Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205810 | sp|Q43077|AMO_PEA | 83.086 | 674 | 111 | 3 | 1 | 673 | 1 | 672 | 0.0 | 1186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205810 | A0A2Z6NA55 | 89.037 | 675 | 67 | 3 | 1 | 675 | 1 | 668 | 0.0 | 1246 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000800 | Msa1205810 | 0.802633 | 5.113283e-49 | -8.615850e-47 |
| Msa0011870 | Msa1205810 | 0.800771 | 1.232530e-48 | -8.615850e-47 |
| Msa0013270 | Msa1205810 | 0.805865 | 1.086099e-49 | -8.615850e-47 |
| Msa0037180 | Msa1205810 | 0.821948 | 3.076683e-53 | -8.615850e-47 |
| Msa0060690 | Msa1205810 | 0.825935 | 3.572738e-54 | -8.615850e-47 |
| Msa0073110 | Msa1205810 | 0.803719 | 3.048908e-49 | -8.615850e-47 |
| Msa0092220 | Msa1205810 | 0.816943 | 4.261500e-52 | -8.615850e-47 |
| Msa0106540 | Msa1205810 | 0.806449 | 8.182780e-50 | -8.615850e-47 |
| Msa0615070 | Msa1205810 | 0.807394 | 5.165466e-50 | -8.615850e-47 |
| Msa0616300 | Msa1205810 | 0.803191 | 3.922534e-49 | -8.615850e-47 |
| Msa0657340 | Msa1205810 | 0.813019 | 3.163720e-51 | -8.615850e-47 |
| Msa0660650 | Msa1205810 | 0.801324 | 9.503440e-49 | -8.615850e-47 |
| Msa0682110 | Msa1205810 | 0.819035 | 1.434967e-52 | -8.615850e-47 |
| Msa0682160 | Msa1205810 | 0.829395 | 5.271699e-55 | -8.615850e-47 |
| Msa0733560 | Msa1205810 | 0.809463 | 1.868515e-50 | -8.615850e-47 |
| Msa0829990 | Msa1205810 | 0.827900 | 1.211775e-54 | -8.615850e-47 |
| Msa0141410 | Msa1205810 | 0.808483 | 3.029930e-50 | -8.615850e-47 |
| Msa0177320 | Msa1205810 | 0.810741 | 9.912564e-51 | -8.615850e-47 |
| Msa0369990 | Msa1205810 | 0.824825 | 6.543311e-54 | -8.615850e-47 |
| Msa0386910 | Msa1205810 | 0.812533 | 4.041811e-51 | -8.615850e-47 |
| Msa0403740 | Msa1205810 | -0.808649 | 2.791865e-50 | -8.615850e-47 |
| Msa0405200 | Msa1205810 | 0.815860 | 7.443493e-52 | -8.615850e-47 |
| Msa0415010 | Msa1205810 | 0.804107 | 2.531417e-49 | -8.615850e-47 |
| Msa0449500 | Msa1205810 | 0.802118 | 6.527743e-49 | -8.615850e-47 |
| Msa0456450 | Msa1205810 | -0.807923 | 3.986693e-50 | -8.615850e-47 |
| Msa0459930 | Msa1205810 | 0.820934 | 5.276259e-53 | -8.615850e-47 |
| Msa1041250 | Msa1205810 | 0.802754 | 4.828878e-49 | -8.615850e-47 |
| Msa1071230 | Msa1205810 | 0.820731 | 5.873490e-53 | -8.615850e-47 |
| Msa1075090 | Msa1205810 | 0.811723 | 6.070554e-51 | -8.615850e-47 |
| Msa1095590 | Msa1205810 | 0.806065 | 9.858471e-50 | -8.615850e-47 |
| Msa0285420 | Msa1205810 | 0.813100 | 3.036344e-51 | -8.615850e-47 |
| Msa0324220 | Msa1205810 | 0.802948 | 4.402192e-49 | -8.615850e-47 |
| Msa0364030 | Msa1205810 | -0.807741 | 4.359112e-50 | -8.615850e-47 |
| Msa1108560 | Msa1205810 | 0.833972 | 3.921230e-56 | -8.615850e-47 |
| Msa1115980 | Msa1205810 | 0.803851 | 2.862113e-49 | -8.615850e-47 |
| Msa1118960 | Msa1205810 | 0.801778 | 7.668271e-49 | -8.615850e-47 |
| Msa1142390 | Msa1205810 | 0.806185 | 9.298556e-50 | -8.615850e-47 |
| Msa1179340 | Msa1205810 | 0.805329 | 1.406742e-49 | -8.615850e-47 |
| Msa1202110 | Msa1205810 | 0.823364 | 1.441686e-53 | -8.615850e-47 |
| Msa1205770 | Msa1205810 | 0.981109 | 8.529938e-152 | -8.615850e-47 |
| Msa1205810 | Msa1217260 | 0.809646 | 1.707615e-50 | -8.615850e-47 |
| Msa1205810 | Msa1217890 | 0.807123 | 5.893692e-50 | -8.615850e-47 |
| Msa1205810 | Msa1254870 | 0.823861 | 1.102942e-53 | -8.615850e-47 |
| Msa1205810 | Msa1256990 | 0.914422 | 1.953784e-84 | -8.615850e-47 |
| Msa1205810 | Msa1263110 | 0.801826 | 7.497865e-49 | -8.615850e-47 |
| Msa1205810 | Msa1297850 | 0.931763 | 2.333368e-94 | -8.615850e-47 |
| Msa1205810 | Msa1328430 | 0.823434 | 1.388183e-53 | -8.615850e-47 |
| Msa1205810 | Msa1330400 | 0.821569 | 3.766158e-53 | -8.615850e-47 |
| Msa1205810 | Msa1340440 | 0.806667 | 7.360250e-50 | -8.615850e-47 |
| Msa1205810 | Msa1342360 | -0.808729 | 2.684246e-50 | -8.615850e-47 |
| Msa1205810 | Msa1366480 | 0.802387 | 5.747482e-49 | -8.615850e-47 |
| Msa1205810 | Msa1368420 | 0.808115 | 3.629844e-50 | -8.615850e-47 |
| Msa1205810 | Msa1383220 | 0.807645 | 4.569317e-50 | -8.615850e-47 |
| Msa1205810 | Msa1405830 | 0.805331 | 1.405559e-49 | -8.615850e-47 |
| Msa1205810 | Msa1413150 | 0.809713 | 1.651437e-50 | -8.615850e-47 |
| Msa1205810 | Msa1420540 | 0.801316 | 9.537072e-49 | -8.615850e-47 |
| Msa1205810 | Msa1429470 | 0.808829 | 2.554808e-50 | -8.615850e-47 |
| Msa1205810 | Msa1437780 | 0.800400 | 1.466787e-48 | -8.615850e-47 |
| Msa0497680 | Msa1205810 | 0.801313 | 9.550430e-49 | -8.615850e-47 |
| Msa0531050 | Msa1205810 | 0.804605 | 1.994173e-49 | -8.615850e-47 |
| Msa0557250 | Msa1205810 | 0.803014 | 4.266824e-49 | -8.615850e-47 |
| Msa0565180 | Msa1205810 | 0.808166 | 3.540137e-50 | -8.615850e-47 |
| Msa0567330 | Msa1205810 | 0.802898 | 4.508303e-49 | -8.615850e-47 |
| Msa0848010 | Msa1205810 | 0.834093 | 3.658507e-56 | -8.615850e-47 |
| Msa0873880 | Msa1205810 | 0.827051 | 1.936515e-54 | -8.615850e-47 |
| Msa0873940 | Msa1205810 | 0.807390 | 5.174834e-50 | -8.615850e-47 |
| Msa0906680 | Msa1205810 | 0.816794 | 4.602849e-52 | -8.615850e-47 |
| Msa0975950 | Msa1205810 | 0.815085 | 1.107444e-51 | -8.615850e-47 |
| Msa0975960 | Msa1205810 | 0.806282 | 8.871565e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205810 | MtrunA17_Chr4g0065981 | 85.141 | 673 | 99 | 1 | 3 | 675 | 4 | 675 | 0.0 | 1217 |
| Msa1205810 | MtrunA17_Chr4g0065961 | 80.689 | 668 | 127 | 2 | 6 | 673 | 1 | 666 | 0.0 | 1134 |
| Msa1205810 | MtrunA17_Chr4g0065991 | 86.220 | 508 | 70 | 0 | 168 | 675 | 1 | 508 | 0.0 | 939 |
| Msa1205810 | MtrunA17_Chr1g0205571 | 57.292 | 672 | 282 | 3 | 6 | 673 | 1 | 671 | 0.0 | 823 |
| Msa1205810 | MtrunA17_Chr4g0023331 | 86.861 | 411 | 54 | 0 | 265 | 675 | 5 | 415 | 0.0 | 763 |
| Msa1205810 | MtrunA17_Chr1g0205541 | 47.734 | 662 | 330 | 5 | 2 | 660 | 10 | 658 | 0.0 | 654 |
| Msa1205810 | MtrunA17_Chr3g0119641 | 45.086 | 641 | 338 | 10 | 31 | 661 | 77 | 713 | 0.0 | 581 |
| Msa1205810 | MtrunA17_Chr4g0023321 | 71.321 | 265 | 72 | 4 | 1 | 264 | 1 | 262 | 7.51e-129 | 381 |
| Msa1205810 | MtrunA17_Chr3g0117081 | 27.023 | 692 | 434 | 19 | 22 | 660 | 63 | 736 | 1.47e-75 | 258 |
| Msa1205810 | MtrunA17_Chr5g0412801 | 28.239 | 687 | 413 | 23 | 32 | 660 | 44 | 708 | 3.07e-73 | 251 |
| Msa1205810 | MtrunA17_Chr8g0368011 | 27.255 | 499 | 295 | 17 | 32 | 481 | 82 | 561 | 9.31e-47 | 175 |
| Msa1205810 | MtrunA17_Chr8g0368021 | 37.795 | 127 | 77 | 2 | 544 | 668 | 37 | 163 | 4.00e-21 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205810 | AT1G31710.1 | 52.381 | 651 | 301 | 7 | 31 | 673 | 27 | 676 | 0.0 | 708 |
| Msa1205810 | AT1G31690.1 | 52.550 | 647 | 301 | 6 | 32 | 673 | 27 | 672 | 0.0 | 707 |
| Msa1205810 | AT1G31670.1 | 50.926 | 648 | 294 | 9 | 32 | 673 | 107 | 736 | 0.0 | 668 |
| Msa1205810 | AT4G14940.1 | 46.095 | 653 | 337 | 6 | 14 | 660 | 6 | 649 | 0.0 | 629 |
| Msa1205810 | AT4G12290.1 | 43.964 | 671 | 344 | 14 | 23 | 673 | 76 | 734 | 0.0 | 585 |
| Msa1205810 | AT1G62810.1 | 42.791 | 652 | 360 | 10 | 31 | 673 | 59 | 706 | 0.0 | 558 |
| Msa1205810 | AT3G43670.1 | 43.349 | 639 | 349 | 10 | 31 | 660 | 40 | 674 | 0.0 | 555 |
| Msa1205810 | AT4G12290.2 | 43.044 | 611 | 310 | 16 | 23 | 610 | 76 | 671 | 4.57e-171 | 504 |
| Msa1205810 | AT4G12280.1 | 49.481 | 289 | 138 | 2 | 393 | 673 | 5 | 293 | 9.32e-100 | 308 |
| Msa1205810 | AT4G12270.1 | 37.056 | 394 | 211 | 13 | 23 | 390 | 78 | 460 | 8.91e-78 | 256 |
| Msa1205810 | AT2G42490.1 | 27.220 | 687 | 438 | 21 | 23 | 660 | 70 | 743 | 2.45e-72 | 249 |
Find 149 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGGTATACTGGAAATTA+AGG | 0.179273 | 8_1:-62294086 | Msa1205810:CDS |
| GAATACTCTTCTTTGGTTAA+AGG | 0.191305 | 8_1:+62297077 | None:intergenic |
| TTCTTTGATGTTGGCGAGTA+TGG | 0.207924 | 8_1:-62295346 | Msa1205810:CDS |
| AGTGCTTAATATTGGCATTA+TGG | 0.226913 | 8_1:+62293382 | None:intergenic |
| CGGATGAGAACACAGAATTT+AGG | 0.259079 | 8_1:-62296509 | Msa1205810:CDS |
| GTTCAAAGAGAAAGAGTTAT+TGG | 0.263546 | 8_1:-62293883 | Msa1205810:CDS |
| GACAAGAGAATACTCTTCTT+TGG | 0.277511 | 8_1:+62297070 | None:intergenic |
| TGTGACCCAAACATTATAAT+TGG | 0.295340 | 8_1:+62293664 | None:intergenic |
| TATCTTGACCTTGATATTGA+TGG | 0.312207 | 8_1:-62293962 | Msa1205810:CDS |
| ACAATTGTAATTCCAGTAAT+AGG | 0.316826 | 8_1:+62296594 | None:intergenic |
| GTGGCAAGACTGTGTTGTTT+AGG | 0.333387 | 8_1:+62296459 | None:intergenic |
| GGATGAGAACACAGAATTTA+GGG | 0.335102 | 8_1:-62296508 | Msa1205810:CDS |
| AGATCAATGGCCACAGTGTT+AGG | 0.341442 | 8_1:-62296410 | Msa1205810:intron |
| GTGCTTAATATTGGCATTAT+GGG | 0.347461 | 8_1:+62293383 | None:intergenic |
| ATATATGTTAGGCCTATTAC+TGG | 0.351947 | 8_1:-62296606 | Msa1205810:CDS |
| AGGAGTCTTACGAATTCATT+AGG | 0.353281 | 8_1:+62295151 | None:intergenic |
| GAGAAGATACTTTAGCTGTT+TGG | 0.371659 | 8_1:-62293586 | Msa1205810:CDS |
| ATGGATTTAGCTGGGCAAAT+TGG | 0.375010 | 8_1:-62295531 | Msa1205810:intron |
| AATAGGCCTAACATATATAT+TGG | 0.375065 | 8_1:+62296611 | None:intergenic |
| TCAAAAGCAGTGCTTAATAT+TGG | 0.375787 | 8_1:+62293374 | None:intergenic |
| TATACATACCGCAGGTTTGA+TGG | 0.383102 | 8_1:+62294830 | None:intergenic |
| TGGCAAGACTGTGTTGTTTA+GGG | 0.384366 | 8_1:+62296460 | None:intergenic |
| CCCAGAGATGTTACATGGCC+TGG | 0.384705 | 8_1:-62293299 | Msa1205810:CDS |
| AGTATACAGATAGCACTTTC+AGG | 0.386964 | 8_1:-62294103 | Msa1205810:intron |
| AAAAGCTACTTTGTTCTTTG+AGG | 0.389952 | 8_1:+62297019 | None:intergenic |
| ACCAGGCCATGTAACATCTC+TGG | 0.401042 | 8_1:+62293298 | None:intergenic |
| GATAGCACTTTCAGGTATAC+TGG | 0.401908 | 8_1:-62294095 | Msa1205810:CDS |
| ATTTGTGCATGACTGTTGTT+TGG | 0.402615 | 8_1:+62297048 | None:intergenic |
| AGTGGATGAGATGGAATTGC+TGG | 0.403828 | 8_1:+62293728 | None:intergenic |
| GAATGTATGTATCAATGAAC+TGG | 0.407738 | 8_1:+62295269 | None:intergenic |
| GATGTTGGCGAGTATGGATT+TGG | 0.411471 | 8_1:-62295340 | Msa1205810:CDS |
| ATAGCATTCTTCAAGAGAAT+CGG | 0.412595 | 8_1:+62295229 | None:intergenic |
| GGAGAAAGTGTCTTAAGAAC+TGG | 0.414331 | 8_1:+62293320 | None:intergenic |
| TTCACTATTGCAAGTTCACC+TGG | 0.415482 | 8_1:+62293800 | None:intergenic |
| TAAGCACAAGGATGAGGTTA+AGG | 0.426190 | 8_1:-62294053 | Msa1205810:CDS |
| ATTGCCTTTGTGAATATTGT+CGG | 0.426449 | 8_1:+62296833 | None:intergenic |
| CCTTACTATCAAGTTTACTT+TGG | 0.426544 | 8_1:+62294914 | None:intergenic |
| CCAAAGTAAACTTGATAGTA+AGG | 0.426849 | 8_1:-62294914 | Msa1205810:CDS |
| CGAGGGATTGTTATAACACT+TGG | 0.427479 | 8_1:+62296936 | None:intergenic |
| TAGCATTCTTCAAGAGAATC+GGG | 0.427906 | 8_1:+62295230 | None:intergenic |
| GTTCATCAACCGAGAGCGTT+GGG | 0.430075 | 8_1:+62296805 | None:intergenic |
| TAACACTGTGGCCATTGATC+TGG | 0.431893 | 8_1:+62296412 | None:intergenic |
| TTTGTAAGAAGAGGAGTGTC+AGG | 0.437899 | 8_1:+62297144 | None:intergenic |
| ATGAGATAGTAATTGATTTG+AGG | 0.438145 | 8_1:-62296872 | Msa1205810:CDS |
| GTTTGTTCTACTTTCACAAT+GGG | 0.439623 | 8_1:-62296699 | Msa1205810:CDS |
| AGCTGGAGTGATATTATCAT+TGG | 0.439852 | 8_1:-62295482 | Msa1205810:CDS |
| ATGGGAAAATCTTCTTGTGC+TGG | 0.444846 | 8_1:+62293401 | None:intergenic |
| CTATGACAACGTTGTAGATT+GGG | 0.446410 | 8_1:-62294871 | Msa1205810:CDS |
| GATTGTTATAACACTTGGTT+CGG | 0.448572 | 8_1:+62296941 | None:intergenic |
| ACTATGACAACGTTGTAGAT+TGG | 0.450809 | 8_1:-62294872 | Msa1205810:CDS |
| TCAGGTATACTGGAAATTAA+GGG | 0.452813 | 8_1:-62294085 | Msa1205810:CDS |
| AGCTACTTTGTTCTTTGAGG+TGG | 0.453700 | 8_1:+62297022 | None:intergenic |
| TTTAAGACTTTCTTTGATGT+TGG | 0.457245 | 8_1:-62295355 | Msa1205810:CDS |
| ATGTGGCGTCACACTGAAAC+CGG | 0.458552 | 8_1:-62295178 | Msa1205810:CDS |
| AAAACTCGTCTGATGGATCT+TGG | 0.459489 | 8_1:+62295380 | None:intergenic |
| ACTTTCACAATGGGATGGTA+TGG | 0.469858 | 8_1:-62296690 | Msa1205810:CDS |
| GTAAAAGCACCACGTATTTG+TGG | 0.470697 | 8_1:+62293686 | None:intergenic |
| TGGCCATTGATCTGGAAGCC+TGG | 0.471032 | 8_1:+62296420 | None:intergenic |
| TTCCTCTCGAAGAAATTAGT+TGG | 0.487717 | 8_1:+62293344 | None:intergenic |
| GCGGGTGTTGAAAATGCAAT+GGG | 0.496765 | 8_1:+62297105 | None:intergenic |
| TCAATGAACTGGGCATTTGA+TGG | 0.497827 | 8_1:+62295280 | None:intergenic |
| TGTTTGTACCATCAATATCA+AGG | 0.502446 | 8_1:+62293954 | None:intergenic |
| CAATGGTTTCCCAACGCTCT+CGG | 0.502799 | 8_1:-62296814 | Msa1205810:CDS |
| GACAATATTCACAAAGGCAA+TGG | 0.505606 | 8_1:-62296831 | Msa1205810:CDS |
| GCTACTTTGTTCTTTGAGGT+GGG | 0.507842 | 8_1:+62297023 | None:intergenic |
| TTAAAGTAAAACTCGTCTGA+TGG | 0.510422 | 8_1:+62295373 | None:intergenic |
| ATGGAATTGCTGGGATCAAA+CGG | 0.516903 | 8_1:+62293738 | None:intergenic |
| ACACTGCCAATATATATGTT+AGG | 0.519464 | 8_1:-62296617 | Msa1205810:CDS |
| TTTGATGGACAATCACGGTT+GGG | 0.521247 | 8_1:+62295295 | None:intergenic |
| ATGGAGAAGAGAAAAGTAGT+AGG | 0.529413 | 8_1:-62296671 | Msa1205810:CDS |
| TCGTCTGATGGATCTTGGTA+TGG | 0.531320 | 8_1:+62295385 | None:intergenic |
| GGTCCAGGCTTCCAGATCAA+TGG | 0.535158 | 8_1:-62296423 | Msa1205810:CDS |
| CAAGATAGTAAATGTATAAG+TGG | 0.535451 | 8_1:+62293978 | None:intergenic |
| TGTTCATCAACCGAGAGCGT+TGG | 0.536879 | 8_1:+62296804 | None:intergenic |
| TCAAATCAATTACTATCTCA+TGG | 0.538621 | 8_1:+62296874 | None:intergenic |
| TCACATCAGAGCCAACCATT+CGG | 0.540930 | 8_1:-62296483 | Msa1205810:CDS |
| ATAGGATTTGATGTGCGAGC+TGG | 0.541558 | 8_1:-62295499 | Msa1205810:CDS |
| ATCTGGAAGCCTGGACCTTG+AGG | 0.542953 | 8_1:+62296429 | None:intergenic |
| ATGAAAGGAGGATATTTCAA+TGG | 0.543031 | 8_1:+62296762 | None:intergenic |
| TCAGTTAAAAGTGGATGAGA+TGG | 0.543079 | 8_1:+62293719 | None:intergenic |
| ATCACAATTGGACTTTCCCC+AGG | 0.545711 | 8_1:-62293818 | Msa1205810:CDS |
| TAATCATCCTCAGTTAAAAG+TGG | 0.547068 | 8_1:+62293710 | None:intergenic |
| CTCGTCGTGTATTATACAAA+GGG | 0.547283 | 8_1:-62295429 | Msa1205810:CDS |
| AAACTACGATTTGTAAGAAG+AGG | 0.548902 | 8_1:+62297135 | None:intergenic |
| ACTCATCAACCTCAAGGTCC+AGG | 0.550206 | 8_1:-62296438 | Msa1205810:CDS |
| AGTAAATGTATAAGTGGTCG+TGG | 0.551651 | 8_1:+62293984 | None:intergenic |
| ATTTGATGGACAATCACGGT+TGG | 0.552322 | 8_1:+62295294 | None:intergenic |
| CCAGGCCATGTAACATCTCT+GGG | 0.552849 | 8_1:+62293299 | None:intergenic |
| CTCTATGTTGATCATAGCCA+TGG | 0.553409 | 8_1:-62293608 | Msa1205810:CDS |
| GTTGTTTAGGGCCGAATGGT+TGG | 0.554904 | 8_1:+62296472 | None:intergenic |
| TCCGACATCGTTTCCGACCG+CGG | 0.557899 | 8_1:+62293763 | None:intergenic |
| AGCGGGTGTTGAAAATGCAA+TGG | 0.558186 | 8_1:+62297104 | None:intergenic |
| AGTAAGGAGTATAGTTACTG+TGG | 0.558510 | 8_1:-62294898 | Msa1205810:CDS |
| ACCGCGGTCGGAAACGATGT+CGG | 0.561820 | 8_1:-62293764 | Msa1205810:CDS |
| TTCATTGATGCAATGAAAGG+AGG | 0.563816 | 8_1:+62296750 | None:intergenic |
| CGAGAAAACAAGTTTAAAGA+CGG | 0.565335 | 8_1:-62293924 | Msa1205810:CDS |
| CAATGGTAGCCCTACCGCAA+CGG | 0.569483 | 8_1:+62296779 | None:intergenic |
| AGTTATTGAAGCTGTGCCTA+CGG | 0.569794 | 8_1:-62296529 | Msa1205810:CDS |
| AAACATTAAGCACAAGGATG+AGG | 0.570599 | 8_1:-62294059 | Msa1205810:CDS |
| CAGCTAAAGTATCTTCTCCA+TGG | 0.571385 | 8_1:+62293591 | None:intergenic |
| TTTCTCCCAGAGATGTTACA+TGG | 0.571991 | 8_1:-62293304 | Msa1205810:CDS |
| GTTCTACTTTCACAATGGGA+TGG | 0.574075 | 8_1:-62296695 | Msa1205810:CDS |
| GGAAGATCTACATGGTACCT+TGG | 0.578264 | 8_1:-62294032 | Msa1205810:CDS |
| GATTGGGAGTTCAAAACAAG+TGG | 0.579254 | 8_1:-62294855 | Msa1205810:CDS |
| TCTCGTCGTGTATTATACAA+AGG | 0.581355 | 8_1:-62295430 | Msa1205810:CDS |
| TTGGTGTCAGCAAACAGCAT+TGG | 0.581742 | 8_1:-62294013 | Msa1205810:CDS |
| GATGAACAAACCGTTGCGGT+AGG | 0.589189 | 8_1:-62296789 | Msa1205810:CDS |
| ATGAACAAACCGTTGCGGTA+GGG | 0.589298 | 8_1:-62296788 | Msa1205810:CDS |
| GGCCAACTAATTTCTTCGAG+AGG | 0.591472 | 8_1:-62293346 | Msa1205810:CDS |
| CTGTGTTGTTTAGGGCCGAA+TGG | 0.594102 | 8_1:+62296468 | None:intergenic |
| ACATACATTCACTCTGCTGA+CGG | 0.594247 | 8_1:-62295256 | Msa1205810:CDS |
| TTTAGCAGTTTGAGTCTCAG+TGG | 0.599729 | 8_1:+62293859 | None:intergenic |
| TCACTATTGCAAGTTCACCT+GGG | 0.605097 | 8_1:+62293801 | None:intergenic |
| AGTTTGTTCTACTTTCACAA+TGG | 0.606223 | 8_1:-62296700 | Msa1205810:CDS |
| AAGACGGTAAGAATCACTGA+TGG | 0.608281 | 8_1:-62293908 | Msa1205810:CDS |
| CTTGCCACTCATCAACCTCA+AGG | 0.614169 | 8_1:-62296444 | Msa1205810:CDS |
| TACGAATTCATTAGGAACGC+CGG | 0.617548 | 8_1:+62295159 | None:intergenic |
| CACTATTGCAAGTTCACCTG+GGG | 0.620051 | 8_1:+62293802 | None:intergenic |
| CATTAAGCAGTCTAACCTCA+CGG | 0.620479 | 8_1:+62296647 | None:intergenic |
| GAATAGAGACATTGTGAACA+AGG | 0.621351 | 8_1:-62293462 | Msa1205810:CDS |
| CTTTGGTTAAAGGATCAAGC+GGG | 0.622516 | 8_1:+62297087 | None:intergenic |
| GCAAATTGGAAGTTACACAT+AGG | 0.624758 | 8_1:-62295517 | Msa1205810:CDS |
| CATTGTGATGTGGCACGTAG+TGG | 0.626360 | 8_1:-62293438 | Msa1205810:CDS |
| ATTGATGATAGCAATGACAA+AGG | 0.629492 | 8_1:+62296908 | None:intergenic |
| GTAAGGAGTATAGTTACTGT+GGG | 0.630670 | 8_1:-62294897 | Msa1205810:CDS |
| AACAATATAACAATATCATG+TGG | 0.638012 | 8_1:-62295195 | Msa1205810:CDS |
| GGGCATTTGATGGACAATCA+CGG | 0.638441 | 8_1:+62295290 | None:intergenic |
| TTGTAAGAAGAGGAGTGTCA+GGG | 0.641006 | 8_1:+62297145 | None:intergenic |
| AATTCTGTGTTCTCATCCGT+AGG | 0.646497 | 8_1:+62296513 | None:intergenic |
| GGGAACAAACATTAAGCACA+AGG | 0.652766 | 8_1:-62294065 | Msa1205810:CDS |
| TCTTTGGTTAAAGGATCAAG+CGG | 0.653437 | 8_1:+62297086 | None:intergenic |
| GTGGATGAGATGGAATTGCT+GGG | 0.655196 | 8_1:+62293729 | None:intergenic |
| AATGCTGTTTGCTGACACCA+AGG | 0.662444 | 8_1:+62294015 | None:intergenic |
| GCAATGACAAAGGCTTTACG+AGG | 0.670561 | 8_1:+62296918 | None:intergenic |
| AGAAAAGTAGTAGGACCGTG+AGG | 0.677701 | 8_1:-62296662 | Msa1205810:CDS |
| GTCTCCGACAATATTCACAA+AGG | 0.679812 | 8_1:-62296837 | Msa1205810:CDS |
| GAGGTTAAGGAAGATCTACA+TGG | 0.682090 | 8_1:-62294040 | Msa1205810:CDS |
| CAATGACAAAGGCTTTACGA+GGG | 0.683483 | 8_1:+62296919 | None:intergenic |
| ATTGTGATGTGGCACGTAGT+GGG | 0.689785 | 8_1:-62293437 | Msa1205810:CDS |
| GAGAGGATTGAATCTCTCTG+AGG | 0.693702 | 8_1:-62296724 | Msa1205810:CDS |
| AAGTGGTTCCATCAAACCTG+CGG | 0.705775 | 8_1:-62294838 | Msa1205810:intron |
| AGCATTCTTCAAGAGAATCG+GGG | 0.705999 | 8_1:+62295231 | None:intergenic |
| AATGTATGTATCAATGAACT+GGG | 0.711985 | 8_1:+62295270 | None:intergenic |
| AAATGCATTACCTAACACTG+TGG | 0.720465 | 8_1:+62296400 | None:intergenic |
| TGAACAAGGACATTGTGATG+TGG | 0.731915 | 8_1:-62293448 | Msa1205810:CDS |
| TGGACCTTGAGGTTGATGAG+TGG | 0.755738 | 8_1:+62296440 | None:intergenic |
| GATGATTATCCACAAATACG+TGG | 0.767802 | 8_1:-62293695 | Msa1205810:CDS |
| GGTTGATGAACAAACCGTTG+CGG | 0.771723 | 8_1:-62296793 | Msa1205810:CDS |
| CGGGTGTTGAAAATGCAATG+GGG | 0.795860 | 8_1:+62297106 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GCATTTATTTATTTATTTTT+TGG | - | chr8_1:62294047-62294066 | Msa1205810:CDS | 10.0% |
| !! | ACTAGTATTATTATTTATTA+GGG | + | chr8_1:62294216-62294235 | None:intergenic | 10.0% |
| !! | TACTAGTATTATTATTTATT+AGG | + | chr8_1:62294217-62294236 | None:intergenic | 10.0% |
| !!! | ATTTTAATCAATAAAAATGA+AGG | + | chr8_1:62294275-62294294 | None:intergenic | 10.0% |
| !!! | GTTTAAAAATAACTTTAAAA+TGG | - | chr8_1:62294746-62294765 | Msa1205810:intron | 10.0% |
| !! | AATAAAAAAAATTAAATCAC+AGG | + | chr8_1:62294826-62294845 | None:intergenic | 10.0% |
| !!! | TTTAATTTTTTTTATTGACT+TGG | - | chr8_1:62294830-62294849 | Msa1205810:intron | 10.0% |
| !! | AGCTATTATATATTTATTTA+TGG | - | chr8_1:62294880-62294899 | Msa1205810:CDS | 10.0% |
| !!! | ATCAAATATTTTTTTTTTGA+AGG | + | chr8_1:62295302-62295321 | None:intergenic | 10.0% |
| !!! | ATTTTAGTTATTTTCAATTA+TGG | - | chr8_1:62295670-62295689 | Msa1205810:intron | 10.0% |
| !!! | AACTAAATATTTTTAATTTG+AGG | + | chr8_1:62295881-62295900 | None:intergenic | 10.0% |
| !!! | AAATATTTAGTTTCTTTTTT+AGG | - | chr8_1:62295889-62295908 | Msa1205810:intron | 10.0% |
| !! | GTTTCAATATTATTATTATA+TGG | - | chr8_1:62296304-62296323 | Msa1205810:intron | 10.0% |
| !!! | AATTAATTAATCATACTTTT+TGG | + | chr8_1:62296871-62296890 | None:intergenic | 10.0% |
| !! | AAAAAAATGATATTCTCAAA+TGG | - | chr8_1:62293459-62293478 | Msa1205810:CDS | 15.0% |
| !! | AAAAAATGATATTCTCAAAT+GGG | - | chr8_1:62293460-62293479 | Msa1205810:CDS | 15.0% |
| !!! | ATTTATTTTTTGGTTACATT+TGG | - | chr8_1:62294057-62294076 | Msa1205810:CDS | 15.0% |
| !!! | TAAAAATAACTTTAAAATGG+TGG | - | chr8_1:62294749-62294768 | Msa1205810:intron | 15.0% |
| !! | AATAATATTCAAACTATAGA+TGG | + | chr8_1:62295645-62295664 | None:intergenic | 15.0% |
| !!! | CATGATAAATTTATAGTTTT+TGG | + | chr8_1:62296033-62296052 | None:intergenic | 15.0% |
| !! | TCATATTAAAGTAATAAAGT+GGG | + | chr8_1:62296117-62296136 | None:intergenic | 15.0% |
| !! | ATCATATTAAAGTAATAAAG+TGG | + | chr8_1:62296118-62296137 | None:intergenic | 15.0% |
| !! | ACTTTATTACTTTAATATGA+TGG | - | chr8_1:62296117-62296136 | Msa1205810:intron | 15.0% |
| !! | AATATTGAAACATTATCAAT+TGG | + | chr8_1:62296295-62296314 | None:intergenic | 15.0% |
| !!! | TTTTACCAATTATAATGTTT+GGG | - | chr8_1:62296761-62296780 | Msa1205810:CDS | 15.0% |
| !! | TTATAATAGAACTGAAAAAT+GGG | - | chr8_1:62296791-62296810 | Msa1205810:CDS | 15.0% |
| !!! | TAGTTGATTTATTTTTACTT+GGG | + | chr8_1:62297161-62297180 | None:intergenic | 15.0% |
| !!! | TGAGAATATCATTTTTTTCA+GGG | + | chr8_1:62293457-62293476 | None:intergenic | 20.0% |
| !!! | TTGAGAATATCATTTTTTTC+AGG | + | chr8_1:62293458-62293477 | None:intergenic | 20.0% |
| !!! | ATAAATTTTCTATGAAGTGT+TGG | + | chr8_1:62294162-62294181 | None:intergenic | 20.0% |
| !! | TTTGTCTAATGAGTAAAAAA+GGG | + | chr8_1:62294515-62294534 | None:intergenic | 20.0% |
| !!! | TTTTTTACTCATTAGACAAA+GGG | - | chr8_1:62294515-62294534 | Msa1205810:intron | 20.0% |
| !!! | CAGATTTAATTTTAATGTCA+CGG | + | chr8_1:62294556-62294575 | None:intergenic | 20.0% |
| !! | TATTTATTTATGGATTTAGC+TGG | - | chr8_1:62294890-62294909 | Msa1205810:CDS | 20.0% |
| !! | ATTTATTTATGGATTTAGCT+GGG | - | chr8_1:62294891-62294910 | Msa1205810:CDS | 20.0% |
| !! | AACAATATAACAATATCATG+TGG | - | chr8_1:62295235-62295254 | Msa1205810:CDS | 20.0% |
| !! | TGTATAGTTTCAACAAAAAA+TGG | - | chr8_1:62295617-62295636 | Msa1205810:intron | 20.0% |
| !!! | AGATTTTCTTTCAATAAAAG+TGG | + | chr8_1:62296009-62296028 | None:intergenic | 20.0% |
| !! | TTTATATATCAAAGAGTCTT+TGG | - | chr8_1:62296165-62296184 | Msa1205810:intron | 20.0% |
| !!! | CTTTTACCAATTATAATGTT+TGG | - | chr8_1:62296760-62296779 | Msa1205810:CDS | 20.0% |
| !!! | CATTTTTCAGTTCTATTATA+AGG | + | chr8_1:62296792-62296811 | None:intergenic | 20.0% |
| !! | CTTATAATAGAACTGAAAAA+TGG | - | chr8_1:62296790-62296809 | Msa1205810:CDS | 20.0% |
| !!! | AGTTGATTTATTTTTACTTG+GGG | + | chr8_1:62297160-62297179 | None:intergenic | 20.0% |
| !!! | CTAGTTGATTTATTTTTACT+TGG | + | chr8_1:62297162-62297181 | None:intergenic | 20.0% |
| !!! | GAAAAGCGTAAATTTTATTG+TGG | + | chr8_1:62293261-62293280 | None:intergenic | 25.0% |
| !! | AAAGTAGCTTTTCACTATAT+TGG | - | chr8_1:62293422-62293441 | Msa1205810:CDS | 25.0% |
| ! | TCAAATCAATTACTATCTCA+TGG | + | chr8_1:62293559-62293578 | None:intergenic | 25.0% |
| !!! | ATGAGATAGTAATTGATTTG+AGG | - | chr8_1:62293558-62293577 | Msa1205810:intron | 25.0% |
| !! | TTTTTCATTGATGCAATGAA+AGG | + | chr8_1:62293686-62293705 | None:intergenic | 25.0% |
| ! | AATAGGCCTAACATATATAT+TGG | + | chr8_1:62293822-62293841 | None:intergenic | 25.0% |
| ! | ACAATTGTAATTCCAGTAAT+AGG | + | chr8_1:62293839-62293858 | None:intergenic | 25.0% |
| !!! | TATTTTTTGGTTACATTTGG+TGG | - | chr8_1:62294060-62294079 | Msa1205810:CDS | 25.0% |
| !!! | ATTTTTTGGTTACATTTGGT+GGG | - | chr8_1:62294061-62294080 | Msa1205810:CDS | 25.0% |
| ! | AATTTAGAAAAATAACACCG+TGG | - | chr8_1:62294100-62294119 | Msa1205810:intron | 25.0% |
| !!! | TTTTTATTTGTTGTCAACCA+CGG | + | chr8_1:62294120-62294139 | None:intergenic | 25.0% |
| ! | CTTTGTCTAATGAGTAAAAA+AGG | + | chr8_1:62294516-62294535 | None:intergenic | 25.0% |
| !!! | CTTTTTTACTCATTAGACAA+AGG | - | chr8_1:62294514-62294533 | Msa1205810:intron | 25.0% |
| !!! | CTCTATTAGAAGAGTTTTAA+TGG | - | chr8_1:62294655-62294674 | Msa1205810:intron | 25.0% |
| !! | TTTTAATGGAGATGAATTAC+AGG | - | chr8_1:62294669-62294688 | Msa1205810:intron | 25.0% |
| ! | GTTTACATGATATTATCATG+AGG | + | chr8_1:62294711-62294730 | None:intergenic | 25.0% |
| !!! | TTTTTTTATTGACTTGGACA+TGG | - | chr8_1:62294836-62294855 | Msa1205810:intron | 25.0% |
| !! | TTTAAGACTTTCTTTGATGT+TGG | - | chr8_1:62295075-62295094 | Msa1205810:intron | 25.0% |
| ! | AATGTATGTATCAATGAACT+GGG | + | chr8_1:62295163-62295182 | None:intergenic | 25.0% |
| ! | AAAAAATCAATTGTGAGTAG+TGG | - | chr8_1:62295351-62295370 | Msa1205810:CDS | 25.0% |
| ! | TATGAATTTGCATACACTAT+TGG | + | chr8_1:62295397-62295416 | None:intergenic | 25.0% |
| !!! | TACTAGTATGTTTTTTCTTG+TGG | - | chr8_1:62295695-62295714 | Msa1205810:intron | 25.0% |
| !! | TGATGAGATTAACTTTTATG+CGG | - | chr8_1:62295740-62295759 | Msa1205810:intron | 25.0% |
| ! | AGGTCATTTAAATGCTTAAT+TGG | - | chr8_1:62296067-62296086 | Msa1205810:intron | 25.0% |
| !! | CTTTAATATGATGGAGTAAT+TGG | - | chr8_1:62296126-62296145 | Msa1205810:intron | 25.0% |
| ! | CAAGATAGTAAATGTATAAG+TGG | + | chr8_1:62296455-62296474 | None:intergenic | 25.0% |
| ! | AAGCGTAAATTTTATTGTGG+TGG | + | chr8_1:62293258-62293277 | None:intergenic | 30.0% |
| AAACTACGATTTGTAAGAAG+AGG | + | chr8_1:62293298-62293317 | None:intergenic | 30.0% | |
| GAATACTCTTCTTTGGTTAA+AGG | + | chr8_1:62293356-62293375 | None:intergenic | 30.0% | |
| ! | AAAAGCTACTTTGTTCTTTG+AGG | + | chr8_1:62293414-62293433 | None:intergenic | 30.0% |
| GATTGTTATAACACTTGGTT+CGG | + | chr8_1:62293492-62293511 | None:intergenic | 30.0% | |
| ! | ATTGATGATAGCAATGACAA+AGG | + | chr8_1:62293525-62293544 | None:intergenic | 30.0% |
| ATTGCCTTTGTGAATATTGT+CGG | + | chr8_1:62293600-62293619 | None:intergenic | 30.0% | |
| ATGAAAGGAGGATATTTCAA+TGG | + | chr8_1:62293671-62293690 | None:intergenic | 30.0% | |
| ATTGCATCAATGAAAAAGAG+AGG | - | chr8_1:62293689-62293708 | Msa1205810:CDS | 30.0% | |
| ! | AGTTTGTTCTACTTTCACAA+TGG | - | chr8_1:62293730-62293749 | Msa1205810:CDS | 30.0% |
| GTTTGTTCTACTTTCACAAT+GGG | - | chr8_1:62293731-62293750 | Msa1205810:CDS | 30.0% | |
| ACACTGCCAATATATATGTT+AGG | - | chr8_1:62293813-62293832 | Msa1205810:CDS | 30.0% | |
| ATATATGTTAGGCCTATTAC+TGG | - | chr8_1:62293824-62293843 | Msa1205810:CDS | 30.0% | |
| AAAAGTCAAATTGTACCCAA+AGG | - | chr8_1:62294461-62294480 | Msa1205810:intron | 30.0% | |
| TACCCAAAGGATTTAAATGA+AGG | - | chr8_1:62294474-62294493 | Msa1205810:intron | 30.0% | |
| ACCCAAAGGATTTAAATGAA+GGG | - | chr8_1:62294475-62294494 | Msa1205810:intron | 30.0% | |
| TTAAAGTAAAACTCGTCTGA+TGG | + | chr8_1:62295060-62295079 | None:intergenic | 30.0% | |
| GAATGTATGTATCAATGAAC+TGG | + | chr8_1:62295164-62295183 | None:intergenic | 30.0% | |
| ATAGCATTCTTCAAGAGAAT+CGG | + | chr8_1:62295204-62295223 | None:intergenic | 30.0% | |
| CCTTACTATCAAGTTTACTT+TGG | + | chr8_1:62295519-62295538 | None:intergenic | 30.0% | |
| ! | CCAAAGTAAACTTGATAGTA+AGG | - | chr8_1:62295516-62295535 | Msa1205810:CDS | 30.0% |
| ! | TTTTCTTGTGGTATGAATGA+TGG | - | chr8_1:62295707-62295726 | Msa1205810:intron | 30.0% |
| TTTCTTGTGGTATGAATGAT+GGG | - | chr8_1:62295708-62295727 | Msa1205810:intron | 30.0% | |
| !!! | GTATGAATGATGGGTTTTTT+AGG | - | chr8_1:62295717-62295736 | Msa1205810:intron | 30.0% |
| TATATAAAGCATGTGTCTCA+CGG | + | chr8_1:62296153-62296172 | None:intergenic | 30.0% | |
| AACCACGTGTTAAACATATT+GGG | + | chr8_1:62296241-62296260 | None:intergenic | 30.0% | |
| AAACCACGTGTTAAACATAT+TGG | + | chr8_1:62296242-62296261 | None:intergenic | 30.0% | |
| TTCAGGTATACTGGAAATTA+AGG | - | chr8_1:62296344-62296363 | Msa1205810:intron | 30.0% | |
| TCAGGTATACTGGAAATTAA+GGG | - | chr8_1:62296345-62296364 | Msa1205810:intron | 30.0% | |
| TATCTTGACCTTGATATTGA+TGG | - | chr8_1:62296468-62296487 | Msa1205810:CDS | 30.0% | |
| TGTTTGTACCATCAATATCA+AGG | + | chr8_1:62296479-62296498 | None:intergenic | 30.0% | |
| CGAGAAAACAAGTTTAAAGA+CGG | - | chr8_1:62296506-62296525 | Msa1205810:CDS | 30.0% | |
| GTTCAAAGAGAAAGAGTTAT+TGG | - | chr8_1:62296547-62296566 | Msa1205810:CDS | 30.0% | |
| TCAGATGCAAAAATCACAAT+TGG | - | chr8_1:62296600-62296619 | Msa1205810:CDS | 30.0% | |
| TAATCATCCTCAGTTAAAAG+TGG | + | chr8_1:62296723-62296742 | None:intergenic | 30.0% | |
| TGTGACCCAAACATTATAAT+TGG | + | chr8_1:62296769-62296788 | None:intergenic | 30.0% | |
| ATTAAAATGTACGTTTGCAC+AGG | - | chr8_1:62296946-62296965 | Msa1205810:CDS | 30.0% | |
| GTGCTTAATATTGGCATTAT+GGG | + | chr8_1:62297050-62297069 | None:intergenic | 30.0% | |
| AGTGCTTAATATTGGCATTA+TGG | + | chr8_1:62297051-62297070 | None:intergenic | 30.0% | |
| TCAAAAGCAGTGCTTAATAT+TGG | + | chr8_1:62297059-62297078 | None:intergenic | 30.0% | |
| TCTTTGGTTAAAGGATCAAG+CGG | + | chr8_1:62293347-62293366 | None:intergenic | 35.0% | |
| GACAAGAGAATACTCTTCTT+TGG | + | chr8_1:62293363-62293382 | None:intergenic | 35.0% | |
| ATTTGTGCATGACTGTTGTT+TGG | + | chr8_1:62293385-62293404 | None:intergenic | 35.0% | |
| GACAATATTCACAAAGGCAA+TGG | - | chr8_1:62293599-62293618 | Msa1205810:CDS | 35.0% | |
| TTCATTGATGCAATGAAAGG+AGG | + | chr8_1:62293683-62293702 | None:intergenic | 35.0% | |
| ATGGAGAAGAGAAAAGTAGT+AGG | - | chr8_1:62293759-62293778 | Msa1205810:CDS | 35.0% | |
| GGATGAGAACACAGAATTTA+GGG | - | chr8_1:62293922-62293941 | Msa1205810:CDS | 35.0% | |
| AAATGCATTACCTAACACTG+TGG | + | chr8_1:62294033-62294052 | None:intergenic | 35.0% | |
| GCCCTTCATTTAAATCCTTT+GGG | + | chr8_1:62294479-62294498 | None:intergenic | 35.0% | |
| !! | TTAAAATGGTGGATGTCATC+AGG | - | chr8_1:62294760-62294779 | Msa1205810:intron | 35.0% |
| GCAAATTGGAAGTTACACAT+AGG | - | chr8_1:62294913-62294932 | Msa1205810:CDS | 35.0% | |
| AGCTGGAGTGATATTATCAT+TGG | - | chr8_1:62294948-62294967 | Msa1205810:intron | 35.0% | |
| TCTCGTCGTGTATTATACAA+AGG | - | chr8_1:62295000-62295019 | Msa1205810:intron | 35.0% | |
| CTCGTCGTGTATTATACAAA+GGG | - | chr8_1:62295001-62295020 | Msa1205810:intron | 35.0% | |
| TAGCATTCTTCAAGAGAATC+GGG | + | chr8_1:62295203-62295222 | None:intergenic | 35.0% | |
| AGGAGTCTTACGAATTCATT+AGG | + | chr8_1:62295282-62295301 | None:intergenic | 35.0% | |
| ! | AGTAAGGAGTATAGTTACTG+TGG | - | chr8_1:62295532-62295551 | Msa1205810:intron | 35.0% |
| ! | GTAAGGAGTATAGTTACTGT+GGG | - | chr8_1:62295533-62295552 | Msa1205810:intron | 35.0% |
| ACTATGACAACGTTGTAGAT+TGG | - | chr8_1:62295558-62295577 | Msa1205810:intron | 35.0% | |
| CTATGACAACGTTGTAGATT+GGG | - | chr8_1:62295559-62295578 | Msa1205810:intron | 35.0% | |
| GTAATCAAATCACGCTATAG+AGG | - | chr8_1:62295838-62295857 | Msa1205810:intron | 35.0% | |
| ACATATTGGGTTACATGTCT+TGG | + | chr8_1:62296228-62296247 | None:intergenic | 35.0% | |
| AACCCAATATGTTTAACACG+TGG | - | chr8_1:62296236-62296255 | Msa1205810:intron | 35.0% | |
| AGTATACAGATAGCACTTTC+AGG | - | chr8_1:62296327-62296346 | Msa1205810:intron | 35.0% | |
| AAACATTAAGCACAAGGATG+AGG | - | chr8_1:62296371-62296390 | Msa1205810:intron | 35.0% | |
| AGTAAATGTATAAGTGGTCG+TGG | + | chr8_1:62296449-62296468 | None:intergenic | 35.0% | |
| GAATCCAAACAAAAAAACCG+CGG | - | chr8_1:62296650-62296669 | Msa1205810:CDS | 35.0% | |
| TCAGTTAAAAGTGGATGAGA+TGG | + | chr8_1:62296714-62296733 | None:intergenic | 35.0% | |
| !! | ATCTCATCCACTTTTAACTG+AGG | - | chr8_1:62296713-62296732 | Msa1205810:CDS | 35.0% |
| GATGATTATCCACAAATACG+TGG | - | chr8_1:62296735-62296754 | Msa1205810:CDS | 35.0% | |
| AATAGAACTGAAAAATGGGC+TGG | - | chr8_1:62296795-62296814 | Msa1205810:CDS | 35.0% | |
| GAGAAGATACTTTAGCTGTT+TGG | - | chr8_1:62296844-62296863 | Msa1205810:CDS | 35.0% | |
| GAATAGAGACATTGTGAACA+AGG | - | chr8_1:62296968-62296987 | Msa1205810:CDS | 35.0% | |
| TTCCTCTCGAAGAAATTAGT+TGG | + | chr8_1:62297089-62297108 | None:intergenic | 35.0% | |
| !! | TTGTAAGAAGAGGAGTGTCA+GGG | + | chr8_1:62293288-62293307 | None:intergenic | 40.0% |
| !! | TTTGTAAGAAGAGGAGTGTC+AGG | + | chr8_1:62293289-62293308 | None:intergenic | 40.0% |
| CTTTGGTTAAAGGATCAAGC+GGG | + | chr8_1:62293346-62293365 | None:intergenic | 40.0% | |
| !! | GCTACTTTGTTCTTTGAGGT+GGG | + | chr8_1:62293410-62293429 | None:intergenic | 40.0% |
| ! | AGCTACTTTGTTCTTTGAGG+TGG | + | chr8_1:62293411-62293430 | None:intergenic | 40.0% |
| CGAGGGATTGTTATAACACT+TGG | + | chr8_1:62293497-62293516 | None:intergenic | 40.0% | |
| CAATGACAAAGGCTTTACGA+GGG | + | chr8_1:62293514-62293533 | None:intergenic | 40.0% | |
| GTCTCCGACAATATTCACAA+AGG | - | chr8_1:62293593-62293612 | Msa1205810:CDS | 40.0% | |
| GTTCTACTTTCACAATGGGA+TGG | - | chr8_1:62293735-62293754 | Msa1205810:CDS | 40.0% | |
| ACTTTCACAATGGGATGGTA+TGG | - | chr8_1:62293740-62293759 | Msa1205810:CDS | 40.0% | |
| CATTAAGCAGTCTAACCTCA+CGG | + | chr8_1:62293786-62293805 | None:intergenic | 40.0% | |
| AGTTATTGAAGCTGTGCCTA+CGG | - | chr8_1:62293901-62293920 | Msa1205810:CDS | 40.0% | |
| AATTCTGTGTTCTCATCCGT+AGG | + | chr8_1:62293920-62293939 | None:intergenic | 40.0% | |
| CGGATGAGAACACAGAATTT+AGG | - | chr8_1:62293921-62293940 | Msa1205810:CDS | 40.0% | |
| !! | TGGCAAGACTGTGTTGTTTA+GGG | + | chr8_1:62293973-62293992 | None:intergenic | 40.0% |
| CGCCCTTCATTTAAATCCTT+TGG | + | chr8_1:62294480-62294499 | None:intergenic | 40.0% | |
| ATGGATTTAGCTGGGCAAAT+TGG | - | chr8_1:62294899-62294918 | Msa1205810:CDS | 40.0% | |
| ! | AAAACTCGTCTGATGGATCT+TGG | + | chr8_1:62295053-62295072 | None:intergenic | 40.0% |
| TTCTTTGATGTTGGCGAGTA+TGG | - | chr8_1:62295084-62295103 | Msa1205810:intron | 40.0% | |
| ! | TTTGATGGACAATCACGGTT+GGG | + | chr8_1:62295138-62295157 | None:intergenic | 40.0% |
| ! | ATTTGATGGACAATCACGGT+TGG | + | chr8_1:62295139-62295158 | None:intergenic | 40.0% |
| TCAATGAACTGGGCATTTGA+TGG | + | chr8_1:62295153-62295172 | None:intergenic | 40.0% | |
| ACATACATTCACTCTGCTGA+CGG | - | chr8_1:62295174-62295193 | Msa1205810:CDS | 40.0% | |
| AGCATTCTTCAAGAGAATCG+GGG | + | chr8_1:62295202-62295221 | None:intergenic | 40.0% | |
| TACGAATTCATTAGGAACGC+CGG | + | chr8_1:62295274-62295293 | None:intergenic | 40.0% | |
| GATTGGGAGTTCAAAACAAG+TGG | - | chr8_1:62295575-62295594 | Msa1205810:intron | 40.0% | |
| TATACATACCGCAGGTTTGA+TGG | + | chr8_1:62295603-62295622 | None:intergenic | 40.0% | |
| GTTGAAACTATACATACCGC+AGG | + | chr8_1:62295611-62295630 | None:intergenic | 40.0% | |
| ! | TGAGCTTAGCTTAGTTGGTA+GGG | - | chr8_1:62295808-62295827 | Msa1205810:intron | 40.0% |
| AGCATTTAAATGACCTGCGT+GGG | + | chr8_1:62296063-62296082 | None:intergenic | 40.0% | |
| AAGCATTTAAATGACCTGCG+TGG | + | chr8_1:62296064-62296083 | None:intergenic | 40.0% | |
| ! | GATAGCACTTTCAGGTATAC+TGG | - | chr8_1:62296335-62296354 | Msa1205810:intron | 40.0% |
| GGGAACAAACATTAAGCACA+AGG | - | chr8_1:62296365-62296384 | Msa1205810:intron | 40.0% | |
| TAAGCACAAGGATGAGGTTA+AGG | - | chr8_1:62296377-62296396 | Msa1205810:intron | 40.0% | |
| GAGGTTAAGGAAGATCTACA+TGG | - | chr8_1:62296390-62296409 | Msa1205810:intron | 40.0% | |
| AAGACGGTAAGAATCACTGA+TGG | - | chr8_1:62296522-62296541 | Msa1205810:CDS | 40.0% | |
| TTTAGCAGTTTGAGTCTCAG+TGG | + | chr8_1:62296574-62296593 | None:intergenic | 40.0% | |
| TCACTATTGCAAGTTCACCT+GGG | + | chr8_1:62296632-62296651 | None:intergenic | 40.0% | |
| TTCACTATTGCAAGTTCACC+TGG | + | chr8_1:62296633-62296652 | None:intergenic | 40.0% | |
| ATGGAATTGCTGGGATCAAA+CGG | + | chr8_1:62296695-62296714 | None:intergenic | 40.0% | |
| !! | GTAAAAGCACCACGTATTTG+TGG | + | chr8_1:62296747-62296766 | None:intergenic | 40.0% |
| CTCTATGTTGATCATAGCCA+TGG | - | chr8_1:62296822-62296841 | Msa1205810:CDS | 40.0% | |
| ! | CAGCTAAAGTATCTTCTCCA+TGG | + | chr8_1:62296842-62296861 | None:intergenic | 40.0% |
| TGAACAAGGACATTGTGATG+TGG | - | chr8_1:62296982-62297001 | Msa1205810:CDS | 40.0% | |
| ATGGGAAAATCTTCTTGTGC+TGG | + | chr8_1:62297032-62297051 | None:intergenic | 40.0% | |
| !! | GGAGAAAGTGTCTTAAGAAC+TGG | + | chr8_1:62297113-62297132 | None:intergenic | 40.0% |
| TTTCTCCCAGAGATGTTACA+TGG | - | chr8_1:62297126-62297145 | Msa1205810:CDS | 40.0% | |
| !! | TATTTTTACTTGGGGCAACC+AGG | + | chr8_1:62297152-62297171 | None:intergenic | 40.0% |
| !! | CGGGTGTTGAAAATGCAATG+GGG | + | chr8_1:62293327-62293346 | None:intergenic | 45.0% |
| !! | GCGGGTGTTGAAAATGCAAT+GGG | + | chr8_1:62293328-62293347 | None:intergenic | 45.0% |
| !! | AGCGGGTGTTGAAAATGCAA+TGG | + | chr8_1:62293329-62293348 | None:intergenic | 45.0% |
| GCAATGACAAAGGCTTTACG+AGG | + | chr8_1:62293515-62293534 | None:intergenic | 45.0% | |
| !! | GGTTGATGAACAAACCGTTG+CGG | - | chr8_1:62293637-62293656 | Msa1205810:CDS | 45.0% |
| ATGAACAAACCGTTGCGGTA+GGG | - | chr8_1:62293642-62293661 | Msa1205810:CDS | 45.0% | |
| GAGAGGATTGAATCTCTCTG+AGG | - | chr8_1:62293706-62293725 | Msa1205810:CDS | 45.0% | |
| AGAAAAGTAGTAGGACCGTG+AGG | - | chr8_1:62293768-62293787 | Msa1205810:CDS | 45.0% | |
| TCACATCAGAGCCAACCATT+CGG | - | chr8_1:62293947-62293966 | Msa1205810:CDS | 45.0% | |
| !! | GTGGCAAGACTGTGTTGTTT+AGG | + | chr8_1:62293974-62293993 | None:intergenic | 45.0% |
| TAACACTGTGGCCATTGATC+TGG | + | chr8_1:62294021-62294040 | None:intergenic | 45.0% | |
| AGATCAATGGCCACAGTGTT+AGG | - | chr8_1:62294020-62294039 | Msa1205810:CDS | 45.0% | |
| ATAGGATTTGATGTGCGAGC+TGG | - | chr8_1:62294931-62294950 | Msa1205810:CDS | 45.0% | |
| ! | TCGTCTGATGGATCTTGGTA+TGG | + | chr8_1:62295048-62295067 | None:intergenic | 45.0% |
| GATGTTGGCGAGTATGGATT+TGG | - | chr8_1:62295090-62295109 | Msa1205810:intron | 45.0% | |
| ! | GGGCATTTGATGGACAATCA+CGG | + | chr8_1:62295143-62295162 | None:intergenic | 45.0% |
| AAGTGGTTCCATCAAACCTG+CGG | - | chr8_1:62295592-62295611 | Msa1205810:intron | 45.0% | |
| CATCGTGAGCTTAGCTTAGT+TGG | - | chr8_1:62295803-62295822 | Msa1205810:intron | 45.0% | |
| GTGAGCTTAGCTTAGTTGGT+AGG | - | chr8_1:62295807-62295826 | Msa1205810:intron | 45.0% | |
| TTTAAATGACCTGCGTGGGT+GGG | + | chr8_1:62296059-62296078 | None:intergenic | 45.0% | |
| ATTTAAATGACCTGCGTGGG+TGG | + | chr8_1:62296060-62296079 | None:intergenic | 45.0% | |
| GGAAGATCTACATGGTACCT+TGG | - | chr8_1:62296398-62296417 | Msa1205810:intron | 45.0% | |
| ! | AATGCTGTTTGCTGACACCA+AGG | + | chr8_1:62296418-62296437 | None:intergenic | 45.0% |
| !! | TTGGTGTCAGCAAACAGCAT+TGG | - | chr8_1:62296417-62296436 | Msa1205810:CDS | 45.0% |
| ATCACAATTGGACTTTCCCC+AGG | - | chr8_1:62296612-62296631 | Msa1205810:CDS | 45.0% | |
| CACTATTGCAAGTTCACCTG+GGG | + | chr8_1:62296631-62296650 | None:intergenic | 45.0% | |
| CCAAACAAAAAAACCGCGGT+CGG | - | chr8_1:62296654-62296673 | Msa1205810:CDS | 45.0% | |
| GTGGATGAGATGGAATTGCT+GGG | + | chr8_1:62296704-62296723 | None:intergenic | 45.0% | |
| AGTGGATGAGATGGAATTGC+TGG | + | chr8_1:62296705-62296724 | None:intergenic | 45.0% | |
| !! | AGAACTGAAAAATGGGCTGG+TGG | - | chr8_1:62296798-62296817 | Msa1205810:CDS | 45.0% |
| ATTGTGATGTGGCACGTAGT+GGG | - | chr8_1:62296993-62297012 | Msa1205810:CDS | 45.0% | |
| !! | TAAGCACTGCTTTTGAGCTG+AGG | - | chr8_1:62297063-62297082 | Msa1205810:CDS | 45.0% |
| GGCCAACTAATTTCTTCGAG+AGG | - | chr8_1:62297084-62297103 | Msa1205810:CDS | 45.0% | |
| CAATGGTTTCCCAACGCTCT+CGG | - | chr8_1:62293616-62293635 | Msa1205810:CDS | 50.0% | |
| !! | GTTCATCAACCGAGAGCGTT+GGG | + | chr8_1:62293628-62293647 | None:intergenic | 50.0% |
| ! | TGTTCATCAACCGAGAGCGT+TGG | + | chr8_1:62293629-62293648 | None:intergenic | 50.0% |
| GATGAACAAACCGTTGCGGT+AGG | - | chr8_1:62293641-62293660 | Msa1205810:CDS | 50.0% | |
| ! | GTTGTTTAGGGCCGAATGGT+TGG | + | chr8_1:62293961-62293980 | None:intergenic | 50.0% |
| !! | CTGTGTTGTTTAGGGCCGAA+TGG | + | chr8_1:62293965-62293984 | None:intergenic | 50.0% |
| CTTGCCACTCATCAACCTCA+AGG | - | chr8_1:62293986-62294005 | Msa1205810:CDS | 50.0% | |
| !! | TGGACCTTGAGGTTGATGAG+TGG | + | chr8_1:62293993-62294012 | None:intergenic | 50.0% |
| ACTCATCAACCTCAAGGTCC+AGG | - | chr8_1:62293992-62294011 | Msa1205810:CDS | 50.0% | |
| ATGTGGCGTCACACTGAAAC+CGG | - | chr8_1:62295252-62295271 | Msa1205810:CDS | 50.0% | |
| TTAAATGACCTGCGTGGGTG+GGG | + | chr8_1:62296058-62296077 | None:intergenic | 50.0% | |
| !!! | CCGACCGCGGTTTTTTTGTT+TGG | + | chr8_1:62296657-62296676 | None:intergenic | 50.0% |
| CATTGTGATGTGGCACGTAG+TGG | - | chr8_1:62296992-62297011 | Msa1205810:CDS | 50.0% | |
| CCAGGCCATGTAACATCTCT+GGG | + | chr8_1:62297134-62297153 | None:intergenic | 50.0% | |
| ACCAGGCCATGTAACATCTC+TGG | + | chr8_1:62297135-62297154 | None:intergenic | 50.0% | |
| CAATGGTAGCCCTACCGCAA+CGG | + | chr8_1:62293654-62293673 | None:intergenic | 55.0% | |
| ATCTGGAAGCCTGGACCTTG+AGG | + | chr8_1:62294004-62294023 | None:intergenic | 55.0% | |
| GGTCCAGGCTTCCAGATCAA+TGG | - | chr8_1:62294007-62294026 | Msa1205810:CDS | 55.0% | |
| TGGCCATTGATCTGGAAGCC+TGG | + | chr8_1:62294013-62294032 | None:intergenic | 55.0% | |
| CCCAGAGATGTTACATGGCC+TGG | - | chr8_1:62297131-62297150 | Msa1205810:CDS | 55.0% | |
| ATCATGTACCCCACCCACGC+AGG | - | chr8_1:62296047-62296066 | Msa1205810:intron | 60.0% | |
| ACCGCGGTCGGAAACGATGT+CGG | - | chr8_1:62296666-62296685 | Msa1205810:CDS | 60.0% | |
| TCCGACATCGTTTCCGACCG+CGG | + | chr8_1:62296670-62296689 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 62293248 | 62297204 | 62293248 | ID=Msa1205810;Name=Msa1205810 |
| chr8_1 | mRNA | 62293248 | 62297204 | 62293248 | ID=Msa1205810-mRNA-1;Parent=Msa1205810;Name=Msa1205810-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|1|0.6|1|1|1|5|38|675 |
| chr8_1 | exon | 62293248 | 62293484 | 62293248 | ID=Msa1205810-mRNA-1:exon:20254;Parent=Msa1205810-mRNA-1 |
| chr8_1 | exon | 62293578 | 62294116 | 62293578 | ID=Msa1205810-mRNA-1:exon:20253;Parent=Msa1205810-mRNA-1 |
| chr8_1 | exon | 62294839 | 62294952 | 62294839 | ID=Msa1205810-mRNA-1:exon:20252;Parent=Msa1205810-mRNA-1 |
| chr8_1 | exon | 62295162 | 62295543 | 62295162 | ID=Msa1205810-mRNA-1:exon:20251;Parent=Msa1205810-mRNA-1 |
| chr8_1 | exon | 62296411 | 62297204 | 62296411 | ID=Msa1205810-mRNA-1:exon:20250;Parent=Msa1205810-mRNA-1 |
| chr8_1 | CDS | 62296411 | 62297204 | 62296411 | ID=Msa1205810-mRNA-1:cds;Parent=Msa1205810-mRNA-1 |
| chr8_1 | CDS | 62295162 | 62295543 | 62295162 | ID=Msa1205810-mRNA-1:cds;Parent=Msa1205810-mRNA-1 |
| chr8_1 | CDS | 62294839 | 62294952 | 62294839 | ID=Msa1205810-mRNA-1:cds;Parent=Msa1205810-mRNA-1 |
| chr8_1 | CDS | 62293578 | 62294116 | 62293578 | ID=Msa1205810-mRNA-1:cds;Parent=Msa1205810-mRNA-1 |
| chr8_1 | CDS | 62293286 | 62293484 | 62293286 | ID=Msa1205810-mRNA-1:cds;Parent=Msa1205810-mRNA-1 |
| chr8_1 | three_prime_UTR | 62293248 | 62293285 | 62293248 | ID=Msa1205810-mRNA-1:three_prime_utr;Parent=Msa1205810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
