Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251930 | XP_013446111.1 | 92.438 | 767 | 57 | 1 | 1 | 767 | 1 | 766 | 0.0 | 1392 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251930 | sp|P0CB23|Y4862_ARATH | 46.316 | 570 | 290 | 5 | 1 | 569 | 1 | 555 | 1.76e-127 | 409 |
| Msa1251930 | sp|P0CB23|Y4862_ARATH | 42.523 | 214 | 79 | 2 | 481 | 666 | 634 | 831 | 5.82e-29 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251930 | A0A072TTF3 | 92.438 | 767 | 57 | 1 | 1 | 767 | 1 | 766 | 0.0 | 1392 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa1251930 | 0.810111 | 1.355712e-50 | -8.615850e-47 |
| Msa0018000 | Msa1251930 | 0.807335 | 5.315519e-50 | -8.615850e-47 |
| Msa0021500 | Msa1251930 | 0.822554 | 2.225766e-53 | -8.615850e-47 |
| Msa0024550 | Msa1251930 | 0.810539 | 1.096245e-50 | -8.615850e-47 |
| Msa0027820 | Msa1251930 | 0.811810 | 5.810931e-51 | -8.615850e-47 |
| Msa0043620 | Msa1251930 | 0.807562 | 4.758040e-50 | -8.615850e-47 |
| Msa0094780 | Msa1251930 | 0.826093 | 3.276779e-54 | -8.615850e-47 |
| Msa0120400 | Msa1251930 | 0.813034 | 3.139277e-51 | -8.615850e-47 |
| Msa0624900 | Msa1251930 | 0.819185 | 1.326220e-52 | -8.615850e-47 |
| Msa0626450 | Msa1251930 | 0.827393 | 1.603419e-54 | -8.615850e-47 |
| Msa0626490 | Msa1251930 | 0.826565 | 2.529749e-54 | -8.615850e-47 |
| Msa0626510 | Msa1251930 | 0.809828 | 1.560292e-50 | -8.615850e-47 |
| Msa0662240 | Msa1251930 | 0.826776 | 2.252968e-54 | -8.615850e-47 |
| Msa0664600 | Msa1251930 | 0.827413 | 1.585808e-54 | -8.615850e-47 |
| Msa0677410 | Msa1251930 | 0.819610 | 1.060818e-52 | -8.615850e-47 |
| Msa0712110 | Msa1251930 | 0.804167 | 2.459602e-49 | -8.615850e-47 |
| Msa0721080 | Msa1251930 | 0.811941 | 5.442612e-51 | -8.615850e-47 |
| Msa0739730 | Msa1251930 | 0.804345 | 2.258361e-49 | -8.615850e-47 |
| Msa0772710 | Msa1251930 | 0.800324 | 1.520608e-48 | -8.615850e-47 |
| Msa0795870 | Msa1251930 | 0.839707 | 1.348806e-57 | -8.615850e-47 |
| Msa0833650 | Msa1251930 | 0.838598 | 2.615279e-57 | -8.615850e-47 |
| Msa0136650 | Msa1251930 | 0.800725 | 1.259490e-48 | -8.615850e-47 |
| Msa0164330 | Msa1251930 | 0.801794 | 7.610488e-49 | -8.615850e-47 |
| Msa0174450 | Msa1251930 | 0.812513 | 4.082631e-51 | -8.615850e-47 |
| Msa0192540 | Msa1251930 | 0.809165 | 2.165273e-50 | -8.615850e-47 |
| Msa0223210 | Msa1251930 | 0.801339 | 9.433902e-49 | -8.615850e-47 |
| Msa0225460 | Msa1251930 | 0.809418 | 1.911331e-50 | -8.615850e-47 |
| Msa0225680 | Msa1251930 | 0.815168 | 1.061379e-51 | -8.615850e-47 |
| Msa0225860 | Msa1251930 | 0.861669 | 8.723305e-64 | -8.615850e-47 |
| Msa1236410 | Msa1251930 | 0.804215 | 2.403674e-49 | -8.615850e-47 |
| Msa1251930 | Msa1257300 | 0.812788 | 3.553853e-51 | -8.615850e-47 |
| Msa1251930 | Msa1267770 | 0.806434 | 8.240602e-50 | -8.615850e-47 |
| Msa1251930 | Msa1277150 | 0.802515 | 5.409296e-49 | -8.615850e-47 |
| Msa1251930 | Msa1297230 | 0.813941 | 1.983078e-51 | -8.615850e-47 |
| Msa1251930 | Msa1298370 | 0.805134 | 1.545410e-49 | -8.615850e-47 |
| Msa1251930 | Msa1307210 | 0.811027 | 8.597226e-51 | -8.615850e-47 |
| Msa1251930 | Msa1320670 | 0.834577 | 2.766047e-56 | -8.615850e-47 |
| Msa1251930 | Msa1330420 | 0.821179 | 4.634152e-53 | -8.615850e-47 |
| Msa1251930 | Msa1343430 | 0.800202 | 1.609682e-48 | -8.615850e-47 |
| Msa1251930 | Msa1348090 | 0.804879 | 1.747362e-49 | -8.615850e-47 |
| Msa1251930 | Msa1376770 | 0.801907 | 7.213088e-49 | -8.615850e-47 |
| Msa1251930 | Msa1392580 | 0.819060 | 1.416025e-52 | -8.615850e-47 |
| Msa1251930 | Msa1397400 | 0.847016 | 1.509677e-59 | -8.615850e-47 |
| Msa1251930 | Msa1408620 | -0.801185 | 1.014357e-48 | -8.615850e-47 |
| Msa1251930 | Msa1420950 | 0.821251 | 4.459152e-53 | -8.615850e-47 |
| Msa1251930 | Msa1422420 | 0.803458 | 3.453409e-49 | -8.615850e-47 |
| Msa1251930 | Msa1427200 | 0.818278 | 2.130755e-52 | -8.615850e-47 |
| Msa1251930 | Msa1440960 | 0.821356 | 4.217055e-53 | -8.615850e-47 |
| Msa1251930 | Msa1465440 | 0.817953 | 2.523681e-52 | -8.615850e-47 |
| Msa0371030 | Msa1251930 | 0.803960 | 2.716239e-49 | -8.615850e-47 |
| Msa0378720 | Msa1251930 | 0.827281 | 1.706196e-54 | -8.615850e-47 |
| Msa0380620 | Msa1251930 | 0.807312 | 5.375766e-50 | -8.615850e-47 |
| Msa0392510 | Msa1251930 | 0.800487 | 1.408660e-48 | -8.615850e-47 |
| Msa0428370 | Msa1251930 | 0.812099 | 5.026676e-51 | -8.615850e-47 |
| Msa0430260 | Msa1251930 | 0.809714 | 1.650994e-50 | -8.615850e-47 |
| Msa0467490 | Msa1251930 | 0.813931 | 1.993859e-51 | -8.615850e-47 |
| Msa0474730 | Msa1251930 | 0.815814 | 7.623736e-52 | -8.615850e-47 |
| Msa1019430 | Msa1251930 | 0.810859 | 9.345876e-51 | -8.615850e-47 |
| Msa1019470 | Msa1251930 | 0.800904 | 1.157923e-48 | -8.615850e-47 |
| Msa1020510 | Msa1251930 | 0.806132 | 9.542859e-50 | -8.615850e-47 |
| Msa1027990 | Msa1251930 | 0.823115 | 1.647675e-53 | -8.615850e-47 |
| Msa0260510 | Msa1251930 | 0.845323 | 4.363106e-59 | -8.615850e-47 |
| Msa0261340 | Msa1251930 | 0.810256 | 1.261547e-50 | -8.615850e-47 |
| Msa0272660 | Msa1251930 | 0.824525 | 7.700241e-54 | -8.615850e-47 |
| Msa0298470 | Msa1251930 | 0.825436 | 4.691852e-54 | -8.615850e-47 |
| Msa0300270 | Msa1251930 | 0.824568 | 7.520841e-54 | -8.615850e-47 |
| Msa0300320 | Msa1251930 | 0.830405 | 2.991761e-55 | -8.615850e-47 |
| Msa0337700 | Msa1251930 | 0.809809 | 1.575056e-50 | -8.615850e-47 |
| Msa0339650 | Msa1251930 | 0.807924 | 3.985828e-50 | -8.615850e-47 |
| Msa0340500 | Msa1251930 | 0.812221 | 4.728414e-51 | -8.615850e-47 |
| Msa1132840 | Msa1251930 | 0.834128 | 3.584659e-56 | -8.615850e-47 |
| Msa1186020 | Msa1251930 | 0.830024 | 3.706970e-55 | -8.615850e-47 |
| Msa1192570 | Msa1251930 | 0.801631 | 8.220560e-49 | -8.615850e-47 |
| Msa1198250 | Msa1251930 | 0.801094 | 1.058947e-48 | -8.615850e-47 |
| Msa1208950 | Msa1251930 | 0.827047 | 1.940469e-54 | -8.615850e-47 |
| Msa1209450 | Msa1251930 | 0.802286 | 6.029964e-49 | -8.615850e-47 |
| Msa0483100 | Msa1251930 | 0.825458 | 4.636626e-54 | -8.615850e-47 |
| Msa0504610 | Msa1251930 | 0.810914 | 9.095798e-51 | -8.615850e-47 |
| Msa0580370 | Msa1251930 | 0.830676 | 2.568530e-55 | -8.615850e-47 |
| Msa0594310 | Msa1251930 | 0.801433 | 9.025630e-49 | -8.615850e-47 |
| Msa0597790 | Msa1251930 | 0.805745 | 1.150842e-49 | -8.615850e-47 |
| Msa0861510 | Msa1251930 | 0.825384 | 4.828372e-54 | -8.615850e-47 |
| Msa0861530 | Msa1251930 | 0.813693 | 2.248933e-51 | -8.615850e-47 |
| Msa0861600 | Msa1251930 | 0.829470 | 5.056594e-55 | -8.615850e-47 |
| Msa0875290 | Msa1251930 | 0.803478 | 3.420786e-49 | -8.615850e-47 |
| Msa0876560 | Msa1251930 | 0.812484 | 4.142972e-51 | -8.615850e-47 |
| Msa0902510 | Msa1251930 | 0.800638 | 1.311786e-48 | -8.615850e-47 |
| Msa0948290 | Msa1251930 | 0.812361 | 4.406162e-51 | -8.615850e-47 |
| Msa0967380 | Msa1251930 | 0.821378 | 4.167466e-53 | -8.615850e-47 |
| Msa0967870 | Msa1251930 | 0.805814 | 1.113042e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251930 | MtrunA17_Chr8g0367551 | 92.438 | 767 | 57 | 1 | 1 | 767 | 1 | 766 | 0.0 | 1392 |
| Msa1251930 | MtrunA17_Chr2g0279621 | 33.042 | 687 | 383 | 9 | 5 | 668 | 6 | 638 | 8.44e-86 | 291 |
| Msa1251930 | MtrunA17_Chr5g0412231 | 53.814 | 236 | 93 | 2 | 206 | 441 | 95 | 314 | 2.11e-62 | 223 |
| Msa1251930 | MtrunA17_Chr5g0412231 | 52.083 | 96 | 42 | 4 | 672 | 766 | 625 | 717 | 3.91e-19 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251930 | AT4G38062.1 | 46.316 | 570 | 290 | 5 | 1 | 569 | 1 | 555 | 1.79e-128 | 409 |
| Msa1251930 | AT4G38062.1 | 42.523 | 214 | 79 | 2 | 481 | 666 | 634 | 831 | 5.92e-30 | 127 |
Find 109 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTCCACTGCTGCAATTT+TGG | 0.088813 | 8_2:-48513476 | None:intergenic |
| CTTTCTTGCTAGACTTAAAT+TGG | 0.189601 | 8_2:-48512895 | None:intergenic |
| ATCTCTTTCACTTAGCTCTT+TGG | 0.190560 | 8_2:-48512765 | None:intergenic |
| TGGAATTTGAATTGCAAATA+TGG | 0.213248 | 8_2:+48514034 | Msa1251930:CDS |
| CTGATCAAGCTTCTCAGATT+TGG | 0.219030 | 8_2:-48512423 | None:intergenic |
| CAGTTCTTTGTTGCATTCAT+TGG | 0.227093 | 8_2:-48513833 | None:intergenic |
| TTTGATTGACTTGTGCATTA+AGG | 0.263887 | 8_2:-48512385 | None:intergenic |
| GATGCATATGAGAAACTTAA+AGG | 0.275708 | 8_2:+48512872 | Msa1251930:CDS |
| CTTGCTCTAGCTTCTCCATT+TGG | 0.305534 | 8_2:-48513234 | None:intergenic |
| CTTGTCATTTACTTCCTCTA+AGG | 0.336068 | 8_2:-48512627 | None:intergenic |
| TGCTGGAATGAATTTGAAAA+AGG | 0.359780 | 8_2:+48514440 | Msa1251930:CDS |
| GCTTTGATCAGTGCTCAAAA+AGG | 0.360535 | 8_2:+48513709 | Msa1251930:CDS |
| CAATTCTTTGTTGGATCCAT+AGG | 0.398035 | 8_2:-48513782 | None:intergenic |
| CTTAGAAAGGGAAAATTTGT+TGG | 0.405002 | 8_2:+48514314 | Msa1251930:CDS |
| TTGATTGACTTGTGCATTAA+GGG | 0.409107 | 8_2:-48512384 | None:intergenic |
| AGATGGCATGTTTCAGAAGT+TGG | 0.412491 | 8_2:+48512784 | Msa1251930:CDS |
| CTAGTTCTTTACGCGTCAAA+TGG | 0.420426 | 8_2:-48514098 | None:intergenic |
| AGCAAGAAAATCAAGAGTTA+AGG | 0.426164 | 8_2:+48513251 | Msa1251930:CDS |
| AAGTTGAAGTTTCAGAATAT+AGG | 0.431024 | 8_2:+48513071 | Msa1251930:CDS |
| TGAGTGCTGCAATTCTTTGT+TGG | 0.432151 | 8_2:-48513791 | None:intergenic |
| AGACATTGCTATCAATGAAC+TGG | 0.433101 | 8_2:+48513984 | Msa1251930:CDS |
| AGGGTTGGTGTTGGCCTTAG+AGG | 0.442460 | 8_2:+48512613 | Msa1251930:CDS |
| CAACAAAACTGTCCTTAGAA+AGG | 0.448638 | 8_2:+48514301 | Msa1251930:CDS |
| AATTTGCGAAAGAAGTGAAA+TGG | 0.449523 | 8_2:+48514014 | Msa1251930:CDS |
| AGTGGGAAGATGAGAAAAGA+GGG | 0.452007 | 8_2:+48512594 | Msa1251930:CDS |
| AGCTAAACAGTAGTTGTTAG+AGG | 0.452145 | 8_2:+48514568 | Msa1251930:CDS |
| CAAGCAATCGAGCTGTGGTC+TGG | 0.453382 | 8_2:-48513131 | None:intergenic |
| TGATACAAGATCTCCATTCA+AGG | 0.467451 | 8_2:+48514545 | Msa1251930:CDS |
| TGGAGATCTTGTATCAGAAA+TGG | 0.469819 | 8_2:-48514538 | None:intergenic |
| TAAAGAATCAAAGTACCAAA+TGG | 0.479941 | 8_2:+48513219 | Msa1251930:CDS |
| ATGAGGAAGATTGAGTCCTA+TGG | 0.483043 | 8_2:+48513766 | Msa1251930:CDS |
| AACTGCAGAACGAACTTGAT+AGG | 0.483851 | 8_2:+48513851 | Msa1251930:CDS |
| TGAGACAAGGTTGTTGAATG+AGG | 0.490827 | 8_2:+48513537 | Msa1251930:CDS |
| TGTGATTGCAAAAGGCACTA+TGG | 0.490962 | 8_2:+48514251 | Msa1251930:CDS |
| AAATGCTGGAGGAATCGATT+AGG | 0.491654 | 8_2:+48513881 | Msa1251930:CDS |
| TTCAAGTTTCTCCCACTAGT+AGG | 0.492517 | 8_2:+48514499 | Msa1251930:CDS |
| CTACTGTTTAGCTCCTTGAA+TGG | 0.495939 | 8_2:-48514558 | None:intergenic |
| GAGAGTGTTGTGATTGCAAA+AGG | 0.497721 | 8_2:+48514243 | Msa1251930:CDS |
| TAAGGCTAGAGAGGCCGAAT+GGG | 0.500756 | 8_2:+48513396 | Msa1251930:CDS |
| TTCTATCCGAGAGTCCCATT+CGG | 0.501380 | 8_2:-48513410 | None:intergenic |
| TTTCTACATGAGCAAGAGCT+TGG | 0.502460 | 8_2:-48513030 | None:intergenic |
| CTACTCAACAAAGAGAAAGA+AGG | 0.503263 | 8_2:+48513643 | Msa1251930:CDS |
| AACAAAACTGTCCTTAGAAA+GGG | 0.503674 | 8_2:+48514302 | Msa1251930:CDS |
| CAAATCTGAGAAGCTTGATC+AGG | 0.505361 | 8_2:+48512424 | Msa1251930:CDS |
| CTACATGAGCAAGAGCTTGG+TGG | 0.508529 | 8_2:-48513027 | None:intergenic |
| TGATAGGTACAAGGAAATGC+TGG | 0.511528 | 8_2:+48513867 | Msa1251930:CDS |
| TACTCAACAAAGAGAAAGAA+GGG | 0.513543 | 8_2:+48513644 | Msa1251930:CDS |
| CTTCTTGCACAGATAGATGT+TGG | 0.522107 | 8_2:+48514129 | Msa1251930:CDS |
| AACTTTCTTTATCCTACTAG+TGG | 0.522244 | 8_2:-48514511 | None:intergenic |
| TCAGCGGATTCTCGAGGAGA+AGG | 0.529967 | 8_2:+48513906 | Msa1251930:CDS |
| CTTGCATATTCTCTTTCACA+TGG | 0.533808 | 8_2:-48514476 | None:intergenic |
| GGAAGAGCTTCAGATGGAGT+TGG | 0.539655 | 8_2:+48513492 | Msa1251930:CDS |
| AGCTTTGAGATGTTTGATGA+TGG | 0.539798 | 8_2:-48512528 | None:intergenic |
| AAGTGGGAAGATGAGAAAAG+AGG | 0.542516 | 8_2:+48512593 | Msa1251930:CDS |
| AGTTGGAAGATCAATTAAAG+TGG | 0.543068 | 8_2:+48512822 | Msa1251930:CDS |
| ATTTGTACGAAAATCTCAAA+GGG | 0.545278 | 8_2:+48512486 | Msa1251930:CDS |
| GATGTCACTCAGAGAACTAC+AGG | 0.547837 | 8_2:+48513273 | Msa1251930:CDS |
| ATGAGCAAGAGCTTGGTGGC+AGG | 0.548176 | 8_2:-48513023 | None:intergenic |
| CATCAAGCAAGAGAAAGATA+AGG | 0.552855 | 8_2:+48514158 | Msa1251930:CDS |
| AAGCCTGAAAAGTTGTCTAT+CGG | 0.554852 | 8_2:+48512697 | Msa1251930:CDS |
| GGCAGCGAATCAAGAACAGC+AGG | 0.557210 | 8_2:+48512649 | Msa1251930:CDS |
| CTCTCTAGCCTTAAGAGTCA+AGG | 0.557227 | 8_2:-48513386 | None:intergenic |
| AGAGAAAGATAAGGTTGTTG+AGG | 0.558490 | 8_2:+48514167 | Msa1251930:CDS |
| AGATCAATTAAAGTGGAAGA+AGG | 0.559173 | 8_2:+48512829 | Msa1251930:CDS |
| TTAAGTCTAGCAAGAAAGAG+TGG | 0.559822 | 8_2:+48512900 | Msa1251930:CDS |
| TGATCAGGAACTGCTTCAGA+AGG | 0.562339 | 8_2:+48512439 | Msa1251930:CDS |
| TCTCGGATAGAACAATTGAC+TGG | 0.567347 | 8_2:+48513421 | Msa1251930:CDS |
| CATGTTTCAGAAGTTGGAGG+AGG | 0.572744 | 8_2:+48512790 | Msa1251930:CDS |
| ATTCAACAACCTTGTCTCAA+CGG | 0.573160 | 8_2:-48513533 | None:intergenic |
| TTAAGGCTAGAGAGGCCGAA+TGG | 0.574406 | 8_2:+48513395 | Msa1251930:CDS |
| GAATACGTGTCAATCTGAGT+TGG | 0.574413 | 8_2:+48513450 | Msa1251930:CDS |
| GGAAGATGAGAAAAGAGGGT+TGG | 0.574895 | 8_2:+48512598 | Msa1251930:CDS |
| GAGAGGCCGAATGGGACTCT+CGG | 0.575986 | 8_2:+48513404 | Msa1251930:CDS |
| AGAGTGTGCCTTGACTCTTA+AGG | 0.577299 | 8_2:+48513378 | Msa1251930:CDS |
| GAAGCTCAAATTCAAGAAGC+AGG | 0.583273 | 8_2:+48513295 | Msa1251930:CDS |
| TGTTGAGGAGCTTCAGAAAG+CGG | 0.587311 | 8_2:+48514182 | Msa1251930:CDS |
| GGAAGCCAAAATTGCAGCAG+TGG | 0.588436 | 8_2:+48513471 | Msa1251930:CDS |
| TAGCAAGAAAGAGTGGGAGA+TGG | 0.589935 | 8_2:+48512907 | Msa1251930:CDS |
| GAATTTCTGAGGCTCAGCTA+AGG | 0.590752 | 8_2:+48513593 | Msa1251930:CDS |
| ACTTTCTTTATCCTACTAGT+GGG | 0.592483 | 8_2:-48514510 | None:intergenic |
| ATATTCGTTGAAAACAAAAG+AGG | 0.595642 | 8_2:+48513189 | Msa1251930:CDS |
| CTTGACTCTTAAGGCTAGAG+AGG | 0.595666 | 8_2:+48513387 | Msa1251930:CDS |
| TAAGTCTAGCAAGAAAGAGT+GGG | 0.595787 | 8_2:+48512901 | Msa1251930:CDS |
| TGAGAAAAGAGGGTTGGTGT+TGG | 0.596204 | 8_2:+48512604 | Msa1251930:CDS |
| GGCATCGTGGTACTCACTAC+CGG | 0.602469 | 8_2:-48513110 | None:intergenic |
| TCAGGAACTGCTTCAGAAGG+AGG | 0.607053 | 8_2:+48512442 | Msa1251930:CDS |
| GAGGGACATGTTGAGAAGCA+TGG | 0.610311 | 8_2:+48514395 | Msa1251930:CDS |
| TGGCATGTTTCAGAAGTTGG+AGG | 0.611430 | 8_2:+48512787 | Msa1251930:CDS |
| ATTCGATAACCGTTGAGACA+AGG | 0.618604 | 8_2:+48513524 | Msa1251930:CDS |
| AGGCTGCAGCTTGATAATGC+CGG | 0.618776 | 8_2:+48513091 | Msa1251930:CDS |
| GAACGAACTTGATAGGTACA+AGG | 0.621080 | 8_2:+48513858 | Msa1251930:CDS |
| AATTTGTACGAAAATCTCAA+AGG | 0.621772 | 8_2:+48512485 | Msa1251930:CDS |
| AGCTGAGATTGAGAAACTCA+AGG | 0.627102 | 8_2:+48512316 | Msa1251930:CDS |
| TAATGCAGACACTCAACTGA+GGG | 0.630553 | 8_2:+48514377 | Msa1251930:CDS |
| AGAAAGCAGCATGTTTGATG+AGG | 0.636864 | 8_2:+48513749 | Msa1251930:CDS |
| ACTATTCGCAGTCAAAGTTG+AGG | 0.640526 | 8_2:+48513323 | Msa1251930:CDS |
| AAAGAGCTAAGTGAAAGAGA+TGG | 0.642231 | 8_2:+48512767 | Msa1251930:CDS |
| AGCAGTGGAAGAGCTTCAGA+TGG | 0.644604 | 8_2:+48513486 | Msa1251930:CDS |
| CGAGCTGTGGTCTGGCATCG+TGG | 0.648344 | 8_2:-48513123 | None:intergenic |
| GAGTTCAAGCAATCGAGCTG+TGG | 0.649303 | 8_2:-48513136 | None:intergenic |
| GTTGAAGCAAGGAATTTCTG+AGG | 0.655966 | 8_2:+48513582 | Msa1251930:CDS |
| CTAATGCAGACACTCAACTG+AGG | 0.666435 | 8_2:+48514376 | Msa1251930:CDS |
| TAGGTGTCAGCGGATTCTCG+AGG | 0.672286 | 8_2:+48513900 | Msa1251930:CDS |
| AGGAATCGATTAGGTGTCAG+CGG | 0.673062 | 8_2:+48513890 | Msa1251930:CDS |
| CTTAGAGGAAGTAAATGACA+AGG | 0.673659 | 8_2:+48512628 | Msa1251930:CDS |
| ACTCAACAAAGAGAAAGAAG+GGG | 0.682960 | 8_2:+48513645 | Msa1251930:CDS |
| TAGGTACAAGGAAATGCTGG+AGG | 0.693462 | 8_2:+48513870 | Msa1251930:CDS |
| ATGCTGCTAGTGTTGAAGCA+AGG | 0.712272 | 8_2:+48513571 | Msa1251930:CDS |
| GGACATGTTGAGAAGCATGG+AGG | 0.719760 | 8_2:+48514398 | Msa1251930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTCTAAATTTTTAAGCT+TGG | - | chr8_2:48513350-48513369 | None:intergenic | 20.0% |
| !!! | ATCCATCTCATTTTTATAAT+GGG | - | chr8_2:48513623-48513642 | None:intergenic | 20.0% |
| !!! | TTGTTCTAAATTTTTAAGCT+TGG | - | chr8_2:48513350-48513369 | None:intergenic | 20.0% |
| !!! | ATCCATCTCATTTTTATAAT+GGG | - | chr8_2:48513623-48513642 | None:intergenic | 20.0% |
| ! | AATTTGTACGAAAATCTCAA+AGG | + | chr8_2:48512485-48512504 | Msa1251930:CDS | 25.0% |
| ! | ATTTGTACGAAAATCTCAAA+GGG | + | chr8_2:48512486-48512505 | Msa1251930:CDS | 25.0% |
| ! | TCGATGAAAAGATTAAAAAG+TGG | + | chr8_2:48512576-48512595 | Msa1251930:CDS | 25.0% |
| ! | CGATGAAAAGATTAAAAAGT+GGG | + | chr8_2:48512577-48512596 | Msa1251930:CDS | 25.0% |
| ! | AAGTTGAAGTTTCAGAATAT+AGG | + | chr8_2:48513071-48513090 | Msa1251930:CDS | 25.0% |
| ! | ATATTCGTTGAAAACAAAAG+AGG | + | chr8_2:48513189-48513208 | Msa1251930:CDS | 25.0% |
| !! | TAAAGAATCAAAGTACCAAA+TGG | + | chr8_2:48513219-48513238 | Msa1251930:CDS | 25.0% |
| ! | TTCCCATTATAAAAATGAGA+TGG | + | chr8_2:48513618-48513637 | Msa1251930:CDS | 25.0% |
| !!! | GATCCATCTCATTTTTATAA+TGG | - | chr8_2:48513624-48513643 | None:intergenic | 25.0% |
| ! | TGGAATTTGAATTGCAAATA+TGG | + | chr8_2:48514034-48514053 | Msa1251930:CDS | 25.0% |
| ! | AATTTGTACGAAAATCTCAA+AGG | + | chr8_2:48512485-48512504 | Msa1251930:CDS | 25.0% |
| ! | ATTTGTACGAAAATCTCAAA+GGG | + | chr8_2:48512486-48512505 | Msa1251930:CDS | 25.0% |
| ! | TCGATGAAAAGATTAAAAAG+TGG | + | chr8_2:48512576-48512595 | Msa1251930:CDS | 25.0% |
| ! | CGATGAAAAGATTAAAAAGT+GGG | + | chr8_2:48512577-48512596 | Msa1251930:CDS | 25.0% |
| ! | AAGTTGAAGTTTCAGAATAT+AGG | + | chr8_2:48513071-48513090 | Msa1251930:CDS | 25.0% |
| ! | ATATTCGTTGAAAACAAAAG+AGG | + | chr8_2:48513189-48513208 | Msa1251930:CDS | 25.0% |
| !! | TAAAGAATCAAAGTACCAAA+TGG | + | chr8_2:48513219-48513238 | Msa1251930:CDS | 25.0% |
| ! | TTCCCATTATAAAAATGAGA+TGG | + | chr8_2:48513618-48513637 | Msa1251930:CDS | 25.0% |
| !!! | GATCCATCTCATTTTTATAA+TGG | - | chr8_2:48513624-48513643 | None:intergenic | 25.0% |
| ! | TGGAATTTGAATTGCAAATA+TGG | + | chr8_2:48514034-48514053 | Msa1251930:CDS | 25.0% |
| !! | TTGATTGACTTGTGCATTAA+GGG | - | chr8_2:48512387-48512406 | None:intergenic | 30.0% |
| !! | TTTGATTGACTTGTGCATTA+AGG | - | chr8_2:48512388-48512407 | None:intergenic | 30.0% |
| AGTTGGAAGATCAATTAAAG+TGG | + | chr8_2:48512822-48512841 | Msa1251930:CDS | 30.0% | |
| AGATCAATTAAAGTGGAAGA+AGG | + | chr8_2:48512829-48512848 | Msa1251930:CDS | 30.0% | |
| GATGCATATGAGAAACTTAA+AGG | + | chr8_2:48512872-48512891 | Msa1251930:CDS | 30.0% | |
| CTTTCTTGCTAGACTTAAAT+TGG | - | chr8_2:48512898-48512917 | None:intergenic | 30.0% | |
| AGCAAGAAAATCAAGAGTTA+AGG | + | chr8_2:48513251-48513270 | Msa1251930:CDS | 30.0% | |
| TACTCAACAAAGAGAAAGAA+GGG | + | chr8_2:48513644-48513663 | Msa1251930:CDS | 30.0% | |
| AATTTGCGAAAGAAGTGAAA+TGG | + | chr8_2:48514014-48514033 | Msa1251930:CDS | 30.0% | |
| AACAAAACTGTCCTTAGAAA+GGG | + | chr8_2:48514302-48514321 | Msa1251930:CDS | 30.0% | |
| ! | CAACAAATTTTCCCTTTCTA+AGG | - | chr8_2:48514316-48514335 | None:intergenic | 30.0% |
| CTTAGAAAGGGAAAATTTGT+TGG | + | chr8_2:48514314-48514333 | Msa1251930:CDS | 30.0% | |
| !!! | AATTTGTTGGCTTTTGTTCA+AGG | + | chr8_2:48514327-48514346 | Msa1251930:CDS | 30.0% |
| !!! | ATTTGTTGGCTTTTGTTCAA+GGG | + | chr8_2:48514328-48514347 | Msa1251930:CDS | 30.0% |
| TGCTGGAATGAATTTGAAAA+AGG | + | chr8_2:48514440-48514459 | Msa1251930:CDS | 30.0% | |
| ACTTTCTTTATCCTACTAGT+GGG | - | chr8_2:48514513-48514532 | None:intergenic | 30.0% | |
| AACTTTCTTTATCCTACTAG+TGG | - | chr8_2:48514514-48514533 | None:intergenic | 30.0% | |
| !! | TTGATTGACTTGTGCATTAA+GGG | - | chr8_2:48512387-48512406 | None:intergenic | 30.0% |
| !! | TTTGATTGACTTGTGCATTA+AGG | - | chr8_2:48512388-48512407 | None:intergenic | 30.0% |
| AGTTGGAAGATCAATTAAAG+TGG | + | chr8_2:48512822-48512841 | Msa1251930:CDS | 30.0% | |
| AGATCAATTAAAGTGGAAGA+AGG | + | chr8_2:48512829-48512848 | Msa1251930:CDS | 30.0% | |
| GATGCATATGAGAAACTTAA+AGG | + | chr8_2:48512872-48512891 | Msa1251930:CDS | 30.0% | |
| CTTTCTTGCTAGACTTAAAT+TGG | - | chr8_2:48512898-48512917 | None:intergenic | 30.0% | |
| AGCAAGAAAATCAAGAGTTA+AGG | + | chr8_2:48513251-48513270 | Msa1251930:CDS | 30.0% | |
| TACTCAACAAAGAGAAAGAA+GGG | + | chr8_2:48513644-48513663 | Msa1251930:CDS | 30.0% | |
| AATTTGCGAAAGAAGTGAAA+TGG | + | chr8_2:48514014-48514033 | Msa1251930:CDS | 30.0% | |
| AACAAAACTGTCCTTAGAAA+GGG | + | chr8_2:48514302-48514321 | Msa1251930:CDS | 30.0% | |
| ! | CAACAAATTTTCCCTTTCTA+AGG | - | chr8_2:48514316-48514335 | None:intergenic | 30.0% |
| CTTAGAAAGGGAAAATTTGT+TGG | + | chr8_2:48514314-48514333 | Msa1251930:CDS | 30.0% | |
| !!! | AATTTGTTGGCTTTTGTTCA+AGG | + | chr8_2:48514327-48514346 | Msa1251930:CDS | 30.0% |
| !!! | ATTTGTTGGCTTTTGTTCAA+GGG | + | chr8_2:48514328-48514347 | Msa1251930:CDS | 30.0% |
| TGCTGGAATGAATTTGAAAA+AGG | + | chr8_2:48514440-48514459 | Msa1251930:CDS | 30.0% | |
| ACTTTCTTTATCCTACTAGT+GGG | - | chr8_2:48514513-48514532 | None:intergenic | 30.0% | |
| AACTTTCTTTATCCTACTAG+TGG | - | chr8_2:48514514-48514533 | None:intergenic | 30.0% | |
| GGAAAAAGTTTATGAAGAGC+TGG | + | chr8_2:48512283-48512302 | Msa1251930:CDS | 35.0% | |
| !! | AGCTTTGAGATGTTTGATGA+TGG | - | chr8_2:48512531-48512550 | None:intergenic | 35.0% |
| ! | CTTGTCATTTACTTCCTCTA+AGG | - | chr8_2:48512630-48512649 | None:intergenic | 35.0% |
| CTTAGAGGAAGTAAATGACA+AGG | + | chr8_2:48512628-48512647 | Msa1251930:CDS | 35.0% | |
| AAGCCTGAAAAGTTGTCTAT+CGG | + | chr8_2:48512697-48512716 | Msa1251930:CDS | 35.0% | |
| ! | AAACCGATAGACAACTTTTC+AGG | - | chr8_2:48512703-48512722 | None:intergenic | 35.0% |
| ! | ATCTCTTTCACTTAGCTCTT+TGG | - | chr8_2:48512768-48512787 | None:intergenic | 35.0% |
| AAAGAGCTAAGTGAAAGAGA+TGG | + | chr8_2:48512767-48512786 | Msa1251930:CDS | 35.0% | |
| TTAAGTCTAGCAAGAAAGAG+TGG | + | chr8_2:48512900-48512919 | Msa1251930:CDS | 35.0% | |
| TAAGTCTAGCAAGAAAGAGT+GGG | + | chr8_2:48512901-48512920 | Msa1251930:CDS | 35.0% | |
| ATTCAACAACCTTGTCTCAA+CGG | - | chr8_2:48513536-48513555 | None:intergenic | 35.0% | |
| CTACTCAACAAAGAGAAAGA+AGG | + | chr8_2:48513643-48513662 | Msa1251930:CDS | 35.0% | |
| ACTCAACAAAGAGAAAGAAG+GGG | + | chr8_2:48513645-48513664 | Msa1251930:CDS | 35.0% | |
| ! | TTTTCAACTGATGAAGCAGT+TGG | + | chr8_2:48513672-48513691 | Msa1251930:CDS | 35.0% |
| CAATTCTTTGTTGGATCCAT+AGG | - | chr8_2:48513785-48513804 | None:intergenic | 35.0% | |
| CAGTTCTTTGTTGCATTCAT+TGG | - | chr8_2:48513836-48513855 | None:intergenic | 35.0% | |
| AGACATTGCTATCAATGAAC+TGG | + | chr8_2:48513984-48514003 | Msa1251930:CDS | 35.0% | |
| CATCAAGCAAGAGAAAGATA+AGG | + | chr8_2:48514158-48514177 | Msa1251930:CDS | 35.0% | |
| AGAGAAAGATAAGGTTGTTG+AGG | + | chr8_2:48514167-48514186 | Msa1251930:CDS | 35.0% | |
| CAACAAAACTGTCCTTAGAA+AGG | + | chr8_2:48514301-48514320 | Msa1251930:CDS | 35.0% | |
| !!! | GAGGAATCTTTTGAGATTGA+TGG | + | chr8_2:48514417-48514436 | Msa1251930:CDS | 35.0% |
| CTTGCATATTCTCTTTCACA+TGG | - | chr8_2:48514479-48514498 | None:intergenic | 35.0% | |
| TGGAGATCTTGTATCAGAAA+TGG | - | chr8_2:48514541-48514560 | None:intergenic | 35.0% | |
| TGATACAAGATCTCCATTCA+AGG | + | chr8_2:48514545-48514564 | Msa1251930:CDS | 35.0% | |
| GGAAAAAGTTTATGAAGAGC+TGG | + | chr8_2:48512283-48512302 | Msa1251930:CDS | 35.0% | |
| !! | AGCTTTGAGATGTTTGATGA+TGG | - | chr8_2:48512531-48512550 | None:intergenic | 35.0% |
| ! | CTTGTCATTTACTTCCTCTA+AGG | - | chr8_2:48512630-48512649 | None:intergenic | 35.0% |
| CTTAGAGGAAGTAAATGACA+AGG | + | chr8_2:48512628-48512647 | Msa1251930:CDS | 35.0% | |
| AAGCCTGAAAAGTTGTCTAT+CGG | + | chr8_2:48512697-48512716 | Msa1251930:CDS | 35.0% | |
| ! | AAACCGATAGACAACTTTTC+AGG | - | chr8_2:48512703-48512722 | None:intergenic | 35.0% |
| ! | ATCTCTTTCACTTAGCTCTT+TGG | - | chr8_2:48512768-48512787 | None:intergenic | 35.0% |
| AAAGAGCTAAGTGAAAGAGA+TGG | + | chr8_2:48512767-48512786 | Msa1251930:CDS | 35.0% | |
| TTAAGTCTAGCAAGAAAGAG+TGG | + | chr8_2:48512900-48512919 | Msa1251930:CDS | 35.0% | |
| TAAGTCTAGCAAGAAAGAGT+GGG | + | chr8_2:48512901-48512920 | Msa1251930:CDS | 35.0% | |
| ATTCAACAACCTTGTCTCAA+CGG | - | chr8_2:48513536-48513555 | None:intergenic | 35.0% | |
| CTACTCAACAAAGAGAAAGA+AGG | + | chr8_2:48513643-48513662 | Msa1251930:CDS | 35.0% | |
| ACTCAACAAAGAGAAAGAAG+GGG | + | chr8_2:48513645-48513664 | Msa1251930:CDS | 35.0% | |
| ! | TTTTCAACTGATGAAGCAGT+TGG | + | chr8_2:48513672-48513691 | Msa1251930:CDS | 35.0% |
| CAATTCTTTGTTGGATCCAT+AGG | - | chr8_2:48513785-48513804 | None:intergenic | 35.0% | |
| CAGTTCTTTGTTGCATTCAT+TGG | - | chr8_2:48513836-48513855 | None:intergenic | 35.0% | |
| AGACATTGCTATCAATGAAC+TGG | + | chr8_2:48513984-48514003 | Msa1251930:CDS | 35.0% | |
| CATCAAGCAAGAGAAAGATA+AGG | + | chr8_2:48514158-48514177 | Msa1251930:CDS | 35.0% | |
| AGAGAAAGATAAGGTTGTTG+AGG | + | chr8_2:48514167-48514186 | Msa1251930:CDS | 35.0% | |
| CAACAAAACTGTCCTTAGAA+AGG | + | chr8_2:48514301-48514320 | Msa1251930:CDS | 35.0% | |
| !!! | GAGGAATCTTTTGAGATTGA+TGG | + | chr8_2:48514417-48514436 | Msa1251930:CDS | 35.0% |
| CTTGCATATTCTCTTTCACA+TGG | - | chr8_2:48514479-48514498 | None:intergenic | 35.0% | |
| TGGAGATCTTGTATCAGAAA+TGG | - | chr8_2:48514541-48514560 | None:intergenic | 35.0% | |
| TGATACAAGATCTCCATTCA+AGG | + | chr8_2:48514545-48514564 | Msa1251930:CDS | 35.0% | |
| AGCTGAGATTGAGAAACTCA+AGG | + | chr8_2:48512316-48512335 | Msa1251930:CDS | 40.0% | |
| CTGATCAAGCTTCTCAGATT+TGG | - | chr8_2:48512426-48512445 | None:intergenic | 40.0% | |
| CAAATCTGAGAAGCTTGATC+AGG | + | chr8_2:48512424-48512443 | Msa1251930:CDS | 40.0% | |
| AAGTGGGAAGATGAGAAAAG+AGG | + | chr8_2:48512593-48512612 | Msa1251930:CDS | 40.0% | |
| AGTGGGAAGATGAGAAAAGA+GGG | + | chr8_2:48512594-48512613 | Msa1251930:CDS | 40.0% | |
| AGATGGCATGTTTCAGAAGT+TGG | + | chr8_2:48512784-48512803 | Msa1251930:CDS | 40.0% | |
| TTTCTACATGAGCAAGAGCT+TGG | - | chr8_2:48513033-48513052 | None:intergenic | 40.0% | |
| GAAGCTCAAATTCAAGAAGC+AGG | + | chr8_2:48513295-48513314 | Msa1251930:CDS | 40.0% | |
| ACTATTCGCAGTCAAAGTTG+AGG | + | chr8_2:48513323-48513342 | Msa1251930:CDS | 40.0% | |
| TCTCGGATAGAACAATTGAC+TGG | + | chr8_2:48513421-48513440 | Msa1251930:CDS | 40.0% | |
| GAATACGTGTCAATCTGAGT+TGG | + | chr8_2:48513450-48513469 | Msa1251930:CDS | 40.0% | |
| ATTCGATAACCGTTGAGACA+AGG | + | chr8_2:48513524-48513543 | Msa1251930:CDS | 40.0% | |
| TGAGACAAGGTTGTTGAATG+AGG | + | chr8_2:48513537-48513556 | Msa1251930:CDS | 40.0% | |
| GTTGAAGCAAGGAATTTCTG+AGG | + | chr8_2:48513582-48513601 | Msa1251930:CDS | 40.0% | |
| GCTTTGATCAGTGCTCAAAA+AGG | + | chr8_2:48513709-48513728 | Msa1251930:CDS | 40.0% | |
| AGAAAGCAGCATGTTTGATG+AGG | + | chr8_2:48513749-48513768 | Msa1251930:CDS | 40.0% | |
| ATGAGGAAGATTGAGTCCTA+TGG | + | chr8_2:48513766-48513785 | Msa1251930:CDS | 40.0% | |
| ! | TGAGTGCTGCAATTCTTTGT+TGG | - | chr8_2:48513794-48513813 | None:intergenic | 40.0% |
| AACTGCAGAACGAACTTGAT+AGG | + | chr8_2:48513851-48513870 | Msa1251930:CDS | 40.0% | |
| GAACGAACTTGATAGGTACA+AGG | + | chr8_2:48513858-48513877 | Msa1251930:CDS | 40.0% | |
| TGATAGGTACAAGGAAATGC+TGG | + | chr8_2:48513867-48513886 | Msa1251930:CDS | 40.0% | |
| AAATGCTGGAGGAATCGATT+AGG | + | chr8_2:48513881-48513900 | Msa1251930:CDS | 40.0% | |
| ! | CTAGTTCTTTACGCGTCAAA+TGG | - | chr8_2:48514101-48514120 | None:intergenic | 40.0% |
| CTTCTTGCACAGATAGATGT+TGG | + | chr8_2:48514129-48514148 | Msa1251930:CDS | 40.0% | |
| !! | TCAGAAAGCGGTTGTTTTGT+TGG | + | chr8_2:48514194-48514213 | Msa1251930:CDS | 40.0% |
| !! | GAGAGTGTTGTGATTGCAAA+AGG | + | chr8_2:48514243-48514262 | Msa1251930:CDS | 40.0% |
| !! | TGTGATTGCAAAAGGCACTA+TGG | + | chr8_2:48514251-48514270 | Msa1251930:CDS | 40.0% |
| TAATGCAGACACTCAACTGA+GGG | + | chr8_2:48514377-48514396 | Msa1251930:CDS | 40.0% | |
| !!! | TCTTTTGAGATTGATGGTGC+TGG | + | chr8_2:48514423-48514442 | Msa1251930:CDS | 40.0% |
| ! | TTCAAGTTTCTCCCACTAGT+AGG | + | chr8_2:48514499-48514518 | Msa1251930:CDS | 40.0% |
| ! | CTACTGTTTAGCTCCTTGAA+TGG | - | chr8_2:48514561-48514580 | None:intergenic | 40.0% |
| AGCTGAGATTGAGAAACTCA+AGG | + | chr8_2:48512316-48512335 | Msa1251930:CDS | 40.0% | |
| CTGATCAAGCTTCTCAGATT+TGG | - | chr8_2:48512426-48512445 | None:intergenic | 40.0% | |
| CAAATCTGAGAAGCTTGATC+AGG | + | chr8_2:48512424-48512443 | Msa1251930:CDS | 40.0% | |
| AAGTGGGAAGATGAGAAAAG+AGG | + | chr8_2:48512593-48512612 | Msa1251930:CDS | 40.0% | |
| AGTGGGAAGATGAGAAAAGA+GGG | + | chr8_2:48512594-48512613 | Msa1251930:CDS | 40.0% | |
| AGATGGCATGTTTCAGAAGT+TGG | + | chr8_2:48512784-48512803 | Msa1251930:CDS | 40.0% | |
| TTTCTACATGAGCAAGAGCT+TGG | - | chr8_2:48513033-48513052 | None:intergenic | 40.0% | |
| GAAGCTCAAATTCAAGAAGC+AGG | + | chr8_2:48513295-48513314 | Msa1251930:CDS | 40.0% | |
| ACTATTCGCAGTCAAAGTTG+AGG | + | chr8_2:48513323-48513342 | Msa1251930:CDS | 40.0% | |
| TCTCGGATAGAACAATTGAC+TGG | + | chr8_2:48513421-48513440 | Msa1251930:CDS | 40.0% | |
| GAATACGTGTCAATCTGAGT+TGG | + | chr8_2:48513450-48513469 | Msa1251930:CDS | 40.0% | |
| ATTCGATAACCGTTGAGACA+AGG | + | chr8_2:48513524-48513543 | Msa1251930:CDS | 40.0% | |
| TGAGACAAGGTTGTTGAATG+AGG | + | chr8_2:48513537-48513556 | Msa1251930:CDS | 40.0% | |
| GTTGAAGCAAGGAATTTCTG+AGG | + | chr8_2:48513582-48513601 | Msa1251930:CDS | 40.0% | |
| GCTTTGATCAGTGCTCAAAA+AGG | + | chr8_2:48513709-48513728 | Msa1251930:CDS | 40.0% | |
| AGAAAGCAGCATGTTTGATG+AGG | + | chr8_2:48513749-48513768 | Msa1251930:CDS | 40.0% | |
| ATGAGGAAGATTGAGTCCTA+TGG | + | chr8_2:48513766-48513785 | Msa1251930:CDS | 40.0% | |
| ! | TGAGTGCTGCAATTCTTTGT+TGG | - | chr8_2:48513794-48513813 | None:intergenic | 40.0% |
| AACTGCAGAACGAACTTGAT+AGG | + | chr8_2:48513851-48513870 | Msa1251930:CDS | 40.0% | |
| GAACGAACTTGATAGGTACA+AGG | + | chr8_2:48513858-48513877 | Msa1251930:CDS | 40.0% | |
| TGATAGGTACAAGGAAATGC+TGG | + | chr8_2:48513867-48513886 | Msa1251930:CDS | 40.0% | |
| AAATGCTGGAGGAATCGATT+AGG | + | chr8_2:48513881-48513900 | Msa1251930:CDS | 40.0% | |
| ! | CTAGTTCTTTACGCGTCAAA+TGG | - | chr8_2:48514101-48514120 | None:intergenic | 40.0% |
| CTTCTTGCACAGATAGATGT+TGG | + | chr8_2:48514129-48514148 | Msa1251930:CDS | 40.0% | |
| !! | TCAGAAAGCGGTTGTTTTGT+TGG | + | chr8_2:48514194-48514213 | Msa1251930:CDS | 40.0% |
| !! | GAGAGTGTTGTGATTGCAAA+AGG | + | chr8_2:48514243-48514262 | Msa1251930:CDS | 40.0% |
| !! | TGTGATTGCAAAAGGCACTA+TGG | + | chr8_2:48514251-48514270 | Msa1251930:CDS | 40.0% |
| TAATGCAGACACTCAACTGA+GGG | + | chr8_2:48514377-48514396 | Msa1251930:CDS | 40.0% | |
| !!! | TCTTTTGAGATTGATGGTGC+TGG | + | chr8_2:48514423-48514442 | Msa1251930:CDS | 40.0% |
| ! | TTCAAGTTTCTCCCACTAGT+AGG | + | chr8_2:48514499-48514518 | Msa1251930:CDS | 40.0% |
| ! | CTACTGTTTAGCTCCTTGAA+TGG | - | chr8_2:48514561-48514580 | None:intergenic | 40.0% |
| TGATCAGGAACTGCTTCAGA+AGG | + | chr8_2:48512439-48512458 | Msa1251930:CDS | 45.0% | |
| GGAAGATGAGAAAAGAGGGT+TGG | + | chr8_2:48512598-48512617 | Msa1251930:CDS | 45.0% | |
| !! | TGAGAAAAGAGGGTTGGTGT+TGG | + | chr8_2:48512604-48512623 | Msa1251930:CDS | 45.0% |
| TGGCATGTTTCAGAAGTTGG+AGG | + | chr8_2:48512787-48512806 | Msa1251930:CDS | 45.0% | |
| CATGTTTCAGAAGTTGGAGG+AGG | + | chr8_2:48512790-48512809 | Msa1251930:CDS | 45.0% | |
| GGAGGAGGAAAAAGTGAAGT+TGG | + | chr8_2:48512805-48512824 | Msa1251930:CDS | 45.0% | |
| TAGCAAGAAAGAGTGGGAGA+TGG | + | chr8_2:48512907-48512926 | Msa1251930:CDS | 45.0% | |
| ! | CTTGCTCTAGCTTCTCCATT+TGG | - | chr8_2:48513237-48513256 | None:intergenic | 45.0% |
| GATGTCACTCAGAGAACTAC+AGG | + | chr8_2:48513273-48513292 | Msa1251930:CDS | 45.0% | |
| AGAGTGTGCCTTGACTCTTA+AGG | + | chr8_2:48513378-48513397 | Msa1251930:CDS | 45.0% | |
| !! | CTCTCTAGCCTTAAGAGTCA+AGG | - | chr8_2:48513389-48513408 | None:intergenic | 45.0% |
| CTTGACTCTTAAGGCTAGAG+AGG | + | chr8_2:48513387-48513406 | Msa1251930:CDS | 45.0% | |
| TTCTATCCGAGAGTCCCATT+CGG | - | chr8_2:48513413-48513432 | None:intergenic | 45.0% | |
| ! | CTCTTCCACTGCTGCAATTT+TGG | - | chr8_2:48513479-48513498 | None:intergenic | 45.0% |
| ! | ATGCTGCTAGTGTTGAAGCA+AGG | + | chr8_2:48513571-48513590 | Msa1251930:CDS | 45.0% |
| !! | GAATTTCTGAGGCTCAGCTA+AGG | + | chr8_2:48513593-48513612 | Msa1251930:CDS | 45.0% |
| TAGGTACAAGGAAATGCTGG+AGG | + | chr8_2:48513870-48513889 | Msa1251930:CDS | 45.0% | |
| AGGAATCGATTAGGTGTCAG+CGG | + | chr8_2:48513890-48513909 | Msa1251930:CDS | 45.0% | |
| TGTTGAGGAGCTTCAGAAAG+CGG | + | chr8_2:48514182-48514201 | Msa1251930:CDS | 45.0% | |
| CTAATGCAGACACTCAACTG+AGG | + | chr8_2:48514376-48514395 | Msa1251930:CDS | 45.0% | |
| TGATCAGGAACTGCTTCAGA+AGG | + | chr8_2:48512439-48512458 | Msa1251930:CDS | 45.0% | |
| GGAAGATGAGAAAAGAGGGT+TGG | + | chr8_2:48512598-48512617 | Msa1251930:CDS | 45.0% | |
| !! | TGAGAAAAGAGGGTTGGTGT+TGG | + | chr8_2:48512604-48512623 | Msa1251930:CDS | 45.0% |
| TGGCATGTTTCAGAAGTTGG+AGG | + | chr8_2:48512787-48512806 | Msa1251930:CDS | 45.0% | |
| CATGTTTCAGAAGTTGGAGG+AGG | + | chr8_2:48512790-48512809 | Msa1251930:CDS | 45.0% | |
| GGAGGAGGAAAAAGTGAAGT+TGG | + | chr8_2:48512805-48512824 | Msa1251930:CDS | 45.0% | |
| TAGCAAGAAAGAGTGGGAGA+TGG | + | chr8_2:48512907-48512926 | Msa1251930:CDS | 45.0% | |
| ! | CTTGCTCTAGCTTCTCCATT+TGG | - | chr8_2:48513237-48513256 | None:intergenic | 45.0% |
| GATGTCACTCAGAGAACTAC+AGG | + | chr8_2:48513273-48513292 | Msa1251930:CDS | 45.0% | |
| AGAGTGTGCCTTGACTCTTA+AGG | + | chr8_2:48513378-48513397 | Msa1251930:CDS | 45.0% | |
| !! | CTCTCTAGCCTTAAGAGTCA+AGG | - | chr8_2:48513389-48513408 | None:intergenic | 45.0% |
| CTTGACTCTTAAGGCTAGAG+AGG | + | chr8_2:48513387-48513406 | Msa1251930:CDS | 45.0% | |
| TTCTATCCGAGAGTCCCATT+CGG | - | chr8_2:48513413-48513432 | None:intergenic | 45.0% | |
| ! | CTCTTCCACTGCTGCAATTT+TGG | - | chr8_2:48513479-48513498 | None:intergenic | 45.0% |
| ! | ATGCTGCTAGTGTTGAAGCA+AGG | + | chr8_2:48513571-48513590 | Msa1251930:CDS | 45.0% |
| !! | GAATTTCTGAGGCTCAGCTA+AGG | + | chr8_2:48513593-48513612 | Msa1251930:CDS | 45.0% |
| TAGGTACAAGGAAATGCTGG+AGG | + | chr8_2:48513870-48513889 | Msa1251930:CDS | 45.0% | |
| AGGAATCGATTAGGTGTCAG+CGG | + | chr8_2:48513890-48513909 | Msa1251930:CDS | 45.0% | |
| TGTTGAGGAGCTTCAGAAAG+CGG | + | chr8_2:48514182-48514201 | Msa1251930:CDS | 45.0% | |
| CTAATGCAGACACTCAACTG+AGG | + | chr8_2:48514376-48514395 | Msa1251930:CDS | 45.0% | |
| TCAGGAACTGCTTCAGAAGG+AGG | + | chr8_2:48512442-48512461 | Msa1251930:CDS | 50.0% | |
| CTACATGAGCAAGAGCTTGG+TGG | - | chr8_2:48513030-48513049 | None:intergenic | 50.0% | |
| !! | AGGCTGCAGCTTGATAATGC+CGG | + | chr8_2:48513091-48513110 | Msa1251930:CDS | 50.0% |
| GAGTTCAAGCAATCGAGCTG+TGG | - | chr8_2:48513139-48513158 | None:intergenic | 50.0% | |
| TTAAGGCTAGAGAGGCCGAA+TGG | + | chr8_2:48513395-48513414 | Msa1251930:CDS | 50.0% | |
| TAAGGCTAGAGAGGCCGAAT+GGG | + | chr8_2:48513396-48513415 | Msa1251930:CDS | 50.0% | |
| GGAAGCCAAAATTGCAGCAG+TGG | + | chr8_2:48513471-48513490 | Msa1251930:CDS | 50.0% | |
| AGCAGTGGAAGAGCTTCAGA+TGG | + | chr8_2:48513486-48513505 | Msa1251930:CDS | 50.0% | |
| GGAAGAGCTTCAGATGGAGT+TGG | + | chr8_2:48513492-48513511 | Msa1251930:CDS | 50.0% | |
| GAGGGACATGTTGAGAAGCA+TGG | + | chr8_2:48514395-48514414 | Msa1251930:CDS | 50.0% | |
| ! | GGACATGTTGAGAAGCATGG+AGG | + | chr8_2:48514398-48514417 | Msa1251930:CDS | 50.0% |
| TCAGGAACTGCTTCAGAAGG+AGG | + | chr8_2:48512442-48512461 | Msa1251930:CDS | 50.0% | |
| CTACATGAGCAAGAGCTTGG+TGG | - | chr8_2:48513030-48513049 | None:intergenic | 50.0% | |
| !! | AGGCTGCAGCTTGATAATGC+CGG | + | chr8_2:48513091-48513110 | Msa1251930:CDS | 50.0% |
| GAGTTCAAGCAATCGAGCTG+TGG | - | chr8_2:48513139-48513158 | None:intergenic | 50.0% | |
| TTAAGGCTAGAGAGGCCGAA+TGG | + | chr8_2:48513395-48513414 | Msa1251930:CDS | 50.0% | |
| TAAGGCTAGAGAGGCCGAAT+GGG | + | chr8_2:48513396-48513415 | Msa1251930:CDS | 50.0% | |
| GGAAGCCAAAATTGCAGCAG+TGG | + | chr8_2:48513471-48513490 | Msa1251930:CDS | 50.0% | |
| AGCAGTGGAAGAGCTTCAGA+TGG | + | chr8_2:48513486-48513505 | Msa1251930:CDS | 50.0% | |
| GGAAGAGCTTCAGATGGAGT+TGG | + | chr8_2:48513492-48513511 | Msa1251930:CDS | 50.0% | |
| GAGGGACATGTTGAGAAGCA+TGG | + | chr8_2:48514395-48514414 | Msa1251930:CDS | 50.0% | |
| ! | GGACATGTTGAGAAGCATGG+AGG | + | chr8_2:48514398-48514417 | Msa1251930:CDS | 50.0% |
| !! | AGGGTTGGTGTTGGCCTTAG+AGG | + | chr8_2:48512613-48512632 | Msa1251930:CDS | 55.0% |
| GGCAGCGAATCAAGAACAGC+AGG | + | chr8_2:48512649-48512668 | Msa1251930:CDS | 55.0% | |
| ! | ATGAGCAAGAGCTTGGTGGC+AGG | - | chr8_2:48513026-48513045 | None:intergenic | 55.0% |
| GGCATCGTGGTACTCACTAC+CGG | - | chr8_2:48513113-48513132 | None:intergenic | 55.0% | |
| CAAGCAATCGAGCTGTGGTC+TGG | - | chr8_2:48513134-48513153 | None:intergenic | 55.0% | |
| ! | TAGGTGTCAGCGGATTCTCG+AGG | + | chr8_2:48513900-48513919 | Msa1251930:CDS | 55.0% |
| ! | TCAGCGGATTCTCGAGGAGA+AGG | + | chr8_2:48513906-48513925 | Msa1251930:CDS | 55.0% |
| !! | AGGGTTGGTGTTGGCCTTAG+AGG | + | chr8_2:48512613-48512632 | Msa1251930:CDS | 55.0% |
| GGCAGCGAATCAAGAACAGC+AGG | + | chr8_2:48512649-48512668 | Msa1251930:CDS | 55.0% | |
| ! | ATGAGCAAGAGCTTGGTGGC+AGG | - | chr8_2:48513026-48513045 | None:intergenic | 55.0% |
| GGCATCGTGGTACTCACTAC+CGG | - | chr8_2:48513113-48513132 | None:intergenic | 55.0% | |
| CAAGCAATCGAGCTGTGGTC+TGG | - | chr8_2:48513134-48513153 | None:intergenic | 55.0% | |
| ! | TAGGTGTCAGCGGATTCTCG+AGG | + | chr8_2:48513900-48513919 | Msa1251930:CDS | 55.0% |
| ! | TCAGCGGATTCTCGAGGAGA+AGG | + | chr8_2:48513906-48513925 | Msa1251930:CDS | 55.0% |
| GAGAGGCCGAATGGGACTCT+CGG | + | chr8_2:48513404-48513423 | Msa1251930:CDS | 60.0% | |
| GAGAGGCCGAATGGGACTCT+CGG | + | chr8_2:48513404-48513423 | Msa1251930:CDS | 60.0% | |
| CGAGCTGTGGTCTGGCATCG+TGG | - | chr8_2:48513126-48513145 | None:intergenic | 65.0% | |
| CGAGCTGTGGTCTGGCATCG+TGG | - | chr8_2:48513126-48513145 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 48512281 | 48514587 | 48512281 | ID=Msa1251930;Name=Msa1251930 |
| chr8_2 | mRNA | 48512281 | 48514587 | 48512281 | ID=Msa1251930-mRNA-1;Parent=Msa1251930;Name=Msa1251930-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|1|1|0|768 |
| chr8_2 | exon | 48512281 | 48514587 | 48512281 | ID=Msa1251930-mRNA-1:exon:14624;Parent=Msa1251930-mRNA-1 |
| chr8_2 | CDS | 48512281 | 48514587 | 48512281 | ID=Msa1251930-mRNA-1:cds;Parent=Msa1251930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
