AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0097770


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0097770 MtrunA17_Chr1g0152161 97.783 451 5 2 1 451 1 446 0.0 925
Msa0097770 MtrunA17_Chr3g0135161 64.119 471 122 17 1 451 1 444 0.0 532
Msa0097770 MtrunA17_Chr4g0054351 52.532 474 175 12 1 451 1 447 1.03e-132 397
Msa0097770 MtrunA17_Chr8g0343851 44.009 459 153 15 18 451 3 382 1.26e-102 317
Msa0097770 MtrunA17_Chr5g0400871 76.163 172 34 2 283 451 219 386 1.61e-87 277
Msa0097770 MtrunA17_Chr4g0072291 64.078 206 59 3 261 451 91 296 2.38e-86 273
Msa0097770 MtrunA17_Chr2g0328971 65.641 195 42 3 258 450 129 300 4.24e-82 262
Msa0097770 MtrunA17_Chr4g0032631 65.990 197 46 3 258 451 122 300 4.52e-82 263
Msa0097770 MtrunA17_Chr5g0412151 59.459 222 82 4 237 450 139 360 5.42e-82 262
Msa0097770 MtrunA17_Chr7g0249621 82.313 147 23 1 308 451 250 396 2.41e-80 262
Msa0097770 MtrunA17_Chr4g0073521 62.987 154 55 1 300 451 28 181 5.80e-62 205
Msa0097770 MtrunA17_Chr7g0216601 62.179 156 55 2 299 451 48 202 6.81e-60 201
Msa0097770 MtrunA17_Chr8g0355191 56.571 175 67 3 284 450 15 188 9.13e-58 196
Msa0097770 MtrunA17_Chr6g0452911 51.832 191 73 2 280 451 15 205 2.16e-54 186
Msa0097770 MtrunA17_Chr8g0355181 64.444 135 48 0 316 450 55 189 7.10e-53 182
Msa0097770 MtrunA17_Chr8g0362541 53.804 184 71 2 285 454 23 206 7.95e-53 182
Msa0097770 MtrunA17_Chr4g0002011 66.187 139 44 1 316 451 35 173 2.52e-52 179
Msa0097770 MtrunA17_Chr8g0367311 72.549 102 28 0 354 455 22 123 1.18e-48 167
Msa0097770 MtrunA17_Chr2g0305821 57.931 145 51 2 284 427 22 157 3.67e-43 149
Msa0097770 MtrunA17_Chr7g0257361 63.077 130 40 2 315 441 55 179 7.57e-40 148
Msa0097770 MtrunA17_Chr4g0053181 49.265 136 61 3 320 455 176 303 7.66e-29 119
Msa0097770 MtrunA17_Chr7g0263581 45.752 153 75 3 298 450 117 261 1.14e-28 117
Msa0097770 MtrunA17_Chr5g0401891 48.529 136 62 3 320 455 152 279 1.49e-28 117
Msa0097770 MtrunA17_Chr4g0030191 42.604 169 89 3 287 455 98 258 2.36e-28 117
Msa0097770 MtrunA17_Chr2g0325911 40.957 188 83 7 274 443 72 249 1.99e-25 108
Msa0097770 MtrunA17_Chr8g0367321 56.962 79 31 2 280 355 115 193 4.57e-21 90.9
Msa0097770 MtrunA17_Chr3g0126151 43.956 91 50 1 365 455 47 136 8.42e-20 85.5
Msa0097770 MtrunA17_Chr1g0170761 39.716 141 77 3 296 436 113 245 1.74e-17 84.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0097770 AT4G37750.1 49.580 476 137 21 12 450 7 416 7.89e-113 343
Msa0097770 AT1G72570.1 70.769 195 52 3 261 451 164 357 1.03e-90 281
Msa0097770 AT1G51190.1 59.483 232 68 4 223 451 116 324 2.39e-85 273
Msa0097770 AT5G57390.2 78.065 155 31 1 300 451 65 219 2.12e-84 266
Msa0097770 AT5G57390.1 78.065 155 31 1 300 451 183 337 1.64e-83 267
Msa0097770 AT3G20840.1 65.482 197 58 2 258 451 126 315 2.71e-82 265
Msa0097770 AT5G65510.3 46.429 308 124 7 187 454 4 310 8.04e-81 253
Msa0097770 AT5G17430.2 82.192 146 23 1 308 450 136 281 3.42e-80 258
Msa0097770 AT5G17430.1 82.192 146 23 1 308 450 198 343 7.43e-80 259
Msa0097770 AT5G65510.2 46.429 308 124 7 183 450 58 364 1.55e-78 253
Msa0097770 AT5G65510.1 46.429 308 124 7 183 450 58 364 1.55e-78 253
Msa0097770 AT5G65510.4 46.711 304 121 7 187 450 4 306 2.10e-78 251
Msa0097770 AT5G10510.2 71.519 158 45 0 293 450 203 360 4.98e-77 250
Msa0097770 AT5G10510.7 70.186 161 45 1 293 450 203 363 5.58e-75 245
Msa0097770 AT5G10510.5 70.186 161 45 1 293 450 203 363 5.58e-75 245
Msa0097770 AT5G10510.1 70.186 161 45 1 293 450 226 386 6.11e-75 245
Msa0097770 AT5G10510.6 70.186 161 45 1 293 450 241 401 7.24e-75 246
Msa0097770 AT5G10510.4 70.186 161 45 1 293 450 241 401 7.24e-75 246
Msa0097770 AT5G10510.3 61.878 181 46 1 293 450 241 421 9.73e-71 235
Msa0097770 AT3G54320.3 57.396 169 64 2 291 451 31 199 1.73e-56 193
Msa0097770 AT3G54320.1 57.738 168 63 2 291 450 31 198 2.22e-56 193
Msa0097770 AT1G79700.2 64.748 139 46 1 316 451 48 186 2.24e-50 174
Msa0097770 AT1G16060.1 52.910 189 69 4 270 451 17 192 2.03e-48 169
Msa0097770 AT1G79700.1 65.354 127 41 1 316 439 48 174 6.71e-45 159
Msa0097770 AT2G41710.1 61.364 132 43 2 313 441 63 189 2.06e-39 147
Msa0097770 AT2G41710.4 61.364 132 43 2 313 441 63 189 2.81e-39 147
Msa0097770 AT3G54320.4 66.327 98 33 0 354 451 36 133 1.68e-38 143
Msa0097770 AT3G54320.5 66.327 98 33 0 354 451 36 133 1.68e-38 143
Msa0097770 AT2G41710.2 59.124 137 43 3 313 441 63 194 4.62e-37 141
Msa0097770 AT2G41710.3 59.504 121 41 2 324 441 109 224 5.84e-33 130
Msa0097770 AT1G79700.4 63.265 98 36 0 354 451 7 104 1.51e-30 118
Msa0097770 AT1G79700.3 63.265 98 36 0 354 451 13 110 1.93e-30 118
Msa0097770 AT4G36920.1 44.186 172 87 4 284 455 96 258 3.65e-29 119
Msa0097770 AT4G36920.2 44.186 172 87 4 284 455 96 258 3.65e-29 119
Msa0097770 AT2G28550.4 47.059 136 64 3 320 455 153 280 2.74e-28 115
Msa0097770 AT5G67180.2 39.062 192 99 4 264 455 50 223 4.00e-28 113
Msa0097770 AT5G67180.3 39.062 192 99 4 264 455 50 223 4.74e-28 112
Msa0097770 AT5G67180.4 39.062 192 99 4 264 455 50 223 5.95e-28 112
Msa0097770 AT1G16060.3 58.654 104 43 0 348 451 19 122 8.87e-28 112
Msa0097770 AT5G67180.1 39.062 192 99 4 264 455 50 223 2.09e-27 112
Msa0097770 AT2G28550.3 47.059 136 64 3 320 455 153 280 4.25e-27 113
Msa0097770 AT2G28550.2 47.581 124 57 3 320 443 153 268 7.19e-25 103
Msa0097770 AT2G28550.6 47.581 124 57 3 320 443 153 268 7.19e-25 103
Msa0097770 AT2G28550.1 47.581 124 57 3 320 443 153 268 1.41e-23 103
Msa0097770 AT2G39250.2 42.202 109 56 2 321 429 109 210 3.59e-22 95.5
Msa0097770 AT2G39250.1 42.202 109 56 2 321 429 109 210 9.60e-22 96.3
Msa0097770 AT1G16060.2 63.793 58 21 0 394 451 1 58 8.31e-20 88.2
Msa0097770 AT1G16060.4 63.793 58 21 0 394 451 1 58 8.31e-20 88.2
Msa0097770 AT1G16060.6 63.793 58 21 0 394 451 1 58 8.31e-20 88.2
Msa0097770 AT1G16060.5 63.793 58 21 0 394 451 1 58 8.31e-20 88.2
Msa0097770 AT5G60120.6 46.032 126 60 3 317 442 157 274 2.23e-19 90.9
Msa0097770 AT5G60120.1 46.032 126 60 3 317 442 157 274 2.45e-19 90.9
Msa0097770 AT5G60120.2 46.032 126 60 3 317 442 157 274 2.69e-19 90.9
Msa0097770 AT5G60120.4 46.032 126 60 3 317 442 157 274 2.89e-19 90.1
Msa0097770 AT5G60120.3 46.032 126 60 3 317 442 157 274 2.89e-19 90.1
Msa0097770 AT5G60120.5 46.032 126 60 3 317 442 157 274 2.89e-19 90.1
Msa0097770 AT3G54320.2 65.517 58 20 0 394 451 1 58 3.24e-19 88.2
Msa0097770 AT3G54990.2 45.714 105 50 2 320 424 122 219 3.58e-18 84.3
Msa0097770 AT3G54990.1 45.714 105 50 2 320 424 122 219 1.29e-17 84.3
Msa0097770 AT2G28550.5 47.778 90 46 1 354 443 14 102 2.36e-15 76.6

Find 106 sgRNAs with CRISPR-Local

Find 216 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTTCTTGCTTCTTAAAA+AGG 0.138631 1_3:-3602790 None:intergenic
TGTTCTTCTTCTTCCATTAA+TGG 0.183802 1_3:-3603618 None:intergenic
TACATGTAAATGCTATTTAT+TGG 0.191382 1_3:-3605889 None:intergenic
GTAGATATGAAGCACATTTA+TGG 0.231221 1_3:+3604586 Msa0097770:CDS
CTTCCTTGGTGGTGCAACTA+TGG 0.232966 1_3:+3603425 Msa0097770:CDS
CCAAATCAGATTTCAGCTTC+TGG 0.236049 1_3:+3603843 Msa0097770:CDS
TTTAATTACATTTATTATAA+TGG 0.240644 1_3:+3606045 Msa0097770:three_prime_UTR
ATCTTGCTGCTCTCAAATAT+TGG 0.242252 1_3:+3604965 Msa0097770:CDS
CCAAGGAAGTCTTCTAGTTT+TGG 0.258754 1_3:-3603411 None:intergenic
TAGGCAGAGTTGCAGGAAAT+AGG 0.281271 1_3:+3605834 Msa0097770:CDS
CCAGAAGCTGAAATCTGATT+TGG 0.290373 1_3:-3603843 None:intergenic
CTCACCCTACCACATGAAAA+TGG 0.295821 1_3:+3602881 Msa0097770:CDS
GGTTCTGTGGGAACAGTTAA+TGG 0.296492 1_3:+3603753 Msa0097770:CDS
AACACTTCTTCATTATGTTA+TGG 0.325148 1_3:+3603053 Msa0097770:CDS
TCTTGCTGCTCTCAAATATT+GGG 0.326373 1_3:+3604966 Msa0097770:CDS
TATATAGAACAAACAAAGTT+TGG 0.327149 1_3:+3602612 Msa0097770:five_prime_UTR
TCTTCATTATGTTATGGTCT+TGG 0.331906 1_3:+3603059 Msa0097770:CDS
GATAGTAGTGATGATGATTT+TGG 0.340932 1_3:-3602950 None:intergenic
AGGAAAACTATTAGCACATT+TGG 0.344575 1_3:+3603936 Msa0097770:CDS
GGCTCCTAGAGATTATTCTT+TGG 0.352393 1_3:+3603680 Msa0097770:CDS
AACAATGGCTTTATTAAGCT+TGG 0.358555 1_3:+3603485 Msa0097770:CDS
TGTTGTCTATCAGGCATAGA+TGG 0.363633 1_3:+3604559 Msa0097770:intron
AAGAAGTGTTGTTCATGTTT+AGG 0.365644 1_3:-3603040 None:intergenic
TGATGGATCACTTTGCATAA+TGG 0.375080 1_3:+3603133 Msa0097770:CDS
AAGAGAAGAATGTTCTCTAT+TGG 0.375080 1_3:-3603544 None:intergenic
AAGAAATGAATAACATGAAT+AGG 0.381297 1_3:+3605237 Msa0097770:CDS
AATGTATCAAAATCCATTAA+TGG 0.381901 1_3:+3603605 Msa0097770:CDS
GCAAGGATAGGCAGAGTTGC+AGG 0.383894 1_3:+3605827 Msa0097770:CDS
CATTACACAGCCATAAATAA+TGG 0.389749 1_3:+3605915 Msa0097770:three_prime_UTR
TACTAAAGGTGGTTATGATA+TGG 0.390901 1_3:+3604918 Msa0097770:intron
GGAAATAGGGACCTTTATCT+TGG 0.391409 1_3:+3605848 Msa0097770:CDS
TAGATATGAAGCACATTTAT+GGG 0.394942 1_3:+3604587 Msa0097770:CDS
GCTATAAATACTTTCTTCCT+TGG 0.397257 1_3:-3603643 None:intergenic
TACTAAATGTTCCAAGATAA+AGG 0.401696 1_3:-3605859 None:intergenic
TCAGATTTAAGTGGCATCAT+AGG 0.407236 1_3:-3603113 None:intergenic
AATAATAGTGTTGGTAGTAT+TGG 0.414510 1_3:+3603723 Msa0097770:CDS
ATGATGGAAACAATCATAAC+TGG 0.417826 1_3:+3602844 Msa0097770:CDS
AGGCAGAGTTGCAGGAAATA+GGG 0.422847 1_3:+3605835 Msa0097770:CDS
GGAAAGACAAGTCAATGATT+AGG 0.424295 1_3:-3602742 None:intergenic
GGAAACAATCATAACTGGTT+AGG 0.431973 1_3:+3602849 Msa0097770:CDS
GAGAAGTTTATATGCGTTGA+AGG 0.446560 1_3:-3604991 None:intergenic
TTCAACGCATATAAACTTCT+CGG 0.459903 1_3:+3604993 Msa0097770:CDS
GATAGTAACATTAGTGATGA+TGG 0.467678 1_3:+3602828 Msa0097770:CDS
GGCACCACCAGCATGGTAGA+TGG 0.470143 1_3:+3605801 Msa0097770:intron
GTGGGAACAGTTAATGGTTG+TGG 0.486228 1_3:+3603759 Msa0097770:CDS
CTAAGCCTTTCTATGAGTCC+TGG 0.494679 1_3:+3603795 Msa0097770:CDS
GTTGGTAGTATTGGAGATGA+TGG 0.498430 1_3:+3603732 Msa0097770:CDS
AGGGGTGCTTCAATGTATAG+AGG 0.507777 1_3:+3605683 Msa0097770:CDS
AATGAATAACATGAATAGGC+AGG 0.510516 1_3:+3605241 Msa0097770:CDS
AATTTGAACTTTGTTACTGA+AGG 0.512391 1_3:-3602763 None:intergenic
TTGCTTGCCATCTACCATGC+TGG 0.513656 1_3:-3605808 None:intergenic
TGTAAATGCTATTTATTGGA+CGG 0.518214 1_3:-3605885 None:intergenic
CAAAGAACTTCTCAGTATAG+AGG 0.520883 1_3:+3603960 Msa0097770:CDS
AAGAGAGGACATGCTAAGGT+TGG 0.521241 1_3:+3603894 Msa0097770:CDS
AATGTTACTATCATTCATCA+TGG 0.522034 1_3:-3602817 None:intergenic
GACATCAAGTAAAAGTTTGA+AGG 0.522129 1_3:-3603008 None:intergenic
TTCCTTGGTGGTGCAACTAT+GGG 0.523268 1_3:+3603426 Msa0097770:CDS
CTCAGTATAGAGGAGTTACA+AGG 0.524809 1_3:+3603970 Msa0097770:CDS
AAGGAAGGGCAAACAAGGAA+AGG 0.527415 1_3:+3604624 Msa0097770:CDS
ACTCATAATCATGAATATGA+AGG 0.532843 1_3:+3603450 Msa0097770:CDS
CCAAAACTAGAAGACTTCCT+TGG 0.533305 1_3:+3603411 Msa0097770:CDS
TTAAGAAGATCCTTAGCACT+TGG 0.536372 1_3:+3605962 Msa0097770:three_prime_UTR
ATGATGCCACTTAAATCTGA+TGG 0.537511 1_3:+3603116 Msa0097770:CDS
TATTGGAGATGATGGTTCTG+TGG 0.544033 1_3:+3603740 Msa0097770:CDS
ACACAGCTTGATTGAGAACC+AGG 0.546355 1_3:-3603813 None:intergenic
GCAAGAAGGAAGGGCAAACA+AGG 0.547287 1_3:+3604619 Msa0097770:CDS
ATGGGATAACAGTTGCAAGA+AGG 0.549719 1_3:+3604605 Msa0097770:CDS
AGTGATCCATCAGATTTAAG+TGG 0.553050 1_3:-3603122 None:intergenic
TTGTTCATGTTTAGGTGTGA+AGG 0.554526 1_3:-3603032 None:intergenic
TTTGTTGTGCTCACAAGTGA+AGG 0.559343 1_3:+3602581 None:intergenic
GACAGAAGCAACCTGCTCAT+AGG 0.560917 1_3:+3603916 Msa0097770:CDS
TAAATGTGCTTCATATCTAC+CGG 0.561083 1_3:-3604583 None:intergenic
GAGAACCAGGACTCATAGAA+AGG 0.563571 1_3:-3603800 None:intergenic
GGGGTGCTTCAATGTATAGA+GGG 0.563963 1_3:+3605684 Msa0097770:CDS
CATAGGTAAAGAAGAATGAA+AGG 0.572850 1_3:-3603096 None:intergenic
GGTAGATGGCAAGCAAGGAT+AGG 0.573158 1_3:+3605815 Msa0097770:CDS
ATTTGAATGACCAAGTGCTA+AGG 0.574126 1_3:-3605972 None:intergenic
TCTATCAGGCATAGATGGAC+CGG 0.575721 1_3:+3604564 Msa0097770:intron
CATCAAGTGAATAATAGTGT+TGG 0.579792 1_3:+3603714 Msa0097770:CDS
AAACTAGAAGACTTCCTTGG+TGG 0.581740 1_3:+3603414 Msa0097770:CDS
CAATGTATAGAGGGGTGACA+AGG 0.582211 1_3:+3605693 Msa0097770:CDS
GATAACAGTTGCAAGAAGGA+AGG 0.582613 1_3:+3604609 Msa0097770:CDS
AATATGTTGCTCATTTGAGA+AGG 0.582799 1_3:+3605264 Msa0097770:CDS
AGCATGGTAGATGGCAAGCA+AGG 0.586051 1_3:+3605810 Msa0097770:CDS
CTAGGATGATGATGTTGAGA+AGG 0.590125 1_3:-3602921 None:intergenic
TGCTCCAAAGAATAATCTCT+AGG 0.594090 1_3:-3603684 None:intergenic
ATAAATGTAATTAAATGTGT+CGG 0.594920 1_3:-3606037 None:intergenic
TTGTGCTCACAAGTGAAGGA+AGG 0.598421 1_3:+3602585 Msa0097770:five_prime_UTR
GTTTGAAGGAACAACAGAAG+AGG 0.602261 1_3:-3602994 None:intergenic
TTGGTTTGCAGAAAGAGTAG+TGG 0.602923 1_3:+3605653 Msa0097770:intron
CTCACTAGATCACAATCTCA+AGG 0.609323 1_3:+3603164 Msa0097770:CDS
AGGACATGAAAGAGAAACAA+TGG 0.613993 1_3:+3603470 Msa0097770:CDS
CTTGCTGCTCTCAAATATTG+GGG 0.621666 1_3:+3604967 Msa0097770:CDS
GAAGGAACAACAGAAGAGGA+AGG 0.622143 1_3:-3602990 None:intergenic
ATAACAGTTGCAAGAAGGAA+GGG 0.625126 1_3:+3604610 Msa0097770:CDS
CTTGCCATCTACCATGCTGG+TGG 0.630256 1_3:-3605805 None:intergenic
ATATGGAAGAGAAAGCTGCA+AGG 0.633701 1_3:+3604935 Msa0097770:CDS
ATTGGAGATGATGGTTCTGT+GGG 0.634214 1_3:+3603741 Msa0097770:CDS
TGCTCACAAGTGAAGGAAGG+AGG 0.638349 1_3:+3602588 Msa0097770:five_prime_UTR
TATGGAAGAGAAAGCTGCAA+GGG 0.638891 1_3:+3604936 Msa0097770:CDS
TTCCCATAGTTGCACCACCA+AGG 0.640866 1_3:-3603428 None:intergenic
CAAACAAGGAAAGGAAGACA+AGG 0.651967 1_3:+3604633 Msa0097770:CDS
GGAAGAAGAAGAACAAACCA+AGG 0.657484 1_3:+3603626 Msa0097770:CDS
TTATGCAGGCACCACCAGCA+TGG 0.670111 1_3:+3605794 Msa0097770:intron
TAGGATGATGATGTTGAGAA+GGG 0.683404 1_3:-3602920 None:intergenic
GGGTGCTTCAATGTATAGAG+GGG 0.696881 1_3:+3605685 Msa0097770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTAAAAAAATAAT+CGG - chr1_3:3605125-3605144 None:intergenic 0.0%
!!! GTAAAATATTTAAGAATTTT+TGG - chr1_3:3604666-3604685 None:intergenic 10.0%
!!! CATTTTTAAATAATCTATAA+AGG - chr1_3:3605747-3605766 None:intergenic 10.0%
!! AAAGAAAGAAAATAAACATA+TGG - chr1_3:3603202-3603221 None:intergenic 15.0%
!! CAACTTAAAACTAAAAAAAA+TGG - chr1_3:3603255-3603274 None:intergenic 15.0%
!!! TTTTATTTATTAACATGTGT+GGG - chr1_3:3604318-3604337 None:intergenic 15.0%
!!! TTTTTATTTATTAACATGTG+TGG - chr1_3:3604319-3604338 None:intergenic 15.0%
!! AAAAAATAGATCTATGAAAA+AGG - chr1_3:3604836-3604855 None:intergenic 15.0%
!! ATAAATGTAATTAAATGTGT+CGG - chr1_3:3606040-3606059 None:intergenic 15.0%
!! TATATAGAACAAACAAAGTT+TGG + chr1_3:3602612-3602631 Msa0097770:five_prime_UTR 20.0%
!! CTATAACAATCAATTCAAAA+TGG - chr1_3:3603371-3603390 None:intergenic 20.0%
!! AATGTATCAAAATCCATTAA+TGG + chr1_3:3603605-3603624 Msa0097770:CDS 20.0%
!!! AATAAGCTCTAATTATTAGT+GGG - chr1_3:3604032-3604051 None:intergenic 20.0%
!!! AAATAAGCTCTAATTATTAG+TGG - chr1_3:3604033-3604052 None:intergenic 20.0%
!! TTTATTTATTAACATGTGTG+GGG - chr1_3:3604317-3604336 None:intergenic 20.0%
!!! TAATATATTGACTTGTTTTG+AGG + chr1_3:3604367-3604386 Msa0097770:intron 20.0%
!! GATGACAAATAATTGAAATA+AGG - chr1_3:3604411-3604430 None:intergenic 20.0%
!!! CTTTTTACATCTGAAAATAT+TGG + chr1_3:3604706-3604725 Msa0097770:intron 20.0%
!!! GTTTGTTAAAATGTTACTAA+AGG + chr1_3:3604904-3604923 Msa0097770:intron 20.0%
!! AAGAAATGAATAACATGAAT+AGG + chr1_3:3605237-3605256 Msa0097770:CDS 20.0%
!! TTAGTCTCTTAGAATAATAA+AGG + chr1_3:3605362-3605381 Msa0097770:intron 20.0%
!!! AATGATTTTGTACTAACTTT+AGG + chr1_3:3605763-3605782 Msa0097770:intron 20.0%
!!! TACATGTAAATGCTATTTAT+TGG - chr1_3:3605892-3605911 None:intergenic 20.0%
!! CTAAAAAAGTCCATTATTTA+TGG - chr1_3:3605928-3605947 None:intergenic 20.0%
!!! CATAAATAATGGACTTTTTT+AGG + chr1_3:3605926-3605945 Msa0097770:three_prime_UTR 20.0%
! AAAAACACAAATGTTCAACT+TGG - chr1_3:3602698-3602717 None:intergenic 25.0%
! AATTTGAACTTTGTTACTGA+AGG - chr1_3:3602766-3602785 None:intergenic 25.0%
! AATGTTACTATCATTCATCA+TGG - chr1_3:3602820-3602839 None:intergenic 25.0%
! AACACTTCTTCATTATGTTA+TGG + chr1_3:3603053-3603072 Msa0097770:CDS 25.0%
! ACTCATAATCATGAATATGA+AGG + chr1_3:3603450-3603469 Msa0097770:CDS 25.0%
! AACCTGAAAAATATGAAGAA+TGG - chr1_3:3603572-3603591 None:intergenic 25.0%
! TTATAGCTTCAAAAACTTTG+TGG + chr1_3:3603659-3603678 Msa0097770:CDS 25.0%
!!! AATAATAGTGTTGGTAGTAT+TGG + chr1_3:3603723-3603742 Msa0097770:CDS 25.0%
! TGGTTTATAGAACAAAATAG+AGG - chr1_3:3604077-3604096 None:intergenic 25.0%
!!! TCTATAAACCAAAGTTGATA+TGG + chr1_3:3604086-3604105 Msa0097770:intron 25.0%
! TTCAACCTTAGTGTTTATAT+CGG + chr1_3:3604160-3604179 Msa0097770:intron 25.0%
! TTATTTATTAACATGTGTGG+GGG - chr1_3:3604316-3604335 None:intergenic 25.0%
! TGATGAGAAAGTTTCAAAAA+TGG + chr1_3:3604462-3604481 Msa0097770:intron 25.0%
! TAGATATGAAGCACATTTAT+GGG + chr1_3:3604587-3604606 Msa0097770:CDS 25.0%
! ATTGTACATCACAGTTTATT+TGG + chr1_3:3604797-3604816 Msa0097770:intron 25.0%
! TTGTACATCACAGTTTATTT+GGG + chr1_3:3604798-3604817 Msa0097770:intron 25.0%
! CCATATATATCAGATATAGT+GGG - chr1_3:3604875-3604894 None:intergenic 25.0%
! ACCATATATATCAGATATAG+TGG - chr1_3:3604876-3604895 None:intergenic 25.0%
! TGTTAAAATGTTACTAAAGG+TGG + chr1_3:3604907-3604926 Msa0097770:intron 25.0%
! TTTAAAAAAATAATCGGGCA+AGG - chr1_3:3605119-3605138 None:intergenic 25.0%
! CTAATTGCCTTTATTATCTT+TGG + chr1_3:3605186-3605205 Msa0097770:intron 25.0%
!!! ACTTACTAACTTGCTATTAT+TGG + chr1_3:3605294-3605313 Msa0097770:intron 25.0%
! AACAAAGTAATTAGAGTGAA+GGG - chr1_3:3605577-3605596 None:intergenic 25.0%
!! ATATGATGATACTAAGCTTT+TGG + chr1_3:3605630-3605649 Msa0097770:intron 25.0%
! CTATAAAGGAAAATAGACAT+AGG - chr1_3:3605733-3605752 None:intergenic 25.0%
!! TTTAGGTTTAAATGTTATGC+AGG + chr1_3:3605780-3605799 Msa0097770:intron 25.0%
! TACTAAATGTTCCAAGATAA+AGG - chr1_3:3605862-3605881 None:intergenic 25.0%
!! TGTAAATGCTATTTATTGGA+CGG - chr1_3:3605888-3605907 None:intergenic 25.0%
!!! GACTTTTTTAGGTAATAACT+TGG + chr1_3:3605937-3605956 Msa0097770:three_prime_UTR 25.0%
CATCTTCTTGCTTCTTAAAA+AGG - chr1_3:3602793-3602812 None:intergenic 30.0%
GATAGTAACATTAGTGATGA+TGG + chr1_3:3602828-3602847 Msa0097770:CDS 30.0%
! ATGATGGAAACAATCATAAC+TGG + chr1_3:3602844-3602863 Msa0097770:CDS 30.0%
!! GATAGTAGTGATGATGATTT+TGG - chr1_3:3602953-3602972 None:intergenic 30.0%
GACATCAAGTAAAAGTTTGA+AGG - chr1_3:3603011-3603030 None:intergenic 30.0%
!! AAGAAGTGTTGTTCATGTTT+AGG - chr1_3:3603043-3603062 None:intergenic 30.0%
TCTTCATTATGTTATGGTCT+TGG + chr1_3:3603059-3603078 Msa0097770:CDS 30.0%
CATAGGTAAAGAAGAATGAA+AGG - chr1_3:3603099-3603118 None:intergenic 30.0%
!! AACAATGGCTTTATTAAGCT+TGG + chr1_3:3603485-3603504 Msa0097770:CDS 30.0%
AAGAGAAGAATGTTCTCTAT+TGG - chr1_3:3603547-3603566 None:intergenic 30.0%
! GACCATTCTTCATATTTTTC+AGG + chr1_3:3603567-3603586 Msa0097770:CDS 30.0%
!!! TTTTCAGGTTTTTCTTGTCA+TGG + chr1_3:3603582-3603601 Msa0097770:CDS 30.0%
TGTTCTTCTTCTTCCATTAA+TGG - chr1_3:3603621-3603640 None:intergenic 30.0%
GCTATAAATACTTTCTTCCT+TGG - chr1_3:3603646-3603665 None:intergenic 30.0%
CATCAAGTGAATAATAGTGT+TGG + chr1_3:3603714-3603733 Msa0097770:CDS 30.0%
AGGAAAACTATTAGCACATT+TGG + chr1_3:3603936-3603955 Msa0097770:CDS 30.0%
TCAACCTTAGTGTTTATATC+GGG + chr1_3:3604161-3604180 Msa0097770:intron 30.0%
TATTTATTAACATGTGTGGG+GGG - chr1_3:3604315-3604334 None:intergenic 30.0%
GAATTCGAATGGTTTAACTA+TGG - chr1_3:3604442-3604461 None:intergenic 30.0%
!!! GGTTTTAATTTTATGAGCCT+TGG + chr1_3:3604483-3604502 Msa0097770:intron 30.0%
AACAACTAAAACAATTGCCA+AGG - chr1_3:3604503-3604522 None:intergenic 30.0%
!! TTGTTTGTTTGTTGTCTATC+AGG + chr1_3:3604550-3604569 Msa0097770:intron 30.0%
TAAATGTGCTTCATATCTAC+CGG - chr1_3:3604586-3604605 None:intergenic 30.0%
GTAGATATGAAGCACATTTA+TGG + chr1_3:3604586-3604605 Msa0097770:CDS 30.0%
! TATCAGATATAGTGGGAATA+GGG - chr1_3:3604868-3604887 None:intergenic 30.0%
! ATATCAGATATAGTGGGAAT+AGG - chr1_3:3604869-3604888 None:intergenic 30.0%
CCCACTATATCTGATATATA+TGG + chr1_3:3604872-3604891 Msa0097770:intron 30.0%
TACTAAAGGTGGTTATGATA+TGG + chr1_3:3604918-3604937 Msa0097770:intron 30.0%
TTCAACGCATATAAACTTCT+CGG + chr1_3:3604993-3605012 Msa0097770:CDS 30.0%
! AAATCGAGCGAAATTTTTAC+TGG + chr1_3:3605145-3605164 Msa0097770:intron 30.0%
ATAAAGGCAATTAGACTCTA+AGG - chr1_3:3605180-3605199 None:intergenic 30.0%
CAATCTGCCAAAGATAATAA+AGG - chr1_3:3605196-3605215 None:intergenic 30.0%
AATGAATAACATGAATAGGC+AGG + chr1_3:3605241-3605260 Msa0097770:CDS 30.0%
AATATGTTGCTCATTTGAGA+AGG + chr1_3:3605264-3605283 Msa0097770:CDS 30.0%
!!! AGATGATGCATTTTTTCTCA+AGG - chr1_3:3605339-3605358 None:intergenic 30.0%
AAGTAAAGACTAAGTTGTCT+CGG + chr1_3:3605465-3605484 Msa0097770:intron 30.0%
!!! TTGTGTTAGCCATTTTTTCT+TGG + chr1_3:3605539-3605558 Msa0097770:intron 30.0%
!!! TGTGTTAGCCATTTTTTCTT+GGG + chr1_3:3605540-3605559 Msa0097770:intron 30.0%
TTGTGATACCCAAGAAAAAA+TGG - chr1_3:3605551-3605570 None:intergenic 30.0%
CAACAAAGTAATTAGAGTGA+AGG - chr1_3:3605578-3605597 None:intergenic 30.0%
!! AAAGAGTAGTGGTTTTTCAA+GGG + chr1_3:3605664-3605683 Msa0097770:CDS 30.0%
CATTACACAGCCATAAATAA+TGG + chr1_3:3605915-3605934 Msa0097770:three_prime_UTR 30.0%
!!! CAAAGTCTCATCAACTTTTT+TGG + chr1_3:3605996-3606015 Msa0097770:three_prime_UTR 30.0%
GGAAAGACAAGTCAATGATT+AGG - chr1_3:3602745-3602764 None:intergenic 35.0%
GGAAACAATCATAACTGGTT+AGG + chr1_3:3602849-3602868 Msa0097770:CDS 35.0%
! AAGTAAGCTCCATTTTCATG+TGG - chr1_3:3602893-3602912 None:intergenic 35.0%
! TAGGATGATGATGTTGAGAA+GGG - chr1_3:3602923-3602942 None:intergenic 35.0%
!!! TGATGATTTTGGTGATGACT+AGG - chr1_3:3602942-3602961 None:intergenic 35.0%
TTGTTCATGTTTAGGTGTGA+AGG - chr1_3:3603035-3603054 None:intergenic 35.0%
TCAGATTTAAGTGGCATCAT+AGG - chr1_3:3603116-3603135 None:intergenic 35.0%
! ATGATGCCACTTAAATCTGA+TGG + chr1_3:3603116-3603135 Msa0097770:CDS 35.0%
AGTGATCCATCAGATTTAAG+TGG - chr1_3:3603125-3603144 None:intergenic 35.0%
! TGATGGATCACTTTGCATAA+TGG + chr1_3:3603133-3603152 Msa0097770:CDS 35.0%
!!! TCTAGTTTTGGAGATGAAGT+TGG - chr1_3:3603402-3603421 None:intergenic 35.0%
AGGACATGAAAGAGAAACAA+TGG + chr1_3:3603470-3603489 Msa0097770:CDS 35.0%
TGCTCCAAAGAATAATCTCT+AGG - chr1_3:3603687-3603706 None:intergenic 35.0%
GTTGTTGAAGCTAAAAAGAG+AGG + chr1_3:3603879-3603898 Msa0097770:CDS 35.0%
TAAAAAGAGAGGACATGCTA+AGG + chr1_3:3603890-3603909 Msa0097770:CDS 35.0%
! CTAATAGTTTTCCTATGAGC+AGG - chr1_3:3603930-3603949 None:intergenic 35.0%
CAAAGAACTTCTCAGTATAG+AGG + chr1_3:3603960-3603979 Msa0097770:CDS 35.0%
TTTAGCAACGAGATCAAACT+AGG + chr1_3:3604127-3604146 Msa0097770:intron 35.0%
TTAGCAACGAGATCAAACTA+GGG + chr1_3:3604128-3604147 Msa0097770:intron 35.0%
AGATCAAACTAGGGTTGAAA+CGG + chr1_3:3604137-3604156 Msa0097770:intron 35.0%
CTTGTGTGACATTAATGTCA+CGG + chr1_3:3604206-3604225 Msa0097770:intron 35.0%
ATTAAATCTGGACCACACAT+TGG + chr1_3:3604233-3604252 Msa0097770:intron 35.0%
TTAAATCTGGACCACACATT+GGG + chr1_3:3604234-3604253 Msa0097770:intron 35.0%
TGGTTTAACTATGGTCGAAT+CGG - chr1_3:3604433-3604452 None:intergenic 35.0%
CTTTCTCATCAGAATTCGAA+TGG - chr1_3:3604453-3604472 None:intergenic 35.0%
ATAACAGTTGCAAGAAGGAA+GGG + chr1_3:3604610-3604629 Msa0097770:CDS 35.0%
GTTGACACAGTTCAGAATAA+TGG - chr1_3:3604733-3604752 None:intergenic 35.0%
ATCTTGCTGCTCTCAAATAT+TGG + chr1_3:3604965-3604984 Msa0097770:CDS 35.0%
TCTTGCTGCTCTCAAATATT+GGG + chr1_3:3604966-3604985 Msa0097770:CDS 35.0%
GAGAAGTTTATATGCGTTGA+AGG - chr1_3:3604994-3605013 None:intergenic 35.0%
!! TCTTTGAGACAGTTGCAAAA+TGG + chr1_3:3605059-3605078 Msa0097770:intron 35.0%
GACAGTTGCAAAATGGTTAT+CGG + chr1_3:3605066-3605085 Msa0097770:intron 35.0%
!! AACTTGCTATTATTGGAGTG+AGG + chr1_3:3605301-3605320 Msa0097770:intron 35.0%
TCCCTAGAGACAAATAAGTT+GGG + chr1_3:3605396-3605415 Msa0097770:intron 35.0%
TCCCAACTTATTTGTCTCTA+GGG - chr1_3:3605400-3605419 None:intergenic 35.0%
! GATGATACTAAGCTTTTGGT+TGG + chr1_3:3605634-3605653 Msa0097770:intron 35.0%
! GAAAGAGTAGTGGTTTTTCA+AGG + chr1_3:3605663-3605682 Msa0097770:intron 35.0%
!!! AAGAGTAGTGGTTTTTCAAG+GGG + chr1_3:3605665-3605684 Msa0097770:CDS 35.0%
TTAAGAAGATCCTTAGCACT+TGG + chr1_3:3605962-3605981 Msa0097770:three_prime_UTR 35.0%
ATTTGAATGACCAAGTGCTA+AGG - chr1_3:3605975-3605994 None:intergenic 35.0%
! AGCTCCATTTTCATGTGGTA+GGG - chr1_3:3602888-3602907 None:intergenic 40.0%
! AAGCTCCATTTTCATGTGGT+AGG - chr1_3:3602889-3602908 None:intergenic 40.0%
! CTAGGATGATGATGTTGAGA+AGG - chr1_3:3602924-3602943 None:intergenic 40.0%
GTTTGAAGGAACAACAGAAG+AGG - chr1_3:3602997-3603016 None:intergenic 40.0%
CTCACTAGATCACAATCTCA+AGG + chr1_3:3603164-3603183 Msa0097770:CDS 40.0%
!!! CCAAGGAAGTCTTCTAGTTT+TGG - chr1_3:3603414-3603433 None:intergenic 40.0%
CCAAAACTAGAAGACTTCCT+TGG + chr1_3:3603411-3603430 Msa0097770:CDS 40.0%
AAACTAGAAGACTTCCTTGG+TGG + chr1_3:3603414-3603433 Msa0097770:CDS 40.0%
GGAAGAAGAAGAACAAACCA+AGG + chr1_3:3603626-3603645 Msa0097770:CDS 40.0%
GGCTCCTAGAGATTATTCTT+TGG + chr1_3:3603680-3603699 Msa0097770:CDS 40.0%
!! GTTGGTAGTATTGGAGATGA+TGG + chr1_3:3603732-3603751 Msa0097770:CDS 40.0%
! TATTGGAGATGATGGTTCTG+TGG + chr1_3:3603740-3603759 Msa0097770:CDS 40.0%
! ATTGGAGATGATGGTTCTGT+GGG + chr1_3:3603741-3603760 Msa0097770:CDS 40.0%
CCAGAAGCTGAAATCTGATT+TGG - chr1_3:3603846-3603865 None:intergenic 40.0%
CCAAATCAGATTTCAGCTTC+TGG + chr1_3:3603843-3603862 Msa0097770:CDS 40.0%
CTCAGTATAGAGGAGTTACA+AGG + chr1_3:3603970-3603989 Msa0097770:CDS 40.0%
TCAGCTAGCCATATCAACTT+TGG - chr1_3:3604097-3604116 None:intergenic 40.0%
! AGTTGATATGGCTAGCTGAT+TGG + chr1_3:3604098-3604117 Msa0097770:intron 40.0%
AAGGCCCGATATAAACACTA+AGG - chr1_3:3604168-3604187 None:intergenic 40.0%
TGTCACGGTGACATTAAATC+TGG + chr1_3:3604221-3604240 Msa0097770:intron 40.0%
ATCTAATGTCACCCAATGTG+TGG - chr1_3:3604248-3604267 None:intergenic 40.0%
GTGACATTAGATGTGTTGTG+TGG + chr1_3:3604256-3604275 Msa0097770:intron 40.0%
ATGGCACGGTGACATTAATA+AGG + chr1_3:3604289-3604308 Msa0097770:intron 40.0%
TGTTGTCTATCAGGCATAGA+TGG + chr1_3:3604559-3604578 Msa0097770:intron 40.0%
ATGGGATAACAGTTGCAAGA+AGG + chr1_3:3604605-3604624 Msa0097770:CDS 40.0%
GATAACAGTTGCAAGAAGGA+AGG + chr1_3:3604609-3604628 Msa0097770:CDS 40.0%
CAAACAAGGAAAGGAAGACA+AGG + chr1_3:3604633-3604652 Msa0097770:CDS 40.0%
CATGTCACATGTTCACATTG+TGG + chr1_3:3604756-3604775 Msa0097770:intron 40.0%
ATATGGAAGAGAAAGCTGCA+AGG + chr1_3:3604935-3604954 Msa0097770:CDS 40.0%
TATGGAAGAGAAAGCTGCAA+GGG + chr1_3:3604936-3604955 Msa0097770:CDS 40.0%
CTTGCTGCTCTCAAATATTG+GGG + chr1_3:3604967-3604986 Msa0097770:CDS 40.0%
! TTTTTCTCAAGGACCACAGT+GGG - chr1_3:3605328-3605347 None:intergenic 40.0%
!!! TTTTTTCTCAAGGACCACAG+TGG - chr1_3:3605329-3605348 None:intergenic 40.0%
GTCCCTAGAGACAAATAAGT+TGG + chr1_3:3605395-3605414 Msa0097770:intron 40.0%
GTCCCAACTTATTTGTCTCT+AGG - chr1_3:3605401-3605420 None:intergenic 40.0%
!! TTGGTTTGCAGAAAGAGTAG+TGG + chr1_3:3605653-3605672 Msa0097770:intron 40.0%
GGAAATAGGGACCTTTATCT+TGG + chr1_3:3605848-3605867 Msa0097770:CDS 40.0%
TTGTGCTCACAAGTGAAGGA+AGG + chr1_3:3602585-3602604 Msa0097770:five_prime_UTR 45.0%
CTCACCCTACCACATGAAAA+TGG + chr1_3:3602881-3602900 Msa0097770:CDS 45.0%
GAAGGAACAACAGAAGAGGA+AGG - chr1_3:3602993-3603012 None:intergenic 45.0%
!! TTCCTTGGTGGTGCAACTAT+GGG + chr1_3:3603426-3603445 Msa0097770:CDS 45.0%
GGTTCTGTGGGAACAGTTAA+TGG + chr1_3:3603753-3603772 Msa0097770:CDS 45.0%
GTGGGAACAGTTAATGGTTG+TGG + chr1_3:3603759-3603778 Msa0097770:CDS 45.0%
CTAAGCCTTTCTATGAGTCC+TGG + chr1_3:3603795-3603814 Msa0097770:CDS 45.0%
GAGAACCAGGACTCATAGAA+AGG - chr1_3:3603803-3603822 None:intergenic 45.0%
ACACAGCTTGATTGAGAACC+AGG - chr1_3:3603816-3603835 None:intergenic 45.0%
AAGAGAGGACATGCTAAGGT+TGG + chr1_3:3603894-3603913 Msa0097770:CDS 45.0%
TGTTTATATCGGGCCTTACC+TGG + chr1_3:3604171-3604190 Msa0097770:intron 45.0%
TCTATCAGGCATAGATGGAC+CGG + chr1_3:3604564-3604583 Msa0097770:intron 45.0%
AAGGAAGGGCAAACAAGGAA+AGG + chr1_3:3604624-3604643 Msa0097770:CDS 45.0%
CGGTATGTTTCACGACATAG+TGG + chr1_3:3605013-3605032 Msa0097770:intron 45.0%
!! AGGGGTGCTTCAATGTATAG+AGG + chr1_3:3605683-3605702 Msa0097770:CDS 45.0%
! GGGGTGCTTCAATGTATAGA+GGG + chr1_3:3605684-3605703 Msa0097770:CDS 45.0%
GGGTGCTTCAATGTATAGAG+GGG + chr1_3:3605685-3605704 Msa0097770:CDS 45.0%
CAATGTATAGAGGGGTGACA+AGG + chr1_3:3605693-3605712 Msa0097770:CDS 45.0%
TAGGCAGAGTTGCAGGAAAT+AGG + chr1_3:3605834-3605853 Msa0097770:CDS 45.0%
AGGCAGAGTTGCAGGAAATA+GGG + chr1_3:3605835-3605854 Msa0097770:CDS 45.0%
!!! TTTTTTTTAAAAAAATAATC+GGG - chr1_3:3605124-3605143 None:intergenic 5.0%
TGCTCACAAGTGAAGGAAGG+AGG + chr1_3:3602588-3602607 Msa0097770:five_prime_UTR 50.0%
!! CTTCCTTGGTGGTGCAACTA+TGG + chr1_3:3603425-3603444 Msa0097770:CDS 50.0%
TTCCCATAGTTGCACCACCA+AGG - chr1_3:3603431-3603450 None:intergenic 50.0%
GACAGAAGCAACCTGCTCAT+AGG + chr1_3:3603916-3603935 Msa0097770:CDS 50.0%
GTATTTCCCTTCGCCAGGTA+AGG - chr1_3:3604187-3604206 None:intergenic 50.0%
CACAAGTATTTCCCTTCGCC+AGG - chr1_3:3604192-3604211 None:intergenic 50.0%
GCAAGAAGGAAGGGCAAACA+AGG + chr1_3:3604619-3604638 Msa0097770:CDS 50.0%
TTGCTTGCCATCTACCATGC+TGG - chr1_3:3605811-3605830 None:intergenic 50.0%
AGCATGGTAGATGGCAAGCA+AGG + chr1_3:3605810-3605829 Msa0097770:CDS 50.0%
GGTAGATGGCAAGCAAGGAT+AGG + chr1_3:3605815-3605834 Msa0097770:CDS 50.0%
GTTGTGTGGCCCAGATGCAA+TGG + chr1_3:3604270-3604289 Msa0097770:intron 55.0%
! GTCACCGTGCCATTGCATCT+GGG - chr1_3:3604282-3604301 None:intergenic 55.0%
! TGTCACCGTGCCATTGCATC+TGG - chr1_3:3604283-3604302 None:intergenic 55.0%
ATTGGAGTGAGGACCCACTG+TGG + chr1_3:3605312-3605331 Msa0097770:intron 55.0%
TTATGCAGGCACCACCAGCA+TGG + chr1_3:3605794-3605813 Msa0097770:intron 55.0%
CTTGCCATCTACCATGCTGG+TGG - chr1_3:3605808-3605827 None:intergenic 55.0%
GCAAGGATAGGCAGAGTTGC+AGG + chr1_3:3605827-3605846 Msa0097770:CDS 55.0%
TATCGGGCCTTACCTGGCGA+AGG + chr1_3:3604177-3604196 Msa0097770:intron 60.0%
ATCGGGCCTTACCTGGCGAA+GGG + chr1_3:3604178-3604197 Msa0097770:intron 60.0%
GTGGCCCAGATGCAATGGCA+CGG + chr1_3:3604275-3604294 Msa0097770:intron 60.0%
GGCACCACCAGCATGGTAGA+TGG + chr1_3:3605801-3605820 Msa0097770:intron 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 3602584 3606064 3602584 ID=Msa0097770;Name=Msa0097770
chr1_3 mRNA 3602584 3606064 3602584 ID=Msa0097770-mRNA-1;Parent=Msa0097770;Name=Msa0097770-mRNA-1;_AED=0.05;_eAED=0.05;_QI=226|0.83|0.85|1|1|1|7|169|455
chr1_3 exon 3602584 3603185 3602584 ID=Msa0097770-mRNA-1:exon:1117;Parent=Msa0097770-mRNA-1
chr1_3 exon 3603391 3603991 3603391 ID=Msa0097770-mRNA-1:exon:1118;Parent=Msa0097770-mRNA-1
chr1_3 exon 3604572 3604654 3604572 ID=Msa0097770-mRNA-1:exon:1119;Parent=Msa0097770-mRNA-1
chr1_3 exon 3604926 3605014 3604926 ID=Msa0097770-mRNA-1:exon:1120;Parent=Msa0097770-mRNA-1
chr1_3 exon 3605212 3605285 3605212 ID=Msa0097770-mRNA-1:exon:1121;Parent=Msa0097770-mRNA-1
chr1_3 exon 3605664 3605714 3605664 ID=Msa0097770-mRNA-1:exon:1122;Parent=Msa0097770-mRNA-1
chr1_3 exon 3605802 3606064 3605802 ID=Msa0097770-mRNA-1:exon:1123;Parent=Msa0097770-mRNA-1
chr1_3 five_prime_UTR 3602584 3602809 3602584 ID=Msa0097770-mRNA-1:five_prime_utr;Parent=Msa0097770-mRNA-1
chr1_3 CDS 3602810 3603185 3602810 ID=Msa0097770-mRNA-1:cds;Parent=Msa0097770-mRNA-1
chr1_3 CDS 3603391 3603991 3603391 ID=Msa0097770-mRNA-1:cds;Parent=Msa0097770-mRNA-1
chr1_3 CDS 3604572 3604654 3604572 ID=Msa0097770-mRNA-1:cds;Parent=Msa0097770-mRNA-1
chr1_3 CDS 3604926 3605014 3604926 ID=Msa0097770-mRNA-1:cds;Parent=Msa0097770-mRNA-1
chr1_3 CDS 3605212 3605285 3605212 ID=Msa0097770-mRNA-1:cds;Parent=Msa0097770-mRNA-1
chr1_3 CDS 3605664 3605714 3605664 ID=Msa0097770-mRNA-1:cds;Parent=Msa0097770-mRNA-1
chr1_3 CDS 3605802 3605895 3605802 ID=Msa0097770-mRNA-1:cds;Parent=Msa0097770-mRNA-1
chr1_3 three_prime_UTR 3605896 3606064 3605896 ID=Msa0097770-mRNA-1:three_prime_utr;Parent=Msa0097770-mRNA-1
Gene Sequence

>Msa0097770

ATGAAGTCCATGATGAATGATAGTAACATTAGTGATGATGGAAACAATCATAACTGGTTAGGATTCTCTCTCTCACCCTACCACATGAAAATGGAGCTTACTTCTTCTGACCCTTCTCAACATCATCATCCTAGTCATCACCAAAATCATCATCACTACTATCATCATCATGACAATCAACCTTCCTCTTCTGTTGTTCCTTCAAACTTTTACTTGATGTCACCTTCACACCTAAACATGAACAACACTTCTTCATTATGTTATGGTCTTGGAGAAAACAACAATTCCTTTCATTCTTCTTTACCTATGATGCCACTTAAATCTGATGGATCACTTTGCATAATGGAAGAAGCTCTCACTAGATCACAATCTCAAGTGATGATGCCAACTTCATCTCCAAAACTAGAAGACTTCCTTGGTGGTGCAACTATGGGAACTCATAATCATGAATATGAAGGACATGAAAGAGAAACAATGGCTTTATTAAGCTTGGACAGCATCTACTATAACAACAATGCAGAACATGAAACCAATAGAGAACATTCTTCTCTTGACCATTCTTCATATTTTTCAGGTTTTTCTTGTCATGGAATGTATCAAAATCCATTAATGGAAGAAGAAGAACAAACCAAGGAAGAAAGTATTTATAGCTTCAAAAACTTTGTGGCTCCTAGAGATTATTCTTTGGAGCAACATCATCATCAAGTGAATAATAGTGTTGGTAGTATTGGAGATGATGGTTCTGTGGGAACAGTTAATGGTTGTGGAGAGTTACAAACTCTAAGCCTTTCTATGAGTCCTGGTTCTCAATCAAGCTGTGTTACTGTTCCAAATCAGATTTCAGCTTCTGGAACTGATTCAGTAGTTGTTGAAGCTAAAAAGAGAGGACATGCTAAGGTTGGACAGAAGCAACCTGCTCATAGGAAAACTATTAGCACATTTGGTCAAAGAACTTCTCAGTATAGAGGAGTTACAAGGCATAGATGGACCGGTAGATATGAAGCACATTTATGGGATAACAGTTGCAAGAAGGAAGGGCAAACAAGGAAAGGAAGACAAGGTGGTTATGATATGGAAGAGAAAGCTGCAAGGGCTTATGATCTTGCTGCTCTCAAATATTGGGGACCTTCAACGCATATAAACTTCTCGATTGAAATTTACAAAAATGAACTCGAAGAAATGAATAACATGAATAGGCAGGAATATGTTGCTCATTTGAGAAGAAAGAGTAGTGGTTTTTCAAGGGGTGCTTCAATGTATAGAGGGGTGACAAGGCACCACCAGCATGGTAGATGGCAAGCAAGGATAGGCAGAGTTGCAGGAAATAGGGACCTTTATCTTGGAACATTTAGTAAGTCCGTCCAATAA

Protein sequence

>Msa0097770

MKSMMNDSNISDDGNNHNWLGFSLSPYHMKMELTSSDPSQHHHPSHHQNHHHYYHHHDNQPSSSVVPSNFYLMSPSHLNMNNTSSLCYGLGENNNSFHSSLPMMPLKSDGSLCIMEEALTRSQSQVMMPTSSPKLEDFLGGATMGTHNHEYEGHERETMALLSLDSIYYNNNAEHETNREHSSLDHSSYFSGFSCHGMYQNPLMEEEEQTKEESIYSFKNFVAPRDYSLEQHHHQVNNSVGSIGDDGSVGTVNGCGELQTLSLSMSPGSQSSCVTVPNQISASGTDSVVVEAKKRGHAKVGQKQPAHRKTISTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFSIEIYKNELEEMNNMNRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNRDLYLGTFSKSVQ*