AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1420540


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1420540 MtrunA17_Chr7g0267551 94.218 294 17 0 1 294 1 294 0.0 530
Msa1420540 MtrunA17_Chr1g0177121 70.175 285 72 2 1 272 1 285 4.49e-146 412
Msa1420540 MtrunA17_Chr1g0177131 58.909 275 106 1 7 274 17 291 3.59e-116 337
Msa1420540 MtrunA17_Chr4g0048121 60.324 247 98 0 28 274 34 280 1.28e-109 320
Msa1420540 MtrunA17_Chr2g0281201 57.490 247 105 0 45 291 4 250 1.27e-108 315
Msa1420540 MtrunA17_Chr5g0398891 49.383 243 122 1 31 272 54 296 2.08e-83 253
Msa1420540 MtrunA17_Chr6g0461261 47.368 247 130 0 28 274 34 280 2.57e-77 238
Msa1420540 MtrunA17_Chr2g0322801 42.449 245 141 0 28 272 39 283 1.25e-64 205
Msa1420540 MtrunA17_Chr5g0404401 41.502 253 136 3 24 273 35 278 8.94e-58 187
Msa1420540 MtrunA17_Chr8g0370611 44.318 88 47 1 24 109 35 122 3.94e-14 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1420540 AT3G11820.1 66.023 259 87 1 15 272 30 288 2.57e-123 356
Msa1420540 AT3G11820.2 68.571 245 77 0 28 272 13 257 6.01e-123 354
Msa1420540 AT1G61290.1 53.584 293 131 1 1 288 1 293 4.35e-114 331
Msa1420540 AT1G61290.2 53.584 293 131 1 1 288 1 293 4.35e-114 331
Msa1420540 AT1G11250.1 56.522 276 116 2 1 274 1 274 1.20e-110 322
Msa1420540 AT3G52400.1 58.131 289 106 3 1 274 1 289 2.31e-108 318
Msa1420540 AT4G03330.1 52.492 301 131 3 1 291 1 299 8.57e-102 300
Msa1420540 AT3G03800.2 43.011 279 152 2 1 272 1 279 2.70e-72 225
Msa1420540 AT3G03800.1 43.011 279 152 2 1 272 1 279 2.70e-72 225
Msa1420540 AT1G08560.1 43.077 260 142 3 15 272 31 286 5.94e-70 219
Msa1420540 AT5G08080.1 48.425 254 131 0 19 272 25 278 1.51e-69 218
Msa1420540 AT5G08080.4 48.425 254 131 0 19 272 25 278 1.51e-69 218
Msa1420540 AT5G08080.3 46.038 265 132 2 19 272 25 289 1.17e-66 211
Msa1420540 AT2G18260.2 36.667 270 164 2 21 290 40 302 2.11e-56 184
Msa1420540 AT2G18260.1 36.667 270 164 2 21 290 40 302 2.11e-56 184
Msa1420540 AT5G08080.5 46.023 176 95 0 19 194 25 200 7.27e-38 134
Msa1420540 AT5G08080.2 46.023 176 95 0 19 194 25 200 7.27e-38 134

Find 82 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGCTTCATCAAGTGTTTC+TGG 0.159765 tig0024822:-53732 Msa1420540:CDS
CGGAGATACTTTGCTGTTAA+TGG 0.175180 tig0024822:-54825 Msa1420540:CDS
ATCAAAAGAATACCCGTAAA+TGG 0.262883 tig0024822:-53592 Msa1420540:CDS
GTTTCTGGACATGGCAGTTT+TGG 0.265868 tig0024822:-53717 Msa1420540:CDS
TAATTAATTAGTTCTCAAAA+TGG 0.299398 tig0024822:-53483 Msa1420540:three_prime_UTR
AATAATTAGGAATAGTAAAA+TGG 0.321065 tig0024822:+53559 None:intergenic
TGGCAAAACATGTCCATTTA+CGG 0.321225 tig0024822:+53579 None:intergenic
TCAATTCTTCACCTTGGGCT+TGG 0.323182 tig0024822:+53693 None:intergenic
ACGAATTTGCTCGCATCATT+TGG 0.333506 tig0024822:+53657 None:intergenic
GAAGAAAGCAAGATTCATTA+AGG 0.337950 tig0024822:-55036 Msa1420540:CDS
TTATAACCAAAGCAATAATT+AGG 0.340259 tig0024822:+53546 None:intergenic
CGGTGGAGGTTCCCGCCATC+TGG 0.342807 tig0024822:+55240 None:intergenic
GTCATTCAATTCTTCACCTT+GGG 0.347976 tig0024822:+53688 None:intergenic
TGCGAGCAAATTCGTATGTT+AGG 0.368696 tig0024822:-53649 Msa1420540:CDS
CTGTTGCTCTCCCTTGCTCT+TGG 0.369883 tig0024822:+53822 None:intergenic
ACTATTCCTAATTATTGCTT+TGG 0.374173 tig0024822:-53552 Msa1420540:CDS
GAAGAATTTGAAAGATTCAA+TGG 0.398160 tig0024822:-54904 Msa1420540:CDS
TGCTCTCCCTTGCTCTTGGA+TGG 0.409592 tig0024822:+53826 None:intergenic
GGCAAAACATGTCCATTTAC+GGG 0.415302 tig0024822:+53580 None:intergenic
GAGTTTGCCTGATTGTGGAC+CGG 0.420074 tig0024822:-54973 Msa1420540:CDS
TTGTGGACCGGGTTCATCTT+CGG 0.423936 tig0024822:-54961 Msa1420540:CDS
ACACGGTTGGCGGTGGTGAG+TGG 0.436352 tig0024822:-54933 Msa1420540:CDS
TCACCGCTTGAGCGCTGTGT+AGG 0.436687 tig0024822:+55102 None:intergenic
GCGAGCAAATTCGTATGTTA+GGG 0.437494 tig0024822:-53648 Msa1420540:CDS
GATGAACCCGGTCCACAATC+AGG 0.439006 tig0024822:+54966 None:intergenic
TGGCGGTGGTGAGTGGGTTG+AGG 0.460203 tig0024822:-54926 Msa1420540:CDS
CAAAATGGTGGCTGCTGTGA+AGG 0.468469 tig0024822:-53468 Msa1420540:three_prime_UTR
TGCGGTTGGAGTCGCTTGAC+CGG 0.475517 tig0024822:-55013 Msa1420540:CDS
AGCCGGAGTTTGCCTGATTG+TGG 0.475796 tig0024822:-54978 Msa1420540:CDS
GAAGGAGCTTCGTTCTGCTA+TGG 0.477536 tig0024822:-55081 Msa1420540:CDS
GGTTTGCGCCGGTGCGGTGG+AGG 0.478958 tig0024822:+55226 None:intergenic
TCCGGCTCGCTTCGTTAGAC+CGG 0.489876 tig0024822:+54994 None:intergenic
AGTATAAAGAGACGGTGAAA+CGG 0.492429 tig0024822:-54845 Msa1420540:CDS
CACGGTTGGCGGTGGTGAGT+GGG 0.493974 tig0024822:-54932 Msa1420540:CDS
CACCGCTTGAGCGCTGTGTA+GGG 0.497930 tig0024822:+55103 None:intergenic
AGTTTGCCTGATTGTGGACC+GGG 0.499061 tig0024822:-54972 Msa1420540:CDS
TAGGGTTTGCGCCGGTGCGG+TGG 0.506685 tig0024822:+55223 None:intergenic
TGTCATTCAATTCTTCACCT+TGG 0.506888 tig0024822:+53687 None:intergenic
ATGTACATCAAACAGTAGTA+AGG 0.507905 tig0024822:+53263 None:intergenic
TTCGGATCGAACACGGTTGG+CGG 0.516136 tig0024822:-54943 Msa1420540:CDS
CTTTGCTGTTAATGGAGAGA+AGG 0.520933 tig0024822:-54817 Msa1420540:CDS
GCAAGGGAGAGCAACAGTGA+TGG 0.529764 tig0024822:-53816 Msa1420540:CDS
ACACAGCGCTCAAGCGGTGA+AGG 0.532522 tig0024822:-55099 Msa1420540:CDS
TCATCAAGTGTTTCTGGACA+TGG 0.537223 tig0024822:-53726 Msa1420540:CDS
ATCAAACATTAATCAAAACT+TGG 0.539557 tig0024822:-53431 Msa1420540:three_prime_UTR
GGATCGAACACGGTTGGCGG+TGG 0.540587 tig0024822:-54940 Msa1420540:CDS
GTTGACCTCCTCATCTCTAC+TGG 0.541903 tig0024822:-54780 Msa1420540:intron
TTAATTAGTTCTCAAAATGG+TGG 0.543135 tig0024822:-53480 Msa1420540:three_prime_UTR
GGCGGGAACCTCCACCGCAC+CGG 0.544215 tig0024822:-55234 Msa1420540:CDS
ATCTTCGGATCGAACACGGT+TGG 0.547585 tig0024822:-54946 Msa1420540:CDS
CACCACATCATCCAGATGGC+GGG 0.553836 tig0024822:-55251 Msa1420540:CDS
GTCCACAATCAGGCAAACTC+CGG 0.555904 tig0024822:+54976 None:intergenic
AACCCTACACAGCGCTCAAG+CGG 0.557100 tig0024822:-55105 Msa1420540:CDS
TACAACAATTACATGTTGCT+AGG 0.558042 tig0024822:-53619 Msa1420540:CDS
ACCGGTCTAACGAAGCGAGC+CGG 0.561733 tig0024822:-54995 Msa1420540:CDS
AAGATTCATTAAGGTGCGGT+TGG 0.569901 tig0024822:-55027 Msa1420540:CDS
CAGAAAGCCATCCAAGAGCA+AGG 0.580650 tig0024822:-53833 Msa1420540:CDS
TGTATAAAGATGAATATGAA+AGG 0.583157 tig0024822:+53348 None:intergenic
GTTCGATCCGAAGATGAACC+CGG 0.588540 tig0024822:+54954 None:intergenic
CCATCTGGATGATGTGGTGG+TGG 0.591631 tig0024822:+55255 None:intergenic
GTTCATCTTCGGATCGAACA+CGG 0.592605 tig0024822:-54950 Msa1420540:CDS
TTCTAGGGTTTGCGCCGGTG+CGG 0.607568 tig0024822:+55220 None:intergenic
CCGCCATCTGGATGATGTGG+TGG 0.620414 tig0024822:+55252 None:intergenic
GAATACCAGTAGAGATGAGG+AGG 0.622119 tig0024822:+54775 None:intergenic
TTCCCGCCATCTGGATGATG+TGG 0.622342 tig0024822:+55249 None:intergenic
CTTCAGAGAGATAGTAACGT+CGG 0.627845 tig0024822:+55055 None:intergenic
CAAGAGATTGAAGAGAGACA+TGG 0.631024 tig0024822:-53785 Msa1420540:CDS
TATGAATACCAGTAGAGATG+AGG 0.631967 tig0024822:+54772 None:intergenic
ATGCTAGTACAATATAGTGA+AGG 0.633779 tig0024822:+53380 None:intergenic
CCACCACCACATCATCCAGA+TGG 0.634703 tig0024822:-55255 Msa1420540:CDS
AGTAGAGATGAGGAGGTCAA+CGG 0.635845 tig0024822:+54782 None:intergenic
AGAAAGCCATCCAAGAGCAA+GGG 0.638028 tig0024822:-53832 Msa1420540:CDS
GTACAATATAGTGAAGGCGG+CGG 0.639525 tig0024822:+53386 None:intergenic
GTGGTGGTGGTTGTTATCGA+CGG 0.640688 tig0024822:+55268 None:intergenic
CCACCACATCATCCAGATGG+CGG 0.642903 tig0024822:-55252 Msa1420540:CDS
AAGCAAGATTCATTAAGGTG+CGG 0.653735 tig0024822:-55031 Msa1420540:CDS
GCAAATTCGTATGTTAGGGG+AGG 0.655353 tig0024822:-53644 Msa1420540:CDS
TCAAACACTCAAAACGCGAA+CGG 0.662229 tig0024822:-55324 Msa1420540:five_prime_UTR
ATCGTCGGAGTATAAAGAGA+CGG 0.662950 tig0024822:-54853 Msa1420540:CDS
CTAGTACAATATAGTGAAGG+CGG 0.665769 tig0024822:+53383 None:intergenic
ACTAAGGGAGCAGATATCGT+CGG 0.671880 tig0024822:-54868 Msa1420540:CDS
CGAGCAAATTCGTATGTTAG+GGG 0.697718 tig0024822:-53647 Msa1420540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAATAGAAAAACAATA+CGG + tig0024822:54623-54642 None:intergenic 10.0%
!!! TGTTTTAAAAAATAATTAGT+TGG - tig0024822:55062-55081 Msa1420540:CDS 10.0%
!!! GTTTTAAAAAATAATTAGTT+GGG - tig0024822:55063-55082 Msa1420540:CDS 10.0%
!!! TTTTTATTTTATATTAGTTG+TGG - tig0024822:55266-55285 Msa1420540:CDS 10.0%
!! ATATAAATAGAAAAACAATA+CGG + tig0024822:54623-54642 None:intergenic 10.0%
!!! TGTTTTAAAAAATAATTAGT+TGG - tig0024822:55062-55081 Msa1420540:CDS 10.0%
!!! GTTTTAAAAAATAATTAGTT+GGG - tig0024822:55063-55082 Msa1420540:CDS 10.0%
!!! TTTTTATTTTATATTAGTTG+TGG - tig0024822:55266-55285 Msa1420540:CDS 10.0%
!! TGAAATACTAAAATTAACTT+TGG - tig0024822:53897-53916 Msa1420540:intron 15.0%
!!! TTTTGTATATACAAAGTTTT+AGG + tig0024822:54337-54356 None:intergenic 15.0%
!!! TATTTAACTTCTTCTTTTTA+GGG + tig0024822:54507-54526 None:intergenic 15.0%
!!! TTATTTAACTTCTTCTTTTT+AGG + tig0024822:54508-54527 None:intergenic 15.0%
!! AATAATTAGGAATAGTAAAA+TGG + tig0024822:55019-55038 None:intergenic 15.0%
!!! TAATTAATTAGTTCTCAAAA+TGG - tig0024822:55092-55111 Msa1420540:CDS 15.0%
!! TGAAATACTAAAATTAACTT+TGG - tig0024822:53897-53916 Msa1420540:intron 15.0%
!!! TTTTGTATATACAAAGTTTT+AGG + tig0024822:54337-54356 None:intergenic 15.0%
!!! TATTTAACTTCTTCTTTTTA+GGG + tig0024822:54507-54526 None:intergenic 15.0%
!!! TTATTTAACTTCTTCTTTTT+AGG + tig0024822:54508-54527 None:intergenic 15.0%
!! AATAATTAGGAATAGTAAAA+TGG + tig0024822:55019-55038 None:intergenic 15.0%
!!! TAATTAATTAGTTCTCAAAA+TGG - tig0024822:55092-55111 Msa1420540:CDS 15.0%
!! ATCTTCATAATTAATTGAGT+TGG - tig0024822:53961-53980 Msa1420540:intron 20.0%
!!! TTGCTACTTATTGTTAATAT+TGG - tig0024822:54068-54087 Msa1420540:intron 20.0%
!! TTATATTTAGTTGTTCCTTA+CGG - tig0024822:54374-54393 Msa1420540:intron 20.0%
!!! TAGTGTTTTAATATCATGTA+CGG + tig0024822:54421-54440 None:intergenic 20.0%
!! TCATCTCTTAAAAGTTAAAT+AGG - tig0024822:54478-54497 Msa1420540:intron 20.0%
!!! ATTTAACTTCTTCTTTTTAG+GGG + tig0024822:54506-54525 None:intergenic 20.0%
!! AAGTTGTATTAATACTATGA+TGG - tig0024822:54691-54710 Msa1420540:intron 20.0%
!! TTATAACCAAAGCAATAATT+AGG + tig0024822:55032-55051 None:intergenic 20.0%
!!! TATTTTTTAAAACAATAGGG+AGG + tig0024822:55056-55075 None:intergenic 20.0%
!! ATCAAACATTAATCAAAACT+TGG - tig0024822:55144-55163 Msa1420540:CDS 20.0%
!! TGTATAAAGATGAATATGAA+AGG + tig0024822:55230-55249 None:intergenic 20.0%
!! ATCTTCATAATTAATTGAGT+TGG - tig0024822:53961-53980 Msa1420540:intron 20.0%
!!! TTGCTACTTATTGTTAATAT+TGG - tig0024822:54068-54087 Msa1420540:intron 20.0%
!! TTATATTTAGTTGTTCCTTA+CGG - tig0024822:54374-54393 Msa1420540:intron 20.0%
!!! TAGTGTTTTAATATCATGTA+CGG + tig0024822:54421-54440 None:intergenic 20.0%
!! TCATCTCTTAAAAGTTAAAT+AGG - tig0024822:54478-54497 Msa1420540:intron 20.0%
!!! ATTTAACTTCTTCTTTTTAG+GGG + tig0024822:54506-54525 None:intergenic 20.0%
!! AAGTTGTATTAATACTATGA+TGG - tig0024822:54691-54710 Msa1420540:intron 20.0%
!! TTATAACCAAAGCAATAATT+AGG + tig0024822:55032-55051 None:intergenic 20.0%
!!! TATTTTTTAAAACAATAGGG+AGG + tig0024822:55056-55075 None:intergenic 20.0%
!! ATCAAACATTAATCAAAACT+TGG - tig0024822:55144-55163 Msa1420540:CDS 20.0%
!! TGTATAAAGATGAATATGAA+AGG + tig0024822:55230-55249 None:intergenic 20.0%
!! TTCTTGGAAGAATTTTTCTA+GGG + tig0024822:53373-53392 None:intergenic 25.0%
! GAAGAATTTGAAAGATTCAA+TGG - tig0024822:53671-53690 Msa1420540:CDS 25.0%
!!! AATTAATTGAGTTGGAATCT+AGG - tig0024822:53969-53988 Msa1420540:intron 25.0%
!!! ATTAATTGAGTTGGAATCTA+GGG - tig0024822:53970-53989 Msa1420540:intron 25.0%
!!! TAGTTTTTTTTTCTTTGCCA+GGG + tig0024822:54045-54064 None:intergenic 25.0%
!!! TTAGTTTTTTTTTCTTTGCC+AGG + tig0024822:54046-54065 None:intergenic 25.0%
!!! ATATACAAAGTTTTAGGTCA+AGG + tig0024822:54331-54350 None:intergenic 25.0%
! TTGTTTGCTTATTACGTTAA+TGG - tig0024822:54559-54578 Msa1420540:intron 25.0%
! TTGTATTAATACTATGATGG+TGG - tig0024822:54694-54713 Msa1420540:intron 25.0%
! ACTATTCCTAATTATTGCTT+TGG - tig0024822:55023-55042 Msa1420540:CDS 25.0%
!! TTAATTAGTTCTCAAAATGG+TGG - tig0024822:55095-55114 Msa1420540:CDS 25.0%
!! TTCTTGGAAGAATTTTTCTA+GGG + tig0024822:53373-53392 None:intergenic 25.0%
! GAAGAATTTGAAAGATTCAA+TGG - tig0024822:53671-53690 Msa1420540:CDS 25.0%
!!! AATTAATTGAGTTGGAATCT+AGG - tig0024822:53969-53988 Msa1420540:intron 25.0%
!!! ATTAATTGAGTTGGAATCTA+GGG - tig0024822:53970-53989 Msa1420540:intron 25.0%
!!! TAGTTTTTTTTTCTTTGCCA+GGG + tig0024822:54045-54064 None:intergenic 25.0%
!!! TTAGTTTTTTTTTCTTTGCC+AGG + tig0024822:54046-54065 None:intergenic 25.0%
!!! ATATACAAAGTTTTAGGTCA+AGG + tig0024822:54331-54350 None:intergenic 25.0%
! TTGTTTGCTTATTACGTTAA+TGG - tig0024822:54559-54578 Msa1420540:intron 25.0%
! TTGTATTAATACTATGATGG+TGG - tig0024822:54694-54713 Msa1420540:intron 25.0%
! ACTATTCCTAATTATTGCTT+TGG - tig0024822:55023-55042 Msa1420540:CDS 25.0%
!! TTAATTAGTTCTCAAAATGG+TGG - tig0024822:55095-55114 Msa1420540:CDS 25.0%
! CTTCTTGGAAGAATTTTTCT+AGG + tig0024822:53374-53393 None:intergenic 30.0%
AGAAAAATTCTTCCAAGAAG+TGG - tig0024822:53374-53393 Msa1420540:three_prime_UTR 30.0%
GAAGAAAGCAAGATTCATTA+AGG - tig0024822:53539-53558 Msa1420540:CDS 30.0%
!! GATTCAATGGAGAGTTTTAA+TGG - tig0024822:53684-53703 Msa1420540:CDS 30.0%
TCTACTAGAAATCCAACATA+TGG + tig0024822:54153-54172 None:intergenic 30.0%
!! ATATGTTGGATTTCTAGTAG+AGG - tig0024822:54152-54171 Msa1420540:intron 30.0%
AAACAATACGGTGATTGTTA+CGG + tig0024822:54611-54630 None:intergenic 30.0%
AGAAAAGAGAAATTACGTAG+AGG + tig0024822:54656-54675 None:intergenic 30.0%
AATACAACTTTCCATGCATT+AGG + tig0024822:54681-54700 None:intergenic 30.0%
TACAACAATTACATGTTGCT+AGG - tig0024822:54956-54975 Msa1420540:CDS 30.0%
ATCAAAAGAATACCCGTAAA+TGG - tig0024822:54983-55002 Msa1420540:CDS 30.0%
ATGCTAGTACAATATAGTGA+AGG + tig0024822:55198-55217 None:intergenic 30.0%
ATGTACATCAAACAGTAGTA+AGG + tig0024822:55315-55334 None:intergenic 30.0%
! CTTCTTGGAAGAATTTTTCT+AGG + tig0024822:53374-53393 None:intergenic 30.0%
AGAAAAATTCTTCCAAGAAG+TGG - tig0024822:53374-53393 Msa1420540:three_prime_UTR 30.0%
GAAGAAAGCAAGATTCATTA+AGG - tig0024822:53539-53558 Msa1420540:CDS 30.0%
!! GATTCAATGGAGAGTTTTAA+TGG - tig0024822:53684-53703 Msa1420540:CDS 30.0%
TCTACTAGAAATCCAACATA+TGG + tig0024822:54153-54172 None:intergenic 30.0%
!! ATATGTTGGATTTCTAGTAG+AGG - tig0024822:54152-54171 Msa1420540:intron 30.0%
AAACAATACGGTGATTGTTA+CGG + tig0024822:54611-54630 None:intergenic 30.0%
AGAAAAGAGAAATTACGTAG+AGG + tig0024822:54656-54675 None:intergenic 30.0%
AATACAACTTTCCATGCATT+AGG + tig0024822:54681-54700 None:intergenic 30.0%
TACAACAATTACATGTTGCT+AGG - tig0024822:54956-54975 Msa1420540:CDS 30.0%
ATCAAAAGAATACCCGTAAA+TGG - tig0024822:54983-55002 Msa1420540:CDS 30.0%
ATGCTAGTACAATATAGTGA+AGG + tig0024822:55198-55217 None:intergenic 30.0%
ATGTACATCAAACAGTAGTA+AGG + tig0024822:55315-55334 None:intergenic 30.0%
! TCTTTTCGTGTGAGTTTTTG+AGG + tig0024822:53446-53465 None:intergenic 35.0%
AAGCAAGATTCATTAAGGTG+CGG - tig0024822:53544-53563 Msa1420540:CDS 35.0%
!!! TGGAGAGTTTTAATGGACTA+AGG - tig0024822:53691-53710 Msa1420540:CDS 35.0%
!!! GGAGAGTTTTAATGGACTAA+GGG - tig0024822:53692-53711 Msa1420540:CDS 35.0%
AGTATAAAGAGACGGTGAAA+CGG - tig0024822:53730-53749 Msa1420540:CDS 35.0%
TATGAATACCAGTAGAGATG+AGG + tig0024822:53806-53825 None:intergenic 35.0%
!! TATGGCTAGCTTGGTTAATT+TGG + tig0024822:54135-54154 None:intergenic 35.0%
TTTAGTTGTTCCTTACGGTT+AGG - tig0024822:54379-54398 Msa1420540:intron 35.0%
TTAGTTGTTCCTTACGGTTA+GGG - tig0024822:54380-54399 Msa1420540:intron 35.0%
! CTCTTTTCTTACCTAATGCA+TGG - tig0024822:54667-54686 Msa1420540:intron 35.0%
!! TAATACTATGATGGTGGATC+AGG - tig0024822:54700-54719 Msa1420540:intron 35.0%
GTCATTCAATTCTTCACCTT+GGG + tig0024822:54890-54909 None:intergenic 35.0%
TGTCATTCAATTCTTCACCT+TGG + tig0024822:54891-54910 None:intergenic 35.0%
TGGCAAAACATGTCCATTTA+CGG + tig0024822:54999-55018 None:intergenic 35.0%
CTAGTACAATATAGTGAAGG+CGG + tig0024822:55195-55214 None:intergenic 35.0%
! TCTTTTCGTGTGAGTTTTTG+AGG + tig0024822:53446-53465 None:intergenic 35.0%
AAGCAAGATTCATTAAGGTG+CGG - tig0024822:53544-53563 Msa1420540:CDS 35.0%
!!! TGGAGAGTTTTAATGGACTA+AGG - tig0024822:53691-53710 Msa1420540:CDS 35.0%
!!! GGAGAGTTTTAATGGACTAA+GGG - tig0024822:53692-53711 Msa1420540:CDS 35.0%
AGTATAAAGAGACGGTGAAA+CGG - tig0024822:53730-53749 Msa1420540:CDS 35.0%
TATGAATACCAGTAGAGATG+AGG + tig0024822:53806-53825 None:intergenic 35.0%
!! TATGGCTAGCTTGGTTAATT+TGG + tig0024822:54135-54154 None:intergenic 35.0%
TTTAGTTGTTCCTTACGGTT+AGG - tig0024822:54379-54398 Msa1420540:intron 35.0%
TTAGTTGTTCCTTACGGTTA+GGG - tig0024822:54380-54399 Msa1420540:intron 35.0%
! CTCTTTTCTTACCTAATGCA+TGG - tig0024822:54667-54686 Msa1420540:intron 35.0%
!! TAATACTATGATGGTGGATC+AGG - tig0024822:54700-54719 Msa1420540:intron 35.0%
GTCATTCAATTCTTCACCTT+GGG + tig0024822:54890-54909 None:intergenic 35.0%
TGTCATTCAATTCTTCACCT+TGG + tig0024822:54891-54910 None:intergenic 35.0%
TGGCAAAACATGTCCATTTA+CGG + tig0024822:54999-55018 None:intergenic 35.0%
CTAGTACAATATAGTGAAGG+CGG + tig0024822:55195-55214 None:intergenic 35.0%
!!! AATTTTTCTAGGGTTTGCGC+CGG + tig0024822:53363-53382 None:intergenic 40.0%
CTTCAGAGAGATAGTAACGT+CGG + tig0024822:53523-53542 None:intergenic 40.0%
AAGATTCATTAAGGTGCGGT+TGG - tig0024822:53548-53567 Msa1420540:CDS 40.0%
ATCGTCGGAGTATAAAGAGA+CGG - tig0024822:53722-53741 Msa1420540:CDS 40.0%
!! CGGAGATACTTTGCTGTTAA+TGG - tig0024822:53750-53769 Msa1420540:CDS 40.0%
!! CTTTGCTGTTAATGGAGAGA+AGG - tig0024822:53758-53777 Msa1420540:CDS 40.0%
GATGATCAAACGTTAAACCC+TGG - tig0024822:54025-54044 Msa1420540:intron 40.0%
TAACCAAGCTAGCCATATGT+TGG - tig0024822:54138-54157 Msa1420540:intron 40.0%
! AATCCAACATATGGCTAGCT+TGG + tig0024822:54144-54163 None:intergenic 40.0%
ACAACAACAATTCAACCGTG+TGG + tig0024822:54264-54283 None:intergenic 40.0%
CAAGAGATTGAAGAGAGACA+TGG - tig0024822:54790-54809 Msa1420540:CDS 40.0%
AGAGCTTCATCAAGTGTTTC+TGG - tig0024822:54843-54862 Msa1420540:CDS 40.0%
!! TCATCAAGTGTTTCTGGACA+TGG - tig0024822:54849-54868 Msa1420540:CDS 40.0%
! ACGAATTTGCTCGCATCATT+TGG + tig0024822:54921-54940 None:intergenic 40.0%
TGCGAGCAAATTCGTATGTT+AGG - tig0024822:54926-54945 Msa1420540:CDS 40.0%
GCGAGCAAATTCGTATGTTA+GGG - tig0024822:54927-54946 Msa1420540:CDS 40.0%
CGAGCAAATTCGTATGTTAG+GGG - tig0024822:54928-54947 Msa1420540:CDS 40.0%
GGCAAAACATGTCCATTTAC+GGG + tig0024822:54998-55017 None:intergenic 40.0%
!!! AATTTTTCTAGGGTTTGCGC+CGG + tig0024822:53363-53382 None:intergenic 40.0%
CTTCAGAGAGATAGTAACGT+CGG + tig0024822:53523-53542 None:intergenic 40.0%
AAGATTCATTAAGGTGCGGT+TGG - tig0024822:53548-53567 Msa1420540:CDS 40.0%
ATCGTCGGAGTATAAAGAGA+CGG - tig0024822:53722-53741 Msa1420540:CDS 40.0%
!! CGGAGATACTTTGCTGTTAA+TGG - tig0024822:53750-53769 Msa1420540:CDS 40.0%
!! CTTTGCTGTTAATGGAGAGA+AGG - tig0024822:53758-53777 Msa1420540:CDS 40.0%
GATGATCAAACGTTAAACCC+TGG - tig0024822:54025-54044 Msa1420540:intron 40.0%
TAACCAAGCTAGCCATATGT+TGG - tig0024822:54138-54157 Msa1420540:intron 40.0%
! AATCCAACATATGGCTAGCT+TGG + tig0024822:54144-54163 None:intergenic 40.0%
ACAACAACAATTCAACCGTG+TGG + tig0024822:54264-54283 None:intergenic 40.0%
CAAGAGATTGAAGAGAGACA+TGG - tig0024822:54790-54809 Msa1420540:CDS 40.0%
AGAGCTTCATCAAGTGTTTC+TGG - tig0024822:54843-54862 Msa1420540:CDS 40.0%
!! TCATCAAGTGTTTCTGGACA+TGG - tig0024822:54849-54868 Msa1420540:CDS 40.0%
! ACGAATTTGCTCGCATCATT+TGG + tig0024822:54921-54940 None:intergenic 40.0%
TGCGAGCAAATTCGTATGTT+AGG - tig0024822:54926-54945 Msa1420540:CDS 40.0%
GCGAGCAAATTCGTATGTTA+GGG - tig0024822:54927-54946 Msa1420540:CDS 40.0%
CGAGCAAATTCGTATGTTAG+GGG - tig0024822:54928-54947 Msa1420540:CDS 40.0%
GGCAAAACATGTCCATTTAC+GGG + tig0024822:54998-55017 None:intergenic 40.0%
! CTTTTAGCGACTCCACTTCT+TGG + tig0024822:53389-53408 None:intergenic 45.0%
!!! AGTTTTTGAGGCTTGTGTGG+AGG + tig0024822:53434-53453 None:intergenic 45.0%
!!! GTGAGTTTTTGAGGCTTGTG+TGG + tig0024822:53437-53456 None:intergenic 45.0%
GTTCATCTTCGGATCGAACA+CGG - tig0024822:53625-53644 Msa1420540:CDS 45.0%
ACTAAGGGAGCAGATATCGT+CGG - tig0024822:53707-53726 Msa1420540:CDS 45.0%
AGTAGAGATGAGGAGGTCAA+CGG + tig0024822:53796-53815 None:intergenic 45.0%
GAATACCAGTAGAGATGAGG+AGG + tig0024822:53803-53822 None:intergenic 45.0%
GTTGCTAGCTACAACAGTTG+TGG - tig0024822:54174-54193 Msa1420540:intron 45.0%
AGAAAGCCATCCAAGAGCAA+GGG - tig0024822:54743-54762 Msa1420540:intron 45.0%
!! GTTTCTGGACATGGCAGTTT+TGG - tig0024822:54858-54877 Msa1420540:CDS 45.0%
TCAATTCTTCACCTTGGGCT+TGG + tig0024822:54885-54904 None:intergenic 45.0%
GCAAATTCGTATGTTAGGGG+AGG - tig0024822:54931-54950 Msa1420540:CDS 45.0%
GTACAATATAGTGAAGGCGG+CGG + tig0024822:55192-55211 None:intergenic 45.0%
! CTTTTAGCGACTCCACTTCT+TGG + tig0024822:53389-53408 None:intergenic 45.0%
!!! AGTTTTTGAGGCTTGTGTGG+AGG + tig0024822:53434-53453 None:intergenic 45.0%
!!! GTGAGTTTTTGAGGCTTGTG+TGG + tig0024822:53437-53456 None:intergenic 45.0%
GTTCATCTTCGGATCGAACA+CGG - tig0024822:53625-53644 Msa1420540:CDS 45.0%
ACTAAGGGAGCAGATATCGT+CGG - tig0024822:53707-53726 Msa1420540:CDS 45.0%
AGTAGAGATGAGGAGGTCAA+CGG + tig0024822:53796-53815 None:intergenic 45.0%
GAATACCAGTAGAGATGAGG+AGG + tig0024822:53803-53822 None:intergenic 45.0%
GTTGCTAGCTACAACAGTTG+TGG - tig0024822:54174-54193 Msa1420540:intron 45.0%
AGAAAGCCATCCAAGAGCAA+GGG - tig0024822:54743-54762 Msa1420540:intron 45.0%
!! GTTTCTGGACATGGCAGTTT+TGG - tig0024822:54858-54877 Msa1420540:CDS 45.0%
TCAATTCTTCACCTTGGGCT+TGG + tig0024822:54885-54904 None:intergenic 45.0%
GCAAATTCGTATGTTAGGGG+AGG - tig0024822:54931-54950 Msa1420540:CDS 45.0%
GTACAATATAGTGAAGGCGG+CGG + tig0024822:55192-55211 None:intergenic 45.0%
!! ATAAAATAAAACTATAAAAT+TGG - tig0024822:53923-53942 Msa1420540:intron 5.0%
!!! AATTATTTTTTAAAACAATA+GGG + tig0024822:55059-55078 None:intergenic 5.0%
!!! TAATTATTTTTTAAAACAAT+AGG + tig0024822:55060-55079 None:intergenic 5.0%
!! ATAAAATAAAACTATAAAAT+TGG - tig0024822:53923-53942 Msa1420540:intron 5.0%
!!! AATTATTTTTTAAAACAATA+GGG + tig0024822:55059-55078 None:intergenic 5.0%
!!! TAATTATTTTTTAAAACAAT+AGG + tig0024822:55060-55079 None:intergenic 5.0%
!! GTGGTGGTGGTTGTTATCGA+CGG + tig0024822:53310-53329 None:intergenic 50.0%
GAAGGAGCTTCGTTCTGCTA+TGG - tig0024822:53494-53513 Msa1420540:three_prime_UTR 50.0%
GTCCACAATCAGGCAAACTC+CGG + tig0024822:53602-53621 None:intergenic 50.0%
GAGTTTGCCTGATTGTGGAC+CGG - tig0024822:53602-53621 Msa1420540:CDS 50.0%
AGTTTGCCTGATTGTGGACC+GGG - tig0024822:53603-53622 Msa1420540:CDS 50.0%
TTGTGGACCGGGTTCATCTT+CGG - tig0024822:53614-53633 Msa1420540:CDS 50.0%
GTTCGATCCGAAGATGAACC+CGG + tig0024822:53624-53643 None:intergenic 50.0%
ATCTTCGGATCGAACACGGT+TGG - tig0024822:53629-53648 Msa1420540:CDS 50.0%
GTTGACCTCCTCATCTCTAC+TGG - tig0024822:53795-53814 Msa1420540:CDS 50.0%
ACAATTCAACCGTGTGGCTG+AGG + tig0024822:54258-54277 None:intergenic 50.0%
GATGTCACACCCTAACCGTA+AGG + tig0024822:54392-54411 None:intergenic 50.0%
GGTTAGGGTGTGACATCATG+TGG - tig0024822:54395-54414 Msa1420540:intron 50.0%
CAGAAAGCCATCCAAGAGCA+AGG - tig0024822:54742-54761 Msa1420540:intron 50.0%
CAAAATGGTGGCTGCTGTGA+AGG - tig0024822:55107-55126 Msa1420540:CDS 50.0%
!! GTGGTGGTGGTTGTTATCGA+CGG + tig0024822:53310-53329 None:intergenic 50.0%
GAAGGAGCTTCGTTCTGCTA+TGG - tig0024822:53494-53513 Msa1420540:three_prime_UTR 50.0%
GTCCACAATCAGGCAAACTC+CGG + tig0024822:53602-53621 None:intergenic 50.0%
GAGTTTGCCTGATTGTGGAC+CGG - tig0024822:53602-53621 Msa1420540:CDS 50.0%
AGTTTGCCTGATTGTGGACC+GGG - tig0024822:53603-53622 Msa1420540:CDS 50.0%
TTGTGGACCGGGTTCATCTT+CGG - tig0024822:53614-53633 Msa1420540:CDS 50.0%
GTTCGATCCGAAGATGAACC+CGG + tig0024822:53624-53643 None:intergenic 50.0%
ATCTTCGGATCGAACACGGT+TGG - tig0024822:53629-53648 Msa1420540:CDS 50.0%
GTTGACCTCCTCATCTCTAC+TGG - tig0024822:53795-53814 Msa1420540:CDS 50.0%
ACAATTCAACCGTGTGGCTG+AGG + tig0024822:54258-54277 None:intergenic 50.0%
GATGTCACACCCTAACCGTA+AGG + tig0024822:54392-54411 None:intergenic 50.0%
GGTTAGGGTGTGACATCATG+TGG - tig0024822:54395-54414 Msa1420540:intron 50.0%
CAGAAAGCCATCCAAGAGCA+AGG - tig0024822:54742-54761 Msa1420540:intron 50.0%
CAAAATGGTGGCTGCTGTGA+AGG - tig0024822:55107-55126 Msa1420540:CDS 50.0%
CCATCTGGATGATGTGGTGG+TGG + tig0024822:53323-53342 None:intergenic 55.0%
CCACCACCACATCATCCAGA+TGG - tig0024822:53320-53339 Msa1420540:three_prime_UTR 55.0%
CCACCACATCATCCAGATGG+CGG - tig0024822:53323-53342 Msa1420540:three_prime_UTR 55.0%
CACCACATCATCCAGATGGC+GGG - tig0024822:53324-53343 Msa1420540:three_prime_UTR 55.0%
TTCCCGCCATCTGGATGATG+TGG + tig0024822:53329-53348 None:intergenic 55.0%
AACCCTACACAGCGCTCAAG+CGG - tig0024822:53470-53489 Msa1420540:three_prime_UTR 55.0%
AGCCGGAGTTTGCCTGATTG+TGG - tig0024822:53597-53616 Msa1420540:CDS 55.0%
GATGAACCCGGTCCACAATC+AGG + tig0024822:53612-53631 None:intergenic 55.0%
TTCGGATCGAACACGGTTGG+CGG - tig0024822:53632-53651 Msa1420540:CDS 55.0%
TGCTCTCCCTTGCTCTTGGA+TGG + tig0024822:54752-54771 None:intergenic 55.0%
CTGTTGCTCTCCCTTGCTCT+TGG + tig0024822:54756-54775 None:intergenic 55.0%
GCAAGGGAGAGCAACAGTGA+TGG - tig0024822:54759-54778 Msa1420540:intron 55.0%
!! GCAGTTTTGGTCCAAGCCCA+AGG - tig0024822:54871-54890 Msa1420540:CDS 55.0%
CCATCTGGATGATGTGGTGG+TGG + tig0024822:53323-53342 None:intergenic 55.0%
CCACCACCACATCATCCAGA+TGG - tig0024822:53320-53339 Msa1420540:three_prime_UTR 55.0%
CCACCACATCATCCAGATGG+CGG - tig0024822:53323-53342 Msa1420540:three_prime_UTR 55.0%
CACCACATCATCCAGATGGC+GGG - tig0024822:53324-53343 Msa1420540:three_prime_UTR 55.0%
TTCCCGCCATCTGGATGATG+TGG + tig0024822:53329-53348 None:intergenic 55.0%
AACCCTACACAGCGCTCAAG+CGG - tig0024822:53470-53489 Msa1420540:three_prime_UTR 55.0%
AGCCGGAGTTTGCCTGATTG+TGG - tig0024822:53597-53616 Msa1420540:CDS 55.0%
GATGAACCCGGTCCACAATC+AGG + tig0024822:53612-53631 None:intergenic 55.0%
TTCGGATCGAACACGGTTGG+CGG - tig0024822:53632-53651 Msa1420540:CDS 55.0%
TGCTCTCCCTTGCTCTTGGA+TGG + tig0024822:54752-54771 None:intergenic 55.0%
CTGTTGCTCTCCCTTGCTCT+TGG + tig0024822:54756-54775 None:intergenic 55.0%
GCAAGGGAGAGCAACAGTGA+TGG - tig0024822:54759-54778 Msa1420540:intron 55.0%
!! GCAGTTTTGGTCCAAGCCCA+AGG - tig0024822:54871-54890 Msa1420540:CDS 55.0%
CCGCCATCTGGATGATGTGG+TGG + tig0024822:53326-53345 None:intergenic 60.0%
!! TTCTAGGGTTTGCGCCGGTG+CGG + tig0024822:53358-53377 None:intergenic 60.0%
! CACCGCTTGAGCGCTGTGTA+GGG + tig0024822:53475-53494 None:intergenic 60.0%
! TCACCGCTTGAGCGCTGTGT+AGG + tig0024822:53476-53495 None:intergenic 60.0%
ACACAGCGCTCAAGCGGTGA+AGG - tig0024822:53476-53495 Msa1420540:three_prime_UTR 60.0%
TGCGGTTGGAGTCGCTTGAC+CGG - tig0024822:53562-53581 Msa1420540:CDS 60.0%
ACCGGTCTAACGAAGCGAGC+CGG - tig0024822:53580-53599 Msa1420540:CDS 60.0%
! TCCGGCTCGCTTCGTTAGAC+CGG + tig0024822:53584-53603 None:intergenic 60.0%
CCGCCATCTGGATGATGTGG+TGG + tig0024822:53326-53345 None:intergenic 60.0%
!! TTCTAGGGTTTGCGCCGGTG+CGG + tig0024822:53358-53377 None:intergenic 60.0%
! CACCGCTTGAGCGCTGTGTA+GGG + tig0024822:53475-53494 None:intergenic 60.0%
! TCACCGCTTGAGCGCTGTGT+AGG + tig0024822:53476-53495 None:intergenic 60.0%
ACACAGCGCTCAAGCGGTGA+AGG - tig0024822:53476-53495 Msa1420540:three_prime_UTR 60.0%
TGCGGTTGGAGTCGCTTGAC+CGG - tig0024822:53562-53581 Msa1420540:CDS 60.0%
ACCGGTCTAACGAAGCGAGC+CGG - tig0024822:53580-53599 Msa1420540:CDS 60.0%
! TCCGGCTCGCTTCGTTAGAC+CGG + tig0024822:53584-53603 None:intergenic 60.0%
GGATCGAACACGGTTGGCGG+TGG - tig0024822:53635-53654 Msa1420540:CDS 65.0%
ACACGGTTGGCGGTGGTGAG+TGG - tig0024822:53642-53661 Msa1420540:CDS 65.0%
CACGGTTGGCGGTGGTGAGT+GGG - tig0024822:53643-53662 Msa1420540:CDS 65.0%
!! TGGCGGTGGTGAGTGGGTTG+AGG - tig0024822:53649-53668 Msa1420540:CDS 65.0%
GTGGCGCAGCATCGCGATCT+TGG - tig0024822:54193-54212 Msa1420540:intron 65.0%
GGATCGAACACGGTTGGCGG+TGG - tig0024822:53635-53654 Msa1420540:CDS 65.0%
ACACGGTTGGCGGTGGTGAG+TGG - tig0024822:53642-53661 Msa1420540:CDS 65.0%
CACGGTTGGCGGTGGTGAGT+GGG - tig0024822:53643-53662 Msa1420540:CDS 65.0%
!! TGGCGGTGGTGAGTGGGTTG+AGG - tig0024822:53649-53668 Msa1420540:CDS 65.0%
GTGGCGCAGCATCGCGATCT+TGG - tig0024822:54193-54212 Msa1420540:intron 65.0%
CGGTGGAGGTTCCCGCCATC+TGG + tig0024822:53338-53357 None:intergenic 70.0%
! TAGGGTTTGCGCCGGTGCGG+TGG + tig0024822:53355-53374 None:intergenic 70.0%
CCGTGTGGCTGAGGCTGCGT+CGG + tig0024822:54249-54268 None:intergenic 70.0%
CCGACGCAGCCTCAGCCACA+CGG - tig0024822:54246-54265 Msa1420540:intron 70.0%
CGGTGGAGGTTCCCGCCATC+TGG + tig0024822:53338-53357 None:intergenic 70.0%
! TAGGGTTTGCGCCGGTGCGG+TGG + tig0024822:53355-53374 None:intergenic 70.0%
CCGTGTGGCTGAGGCTGCGT+CGG + tig0024822:54249-54268 None:intergenic 70.0%
CCGACGCAGCCTCAGCCACA+CGG - tig0024822:54246-54265 Msa1420540:intron 70.0%
GGCGGGAACCTCCACCGCAC+CGG - tig0024822:53341-53360 Msa1420540:three_prime_UTR 75.0%
! GGTTTGCGCCGGTGCGGTGG+AGG + tig0024822:53352-53371 None:intergenic 75.0%
GGCGGGAACCTCCACCGCAC+CGG - tig0024822:53341-53360 Msa1420540:three_prime_UTR 75.0%
! GGTTTGCGCCGGTGCGGTGG+AGG + tig0024822:53352-53371 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0024822 gene 53252 55345 53252 ID=Msa1420540;Name=Msa1420540
tig0024822 mRNA 53252 55345 53252 ID=Msa1420540-mRNA-1;Parent=Msa1420540;Name=Msa1420540-mRNA-1;_AED=0.01;_eAED=0.01;_QI=39|1|1|1|1|1|2|265|294
tig0024822 exon 53252 53875 53252 ID=Msa1420540-mRNA-1:exon:1546;Parent=Msa1420540-mRNA-1
tig0024822 exon 54781 55345 54781 ID=Msa1420540-mRNA-1:exon:1545;Parent=Msa1420540-mRNA-1
tig0024822 five_prime_UTR 55307 55345 55307 ID=Msa1420540-mRNA-1:five_prime_utr;Parent=Msa1420540-mRNA-1
tig0024822 CDS 54781 55306 54781 ID=Msa1420540-mRNA-1:cds;Parent=Msa1420540-mRNA-1
tig0024822 CDS 53517 53875 53517 ID=Msa1420540-mRNA-1:cds;Parent=Msa1420540-mRNA-1
tig0024822 three_prime_UTR 53252 53516 53252 ID=Msa1420540-mRNA-1:three_prime_utr;Parent=Msa1420540-mRNA-1
Gene Sequence

>Msa1420540

ATGAACGACTTACTCTCCGTCGATAACAACCACCACCACATCATCCAGATGGCGGGAACCTCCACCGCACCGGCGCAAACCCTAGAAAAATTCTTCCAAGAAGTGGAGTCGCTAAAAGAAGAACTAATAGAGTTAGAAAACCTCCACACAAGCCTCAAAAACTCACACGAAAAGAGCAAAACCCTACACAGCGCTCAAGCGGTGAAGGAGCTTCGTTCTGCTATGGATTCCGACGTTACTATCTCTCTGAAGAAAGCAAGATTCATTAAGGTGCGGTTGGAGTCGCTTGACCGGTCTAACGAAGCGAGCCGGAGTTTGCCTGATTGTGGACCGGGTTCATCTTCGGATCGAACACGGTTGGCGGTGGTGAGTGGGTTGAGGAAGAATTTGAAAGATTCAATGGAGAGTTTTAATGGACTAAGGGAGCAGATATCGTCGGAGTATAAAGAGACGGTGAAACGGAGATACTTTGCTGTTAATGGAGAGAAGGCTGATGATAAAACCGTTGACCTCCTCATCTCTACTGGTGAGAGCGAAACATTTTTACAGAAAGCCATCCAAGAGCAAGGGAGAGCAACAGTGATGGAGACAATACAAGAGATTGAAGAGAGACATGGTGCAGTGAAAGAGATAGAGAGAAATCTAAAAGAGCTTCATCAAGTGTTTCTGGACATGGCAGTTTTGGTCCAAGCCCAAGGTGAAGAATTGAATGACATTGAGAGCCAAATGATGCGAGCAAATTCGTATGTTAGGGGAGGAGTACAACAATTACATGTTGCTAGGAAACATCAAAAGAATACCCGTAAATGGACATGTTTTGCCATTTTACTATTCCTAATTATTGCTTTGGTTATAATCCTCCCTATTGTTTTAAAAAATAATTAG

Protein sequence

>Msa1420540

MNDLLSVDNNHHHIIQMAGTSTAPAQTLEKFFQEVESLKEELIELENLHTSLKNSHEKSKTLHSAQAVKELRSAMDSDVTISLKKARFIKVRLESLDRSNEASRSLPDCGPGSSSDRTRLAVVSGLRKNLKDSMESFNGLREQISSEYKETVKRRYFAVNGEKADDKTVDLLISTGESETFLQKAIQEQGRATVMETIQEIEERHGAVKEIERNLKELHQVFLDMAVLVQAQGEELNDIESQMMRANSYVRGGVQQLHVARKHQKNTRKWTCFAILLFLIIALVIILPIVLKNN*