678 | Msa1198250:CDS | 35.0% | |
| AATGGGAAGATGAGAAAAGA+GGG | + | chr8_1:49598660-49598679 | Msa1198250:CDS | 35.0% | |
| AAGCCTGAAAAGTTGTCTAT+CGG | + | chr8_1:49598763-49598782 | Msa1198250:CDS | 35.0% | |
| AGTTGGGAGATCAATTAAAG+TGG | + | chr8_1:49598888-49598907 | Msa1198250:CDS | 35.0% | |
| TTAAGTCTAGCAAGAAAGAG+TGG | + | chr8_1:49598966-49598985 | Msa1198250:CDS | 35.0% | |
| TAAGTCTAGCAAGAAAGAGT+GGG | + | chr8_1:49598967-49598986 | Msa1198250:CDS | 35.0% | |
| ATTCAACAACCTTGTCTCAA+CGG | - | chr8_1:49599602-49599621 | None:intergenic | 35.0% | |
| GTTGAAACAAGGAATTTCTG+AGG | + | chr8_1:49599648-49599667 | Msa1198250:CDS | 35.0% | |
| TGCCAATTACAAAGATGAGA+TGG | + | chr8_1:49599684-49599703 | Msa1198250:CDS | 35.0% | |
| ! | TTTTCAACTGATGAAGCAGT+TGG | + | chr8_1:49599738-49599757 | Msa1198250:CDS | 35.0% |
| CAATTCTTTGTTGCATCCAT+AGG | - | chr8_1:49599851-49599870 | None:intergenic | 35.0% | |
| CAGTTCTTTGTTGCATTCAT+TGG | - | chr8_1:49599902-49599921 | None:intergenic | 35.0% | |
| AAATGCTGGAAGAATCAACT+AGG | + | chr8_1:49599947-49599966 | Msa1198250:CDS | 35.0% | |
| AGACATTGCTATCAATGAAC+TGG | + | chr8_1:49600050-49600069 | Msa1198250:CDS | 35.0% | |
| ! | CTAGTTCTTTACGCATCAAA+TGG | - | chr8_1:49600167-49600186 | None:intergenic | 35.0% |
| CATCAAGCAAGAGAAAGATA+AGG | + | chr8_1:49600224-49600243 | Msa1198250:CDS | 35.0% | |
| GACAAAACTGTCCTTAGAAA+GGG | + | chr8_1:49600368-49600387 | Msa1198250:CDS | 35.0% | |
| !!! | GAGGAATCTTTTGAGATTGA+TGG | + | chr8_1:49600483-49600502 | Msa1198250:CDS | 35.0% |
| CTTGCATATTCTCTTTCACA+TGG | - | chr8_1:49600545-49600564 | None:intergenic | 35.0% | |
| ! | TTCAAGTTTCTCCTACTAGT+AGG | + | chr8_1:49600565-49600584 | Msa1198250:CDS | 35.0% |
| TGGAGATCTTGTATCAGAAA+TGG | - | chr8_1:49600607-49600626 | None:intergenic | 35.0% | |
| TGATACAAGATCTCCATTCA+AGG | + | chr8_1:49600611-49600630 | Msa1198250:CDS | 35.0% | |
| GGAAAAGGTTTATGAAGAGT+TGG | + | chr8_1:49598349-49598368 | Msa1198250:CDS | 35.0% | |
| !! | TTGGTTGACTTGTGTATCAA+GGG | - | chr8_1:49598453-49598472 | None:intergenic | 35.0% |
| !! | TTTGGTTGACTTGTGTATCA+AGG | - | chr8_1:49598454-49598473 | None:intergenic | 35.0% |
| AAAGACGGATGAAATTACTG+AGG | + | chr8_1:49598523-49598542 | Msa1198250:CDS | 35.0% | |
| !! | AGCTTTGAGATGTTTGATGA+TGG | - | chr8_1:49598597-49598616 | None:intergenic | 35.0% |
| AAATGGGAAGATGAGAAAAG+AGG | + | chr8_1:49598659-49598678 | Msa1198250:CDS | 35.0% | |
| AATGGGAAGATGAGAAAAGA+GGG | + | chr8_1:49598660-49598679 | Msa1198250:CDS | 35.0% | |
| AAGCCTGAAAAGTTGTCTAT+CGG | + | chr8_1:49598763-49598782 | Msa1198250:CDS | 35.0% | |
| AGTTGGGAGATCAATTAAAG+TGG | + | chr8_1:49598888-49598907 | Msa1198250:CDS | 35.0% | |
| TTAAGTCTAGCAAGAAAGAG+TGG | + | chr8_1:49598966-49598985 | Msa1198250:CDS | 35.0% | |
| TAAGTCTAGCAAGAAAGAGT+GGG | + | chr8_1:49598967-49598986 | Msa1198250:CDS | 35.0% | |
| ATTCAACAACCTTGTCTCAA+CGG | - | chr8_1:49599602-49599621 | None:intergenic | 35.0% | |
| GTTGAAACAAGGAATTTCTG+AGG | + | chr8_1:49599648-49599667 | Msa1198250:CDS | 35.0% | |
| TGCCAATTACAAAGATGAGA+TGG | + | chr8_1:49599684-49599703 | Msa1198250:CDS | 35.0% | |
| ! | TTTTCAACTGATGAAGCAGT+TGG | + | chr8_1:49599738-49599757 | Msa1198250:CDS | 35.0% |
| CAATTCTTTGTTGCATCCAT+AGG | - | chr8_1:49599851-49599870 | None:intergenic | 35.0% | |
| CAGTTCTTTGTTGCATTCAT+TGG | - | chr8_1:49599902-49599921 | None:intergenic | 35.0% | |
| AAATGCTGGAAGAATCAACT+AGG | + | chr8_1:49599947-49599966 | Msa1198250:CDS | 35.0% | |
| AGACATTGCTATCAATGAAC+TGG | + | chr8_1:49600050-49600069 | Msa1198250:CDS | 35.0% | |
| ! | CTAGTTCTTTACGCATCAAA+TGG | - | chr8_1:49600167-49600186 | None:intergenic | 35.0% |
| CATCAAGCAAGAGAAAGATA+AGG | + | chr8_1:49600224-49600243 | Msa1198250:CDS | 35.0% | |
| GACAAAACTGTCCTTAGAAA+GGG | + | chr8_1:49600368-49600387 | Msa1198250:CDS | 35.0% | |
| !!! | GAGGAATCTTTTGAGATTGA+TGG | + | chr8_1:49600483-49600502 | Msa1198250:CDS | 35.0% |
| CTTGCATATTCTCTTTCACA+TGG | - | chr8_1:49600545-49600564 | None:intergenic | 35.0% | |
| ! | TTCAAGTTTCTCCTACTAGT+AGG | + | chr8_1:49600565-49600584 | Msa1198250:CDS | 35.0% |
| TGGAGATCTTGTATCAGAAA+TGG | - | chr8_1:49600607-49600626 | None:intergenic | 35.0% | |
| TGATACAAGATCTCCATTCA+AGG | + | chr8_1:49600611-49600630 | Msa1198250:CDS | 35.0% | |
| TGAAGAGTTGGATGAAGCAA+AGG | + | chr8_1:49598361-49598380 | Msa1198250:CDS | 40.0% | |
| TGGACTTTGCTTCTTGTGTT+TGG | - | chr8_1:49598472-49598491 | None:intergenic | 40.0% | |
| AAGCAAAGTCCAAATCTGAG+AGG | + | chr8_1:49598480-49598499 | Msa1198250:CDS | 40.0% | |
| TCAGGAACTGCTTCAAAAGA+CGG | + | chr8_1:49598508-49598527 | Msa1198250:CDS | 40.0% | |
| ! | CTTGTCATTTGCTTCCTCTA+AGG | - | chr8_1:49598696-49598715 | None:intergenic | 40.0% |
| CTTAGAGGAAGCAAATGACA+AGG | + | chr8_1:49598694-49598713 | Msa1198250:CDS | 40.0% | |
| ! | CAACCGATAGACAACTTTTC+AGG | - | chr8_1:49598769-49598788 | None:intergenic | 40.0% |
| TCATCCAAAGAGCTAAGTGA+AGG | + | chr8_1:49598827-49598846 | Msa1198250:CDS | 40.0% | |
| ! | ATCTCCTTCACTTAGCTCTT+TGG | - | chr8_1:49598834-49598853 | None:intergenic | 40.0% |
| AAAGAGCTAAGTGAAGGAGA+TGG | + | chr8_1:49598833-49598852 | Msa1198250:CDS | 40.0% | |
| AGATGGCATGTTTCAGAAGT+TGG | + | chr8_1:49598850-49598869 | Msa1198250:CDS | 40.0% | |
| GAGGAGGAAAAAGTGAAGTT+GGG | + | chr8_1:49598872-49598891 | Msa1198250:CDS | 40.0% | |
| TTTCTACATGAGCAAGAGCT+TGG | - | chr8_1:49599099-49599118 | None:intergenic | 40.0% | |
| GAAGCTCAAATTCAAGAAGC+AGG | + | chr8_1:49599361-49599380 | Msa1198250:CDS | 40.0% | |
| TCTCGGATAGAACAATTGAC+TGG | + | chr8_1:49599487-49599506 | Msa1198250:CDS | 40.0% | |
| GGAAGCTAAAATTGCAGCAA+TGG | + | chr8_1:49599537-49599556 | Msa1198250:CDS | 40.0% | |
| TGAGACAAGGTTGTTGAATG+AGG | + | chr8_1:49599603-49599622 | Msa1198250:CDS | 40.0% | |
| ! | ATGCTGCTAGTGTTGAAACA+AGG | + | chr8_1:49599637-49599656 | Msa1198250:CDS | 40.0% |
| !! | GAATTTCTGAGGCTCAGTTA+AGG | + | chr8_1:49599659-49599678 | Msa1198250:CDS | 40.0% |
| AGAAAGCAGTGTGTTTGATG+AGG | + | chr8_1:49599815-49599834 | Msa1198250:CDS | 40.0% | |
| AACTGCAGAACGAACTTGAT+AGG | + | chr8_1:49599917-49599936 | Msa1198250:CDS | 40.0% | |
| GAACGAACTTGATAGGTACA+AGG | + | chr8_1:49599924-49599943 | Msa1198250:CDS | 40.0% | |
| TGATAGGTACAAGGAAATGC+TGG | + | chr8_1:49599933-49599952 | Msa1198250:CDS | 40.0% | |
| CTTCTTGCACAAGTAGATGT+TGG | + | chr8_1:49600195-49600214 | Msa1198250:CDS | 40.0% | |
| !! | TCAGAAAGAGGCTGTTTTGT+TGG | + | chr8_1:49600260-49600279 | Msa1198250:CDS | 40.0% |
| !! | GAGAGTGTTGTGATTGCAAA+AGG | + | chr8_1:49600309-49600328 | Msa1198250:CDS | 40.0% |
| !! | TGTGATTGCAAAAGGCACTA+TGG | + | chr8_1:49600317-49600336 | Msa1198250:CDS | 40.0% |
| CGACAAAACTGTCCTTAGAA+AGG | + | chr8_1:49600367-49600386 | Msa1198250:CDS | 40.0% | |
| TAATGCAGACACTCAACTGA+GGG | + | chr8_1:49600443-49600462 | Msa1198250:CDS | 40.0% | |
| !!! | TCTTTTGAGATTGATGGTGC+TGG | + | chr8_1:49600489-49600508 | Msa1198250:CDS | 40.0% |
| ! | CTACTGTTTAGCTCCTTGAA+TGG | - | chr8_1:49600627-49600646 | None:intergenic | 40.0% |
| TGAAGAGTTGGATGAAGCAA+AGG | + | chr8_1:49598361-49598380 | Msa1198250:CDS | 40.0% | |
| TGGACTTTGCTTCTTGTGTT+TGG | - | chr8_1:49598472-49598491 | None:intergenic | 40.0% | |
| AAGCAAAGTCCAAATCTGAG+AGG | + | chr8_1:49598480-49598499 | Msa1198250:CDS | 40.0% | |
| TCAGGAACTGCTTCAAAAGA+CGG | + | chr8_1:49598508-49598527 | Msa1198250:CDS | 40.0% | |
| ! | CTTGTCATTTGCTTCCTCTA+AGG | - | chr8_1:49598696-49598715 | None:intergenic | 40.0% |
| CTTAGAGGAAGCAAATGACA+AGG | + | chr8_1:49598694-49598713 | Msa1198250:CDS | 40.0% | |
| ! | CAACCGATAGACAACTTTTC+AGG | - | chr8_1:49598769-49598788 | None:intergenic | 40.0% |
| TCATCCAAAGAGCTAAGTGA+AGG | + | chr8_1:49598827-49598846 | Msa1198250:CDS | 40.0% | |
| ! | ATCTCCTTCACTTAGCTCTT+TGG | - | chr8_1:49598834-49598853 | None:intergenic | 40.0% |
| AAAGAGCTAAGTGAAGGAGA+TGG | + | chr8_1:49598833-49598852 | Msa1198250:CDS | 40.0% | |
| AGATGGCATGTTTCAGAAGT+TGG | + | chr8_1:49598850-49598869 | Msa1198250:CDS | 40.0% | |
| GAGGAGGAAAAAGTGAAGTT+GGG | + | chr8_1:49598872-49598891 | Msa1198250:CDS | 40.0% | |
| TTTCTACATGAGCAAGAGCT+TGG | - | chr8_1:49599099-49599118 | None:intergenic | 40.0% | |
| GAAGCTCAAATTCAAGAAGC+AGG | + | chr8_1:49599361-49599380 | Msa1198250:CDS | 40.0% | |
| TCTCGGATAGAACAATTGAC+TGG | + | chr8_1:49599487-49599506 | Msa1198250:CDS | 40.0% | |
| GGAAGCTAAAATTGCAGCAA+TGG | + | chr8_1:49599537-49599556 | Msa1198250:CDS | 40.0% | |
| TGAGACAAGGTTGTTGAATG+AGG | + | chr8_1:49599603-49599622 | Msa1198250:CDS | 40.0% | |
| ! | ATGCTGCTAGTGTTGAAACA+AGG | + | chr8_1:49599637-49599656 | Msa1198250:CDS | 40.0% |
| !! | GAATTTCTGAGGCTCAGTTA+AGG | + | chr8_1:49599659-49599678 | Msa1198250:CDS | 40.0% |
| AGAAAGCAGTGTGTTTGATG+AGG | + | chr8_1:49599815-49599834 | Msa1198250:CDS | 40.0% | |
| AACTGCAGAACGAACTTGAT+AGG | + | chr8_1:49599917-49599936 | Msa1198250:CDS | 40.0% | |
| GAACGAACTTGATAGGTACA+AGG | + | chr8_1:49599924-49599943 | Msa1198250:CDS | 40.0% | |
| TGATAGGTACAAGGAAATGC+TGG | + | chr8_1:49599933-49599952 | Msa1198250:CDS | 40.0% | |
| CTTCTTGCACAAGTAGATGT+TGG | + | chr8_1:49600195-49600214 | Msa1198250:CDS | 40.0% | |
| !! | TCAGAAAGAGGCTGTTTTGT+TGG | + | chr8_1:49600260-49600279 | Msa1198250:CDS | 40.0% |
| !! | GAGAGTGTTGTGATTGCAAA+AGG | + | chr8_1:49600309-49600328 | Msa1198250:CDS | 40.0% |
| !! | TGTGATTGCAAAAGGCACTA+TGG | + | chr8_1:49600317-49600336 | Msa1198250:CDS | 40.0% |
| CGACAAAACTGTCCTTAGAA+AGG | + | chr8_1:49600367-49600386 | Msa1198250:CDS | 40.0% | |
| TAATGCAGACACTCAACTGA+GGG | + | chr8_1:49600443-49600462 | Msa1198250:CDS | 40.0% | |
| !!! | TCTTTTGAGATTGATGGTGC+TGG | + | chr8_1:49600489-49600508 | Msa1198250:CDS | 40.0% |
| ! | CTACTGTTTAGCTCCTTGAA+TGG | - | chr8_1:49600627-49600646 | None:intergenic | 40.0% |
| GGCTGAGATTGAGAAACTCA+AGG | + | chr8_1:49598382-49598401 | Msa1198250:CDS | 45.0% | |
| CTGATCAAGCCTCTCAGATT+TGG | - | chr8_1:49598492-49598511 | None:intergenic | 45.0% | |
| CAAATCTGAGAGGCTTGATC+AGG | + | chr8_1:49598490-49598509 | Msa1198250:CDS | 45.0% | |
| GGAAGATGAGAAAAGAGGGT+TGG | + | chr8_1:49598664-49598683 | Msa1198250:CDS | 45.0% | |
| !! | TGAGAAAAGAGGGTTGGTGT+TGG | + | chr8_1:49598670-49598689 | Msa1198250:CDS | 45.0% |
| TGGCATGTTTCAGAAGTTGG+AGG | + | chr8_1:49598853-49598872 | Msa1198250:CDS | 45.0% | |
| CATGTTTCAGAAGTTGGAGG+AGG | + | chr8_1:49598856-49598875 | Msa1198250:CDS | 45.0% | |
| GGAGGAGGAAAAAGTGAAGT+TGG | + | chr8_1:49598871-49598890 | Msa1198250:CDS | 45.0% | |
| TAGCAAGAAAGAGTGGGAGA+TGG | + | chr8_1:49598973-49598992 | Msa1198250:CDS | 45.0% | |
| !!! | CAACTTCGAGTCGCTTTTTC+TGG | - | chr8_1:49599123-49599142 | None:intergenic | 45.0% |
| AGCATCATGGTACTCACTAC+CGG | - | chr8_1:49599179-49599198 | None:intergenic | 45.0% | |
| ! | CTTGCTCTAGCTTCTCAGTT+TGG | - | chr8_1:49599303-49599322 | None:intergenic | 45.0% |
| GATGTCACTCAGAGAACTAC+AGG | + | chr8_1:49599339-49599358 | Msa1198250:CDS | 45.0% | |
| ACTATTCGCAGTCGAAGTTG+AGG | + | chr8_1:49599389-49599408 | Msa1198250:CDS | 45.0% | |
| TTCTATCCGAGAGTCCCATT+CGG | - | chr8_1:49599479-49599498 | None:intergenic | 45.0% | |
| GAATATGTGTCAGTCTGAGC+TGG | + | chr8_1:49599516-49599535 | Msa1198250:CDS | 45.0% | |
| AGCAATGGAAGAGCTTCAGA+TGG | + | chr8_1:49599552-49599571 | Msa1198250:CDS | 45.0% | |
| ! | GTTTGATAGCCGTTGAGACA+AGG | + | chr8_1:49599590-49599609 | Msa1198250:CDS | 45.0% |
| ATGAGGAAGATCGAGTCCTA+TGG | + | chr8_1:49599832-49599851 | Msa1198250:CDS | 45.0% | |
| TCTGCAAAACCTTCTCTTCG+AGG | - | chr8_1:49599984-49600003 | None:intergenic | 45.0% | |
| AGAGAAAGATAAGGCTGTCG+AGG | + | chr8_1:49600233-49600252 | Msa1198250:CDS | 45.0% | |
| ! | CGCATTTTCATTCAGCTCAC+AGG | - | chr8_1:49600349-49600368 | None:intergenic | 45.0% |
| CTAATGCAGACACTCAACTG+AGG | + | chr8_1:49600442-49600461 | Msa1198250:CDS | 45.0% | |
| GGCTGAGATTGAGAAACTCA+AGG | + | chr8_1:49598382-49598401 | Msa1198250:CDS | 45.0% | |
| CTGATCAAGCCTCTCAGATT+TGG | - | chr8_1:49598492-49598511 | None:intergenic | 45.0% | |
| CAAATCTGAGAGGCTTGATC+AGG | + | chr8_1:49598490-49598509 | Msa1198250:CDS | 45.0% | |
| GGAAGATGAGAAAAGAGGGT+TGG | + | chr8_1:49598664-49598683 | Msa1198250:CDS | 45.0% | |
| !! | TGAGAAAAGAGGGTTGGTGT+TGG | + | chr8_1:49598670-49598689 | Msa1198250:CDS | 45.0% |
| TGGCATGTTTCAGAAGTTGG+AGG | + | chr8_1:49598853-49598872 | Msa1198250:CDS | 45.0% | |
| CATGTTTCAGAAGTTGGAGG+AGG | + | chr8_1:49598856-49598875 | Msa1198250:CDS | 45.0% | |
| GGAGGAGGAAAAAGTGAAGT+TGG | + | chr8_1:49598871-49598890 | Msa1198250:CDS | 45.0% | |
| TAGCAAGAAAGAGTGGGAGA+TGG | + | chr8_1:49598973-49598992 | Msa1198250:CDS | 45.0% | |
| !!! | CAACTTCGAGTCGCTTTTTC+TGG | - | chr8_1:49599123-49599142 | None:intergenic | 45.0% |
| AGCATCATGGTACTCACTAC+CGG | - | chr8_1:49599179-49599198 | None:intergenic | 45.0% | |
| ! | CTTGCTCTAGCTTCTCAGTT+TGG | - | chr8_1:49599303-49599322 | None:intergenic | 45.0% |
| GATGTCACTCAGAGAACTAC+AGG | + | chr8_1:49599339-49599358 | Msa1198250:CDS | 45.0% | |
| ACTATTCGCAGTCGAAGTTG+AGG | + | chr8_1:49599389-49599408 | Msa1198250:CDS | 45.0% | |
| TTCTATCCGAGAGTCCCATT+CGG | - | chr8_1:49599479-49599498 | None:intergenic | 45.0% | |
| GAATATGTGTCAGTCTGAGC+TGG | + | chr8_1:49599516-49599535 | Msa1198250:CDS | 45.0% | |
| AGCAATGGAAGAGCTTCAGA+TGG | + | chr8_1:49599552-49599571 | Msa1198250:CDS | 45.0% | |
| ! | GTTTGATAGCCGTTGAGACA+AGG | + | chr8_1:49599590-49599609 | Msa1198250:CDS | 45.0% |
| ATGAGGAAGATCGAGTCCTA+TGG | + | chr8_1:49599832-49599851 | Msa1198250:CDS | 45.0% | |
| TCTGCAAAACCTTCTCTTCG+AGG | - | chr8_1:49599984-49600003 | None:intergenic | 45.0% | |
| AGAGAAAGATAAGGCTGTCG+AGG | + | chr8_1:49600233-49600252 | Msa1198250:CDS | 45.0% | |
| ! | CGCATTTTCATTCAGCTCAC+AGG | - | chr8_1:49600349-49600368 | None:intergenic | 45.0% |
| CTAATGCAGACACTCAACTG+AGG | + | chr8_1:49600442-49600461 | Msa1198250:CDS | 45.0% | |
| !! | GGTTGCGAAGCAGAAGTGTT+CGG | + | chr8_1:49598784-49598803 | Msa1198250:CDS | 50.0% |
| CTACATGAGCAAGAGCTTGG+TGG | - | chr8_1:49599096-49599115 | None:intergenic | 50.0% | |
| !! | AGGCTGCAGCTTGATAATGC+CGG | + | chr8_1:49599157-49599176 | Msa1198250:CDS | 50.0% |
| CGAGCTGTAGTCTAGCATCA+TGG | - | chr8_1:49599192-49599211 | None:intergenic | 50.0% | |
| AGAGTGTGCCTTGACTCTCA+AGG | + | chr8_1:49599444-49599463 | Msa1198250:CDS | 50.0% | |
| !! | CTCTCTAGCCTTGAGAGTCA+AGG | - | chr8_1:49599455-49599474 | None:intergenic | 50.0% |
| CTTGACTCTCAAGGCTAGAG+AGG | + | chr8_1:49599453-49599472 | Msa1198250:CDS | 50.0% | |
| GGAAGAGCTTCAGATGGAGT+TGG | + | chr8_1:49599558-49599577 | Msa1198250:CDS | 50.0% | |
| TCAGCAGATCCTCGAAGAGA+AGG | + | chr8_1:49599972-49599991 | Msa1198250:CDS | 50.0% | |
| TGTCGAGGAGCTTCAGAAAG+AGG | + | chr8_1:49600248-49600267 | Msa1198250:CDS | 50.0% | |
| GAGGGACATGTTGAGAAGCA+TGG | + | chr8_1:49600461-49600480 | Msa1198250:CDS | 50.0% | |
| ! | GGACATGTTGAGAAGCATGG+AGG | + | chr8_1:49600464-49600483 | Msa1198250:CDS | 50.0% |
| !! | GGTTGCGAAGCAGAAGTGTT+CGG | + | chr8_1:49598784-49598803 | Msa1198250:CDS | 50.0% |
| CTACATGAGCAAGAGCTTGG+TGG | - | chr8_1:49599096-49599115 | None:intergenic | 50.0% | |
| !! | AGGCTGCAGCTTGATAATGC+CGG | + | chr8_1:49599157-49599176 | Msa1198250:CDS | 50.0% |
| CGAGCTGTAGTCTAGCATCA+TGG | - | chr8_1:49599192-49599211 | None:intergenic | 50.0% | |
| AGAGTGTGCCTTGACTCTCA+AGG | + | chr8_1:49599444-49599463 | Msa1198250:CDS | 50.0% | |
| !! | CTCTCTAGCCTTGAGAGTCA+AGG | - | chr8_1:49599455-49599474 | None:intergenic | 50.0% |
| CTTGACTCTCAAGGCTAGAG+AGG | + | chr8_1:49599453-49599472 | Msa1198250:CDS | 50.0% | |
| GGAAGAGCTTCAGATGGAGT+TGG | + | chr8_1:49599558-49599577 | Msa1198250:CDS | 50.0% | |
| TCAGCAGATCCTCGAAGAGA+AGG | + | chr8_1:49599972-49599991 | Msa1198250:CDS | 50.0% | |
| TGTCGAGGAGCTTCAGAAAG+AGG | + | chr8_1:49600248-49600267 | Msa1198250:CDS | 50.0% | |
| GAGGGACATGTTGAGAAGCA+TGG | + | chr8_1:49600461-49600480 | Msa1198250:CDS | 50.0% | |
| ! | GGACATGTTGAGAAGCATGG+AGG | + | chr8_1:49600464-49600483 | Msa1198250:CDS | 50.0% |
| !! | AGGGTTGGTGTTGGCCTTAG+AGG | + | chr8_1:49598679-49598698 | Msa1198250:CDS | 55.0% |
| ! | ATGAGCAAGAGCTTGGTGGC+AGG | - | chr8_1:49599092-49599111 | None:intergenic | 55.0% |
| TCAAGGCTAGAGAGGCCGAA+TGG | + | chr8_1:49599461-49599480 | Msa1198250:CDS | 55.0% | |
| CAAGGCTAGAGAGGCCGAAT+GGG | + | chr8_1:49599462-49599481 | Msa1198250:CDS | 55.0% | |
| !! | AGGGTTGGTGTTGGCCTTAG+AGG | + | chr8_1:49598679-49598698 | Msa1198250:CDS | 55.0% |
| ! | ATGAGCAAGAGCTTGGTGGC+AGG | - | chr8_1:49599092-49599111 | None:intergenic | 55.0% |
| TCAAGGCTAGAGAGGCCGAA+TGG | + | chr8_1:49599461-49599480 | Msa1198250:CDS | 55.0% | |
| CAAGGCTAGAGAGGCCGAAT+GGG | + | chr8_1:49599462-49599481 | Msa1198250:CDS | 55.0% | |
| GAGAGGCCGAATGGGACTCT+CGG | + | chr8_1:49599470-49599489 | Msa1198250:CDS | 60.0% | |
| GAGAGGCCGAATGGGACTCT+CGG | + | chr8_1:49599470-49599489 | Msa1198250:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 49598347 | 49600653 | 49598347 | ID=Msa1198250;Name=Msa1198250 |
| chr8_1 | mRNA | 49598347 | 49600653 | 49598347 | ID=Msa1198250-mRNA-1;Parent=Msa1198250;Name=Msa1198250-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|1|1|0|768 |
| chr8_1 | exon | 49598347 | 49600653 | 49598347 | ID=Msa1198250-mRNA-1:exon:15559;Parent=Msa1198250-mRNA-1 |
| chr8_1 | CDS | 49598347 | 49600653 | 49598347 | ID=Msa1198250-mRNA-1:cds;Parent=Msa1198250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
