Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216890 | XP_003609537.1 | 94.987 | 399 | 20 | 0 | 1 | 399 | 1 | 399 | 0.0 | 790 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216890 | sp|Q7XJ53|P2C35_ARATH | 68.012 | 347 | 109 | 1 | 1 | 345 | 1 | 347 | 4.13e-173 | 489 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027390 | Msa1216890 | 0.809355 | 1.971623e-50 | -8.615850e-47 |
| Msa0045790 | Msa1216890 | 0.836681 | 8.113925e-57 | -8.615850e-47 |
| Msa0046160 | Msa1216890 | 0.832420 | 9.548088e-56 | -8.615850e-47 |
| Msa0048000 | Msa1216890 | 0.811160 | 8.046041e-51 | -8.615850e-47 |
| Msa0077450 | Msa1216890 | 0.806089 | 9.743313e-50 | -8.615850e-47 |
| Msa0090100 | Msa1216890 | 0.801823 | 7.506369e-49 | -8.615850e-47 |
| Msa0607540 | Msa1216890 | 0.803049 | 4.197093e-49 | -8.615850e-47 |
| Msa0626280 | Msa1216890 | 0.829909 | 3.953479e-55 | -8.615850e-47 |
| Msa0657610 | Msa1216890 | 0.815755 | 7.856390e-52 | -8.615850e-47 |
| Msa0658570 | Msa1216890 | 0.831332 | 1.772309e-55 | -8.615850e-47 |
| Msa0682550 | Msa1216890 | 0.803797 | 2.936492e-49 | -8.615850e-47 |
| Msa0688070 | Msa1216890 | 0.809677 | 1.681096e-50 | -8.615850e-47 |
| Msa0693380 | Msa1216890 | 0.827823 | 1.264379e-54 | -8.615850e-47 |
| Msa0703490 | Msa1216890 | 0.830457 | 2.905557e-55 | -8.615850e-47 |
| Msa0723990 | Msa1216890 | 0.809784 | 1.594323e-50 | -8.615850e-47 |
| Msa0744040 | Msa1216890 | 0.803075 | 4.145009e-49 | -8.615850e-47 |
| Msa0757080 | Msa1216890 | 0.805921 | 1.056884e-49 | -8.615850e-47 |
| Msa0165300 | Msa1216890 | 0.811274 | 7.598413e-51 | -8.615850e-47 |
| Msa0165510 | Msa1216890 | 0.805406 | 1.355812e-49 | -8.615850e-47 |
| Msa0170140 | Msa1216890 | 0.824671 | 7.113753e-54 | -8.615850e-47 |
| Msa0197660 | Msa1216890 | 0.817475 | 3.235254e-52 | -8.615850e-47 |
| Msa0213040 | Msa1216890 | 0.804339 | 2.265147e-49 | -8.615850e-47 |
| Msa0220580 | Msa1216890 | 0.830378 | 3.038294e-55 | -8.615850e-47 |
| Msa0376590 | Msa1216890 | 0.813613 | 2.341934e-51 | -8.615850e-47 |
| Msa0379640 | Msa1216890 | 0.806148 | 9.467759e-50 | -8.615850e-47 |
| Msa0422500 | Msa1216890 | 0.804156 | 2.473318e-49 | -8.615850e-47 |
| Msa0436370 | Msa1216890 | 0.804035 | 2.620789e-49 | -8.615850e-47 |
| Msa0448550 | Msa1216890 | -0.801098 | 1.057003e-48 | -8.615850e-47 |
| Msa0458440 | Msa1216890 | 0.801262 | 9.784232e-49 | -8.615850e-47 |
| Msa0464900 | Msa1216890 | 0.820695 | 5.987932e-53 | -8.615850e-47 |
| Msa1006850 | Msa1216890 | 0.812199 | 4.779628e-51 | -8.615850e-47 |
| Msa1035300 | Msa1216890 | 0.809532 | 1.806125e-50 | -8.615850e-47 |
| Msa1041730 | Msa1216890 | 0.815134 | 1.079870e-51 | -8.615850e-47 |
| Msa1068200 | Msa1216890 | -0.807992 | 3.854638e-50 | -8.615850e-47 |
| Msa1080160 | Msa1216890 | 0.813264 | 2.794941e-51 | -8.615850e-47 |
| Msa1082500 | Msa1216890 | 0.832176 | 1.097630e-55 | -8.615850e-47 |
| Msa1084260 | Msa1216890 | 0.804833 | 1.787125e-49 | -8.615850e-47 |
| Msa1098400 | Msa1216890 | 0.809587 | 1.757802e-50 | -8.615850e-47 |
| Msa0239800 | Msa1216890 | 0.817469 | 3.244368e-52 | -8.615850e-47 |
| Msa0260810 | Msa1216890 | 0.816279 | 6.001294e-52 | -8.615850e-47 |
| Msa0265380 | Msa1216890 | 0.815668 | 8.214661e-52 | -8.615850e-47 |
| Msa0266000 | Msa1216890 | -0.803895 | 2.802156e-49 | -8.615850e-47 |
| Msa0272730 | Msa1216890 | 0.806157 | 9.427384e-50 | -8.615850e-47 |
| Msa0276920 | Msa1216890 | 0.801323 | 9.504458e-49 | -8.615850e-47 |
| Msa0277820 | Msa1216890 | 0.807446 | 5.034426e-50 | -8.615850e-47 |
| Msa0299730 | Msa1216890 | 0.809056 | 2.284543e-50 | -8.615850e-47 |
| Msa0311860 | Msa1216890 | 0.800221 | 1.595408e-48 | -8.615850e-47 |
| Msa0317510 | Msa1216890 | 0.827479 | 1.529004e-54 | -8.615850e-47 |
| Msa0317730 | Msa1216890 | 0.813768 | 2.165634e-51 | -8.615850e-47 |
| Msa0336250 | Msa1216890 | 0.815612 | 8.456964e-52 | -8.615850e-47 |
| Msa1118760 | Msa1216890 | 0.800321 | 1.522728e-48 | -8.615850e-47 |
| Msa1167220 | Msa1216890 | 0.801659 | 8.110215e-49 | -8.615850e-47 |
| Msa1181550 | Msa1216890 | 0.806372 | 8.493998e-50 | -8.615850e-47 |
| Msa1205370 | Msa1216890 | 0.808865 | 2.510246e-50 | -8.615850e-47 |
| Msa1216690 | Msa1216890 | 0.989502 | 2.125006e-178 | -8.615850e-47 |
| Msa1216890 | Msa1224480 | 0.804958 | 1.682438e-49 | -8.615850e-47 |
| Msa1216890 | Msa1267060 | 0.809055 | 2.285962e-50 | -8.615850e-47 |
| Msa1216890 | Msa1267610 | 0.800767 | 1.235217e-48 | -8.615850e-47 |
| Msa1216890 | Msa1270610 | 0.820743 | 5.838178e-53 | -8.615850e-47 |
| Msa1216890 | Msa1278840 | 0.810671 | 1.026563e-50 | -8.615850e-47 |
| Msa1216890 | Msa1306850 | 0.806696 | 7.256019e-50 | -8.615850e-47 |
| Msa1216890 | Msa1318240 | 0.809720 | 1.645841e-50 | -8.615850e-47 |
| Msa1216890 | Msa1329670 | 0.916534 | 1.587200e-85 | -8.615850e-47 |
| Msa1216890 | Msa1376890 | 0.835575 | 1.548995e-56 | -8.615850e-47 |
| Msa1216890 | Msa1379850 | 0.805303 | 1.424687e-49 | -8.615850e-47 |
| Msa1216890 | Msa1390050 | 0.816879 | 4.405225e-52 | -8.615850e-47 |
| Msa1216890 | Msa1393410 | 0.803505 | 3.376972e-49 | -8.615850e-47 |
| Msa1216890 | Msa1401530 | 0.807838 | 4.155916e-50 | -8.615850e-47 |
| Msa1216890 | Msa1404540 | 0.805658 | 1.200162e-49 | -8.615850e-47 |
| Msa1216890 | Msa1409700 | 0.825880 | 3.682323e-54 | -8.615850e-47 |
| Msa1216890 | Msa1431060 | 0.805069 | 1.594998e-49 | -8.615850e-47 |
| Msa1216890 | Msa1435420 | 0.801264 | 9.772688e-49 | -8.615850e-47 |
| Msa1216890 | Msa1436480 | 0.832996 | 6.871478e-56 | -8.615850e-47 |
| Msa1216890 | Msa1453250 | 0.800235 | 1.584944e-48 | -8.615850e-47 |
| Msa0484780 | Msa1216890 | 0.824896 | 6.295598e-54 | -8.615850e-47 |
| Msa0512870 | Msa1216890 | 0.807244 | 5.556105e-50 | -8.615850e-47 |
| Msa0516370 | Msa1216890 | 0.818558 | 1.840781e-52 | -8.615850e-47 |
| Msa0523460 | Msa1216890 | 0.804928 | 1.707204e-49 | -8.615850e-47 |
| Msa0555020 | Msa1216890 | 0.808778 | 2.620804e-50 | -8.615850e-47 |
| Msa0567020 | Msa1216890 | 0.835099 | 2.043184e-56 | -8.615850e-47 |
| Msa0572480 | Msa1216890 | 0.808683 | 2.745005e-50 | -8.615850e-47 |
| Msa0598160 | Msa1216890 | 0.803687 | 3.094900e-49 | -8.615850e-47 |
| Msa0599890 | Msa1216890 | 0.806528 | 7.875098e-50 | -8.615850e-47 |
| Msa0843780 | Msa1216890 | -0.801624 | 8.246425e-49 | -8.615850e-47 |
| Msa0867890 | Msa1216890 | 0.801560 | 8.499340e-49 | -8.615850e-47 |
| Msa0870530 | Msa1216890 | 0.806137 | 9.521322e-50 | -8.615850e-47 |
| Msa0880950 | Msa1216890 | 0.821842 | 3.255895e-53 | -8.615850e-47 |
| Msa0891040 | Msa1216890 | 0.805869 | 1.083801e-49 | -8.615850e-47 |
| Msa0924310 | Msa1216890 | 0.811115 | 8.225059e-51 | -8.615850e-47 |
| Msa0977180 | Msa1216890 | -0.817624 | 2.993684e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216890 | MtrunA17_Chr4g0066371 | 94.987 | 399 | 20 | 0 | 1 | 399 | 1 | 399 | 0.0 | 790 |
| Msa1216890 | MtrunA17_Chr2g0286951 | 68.983 | 403 | 119 | 4 | 1 | 399 | 1 | 401 | 0.0 | 551 |
| Msa1216890 | MtrunA17_Chr6g0486661 | 60.542 | 332 | 125 | 3 | 15 | 343 | 56 | 384 | 1.09e-133 | 409 |
| Msa1216890 | MtrunA17_Chr7g0243571 | 27.707 | 314 | 163 | 6 | 46 | 323 | 60 | 345 | 3.14e-31 | 123 |
| Msa1216890 | MtrunA17_Chr1g0192421 | 29.391 | 279 | 156 | 6 | 68 | 323 | 71 | 331 | 1.68e-30 | 120 |
| Msa1216890 | MtrunA17_Chr7g0221691 | 30.976 | 297 | 143 | 6 | 68 | 322 | 111 | 387 | 2.71e-30 | 121 |
| Msa1216890 | MtrunA17_Chr4g0004971 | 28.070 | 285 | 160 | 6 | 68 | 325 | 60 | 326 | 2.75e-30 | 119 |
| Msa1216890 | MtrunA17_Chr2g0295401 | 28.972 | 321 | 171 | 9 | 44 | 336 | 58 | 349 | 3.35e-29 | 116 |
| Msa1216890 | MtrunA17_Chr1g0150451 | 32.090 | 268 | 139 | 10 | 84 | 350 | 106 | 331 | 4.67e-29 | 115 |
| Msa1216890 | MtrunA17_Chr3g0136711 | 30.671 | 313 | 164 | 13 | 44 | 350 | 28 | 293 | 4.89e-29 | 114 |
| Msa1216890 | MtrunA17_Chr7g0249421 | 26.374 | 364 | 190 | 8 | 68 | 371 | 78 | 423 | 1.05e-28 | 117 |
| Msa1216890 | MtrunA17_Chr7g0272061 | 26.885 | 305 | 171 | 6 | 68 | 338 | 73 | 359 | 7.81e-28 | 113 |
| Msa1216890 | MtrunA17_Chr4g0067711 | 28.114 | 281 | 159 | 6 | 68 | 324 | 73 | 334 | 3.81e-27 | 110 |
| Msa1216890 | MtrunA17_Chr2g0324061 | 27.244 | 312 | 171 | 7 | 68 | 342 | 73 | 365 | 3.86e-27 | 112 |
| Msa1216890 | MtrunA17_Chr1g0151781 | 28.125 | 256 | 143 | 6 | 68 | 301 | 51 | 287 | 8.45e-27 | 109 |
| Msa1216890 | MtrunA17_Chr8g0342431 | 26.994 | 326 | 160 | 9 | 68 | 338 | 68 | 370 | 9.74e-27 | 110 |
| Msa1216890 | MtrunA17_Chr3g0105351 | 28.472 | 288 | 148 | 12 | 66 | 341 | 74 | 315 | 2.33e-26 | 107 |
| Msa1216890 | MtrunA17_Chr3g0105371 | 28.571 | 287 | 149 | 12 | 66 | 341 | 98 | 339 | 7.79e-26 | 107 |
| Msa1216890 | MtrunA17_Chr4g0022171 | 26.332 | 319 | 178 | 7 | 68 | 348 | 79 | 378 | 1.61e-25 | 107 |
| Msa1216890 | MtrunA17_Chr1g0212961 | 30.682 | 264 | 139 | 11 | 76 | 339 | 117 | 336 | 1.78e-25 | 105 |
| Msa1216890 | MtrunA17_Chr5g0430481 | 29.181 | 281 | 149 | 12 | 69 | 341 | 137 | 375 | 2.29e-25 | 106 |
| Msa1216890 | MtrunA17_Chr2g0317021 | 28.623 | 276 | 152 | 10 | 69 | 341 | 100 | 333 | 1.60e-24 | 103 |
| Msa1216890 | MtrunA17_Chr3g0126511 | 29.304 | 273 | 152 | 9 | 69 | 340 | 108 | 340 | 2.56e-24 | 103 |
| Msa1216890 | MtrunA17_Chr4g0065141 | 31.599 | 269 | 128 | 12 | 84 | 338 | 122 | 348 | 1.03e-23 | 101 |
| Msa1216890 | MtrunA17_Chr5g0407161 | 28.626 | 262 | 136 | 10 | 86 | 338 | 124 | 343 | 3.15e-22 | 97.4 |
| Msa1216890 | MtrunA17_Chr1g0150781 | 25.610 | 328 | 163 | 12 | 49 | 341 | 263 | 544 | 1.48e-20 | 93.6 |
| Msa1216890 | MtrunA17_Chr2g0293811 | 27.957 | 279 | 140 | 9 | 86 | 345 | 100 | 336 | 1.76e-20 | 92.0 |
| Msa1216890 | MtrunA17_Chr5g0426141 | 25.298 | 336 | 194 | 13 | 7 | 341 | 3 | 282 | 2.83e-20 | 90.1 |
| Msa1216890 | MtrunA17_Chr4g0051661 | 30.233 | 258 | 136 | 13 | 83 | 338 | 180 | 395 | 3.82e-19 | 88.6 |
| Msa1216890 | MtrunA17_Chr4g0070871 | 28.270 | 237 | 119 | 8 | 82 | 304 | 249 | 448 | 5.69e-19 | 88.6 |
| Msa1216890 | MtrunA17_Chr8g0360351 | 27.451 | 255 | 144 | 9 | 86 | 339 | 66 | 280 | 1.13e-18 | 85.5 |
| Msa1216890 | MtrunA17_Chr1g0194191 | 28.369 | 282 | 141 | 11 | 86 | 348 | 118 | 357 | 1.35e-18 | 86.7 |
| Msa1216890 | MtrunA17_Chr3g0138281 | 28.679 | 265 | 135 | 10 | 86 | 338 | 121 | 343 | 4.05e-18 | 85.5 |
| Msa1216890 | MtrunA17_Chr3g0112291 | 28.340 | 247 | 125 | 10 | 69 | 298 | 106 | 317 | 5.81e-18 | 84.7 |
| Msa1216890 | MtrunA17_Chr8g0389921 | 26.007 | 273 | 154 | 8 | 84 | 341 | 196 | 435 | 1.44e-17 | 84.3 |
| Msa1216890 | MtrunA17_Chr5g0396731 | 28.761 | 226 | 116 | 6 | 86 | 301 | 107 | 297 | 3.49e-16 | 79.3 |
| Msa1216890 | MtrunA17_Chr3g0144111 | 27.481 | 262 | 118 | 10 | 86 | 338 | 27 | 225 | 8.33e-16 | 77.0 |
| Msa1216890 | MtrunA17_Chr1g0171571 | 27.972 | 286 | 158 | 11 | 69 | 344 | 401 | 648 | 1.06e-14 | 75.9 |
| Msa1216890 | MtrunA17_Chr1g0185141 | 27.778 | 252 | 104 | 9 | 147 | 349 | 225 | 447 | 5.07e-14 | 73.9 |
| Msa1216890 | MtrunA17_Chr5g0435721 | 29.046 | 241 | 112 | 13 | 85 | 304 | 222 | 424 | 2.28e-13 | 71.6 |
| Msa1216890 | MtrunA17_Chr7g0225501 | 27.519 | 258 | 136 | 12 | 59 | 296 | 54 | 280 | 4.60e-12 | 67.4 |
| Msa1216890 | MtrunA17_Chr1g0209451 | 27.703 | 296 | 152 | 14 | 66 | 340 | 43 | 297 | 5.10e-12 | 67.0 |
| Msa1216890 | MtrunA17_Chr7g0271971 | 27.946 | 297 | 154 | 14 | 64 | 340 | 41 | 297 | 6.48e-12 | 66.6 |
| Msa1216890 | MtrunA17_Chr1g0192471 | 28.571 | 308 | 148 | 17 | 59 | 340 | 36 | 297 | 1.09e-11 | 66.2 |
| Msa1216890 | MtrunA17_Chr1g0175381 | 26.190 | 252 | 140 | 11 | 86 | 313 | 79 | 308 | 4.81e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216890 | AT3G06270.1 | 68.012 | 347 | 109 | 1 | 1 | 345 | 1 | 347 | 4.19e-174 | 489 |
| Msa1216890 | AT2G20050.1 | 63.323 | 319 | 113 | 1 | 40 | 354 | 97 | 415 | 1.88e-138 | 422 |
| Msa1216890 | AT2G20050.2 | 63.323 | 319 | 113 | 1 | 40 | 354 | 97 | 415 | 2.09e-138 | 422 |
| Msa1216890 | AT5G27930.1 | 27.609 | 297 | 171 | 6 | 68 | 338 | 74 | 352 | 2.70e-31 | 123 |
| Msa1216890 | AT5G27930.2 | 27.609 | 297 | 171 | 6 | 68 | 338 | 74 | 352 | 2.70e-31 | 123 |
| Msa1216890 | AT5G26010.1 | 32.479 | 234 | 128 | 5 | 80 | 301 | 67 | 282 | 3.37e-31 | 122 |
| Msa1216890 | AT5G10740.1 | 32.155 | 283 | 149 | 10 | 60 | 339 | 36 | 278 | 9.09e-30 | 118 |
| Msa1216890 | AT5G10740.2 | 32.155 | 283 | 149 | 10 | 60 | 339 | 36 | 278 | 9.09e-30 | 118 |
| Msa1216890 | AT5G36250.1 | 27.327 | 333 | 174 | 7 | 68 | 350 | 80 | 394 | 9.30e-30 | 120 |
| Msa1216890 | AT3G05640.2 | 30.182 | 275 | 156 | 6 | 68 | 324 | 75 | 331 | 1.64e-29 | 117 |
| Msa1216890 | AT3G05640.1 | 30.182 | 275 | 156 | 6 | 68 | 324 | 75 | 331 | 1.64e-29 | 117 |
| Msa1216890 | AT3G05640.3 | 30.182 | 275 | 156 | 6 | 68 | 324 | 75 | 331 | 1.64e-29 | 117 |
| Msa1216890 | AT4G31750.2 | 31.907 | 257 | 134 | 9 | 84 | 339 | 62 | 278 | 2.96e-29 | 115 |
| Msa1216890 | AT4G31750.1 | 31.907 | 257 | 134 | 9 | 84 | 339 | 62 | 278 | 4.33e-29 | 115 |
| Msa1216890 | AT4G31750.3 | 31.907 | 257 | 134 | 9 | 84 | 339 | 62 | 278 | 4.33e-29 | 115 |
| Msa1216890 | AT4G03415.1 | 27.187 | 320 | 175 | 8 | 68 | 348 | 80 | 380 | 1.13e-28 | 117 |
| Msa1216890 | AT4G03415.3 | 27.187 | 320 | 175 | 8 | 68 | 348 | 80 | 380 | 1.13e-28 | 117 |
| Msa1216890 | AT4G03415.2 | 27.187 | 320 | 175 | 8 | 68 | 348 | 80 | 380 | 1.13e-28 | 117 |
| Msa1216890 | AT4G32950.1 | 31.298 | 262 | 152 | 8 | 88 | 340 | 74 | 316 | 2.04e-28 | 114 |
| Msa1216890 | AT5G24940.1 | 32.443 | 262 | 126 | 10 | 84 | 339 | 62 | 278 | 8.78e-28 | 114 |
| Msa1216890 | AT5G01700.1 | 26.403 | 303 | 168 | 6 | 68 | 340 | 11 | 288 | 2.14e-27 | 111 |
| Msa1216890 | AT5G01700.2 | 26.403 | 303 | 168 | 6 | 68 | 340 | 60 | 337 | 3.21e-27 | 112 |
| Msa1216890 | AT1G03590.1 | 27.974 | 311 | 169 | 8 | 68 | 342 | 73 | 364 | 7.30e-27 | 112 |
| Msa1216890 | AT5G36250.2 | 26.225 | 347 | 174 | 8 | 68 | 350 | 80 | 408 | 1.65e-26 | 110 |
| Msa1216890 | AT5G27930.3 | 29.457 | 258 | 138 | 6 | 68 | 299 | 74 | 313 | 2.08e-26 | 108 |
| Msa1216890 | AT1G78200.1 | 29.492 | 295 | 164 | 13 | 49 | 341 | 31 | 283 | 7.52e-26 | 106 |
| Msa1216890 | AT1G78200.3 | 29.492 | 295 | 164 | 13 | 49 | 341 | 31 | 283 | 7.52e-26 | 106 |
| Msa1216890 | AT1G78200.2 | 29.492 | 295 | 164 | 13 | 49 | 341 | 31 | 283 | 7.52e-26 | 106 |
| Msa1216890 | AT1G16220.1 | 26.048 | 334 | 181 | 7 | 68 | 356 | 77 | 389 | 1.89e-25 | 108 |
| Msa1216890 | AT3G16800.2 | 27.931 | 290 | 172 | 6 | 68 | 338 | 75 | 346 | 2.51e-25 | 105 |
| Msa1216890 | AT3G16800.1 | 27.931 | 290 | 172 | 6 | 68 | 338 | 75 | 346 | 2.51e-25 | 105 |
| Msa1216890 | AT3G16800.3 | 27.931 | 290 | 172 | 6 | 68 | 338 | 75 | 346 | 2.51e-25 | 105 |
| Msa1216890 | AT1G78200.5 | 30.597 | 268 | 145 | 12 | 76 | 341 | 10 | 238 | 1.48e-24 | 101 |
| Msa1216890 | AT1G78200.4 | 30.597 | 268 | 145 | 12 | 76 | 341 | 10 | 238 | 1.48e-24 | 101 |
| Msa1216890 | AT3G02750.2 | 29.091 | 275 | 164 | 7 | 110 | 379 | 177 | 425 | 1.50e-24 | 105 |
| Msa1216890 | AT3G02750.1 | 29.091 | 275 | 164 | 7 | 110 | 379 | 177 | 425 | 1.50e-24 | 105 |
| Msa1216890 | AT5G36250.3 | 28.519 | 270 | 127 | 6 | 68 | 289 | 80 | 331 | 3.15e-24 | 102 |
| Msa1216890 | AT5G53140.1 | 27.007 | 274 | 159 | 9 | 69 | 341 | 115 | 348 | 5.46e-24 | 103 |
| Msa1216890 | AT5G53140.2 | 27.007 | 274 | 159 | 9 | 69 | 341 | 115 | 348 | 5.46e-24 | 103 |
| Msa1216890 | AT3G51470.2 | 29.252 | 294 | 153 | 13 | 58 | 338 | 30 | 281 | 7.36e-24 | 101 |
| Msa1216890 | AT3G51470.1 | 29.252 | 294 | 153 | 13 | 58 | 338 | 74 | 325 | 1.51e-23 | 101 |
| Msa1216890 | AT4G32950.2 | 34.450 | 209 | 111 | 7 | 88 | 289 | 74 | 263 | 3.53e-23 | 98.6 |
| Msa1216890 | AT3G16800.4 | 27.881 | 269 | 157 | 6 | 89 | 338 | 1 | 251 | 5.12e-23 | 97.8 |
| Msa1216890 | AT3G16800.6 | 27.881 | 269 | 157 | 6 | 89 | 338 | 1 | 251 | 5.12e-23 | 97.8 |
| Msa1216890 | AT1G07160.1 | 28.470 | 281 | 152 | 9 | 69 | 340 | 136 | 376 | 5.53e-23 | 99.8 |
| Msa1216890 | AT1G79630.2 | 30.000 | 200 | 119 | 4 | 142 | 338 | 146 | 327 | 1.87e-22 | 99.0 |
| Msa1216890 | AT1G79630.7 | 30.000 | 200 | 119 | 4 | 142 | 338 | 146 | 327 | 1.87e-22 | 99.0 |
| Msa1216890 | AT1G79630.1 | 30.000 | 200 | 119 | 4 | 142 | 338 | 216 | 397 | 2.04e-22 | 99.4 |
| Msa1216890 | AT1G79630.8 | 30.000 | 200 | 119 | 4 | 142 | 338 | 212 | 393 | 2.26e-22 | 99.4 |
| Msa1216890 | AT1G79630.6 | 30.000 | 200 | 119 | 4 | 142 | 338 | 106 | 287 | 2.29e-22 | 98.2 |
| Msa1216890 | AT1G79630.3 | 30.000 | 200 | 119 | 4 | 142 | 338 | 106 | 287 | 2.29e-22 | 98.2 |
| Msa1216890 | AT1G79630.4 | 30.000 | 200 | 119 | 4 | 142 | 338 | 106 | 287 | 2.29e-22 | 98.2 |
| Msa1216890 | AT1G79630.5 | 30.000 | 200 | 119 | 4 | 142 | 338 | 106 | 287 | 2.29e-22 | 98.2 |
| Msa1216890 | AT1G43900.1 | 28.467 | 274 | 154 | 9 | 69 | 341 | 137 | 369 | 6.14e-22 | 96.7 |
| Msa1216890 | AT5G57050.2 | 26.471 | 306 | 152 | 10 | 81 | 350 | 113 | 381 | 3.03e-19 | 89.0 |
| Msa1216890 | AT5G57050.1 | 26.471 | 306 | 152 | 10 | 81 | 350 | 153 | 421 | 3.80e-19 | 89.0 |
| Msa1216890 | AT1G34750.2 | 26.966 | 267 | 153 | 11 | 76 | 341 | 57 | 282 | 4.07e-19 | 87.0 |
| Msa1216890 | AT1G34750.1 | 26.966 | 267 | 153 | 11 | 76 | 341 | 57 | 282 | 4.07e-19 | 87.0 |
| Msa1216890 | AT1G34750.3 | 26.966 | 267 | 153 | 11 | 76 | 341 | 57 | 282 | 4.07e-19 | 87.0 |
| Msa1216890 | AT2G40180.1 | 30.855 | 269 | 130 | 13 | 86 | 341 | 161 | 386 | 4.21e-19 | 88.6 |
| Msa1216890 | AT3G02750.3 | 28.188 | 298 | 172 | 10 | 110 | 379 | 177 | 460 | 5.81e-19 | 89.4 |
| Msa1216890 | AT1G48040.1 | 26.909 | 275 | 136 | 9 | 86 | 338 | 116 | 347 | 7.91e-19 | 87.8 |
| Msa1216890 | AT2G25620.1 | 27.941 | 272 | 138 | 10 | 86 | 341 | 128 | 357 | 1.35e-18 | 87.4 |
| Msa1216890 | AT2G25620.2 | 27.941 | 272 | 138 | 10 | 86 | 341 | 128 | 357 | 1.35e-18 | 87.4 |
| Msa1216890 | AT2G20630.1 | 26.538 | 260 | 150 | 9 | 83 | 341 | 60 | 279 | 1.99e-18 | 85.1 |
| Msa1216890 | AT3G15260.2 | 27.132 | 258 | 145 | 9 | 86 | 341 | 73 | 289 | 2.67e-18 | 85.1 |
| Msa1216890 | AT3G15260.1 | 27.132 | 258 | 145 | 9 | 86 | 341 | 73 | 289 | 2.67e-18 | 85.1 |
| Msa1216890 | AT2G30020.1 | 27.972 | 286 | 148 | 11 | 69 | 341 | 153 | 393 | 2.93e-18 | 86.3 |
| Msa1216890 | AT2G33700.1 | 27.099 | 262 | 140 | 9 | 86 | 338 | 123 | 342 | 5.92e-18 | 85.1 |
| Msa1216890 | AT1G72770.4 | 26.557 | 305 | 139 | 11 | 85 | 342 | 237 | 503 | 9.04e-18 | 85.5 |
| Msa1216890 | AT1G72770.1 | 26.557 | 305 | 139 | 11 | 85 | 342 | 237 | 503 | 9.04e-18 | 85.5 |
| Msa1216890 | AT1G72770.3 | 26.557 | 305 | 139 | 11 | 85 | 342 | 237 | 503 | 9.04e-18 | 85.5 |
| Msa1216890 | AT1G22280.1 | 24.068 | 295 | 179 | 11 | 48 | 341 | 31 | 281 | 9.33e-18 | 83.2 |
| Msa1216890 | AT4G28400.3 | 27.059 | 255 | 145 | 9 | 86 | 339 | 45 | 259 | 1.24e-17 | 82.4 |
| Msa1216890 | AT2G20630.2 | 26.562 | 256 | 147 | 9 | 83 | 337 | 60 | 275 | 1.38e-17 | 82.8 |
| Msa1216890 | AT4G28400.1 | 27.059 | 255 | 145 | 9 | 86 | 339 | 67 | 281 | 1.64e-17 | 82.4 |
| Msa1216890 | AT5G51760.2 | 29.412 | 255 | 118 | 8 | 75 | 302 | 103 | 322 | 6.08e-17 | 82.4 |
| Msa1216890 | AT5G51760.1 | 29.412 | 255 | 118 | 8 | 75 | 302 | 133 | 352 | 6.40e-17 | 82.4 |
| Msa1216890 | AT3G17250.1 | 26.619 | 278 | 139 | 10 | 84 | 338 | 156 | 391 | 8.01e-17 | 82.0 |
| Msa1216890 | AT1G09160.2 | 31.788 | 302 | 146 | 19 | 59 | 340 | 36 | 297 | 6.49e-16 | 79.3 |
| Msa1216890 | AT1G09160.1 | 31.788 | 302 | 146 | 19 | 59 | 340 | 36 | 297 | 6.49e-16 | 79.3 |
| Msa1216890 | AT1G22280.3 | 23.920 | 301 | 178 | 12 | 48 | 341 | 31 | 287 | 7.51e-16 | 77.8 |
| Msa1216890 | AT2G34740.1 | 25.000 | 272 | 161 | 10 | 69 | 338 | 102 | 332 | 7.56e-16 | 78.6 |
| Msa1216890 | AT2G29380.1 | 25.952 | 289 | 144 | 13 | 85 | 341 | 111 | 361 | 8.53e-15 | 75.5 |
| Msa1216890 | AT1G68410.4 | 30.743 | 296 | 143 | 17 | 66 | 340 | 48 | 302 | 2.02e-13 | 72.0 |
| Msa1216890 | AT1G68410.3 | 30.743 | 296 | 143 | 17 | 66 | 340 | 48 | 302 | 2.02e-13 | 72.0 |
| Msa1216890 | AT1G68410.1 | 30.743 | 296 | 143 | 17 | 66 | 340 | 48 | 302 | 2.02e-13 | 72.0 |
| Msa1216890 | AT1G68410.2 | 30.743 | 296 | 143 | 17 | 66 | 340 | 48 | 302 | 2.02e-13 | 72.0 |
| Msa1216890 | AT3G11410.1 | 27.347 | 245 | 117 | 11 | 83 | 302 | 134 | 342 | 4.73e-13 | 70.5 |
| Msa1216890 | AT2G34740.2 | 26.222 | 225 | 128 | 9 | 69 | 291 | 116 | 304 | 1.01e-12 | 68.9 |
| Msa1216890 | AT2G34740.3 | 26.222 | 225 | 128 | 9 | 69 | 291 | 98 | 286 | 1.11e-12 | 68.6 |
| Msa1216890 | AT5G57050.3 | 33.333 | 144 | 73 | 6 | 81 | 209 | 153 | 288 | 1.45e-11 | 65.5 |
| Msa1216890 | AT5G02760.1 | 25.397 | 315 | 145 | 14 | 81 | 340 | 65 | 344 | 1.57e-11 | 65.9 |
| Msa1216890 | AT1G72770.2 | 31.373 | 153 | 71 | 6 | 85 | 209 | 237 | 383 | 2.94e-11 | 65.1 |
| Msa1216890 | AT1G72770.5 | 31.373 | 153 | 71 | 6 | 85 | 209 | 237 | 383 | 2.94e-11 | 65.1 |
| Msa1216890 | AT1G47380.1 | 26.174 | 298 | 172 | 13 | 66 | 349 | 39 | 302 | 6.53e-11 | 64.3 |
| Msa1216890 | AT1G34750.4 | 26.728 | 217 | 122 | 10 | 76 | 291 | 57 | 237 | 9.18e-11 | 62.4 |
Find 146 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGTAGAAACTGTTTGATTT+TGG | 0.169277 | 8_1:-79043408 | None:intergenic |
| TCTCCAGGTGAGATTCTTTA+TGG | 0.170664 | 8_1:-79046840 | None:intergenic |
| TTTACCGGTCACTATATATT+TGG | 0.177630 | 8_1:+79046650 | Msa1216890:three_prime_UTR |
| TTGACTCTTCCTTCTTCATT+AGG | 0.181058 | 8_1:+79043238 | Msa1216890:five_prime_UTR |
| ATTATCATTGTCCAGATTAA+AGG | 0.182707 | 8_1:+79045708 | Msa1216890:CDS |
| CAAGTTGACGTGAAGAATTT+TGG | 0.184990 | 8_1:-79043211 | None:intergenic |
| AATTTCAAAAGGATCAAATT+TGG | 0.225220 | 8_1:+79043605 | Msa1216890:five_prime_UTR |
| TTACCCCAGTGTTGGATATT+TGG | 0.226477 | 8_1:-79044412 | None:intergenic |
| ACAGGATCCTTCACCAATTC+AGG | 0.227180 | 8_1:-79044100 | None:intergenic |
| TGACTCTTCCTTCTTCATTA+GGG | 0.259340 | 8_1:+79043239 | Msa1216890:five_prime_UTR |
| CCTCTGTTTCTCTTCTTTGA+AGG | 0.266047 | 8_1:+79043276 | Msa1216890:five_prime_UTR |
| CTGCATTTACAAGGAGTTTA+GGG | 0.266150 | 8_1:+79044497 | Msa1216890:CDS |
| TTGGGGTGACTTTGAGAAAA+AGG | 0.273728 | 8_1:-79043389 | None:intergenic |
| AGCTTACAATTCTGCGTTCT+CGG | 0.277270 | 8_1:+79044126 | Msa1216890:CDS |
| CATTGCTCCTGTACATTTAC+CGG | 0.278853 | 8_1:+79046635 | Msa1216890:three_prime_UTR |
| AACCCGAATATCCATTTCTT+TGG | 0.294164 | 8_1:+79043995 | Msa1216890:CDS |
| ACTGCATTTACAAGGAGTTT+AGG | 0.296176 | 8_1:+79044496 | Msa1216890:CDS |
| TTCCCAAATGGGATGTTTCC+TGG | 0.311843 | 8_1:+79044472 | Msa1216890:CDS |
| TCCTTCACACAACTTTGTTT+TGG | 0.323600 | 8_1:+79043880 | Msa1216890:CDS |
| ACACCAAAGAAATGGATATT+CGG | 0.329115 | 8_1:-79043998 | None:intergenic |
| GAAAATGCAATGAAGGTTCT+AGG | 0.330257 | 8_1:-79043346 | None:intergenic |
| TATTAGAGAGTCCTTTAATC+TGG | 0.331443 | 8_1:-79045719 | None:intergenic |
| TGATCAAGTGGAAGGGATTA+AGG | 0.333034 | 8_1:+79044387 | Msa1216890:CDS |
| CACCAACATTAGCAACATAA+AGG | 0.344783 | 8_1:-79044234 | None:intergenic |
| TTTGATGGGCATGGTCAATT+TGG | 0.349419 | 8_1:+79044022 | Msa1216890:CDS |
| TTCTTTATTGTTGCTAGTGA+TGG | 0.360065 | 8_1:+79044595 | Msa1216890:CDS |
| AAACTTTGTTAGAGATAGTT+TGG | 0.363044 | 8_1:+79044057 | Msa1216890:CDS |
| CACCAAAGAAATGGATATTC+GGG | 0.365530 | 8_1:-79043997 | None:intergenic |
| GAGTCAAATTTGAGCTCAAT+AGG | 0.367013 | 8_1:-79043469 | None:intergenic |
| GTTCCAGGAAACATCCCATT+TGG | 0.370982 | 8_1:-79044475 | None:intergenic |
| CTCCTTGTAAATGCAGTTCC+AGG | 0.374803 | 8_1:-79044490 | None:intergenic |
| ACATTGTAGTCAAGCACATC+TGG | 0.378787 | 8_1:+79046235 | Msa1216890:intron |
| GAGAGCTGTGATAGCTGTTA+AGG | 0.383368 | 8_1:+79044261 | Msa1216890:CDS |
| AAGCCAAACTGTTGTTGATA+TGG | 0.388203 | 8_1:+79044636 | Msa1216890:CDS |
| TGAAACATGGGTTGTGTTCA+TGG | 0.388527 | 8_1:+79043749 | Msa1216890:exon |
| ACAATAAAGAAGAGATGATT+AGG | 0.391372 | 8_1:-79044583 | None:intergenic |
| TTGTTTAGCCATACCCTCTC+TGG | 0.391835 | 8_1:+79046796 | Msa1216890:three_prime_UTR |
| TTTGATAGCAACAAACAAAT+GGG | 0.402553 | 8_1:-79043523 | None:intergenic |
| ATTTGATAGCAACAAACAAA+TGG | 0.408534 | 8_1:-79043524 | None:intergenic |
| AAGGAGTTTAGGGGATAGAT+TGG | 0.411034 | 8_1:+79044507 | Msa1216890:CDS |
| GTTATCTAACGACCCTGAAT+TGG | 0.416488 | 8_1:+79044087 | Msa1216890:CDS |
| GAGCTTGTATGTTCTTCCTA+TGG | 0.417871 | 8_1:-79043832 | None:intergenic |
| CGAGATTGTGGTTCCCAAAT+GGG | 0.427237 | 8_1:+79044461 | Msa1216890:CDS |
| TGCAAAAGACTCAGAAAAGT+TGG | 0.428627 | 8_1:-79046614 | None:intergenic |
| TACGAGAGAGTGAAACTTTG+TGG | 0.431653 | 8_1:+79044346 | Msa1216890:CDS |
| CCGAGATTGTGGTTCCCAAA+TGG | 0.432081 | 8_1:+79044460 | Msa1216890:CDS |
| CCTCTGATCAGACACCATTT+CGG | 0.433454 | 8_1:+79044314 | Msa1216890:CDS |
| ATTTGAGCTCAATAGGTAGA+AGG | 0.434313 | 8_1:-79043462 | None:intergenic |
| CAGACAAGAAAATGCAATGA+AGG | 0.437748 | 8_1:-79043353 | None:intergenic |
| CTGAAGAGTCATATAAACTA+TGG | 0.438665 | 8_1:+79045652 | Msa1216890:CDS |
| GCTATTACAGTGCTTGTTGT+TGG | 0.438993 | 8_1:+79044205 | Msa1216890:CDS |
| TCCTTGTAGTTTCTCCTAAG+TGG | 0.444679 | 8_1:+79046577 | Msa1216890:three_prime_UTR |
| TTCCAGGAAACATCCCATTT+GGG | 0.447799 | 8_1:-79044474 | None:intergenic |
| TCAACTCATCTTTGACTGGC+AGG | 0.448632 | 8_1:-79046383 | None:intergenic |
| ATACCATATCAACAACAGTT+TGG | 0.450437 | 8_1:-79044639 | None:intergenic |
| ACTATATATTTGGTTGTTCA+AGG | 0.453908 | 8_1:+79046660 | Msa1216890:three_prime_UTR |
| GGGTATGAGGTTCATTGTCT+TGG | 0.470077 | 8_1:+79046688 | Msa1216890:three_prime_UTR |
| AACTGGGTCCTATTGTCATT+CGG | 0.471259 | 8_1:+79046951 | Msa1216890:three_prime_UTR |
| GATAGATTGGCGGAGACAAT+TGG | 0.474209 | 8_1:+79044520 | Msa1216890:CDS |
| CTGGGGTAACGAAGAGAGTT+GGG | 0.475410 | 8_1:+79044426 | Msa1216890:CDS |
| ATGTTGCTGTGTGAAATCTT+TGG | 0.476177 | 8_1:+79043775 | Msa1216890:CDS |
| ACCAACATTAGCAACATAAA+GGG | 0.477778 | 8_1:-79044233 | None:intergenic |
| GAGTGAAACTTTGTGGAGCA+AGG | 0.485633 | 8_1:+79044353 | Msa1216890:CDS |
| GTTCAAGGCAGCCGGGTATG+AGG | 0.489981 | 8_1:+79046675 | Msa1216890:three_prime_UTR |
| ATTTGGTTGTTCAAGGCAGC+CGG | 0.490140 | 8_1:+79046667 | Msa1216890:three_prime_UTR |
| AGTAGTACCTTTCGTGGGGT+GGG | 0.490336 | 8_1:-79043309 | None:intergenic |
| TCGTATTCATCTCTCCGAAA+TGG | 0.490543 | 8_1:-79044328 | None:intergenic |
| ACATGATACCCAATTTCAAA+AGG | 0.491484 | 8_1:+79043594 | Msa1216890:five_prime_UTR |
| TTCCTGGAACTGCATTTACA+AGG | 0.492066 | 8_1:+79044488 | Msa1216890:CDS |
| AATGAGAGAGACAGGAGAAG+TGG | 0.495363 | 8_1:-79043188 | None:intergenic |
| TGCATTAGGACGGAAATTCA+AGG | 0.496046 | 8_1:+79043971 | Msa1216890:CDS |
| AGAGCTGTGATAGCTGTTAA+GGG | 0.499710 | 8_1:+79044262 | Msa1216890:CDS |
| GCAGAATTGTAAGCTCGAAC+AGG | 0.504003 | 8_1:-79044118 | None:intergenic |
| GATGGCGGCTCTAGAAAACT+TGG | 0.504312 | 8_1:+79043797 | Msa1216890:CDS |
| ACACAACCCATGTTTCAAAC+AGG | 0.505574 | 8_1:-79043743 | None:intergenic |
| AGCTGAACTATTGACACCTC+TGG | 0.506076 | 8_1:-79044556 | None:intergenic |
| CAGAAAGTAGAAATTAGAGT+TGG | 0.507926 | 8_1:+79046731 | Msa1216890:three_prime_UTR |
| ACCCTTTATGTTGCTAATGT+TGG | 0.524420 | 8_1:+79044232 | Msa1216890:CDS |
| TTATTCAACTCATCTTTGAC+TGG | 0.527302 | 8_1:-79046387 | None:intergenic |
| CATCTCAGAAGTTCCTGTCC+TGG | 0.530672 | 8_1:-79046299 | None:intergenic |
| TTGAGTGTTGATCAAGTGGA+AGG | 0.530984 | 8_1:+79044379 | Msa1216890:CDS |
| AAGTAGTACCTTTCGTGGGG+TGG | 0.532029 | 8_1:-79043310 | None:intergenic |
| ACTGGGGTAACGAAGAGAGT+TGG | 0.535227 | 8_1:+79044425 | Msa1216890:CDS |
| GTAACCTCGCAGTGTGAGAA+AGG | 0.536584 | 8_1:-79043909 | None:intergenic |
| GTAGTACCTTTCGTGGGGTG+GGG | 0.541925 | 8_1:-79043308 | None:intergenic |
| TGTGATAGCTGTTAAGGGTG+GGG | 0.542620 | 8_1:+79044267 | Msa1216890:CDS |
| AAGGAAAACCCTAATGAAGA+AGG | 0.543390 | 8_1:-79043247 | None:intergenic |
| CCATTTGGGAACCACAATCT+CGG | 0.544156 | 8_1:-79044460 | None:intergenic |
| CTGTGATAGCTGTTAAGGGT+GGG | 0.544181 | 8_1:+79044266 | Msa1216890:CDS |
| TTTGGTTGTTCAAGGCAGCC+GGG | 0.547435 | 8_1:+79046668 | Msa1216890:three_prime_UTR |
| AGTGAAACTTTGTGGAGCAA+GGG | 0.549706 | 8_1:+79044354 | Msa1216890:CDS |
| ATAGTGACCGGTAAATGTAC+AGG | 0.552466 | 8_1:-79046642 | None:intergenic |
| AGGATCCAAATATCCAACAC+TGG | 0.555282 | 8_1:+79044407 | Msa1216890:CDS |
| TGAGTGTTGATCAAGTGGAA+GGG | 0.556319 | 8_1:+79044380 | Msa1216890:CDS |
| GAGTTTAGGGGATAGATTGG+CGG | 0.561902 | 8_1:+79044510 | Msa1216890:CDS |
| TCTCTTCGTTACCCCAGTGT+TGG | 0.563931 | 8_1:-79044420 | None:intergenic |
| ATATCACCTGTTTGAAACAT+GGG | 0.564125 | 8_1:+79043737 | Msa1216890:exon |
| GGATCCAAATATCCAACACT+GGG | 0.565827 | 8_1:+79044408 | Msa1216890:CDS |
| TCTTTACAGGGAACAAAGAG+AGG | 0.567828 | 8_1:+79046530 | Msa1216890:intron |
| GATATCACCTGTTTGAAACA+TGG | 0.568845 | 8_1:+79043736 | Msa1216890:exon |
| CTTTACAGGGAACAAAGAGA+GGG | 0.574860 | 8_1:+79046531 | Msa1216890:intron |
| ACTGCACCCCACCCCACGAA+AGG | 0.577373 | 8_1:+79043302 | Msa1216890:five_prime_UTR |
| GATACAATAAAACATTCTCC+AGG | 0.580533 | 8_1:-79046855 | None:intergenic |
| TTGGTTATCATCATAGCCAT+AGG | 0.581172 | 8_1:+79043816 | Msa1216890:CDS |
| TAATTTCTACTTTCTGAACA+AGG | 0.582956 | 8_1:-79046724 | None:intergenic |
| GGGTGGGGATCGGATTATTG+CGG | 0.585455 | 8_1:+79044282 | Msa1216890:CDS |
| TGCTGTGTGAAATCTTTGGA+TGG | 0.594368 | 8_1:+79043779 | Msa1216890:CDS |
| AGAGAAACAGAGGAACATGA+AGG | 0.596213 | 8_1:-79043266 | None:intergenic |
| CCGAAATGGTGTCTGATCAG+AGG | 0.599821 | 8_1:-79044314 | None:intergenic |
| ACAACCAAATATATAGTGAC+CGG | 0.600585 | 8_1:-79046654 | None:intergenic |
| AGTATAGTATAGTATAGCAT+AGG | 0.601271 | 8_1:+79043714 | Msa1216890:five_prime_UTR |
| ACCACTTAGGAGAAACTACA+AGG | 0.602100 | 8_1:-79046578 | None:intergenic |
| CAGGATCCTTCACCAATTCA+GGG | 0.602285 | 8_1:-79044099 | None:intergenic |
| AATTTGGAGTTACAATGCAA+AGG | 0.605004 | 8_1:+79043621 | Msa1216890:five_prime_UTR |
| TTTGCTTATCCAGCGAATCA+GGG | 0.607172 | 8_1:-79043934 | None:intergenic |
| TCCAAAACAAAGTTGTGTGA+AGG | 0.609730 | 8_1:-79043881 | None:intergenic |
| GCTGTGATAGCTGTTAAGGG+TGG | 0.610038 | 8_1:+79044265 | Msa1216890:CDS |
| CAATTAAGTGAGGTCAATGT+CGG | 0.610601 | 8_1:+79046262 | Msa1216890:CDS |
| TAACGACCCTGAATTGGTGA+AGG | 0.614068 | 8_1:+79044093 | Msa1216890:CDS |
| ATGATAAACATCAAATTCAG+TGG | 0.614811 | 8_1:-79046329 | None:intergenic |
| TGCATTTACAAGGAGTTTAG+GGG | 0.615174 | 8_1:+79044498 | Msa1216890:CDS |
| TTGATAGCAACAAACAAATG+GGG | 0.616102 | 8_1:-79043522 | None:intergenic |
| AGAGTCATATAAACTATGGT+CGG | 0.617426 | 8_1:+79045656 | Msa1216890:CDS |
| AACATAGAAATGTACCACTT+AGG | 0.617985 | 8_1:-79046591 | None:intergenic |
| TCGGTACTGCTATGAGAACC+AGG | 0.619300 | 8_1:+79046281 | Msa1216890:CDS |
| TAGCTGTTAAGGGTGGGGAT+CGG | 0.622651 | 8_1:+79044272 | Msa1216890:CDS |
| ACTGCTATGAGAACCAGGAC+AGG | 0.627745 | 8_1:+79046286 | Msa1216890:CDS |
| AGATCCTCGTGATGCATGTG+CGG | 0.629182 | 8_1:+79045623 | Msa1216890:CDS |
| TAACCATAAAGAATCTCACC+TGG | 0.646025 | 8_1:+79046837 | Msa1216890:three_prime_UTR |
| GACATTGATGATTCTATGAG+TGG | 0.646804 | 8_1:+79044175 | Msa1216890:CDS |
| AAGACAATGAACCTCATACC+CGG | 0.647246 | 8_1:-79046686 | None:intergenic |
| ATGGTGATCCTCCGAGATTG+TGG | 0.650626 | 8_1:+79044449 | Msa1216890:CDS |
| TGGGGATCGGATTATTGCGG+AGG | 0.654548 | 8_1:+79044285 | Msa1216890:CDS |
| GGTAACGAAGAGAGTTGGGA+TGG | 0.656385 | 8_1:+79044430 | Msa1216890:CDS |
| TGATTCTATGAGTGGTACAA+CGG | 0.665201 | 8_1:+79044183 | Msa1216890:CDS |
| TGTGTGAAATCTTTGGATGG+CGG | 0.665816 | 8_1:+79043782 | Msa1216890:CDS |
| GGAGAAACTACAAGGAGACC+TGG | 0.666616 | 8_1:-79046570 | None:intergenic |
| ATCTGGAGTTCAATTAAGTG+AGG | 0.669700 | 8_1:+79046252 | Msa1216890:CDS |
| TTTACAGGGAACAAAGAGAG+GGG | 0.669983 | 8_1:+79046532 | Msa1216890:intron |
| CCTTCAAAGAAGAGAAACAG+AGG | 0.673946 | 8_1:-79043276 | None:intergenic |
| TGGTGTGGTTGCAACTCCAG+AGG | 0.684152 | 8_1:+79044540 | Msa1216890:CDS |
| TATACCTTTCTCACACTGCG+AGG | 0.685306 | 8_1:+79043905 | Msa1216890:CDS |
| ATAGCCGCACATGCATCACG+AGG | 0.723344 | 8_1:-79045627 | None:intergenic |
| ATTGGCGGAGACAATTGGTG+TGG | 0.737589 | 8_1:+79044525 | Msa1216890:CDS |
| TTTGGGAACCACAATCTCGG+AGG | 0.737719 | 8_1:-79044457 | None:intergenic |
| GATCCAAATATCCAACACTG+GGG | 0.772205 | 8_1:+79044409 | Msa1216890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCAATTATAAAGTAAAAT+TGG | - | chr8_1:79045122-79045141 | None:intergenic | 10.0% |
| !!! | TTTTAGATTTGTATTATTAA+TGG | + | chr8_1:79045821-79045840 | Msa1216890:intron | 10.0% |
| !!! | CAATATATAATTTCTATTTT+TGG | - | chr8_1:79045972-79045991 | None:intergenic | 10.0% |
| !! | CAAAAATAGAAATTATATAT+TGG | + | chr8_1:79045970-79045989 | Msa1216890:intron | 10.0% |
| !! | ATTTCTAATAAGTAGATAAT+AGG | - | chr8_1:79044927-79044946 | None:intergenic | 15.0% |
| !! | ATTATAAAGTAAAATTGGAA+TGG | - | chr8_1:79045117-79045136 | None:intergenic | 15.0% |
| !! | AAGTTAATACAAATGATAAA+TGG | - | chr8_1:79045332-79045351 | None:intergenic | 15.0% |
| !!! | TTATCATTTGTATTAACTTT+TGG | + | chr8_1:79045333-79045352 | Msa1216890:intron | 15.0% |
| !!! | TATTTTATATTGTTTGATCA+TGG | + | chr8_1:79046473-79046492 | Msa1216890:intron | 15.0% |
| !!! | AATTTGATCCTTTTGAAATT+GGG | - | chr8_1:79043605-79043624 | None:intergenic | 20.0% |
| !!! | AAATTTGATCCTTTTGAAAT+TGG | - | chr8_1:79043606-79043625 | None:intergenic | 20.0% |
| !! | AATTTCAAAAGGATCAAATT+TGG | + | chr8_1:79043605-79043624 | Msa1216890:five_prime_UTR | 20.0% |
| !! | ATTGAAAAAAACAACTTTAC+AGG | - | chr8_1:79043658-79043677 | None:intergenic | 20.0% |
| !!! | GAAGAAAAATCTTTACATTT+TGG | + | chr8_1:79044801-79044820 | Msa1216890:intron | 20.0% |
| !! | ATATATATATATATCCCCAT+GGG | + | chr8_1:79045139-79045158 | Msa1216890:intron | 20.0% |
| !!! | CTAAAATTTTAAAACAAGCT+TGG | - | chr8_1:79045807-79045826 | None:intergenic | 20.0% |
| !! | AAAAAAATTCCTAAAGTCTA+TGG | - | chr8_1:79045921-79045940 | None:intergenic | 20.0% |
| !!! | TCAATAAATACTTGCTATTT+GGG | + | chr8_1:79046038-79046057 | Msa1216890:intron | 20.0% |
| !!! | AAGTAACTAGAATTTTCTTT+TGG | - | chr8_1:79046778-79046797 | None:intergenic | 20.0% |
| !! | AGCAAACAATAATTAAAAAC+TGG | + | chr8_1:79046934-79046953 | Msa1216890:three_prime_UTR | 20.0% |
| !! | GCAAACAATAATTAAAAACT+GGG | + | chr8_1:79046935-79046954 | Msa1216890:three_prime_UTR | 20.0% |
| !! | TTTGATAGCAACAAACAAAT+GGG | - | chr8_1:79043526-79043545 | None:intergenic | 25.0% |
| !! | ATTTGATAGCAACAAACAAA+TGG | - | chr8_1:79043527-79043546 | None:intergenic | 25.0% |
| !! | AAGTTGCTAATTTTGTAACT+AGG | + | chr8_1:79043565-79043584 | Msa1216890:five_prime_UTR | 25.0% |
| !! | AGTTGCTAATTTTGTAACTA+GGG | + | chr8_1:79043566-79043585 | Msa1216890:five_prime_UTR | 25.0% |
| ! | AGTATAGTATAGTATAGCAT+AGG | + | chr8_1:79043714-79043733 | Msa1216890:five_prime_UTR | 25.0% |
| !!! | ATTTCTTTGGTGTTTTTGAT+GGG | + | chr8_1:79044008-79044027 | Msa1216890:CDS | 25.0% |
| ! | AAACTTTGTTAGAGATAGTT+TGG | + | chr8_1:79044057-79044076 | Msa1216890:CDS | 25.0% |
| ! | ACAATAAAGAAGAGATGATT+AGG | - | chr8_1:79044586-79044605 | None:intergenic | 25.0% |
| ! | CTAGAAAAAAAAACTAAGAG+AGG | - | chr8_1:79044674-79044693 | None:intergenic | 25.0% |
| ! | CATTTAGATAATATCATCGT+AGG | + | chr8_1:79044872-79044891 | Msa1216890:intron | 25.0% |
| ! | GCAATTATGTTAATGGTTTA+TGG | + | chr8_1:79045027-79045046 | Msa1216890:intron | 25.0% |
| ! | GTTAATGGTTTATGGTTATT+CGG | + | chr8_1:79045035-79045054 | Msa1216890:intron | 25.0% |
| ! | GATATATATATATATCCCCA+TGG | + | chr8_1:79045138-79045157 | Msa1216890:intron | 25.0% |
| ! | TATATATATATATCCCCATG+GGG | + | chr8_1:79045140-79045159 | Msa1216890:intron | 25.0% |
| ! | GTAATATACAAACATAGGTT+AGG | + | chr8_1:79045162-79045181 | Msa1216890:intron | 25.0% |
| ! | AATTGTTTGTCACAATCATA+TGG | + | chr8_1:79045261-79045280 | Msa1216890:intron | 25.0% |
| ! | ATTGTTTGTCACAATCATAT+GGG | + | chr8_1:79045262-79045281 | Msa1216890:intron | 25.0% |
| ! | TAACTTCCAATTAAACGAAT+TGG | - | chr8_1:79045410-79045429 | None:intergenic | 25.0% |
| !!! | TGTGTTTTATTTGATTCTGT+AGG | + | chr8_1:79045587-79045606 | Msa1216890:intron | 25.0% |
| ! | ATTATCATTGTCCAGATTAA+AGG | + | chr8_1:79045708-79045727 | Msa1216890:CDS | 25.0% |
| !! | TAAAAGGAAAATGGTAATGA+AGG | - | chr8_1:79045772-79045791 | None:intergenic | 25.0% |
| ! | AACTACACATAAAAGGAAAA+TGG | - | chr8_1:79045781-79045800 | None:intergenic | 25.0% |
| !!! | GATAATACCTTGTTTTTCAT+GGG | - | chr8_1:79045857-79045876 | None:intergenic | 25.0% |
| !!! | CTCAATAAATACTTGCTATT+TGG | + | chr8_1:79046037-79046056 | Msa1216890:intron | 25.0% |
| !!! | CAATAAATACTTGCTATTTG+GGG | + | chr8_1:79046039-79046058 | Msa1216890:intron | 25.0% |
| !! | CTCTACATGTTTTTCTTTTT+GGG | - | chr8_1:79046105-79046124 | None:intergenic | 25.0% |
| ! | AATTTGAATCAACTCATCAT+TGG | + | chr8_1:79046184-79046203 | Msa1216890:intron | 25.0% |
| ! | ATGATAAACATCAAATTCAG+TGG | - | chr8_1:79046332-79046351 | None:intergenic | 25.0% |
| ! | ACTATATATTTGGTTGTTCA+AGG | + | chr8_1:79046660-79046679 | Msa1216890:three_prime_UTR | 25.0% |
| ! | TAATTTCTACTTTCTGAACA+AGG | - | chr8_1:79046727-79046746 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTCTTTCCAGAGA+GGG | - | chr8_1:79046812-79046831 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTTCTTTCCAGAG+AGG | - | chr8_1:79046813-79046832 | None:intergenic | 25.0% |
| AAAAAAGTAGTACCTTTCGT+GGG | - | chr8_1:79043317-79043336 | None:intergenic | 30.0% | |
| AAAAAAAGTAGTACCTTTCG+TGG | - | chr8_1:79043318-79043337 | None:intergenic | 30.0% | |
| !! | GTAGAAACTGTTTGATTTTG+GGG | - | chr8_1:79043409-79043428 | None:intergenic | 30.0% |
| !! | GGTAGAAACTGTTTGATTTT+GGG | - | chr8_1:79043410-79043429 | None:intergenic | 30.0% |
| GAAAAAAAAAGAACCCTAGT+AGG | - | chr8_1:79043443-79043462 | None:intergenic | 30.0% | |
| ! | TTGATAGCAACAAACAAATG+GGG | - | chr8_1:79043525-79043544 | None:intergenic | 30.0% |
| ACATGATACCCAATTTCAAA+AGG | + | chr8_1:79043594-79043613 | Msa1216890:five_prime_UTR | 30.0% | |
| ! | AATTTGGAGTTACAATGCAA+AGG | + | chr8_1:79043621-79043640 | Msa1216890:five_prime_UTR | 30.0% |
| ! | ATATCACCTGTTTGAAACAT+GGG | + | chr8_1:79043737-79043756 | Msa1216890:exon | 30.0% |
| ! | ACCAAGATAGTTTTTGCATT+AGG | + | chr8_1:79043957-79043976 | Msa1216890:CDS | 30.0% |
| TCCTAATGCAAAAACTATCT+TGG | - | chr8_1:79043961-79043980 | None:intergenic | 30.0% | |
| ! | AGATAGTTTTTGCATTAGGA+CGG | + | chr8_1:79043961-79043980 | Msa1216890:CDS | 30.0% |
| ACACCAAAGAAATGGATATT+CGG | - | chr8_1:79044001-79044020 | None:intergenic | 30.0% | |
| CATCAAAAACACCAAAGAAA+TGG | - | chr8_1:79044009-79044028 | None:intergenic | 30.0% | |
| !!! | CATTTCTTTGGTGTTTTTGA+TGG | + | chr8_1:79044007-79044026 | Msa1216890:CDS | 30.0% |
| ACCAACATTAGCAACATAAA+GGG | - | chr8_1:79044236-79044255 | None:intergenic | 30.0% | |
| TTCTTTATTGTTGCTAGTGA+TGG | + | chr8_1:79044595-79044614 | Msa1216890:CDS | 30.0% | |
| ATACCATATCAACAACAGTT+TGG | - | chr8_1:79044642-79044661 | None:intergenic | 30.0% | |
| !! | TTACATTTTGGCCACAATTA+TGG | + | chr8_1:79044813-79044832 | Msa1216890:intron | 30.0% |
| GAAATCGTATCATCTATCAA+TGG | + | chr8_1:79044942-79044961 | Msa1216890:intron | 30.0% | |
| !! | AAGACTTTGACTTGAAAATC+AGG | + | chr8_1:79044982-79045001 | Msa1216890:intron | 30.0% |
| TCTGTGTGCAATTATGTTAA+TGG | + | chr8_1:79045020-79045039 | Msa1216890:intron | 30.0% | |
| ATGTTTGTATATTACCCCAT+GGG | - | chr8_1:79045157-79045176 | None:intergenic | 30.0% | |
| TATGTTTGTATATTACCCCA+TGG | - | chr8_1:79045158-79045177 | None:intergenic | 30.0% | |
| ATGGGGTAATATACAAACAT+AGG | + | chr8_1:79045157-79045176 | Msa1216890:intron | 30.0% | |
| ! | TTCCTTGTTTAGCATAACTA+TGG | + | chr8_1:79045185-79045204 | Msa1216890:intron | 30.0% |
| AACCATAGTTATGCTAAACA+AGG | - | chr8_1:79045190-79045209 | None:intergenic | 30.0% | |
| ATAACTATGGTTCATTTACC+AGG | + | chr8_1:79045198-79045217 | Msa1216890:intron | 30.0% | |
| ATTATATTTGCACAACTACC+TGG | - | chr8_1:79045219-79045238 | None:intergenic | 30.0% | |
| CCTAATTAACAGATGGAATT+TGG | - | chr8_1:79045304-79045323 | None:intergenic | 30.0% | |
| CCAAATTCCATCTGTTAATT+AGG | + | chr8_1:79045301-79045320 | Msa1216890:intron | 30.0% | |
| CAATTAAACGAATTGGCAAT+TGG | - | chr8_1:79045403-79045422 | None:intergenic | 30.0% | |
| CAATTGCCAATTCGTTTAAT+TGG | + | chr8_1:79045401-79045420 | Msa1216890:intron | 30.0% | |
| !!! | ACTGTGTAGAATTTTAACTC+TGG | + | chr8_1:79045537-79045556 | Msa1216890:intron | 30.0% |
| ACATTCATCAAGATATGAAG+GGG | - | chr8_1:79045570-79045589 | None:intergenic | 30.0% | |
| CACATTCATCAAGATATGAA+GGG | - | chr8_1:79045571-79045590 | None:intergenic | 30.0% | |
| ACACATTCATCAAGATATGA+AGG | - | chr8_1:79045572-79045591 | None:intergenic | 30.0% | |
| CTGAAGAGTCATATAAACTA+TGG | + | chr8_1:79045652-79045671 | Msa1216890:CDS | 30.0% | |
| AGAGTCATATAAACTATGGT+CGG | + | chr8_1:79045656-79045675 | Msa1216890:CDS | 30.0% | |
| TATTAGAGAGTCCTTTAATC+TGG | - | chr8_1:79045722-79045741 | None:intergenic | 30.0% | |
| AAGGACTCTCTAATAATGTA+TGG | + | chr8_1:79045727-79045746 | Msa1216890:intron | 30.0% | |
| TTGGAGAAACTACACATAAA+AGG | - | chr8_1:79045788-79045807 | None:intergenic | 30.0% | |
| TTCTTATCCCATGAAAAACA+AGG | + | chr8_1:79045847-79045866 | Msa1216890:intron | 30.0% | |
| !!! | GGATAATACCTTGTTTTTCA+TGG | - | chr8_1:79045858-79045877 | None:intergenic | 30.0% |
| ! | AAGGTATTATCCCATCAAAT+GGG | + | chr8_1:79045866-79045885 | Msa1216890:intron | 30.0% |
| TAATTCACTCCATAGACTTT+AGG | + | chr8_1:79045909-79045928 | Msa1216890:intron | 30.0% | |
| ! | GCTCTACATGTTTTTCTTTT+TGG | - | chr8_1:79046106-79046125 | None:intergenic | 30.0% |
| CAAAATCAAAATCTTGCTAC+TGG | + | chr8_1:79046152-79046171 | Msa1216890:intron | 30.0% | |
| TTATTCAACTCATCTTTGAC+TGG | - | chr8_1:79046390-79046409 | None:intergenic | 30.0% | |
| GTAAAGAAAATAGGAGGAAA+AGG | - | chr8_1:79046517-79046536 | None:intergenic | 30.0% | |
| ! | TTTCCTCCTATTTTCTTTAC+AGG | + | chr8_1:79046517-79046536 | Msa1216890:intron | 30.0% |
| ! | TTCCTCCTATTTTCTTTACA+GGG | + | chr8_1:79046518-79046537 | Msa1216890:intron | 30.0% |
| TTGTTCCCTGTAAAGAAAAT+AGG | - | chr8_1:79046526-79046545 | None:intergenic | 30.0% | |
| AACATAGAAATGTACCACTT+AGG | - | chr8_1:79046594-79046613 | None:intergenic | 30.0% | |
| TTTACCGGTCACTATATATT+TGG | + | chr8_1:79046650-79046669 | Msa1216890:three_prime_UTR | 30.0% | |
| ACAACCAAATATATAGTGAC+CGG | - | chr8_1:79046657-79046676 | None:intergenic | 30.0% | |
| CAGAAAGTAGAAATTAGAGT+TGG | + | chr8_1:79046731-79046750 | Msa1216890:three_prime_UTR | 30.0% | |
| GATACAATAAAACATTCTCC+AGG | - | chr8_1:79046858-79046877 | None:intergenic | 30.0% | |
| !!! | AATTTTGGAATGAGAGAGAC+AGG | - | chr8_1:79043199-79043218 | None:intergenic | 35.0% |
| !! | CAAGTTGACGTGAAGAATTT+TGG | - | chr8_1:79043214-79043233 | None:intergenic | 35.0% |
| TTGACTCTTCCTTCTTCATT+AGG | + | chr8_1:79043238-79043257 | Msa1216890:five_prime_UTR | 35.0% | |
| TGACTCTTCCTTCTTCATTA+GGG | + | chr8_1:79043239-79043258 | Msa1216890:five_prime_UTR | 35.0% | |
| AAGGAAAACCCTAATGAAGA+AGG | - | chr8_1:79043250-79043269 | None:intergenic | 35.0% | |
| AAAAAGTAGTACCTTTCGTG+GGG | - | chr8_1:79043316-79043335 | None:intergenic | 35.0% | |
| GAAAATGCAATGAAGGTTCT+AGG | - | chr8_1:79043349-79043368 | None:intergenic | 35.0% | |
| CAGACAAGAAAATGCAATGA+AGG | - | chr8_1:79043356-79043375 | None:intergenic | 35.0% | |
| ! | TTTGAGAAAAAGGTGCAAGT+GGG | - | chr8_1:79043382-79043401 | None:intergenic | 35.0% |
| !! | GGGTAGAAACTGTTTGATTT+TGG | - | chr8_1:79043411-79043430 | None:intergenic | 35.0% |
| !!! | TACCCTTTTTTCTACCTACT+AGG | + | chr8_1:79043426-79043445 | Msa1216890:five_prime_UTR | 35.0% |
| !!! | ACCCTTTTTTCTACCTACTA+GGG | + | chr8_1:79043427-79043446 | Msa1216890:five_prime_UTR | 35.0% |
| ACCCTAGTAGGTAGAAAAAA+GGG | - | chr8_1:79043431-79043450 | None:intergenic | 35.0% | |
| AACCCTAGTAGGTAGAAAAA+AGG | - | chr8_1:79043432-79043451 | None:intergenic | 35.0% | |
| ATTTGAGCTCAATAGGTAGA+AGG | - | chr8_1:79043465-79043484 | None:intergenic | 35.0% | |
| GAGTCAAATTTGAGCTCAAT+AGG | - | chr8_1:79043472-79043491 | None:intergenic | 35.0% | |
| ! | GATATCACCTGTTTGAAACA+TGG | + | chr8_1:79043736-79043755 | Msa1216890:exon | 35.0% |
| ATGTTGCTGTGTGAAATCTT+TGG | + | chr8_1:79043775-79043794 | Msa1216890:CDS | 35.0% | |
| TTGGTTATCATCATAGCCAT+AGG | + | chr8_1:79043816-79043835 | Msa1216890:CDS | 35.0% | |
| !! | TCCTTCACACAACTTTGTTT+TGG | + | chr8_1:79043880-79043899 | Msa1216890:CDS | 35.0% |
| TCCAAAACAAAGTTGTGTGA+AGG | - | chr8_1:79043884-79043903 | None:intergenic | 35.0% | |
| AACCCGAATATCCATTTCTT+TGG | + | chr8_1:79043995-79044014 | Msa1216890:CDS | 35.0% | |
| CACCAAAGAAATGGATATTC+GGG | - | chr8_1:79044000-79044019 | None:intergenic | 35.0% | |
| ! | GACATTGATGATTCTATGAG+TGG | + | chr8_1:79044175-79044194 | Msa1216890:CDS | 35.0% |
| TGATTCTATGAGTGGTACAA+CGG | + | chr8_1:79044183-79044202 | Msa1216890:CDS | 35.0% | |
| ACCCTTTATGTTGCTAATGT+TGG | + | chr8_1:79044232-79044251 | Msa1216890:CDS | 35.0% | |
| CACCAACATTAGCAACATAA+AGG | - | chr8_1:79044237-79044256 | None:intergenic | 35.0% | |
| ACTGCATTTACAAGGAGTTT+AGG | + | chr8_1:79044496-79044515 | Msa1216890:CDS | 35.0% | |
| CTGCATTTACAAGGAGTTTA+GGG | + | chr8_1:79044497-79044516 | Msa1216890:CDS | 35.0% | |
| TGCATTTACAAGGAGTTTAG+GGG | + | chr8_1:79044498-79044517 | Msa1216890:CDS | 35.0% | |
| AAGCCAAACTGTTGTTGATA+TGG | + | chr8_1:79044636-79044655 | Msa1216890:CDS | 35.0% | |
| GTTGATATTGTGAATGACTG+TGG | + | chr8_1:79044733-79044752 | Msa1216890:intron | 35.0% | |
| ! | TTTGGCCACAATTATGGTTT+TGG | + | chr8_1:79044819-79044838 | Msa1216890:intron | 35.0% |
| AATTGGAATGGTATTTCGCT+TGG | - | chr8_1:79045105-79045124 | None:intergenic | 35.0% | |
| TGTTTGTATATTACCCCATG+GGG | - | chr8_1:79045156-79045175 | None:intergenic | 35.0% | |
| GGATAGACCTAATTAACAGA+TGG | - | chr8_1:79045311-79045330 | None:intergenic | 35.0% | |
| !!! | TGTAGAATTTTAACTCTGGC+AGG | + | chr8_1:79045541-79045560 | Msa1216890:intron | 35.0% |
| ! | CAAGGTATTATCCCATCAAA+TGG | + | chr8_1:79045865-79045884 | Msa1216890:intron | 35.0% |
| AGGTATTATCCCATCAAATG+GGG | + | chr8_1:79045867-79045886 | Msa1216890:intron | 35.0% | |
| AATCCTTAACATGTGTCCTT+AGG | + | chr8_1:79046062-79046081 | Msa1216890:intron | 35.0% | |
| ATCCTTAACATGTGTCCTTA+GGG | + | chr8_1:79046063-79046082 | Msa1216890:intron | 35.0% | |
| ! | ATCTGGAGTTCAATTAAGTG+AGG | + | chr8_1:79046252-79046271 | Msa1216890:CDS | 35.0% |
| CAATTAAGTGAGGTCAATGT+CGG | + | chr8_1:79046262-79046281 | Msa1216890:CDS | 35.0% | |
| TTCCCTGTAAAGAAAATAGG+AGG | - | chr8_1:79046523-79046542 | None:intergenic | 35.0% | |
| TGCAAAAGACTCAGAAAAGT+TGG | - | chr8_1:79046617-79046636 | None:intergenic | 35.0% | |
| !!! | TCTTTTGGTTTCATGTGTCT+TGG | - | chr8_1:79046763-79046782 | None:intergenic | 35.0% |
| TAACCATAAAGAATCTCACC+TGG | + | chr8_1:79046837-79046856 | Msa1216890:three_prime_UTR | 35.0% | |
| AGAGAAACAGAGGAACATGA+AGG | - | chr8_1:79043269-79043288 | None:intergenic | 40.0% | |
| CCTTCAAAGAAGAGAAACAG+AGG | - | chr8_1:79043279-79043298 | None:intergenic | 40.0% | |
| ! | CCTCTGTTTCTCTTCTTTGA+AGG | + | chr8_1:79043276-79043295 | Msa1216890:five_prime_UTR | 40.0% |
| ! | CTTTGAGAAAAAGGTGCAAG+TGG | - | chr8_1:79043383-79043402 | None:intergenic | 40.0% |
| ! | TTGGGGTGACTTTGAGAAAA+AGG | - | chr8_1:79043392-79043411 | None:intergenic | 40.0% |
| ACACAACCCATGTTTCAAAC+AGG | - | chr8_1:79043746-79043765 | None:intergenic | 40.0% | |
| ! | TGAAACATGGGTTGTGTTCA+TGG | + | chr8_1:79043749-79043768 | Msa1216890:exon | 40.0% |
| TGCTGTGTGAAATCTTTGGA+TGG | + | chr8_1:79043779-79043798 | Msa1216890:CDS | 40.0% | |
| TGTGTGAAATCTTTGGATGG+CGG | + | chr8_1:79043782-79043801 | Msa1216890:CDS | 40.0% | |
| GAGCTTGTATGTTCTTCCTA+TGG | - | chr8_1:79043835-79043854 | None:intergenic | 40.0% | |
| TTTGCTTATCCAGCGAATCA+GGG | - | chr8_1:79043937-79043956 | None:intergenic | 40.0% | |
| ! | TTTTGCTTATCCAGCGAATC+AGG | - | chr8_1:79043938-79043957 | None:intergenic | 40.0% |
| TGCATTAGGACGGAAATTCA+AGG | + | chr8_1:79043971-79043990 | Msa1216890:CDS | 40.0% | |
| !!! | TTTGGTGTTTTTGATGGGCA+TGG | + | chr8_1:79044013-79044032 | Msa1216890:CDS | 40.0% |
| ! | TTTGATGGGCATGGTCAATT+TGG | + | chr8_1:79044022-79044041 | Msa1216890:CDS | 40.0% |
| GTTATCTAACGACCCTGAAT+TGG | + | chr8_1:79044087-79044106 | Msa1216890:CDS | 40.0% | |
| AGCTTACAATTCTGCGTTCT+CGG | + | chr8_1:79044126-79044145 | Msa1216890:CDS | 40.0% | |
| !! | GCTATTACAGTGCTTGTTGT+TGG | + | chr8_1:79044205-79044224 | Msa1216890:CDS | 40.0% |
| AGAGCTGTGATAGCTGTTAA+GGG | + | chr8_1:79044262-79044281 | Msa1216890:CDS | 40.0% | |
| TCGTATTCATCTCTCCGAAA+TGG | - | chr8_1:79044331-79044350 | None:intergenic | 40.0% | |
| TACGAGAGAGTGAAACTTTG+TGG | + | chr8_1:79044346-79044365 | Msa1216890:CDS | 40.0% | |
| AGTGAAACTTTGTGGAGCAA+GGG | + | chr8_1:79044354-79044373 | Msa1216890:CDS | 40.0% | |
| !!! | GGTTTTGAGTGTTGATCAAG+TGG | + | chr8_1:79044375-79044394 | Msa1216890:CDS | 40.0% |
| !! | TTGAGTGTTGATCAAGTGGA+AGG | + | chr8_1:79044379-79044398 | Msa1216890:CDS | 40.0% |
| !! | TGAGTGTTGATCAAGTGGAA+GGG | + | chr8_1:79044380-79044399 | Msa1216890:CDS | 40.0% |
| TGATCAAGTGGAAGGGATTA+AGG | + | chr8_1:79044387-79044406 | Msa1216890:CDS | 40.0% | |
| AGGATCCAAATATCCAACAC+TGG | + | chr8_1:79044407-79044426 | Msa1216890:CDS | 40.0% | |
| GGATCCAAATATCCAACACT+GGG | + | chr8_1:79044408-79044427 | Msa1216890:CDS | 40.0% | |
| GATCCAAATATCCAACACTG+GGG | + | chr8_1:79044409-79044428 | Msa1216890:CDS | 40.0% | |
| ! | TTACCCCAGTGTTGGATATT+TGG | - | chr8_1:79044415-79044434 | None:intergenic | 40.0% |
| TTCCAGGAAACATCCCATTT+GGG | - | chr8_1:79044477-79044496 | None:intergenic | 40.0% | |
| TTCCTGGAACTGCATTTACA+AGG | + | chr8_1:79044488-79044507 | Msa1216890:CDS | 40.0% | |
| AAGGAGTTTAGGGGATAGAT+TGG | + | chr8_1:79044507-79044526 | Msa1216890:CDS | 40.0% | |
| TTGTGAATGACTGTGGACAA+AGG | + | chr8_1:79044740-79044759 | Msa1216890:intron | 40.0% | |
| TGTCTGATGCTGCCAAATTA+TGG | + | chr8_1:79044763-79044782 | Msa1216890:intron | 40.0% | |
| GCAGTCCAAAACCATAATTG+TGG | - | chr8_1:79044827-79044846 | None:intergenic | 40.0% | |
| !! | TACAGTATTGCAACGGGTTA+GGG | - | chr8_1:79045482-79045501 | None:intergenic | 40.0% |
| AGTGTCTACAGTATTGCAAC+GGG | - | chr8_1:79045488-79045507 | None:intergenic | 40.0% | |
| CAGTGTCTACAGTATTGCAA+CGG | - | chr8_1:79045489-79045508 | None:intergenic | 40.0% | |
| TTCTACACAGTAATGCAGCA+GGG | - | chr8_1:79045528-79045547 | None:intergenic | 40.0% | |
| ATTCTACACAGTAATGCAGC+AGG | - | chr8_1:79045529-79045548 | None:intergenic | 40.0% | |
| ACATTGTAGTCAAGCACATC+TGG | + | chr8_1:79046235-79046254 | Msa1216890:intron | 40.0% | |
| TCTTTACAGGGAACAAAGAG+AGG | + | chr8_1:79046530-79046549 | Msa1216890:intron | 40.0% | |
| CTTTACAGGGAACAAAGAGA+GGG | + | chr8_1:79046531-79046550 | Msa1216890:intron | 40.0% | |
| TTTACAGGGAACAAAGAGAG+GGG | + | chr8_1:79046532-79046551 | Msa1216890:intron | 40.0% | |
| ! | GAACAAAGAGAGGGGTTTTA+CGG | + | chr8_1:79046540-79046559 | Msa1216890:three_prime_UTR | 40.0% |
| TCCTTGTAGTTTCTCCTAAG+TGG | + | chr8_1:79046577-79046596 | Msa1216890:three_prime_UTR | 40.0% | |
| ACCACTTAGGAGAAACTACA+AGG | - | chr8_1:79046581-79046600 | None:intergenic | 40.0% | |
| CATTGCTCCTGTACATTTAC+CGG | + | chr8_1:79046635-79046654 | Msa1216890:three_prime_UTR | 40.0% | |
| ATAGTGACCGGTAAATGTAC+AGG | - | chr8_1:79046645-79046664 | None:intergenic | 40.0% | |
| AAGACAATGAACCTCATACC+CGG | - | chr8_1:79046689-79046708 | None:intergenic | 40.0% | |
| CATTGTCTTGGCAGCAAAAA+TGG | + | chr8_1:79046700-79046719 | Msa1216890:three_prime_UTR | 40.0% | |
| ! | TTTTCTTTCCAGAGAGGGTA+TGG | - | chr8_1:79046807-79046826 | None:intergenic | 40.0% |
| TCTCCAGGTGAGATTCTTTA+TGG | - | chr8_1:79046843-79046862 | None:intergenic | 40.0% | |
| AATGAGAGAGACAGGAGAAG+TGG | - | chr8_1:79043191-79043210 | None:intergenic | 45.0% | |
| TATACCTTTCTCACACTGCG+AGG | + | chr8_1:79043905-79043924 | Msa1216890:CDS | 45.0% | |
| TAACGACCCTGAATTGGTGA+AGG | + | chr8_1:79044093-79044112 | Msa1216890:CDS | 45.0% | |
| CAGGATCCTTCACCAATTCA+GGG | - | chr8_1:79044102-79044121 | None:intergenic | 45.0% | |
| ACAGGATCCTTCACCAATTC+AGG | - | chr8_1:79044103-79044122 | None:intergenic | 45.0% | |
| GCAGAATTGTAAGCTCGAAC+AGG | - | chr8_1:79044121-79044140 | None:intergenic | 45.0% | |
| GAGAGCTGTGATAGCTGTTA+AGG | + | chr8_1:79044261-79044280 | Msa1216890:CDS | 45.0% | |
| CTGTGATAGCTGTTAAGGGT+GGG | + | chr8_1:79044266-79044285 | Msa1216890:CDS | 45.0% | |
| TGTGATAGCTGTTAAGGGTG+GGG | + | chr8_1:79044267-79044286 | Msa1216890:CDS | 45.0% | |
| CCTCTGATCAGACACCATTT+CGG | + | chr8_1:79044314-79044333 | Msa1216890:CDS | 45.0% | |
| GAGTGAAACTTTGTGGAGCA+AGG | + | chr8_1:79044353-79044372 | Msa1216890:CDS | 45.0% | |
| CCATTTGGGAACCACAATCT+CGG | - | chr8_1:79044463-79044482 | None:intergenic | 45.0% | |
| CGAGATTGTGGTTCCCAAAT+GGG | + | chr8_1:79044461-79044480 | Msa1216890:CDS | 45.0% | |
| TTCCCAAATGGGATGTTTCC+TGG | + | chr8_1:79044472-79044491 | Msa1216890:CDS | 45.0% | |
| GTTCCAGGAAACATCCCATT+TGG | - | chr8_1:79044478-79044497 | None:intergenic | 45.0% | |
| CTCCTTGTAAATGCAGTTCC+AGG | - | chr8_1:79044493-79044512 | None:intergenic | 45.0% | |
| GAGTTTAGGGGATAGATTGG+CGG | + | chr8_1:79044510-79044529 | Msa1216890:CDS | 45.0% | |
| GATAGATTGGCGGAGACAAT+TGG | + | chr8_1:79044520-79044539 | Msa1216890:CDS | 45.0% | |
| AGCTGAACTATTGACACCTC+TGG | - | chr8_1:79044559-79044578 | None:intergenic | 45.0% | |
| ATGCTGCCAAATTATGGCTG+TGG | + | chr8_1:79044769-79044788 | Msa1216890:intron | 45.0% | |
| ACCACACCACAGCCATAATT+TGG | - | chr8_1:79044778-79044797 | None:intergenic | 45.0% | |
| ! | CTACAGTATTGCAACGGGTT+AGG | - | chr8_1:79045483-79045502 | None:intergenic | 45.0% |
| TTATCCCATCAAATGGGGTC+AGG | + | chr8_1:79045872-79045891 | Msa1216890:intron | 45.0% | |
| TATCCCATCAAATGGGGTCA+GGG | + | chr8_1:79045873-79045892 | Msa1216890:intron | 45.0% | |
| AGCCCTAAGGACACATGTTA+AGG | - | chr8_1:79046068-79046087 | None:intergenic | 45.0% | |
| CAATGCTAACATGAGCCCTA+AGG | - | chr8_1:79046081-79046100 | None:intergenic | 45.0% | |
| CTTAGGGCTCATGTTAGCAT+TGG | + | chr8_1:79046079-79046098 | Msa1216890:intron | 45.0% | |
| TCAACTCATCTTTGACTGGC+AGG | - | chr8_1:79046386-79046405 | None:intergenic | 45.0% | |
| ATTTGGTTGTTCAAGGCAGC+CGG | + | chr8_1:79046667-79046686 | Msa1216890:three_prime_UTR | 45.0% | |
| GGGTATGAGGTTCATTGTCT+TGG | + | chr8_1:79046688-79046707 | Msa1216890:three_prime_UTR | 45.0% | |
| TTGTTTAGCCATACCCTCTC+TGG | + | chr8_1:79046796-79046815 | Msa1216890:three_prime_UTR | 45.0% | |
| !!! | TAATACATAATTTTTTTTAT+TGG | - | chr8_1:79045949-79045968 | None:intergenic | 5.0% |
| AGTAGTACCTTTCGTGGGGT+GGG | - | chr8_1:79043312-79043331 | None:intergenic | 50.0% | |
| AAGTAGTACCTTTCGTGGGG+TGG | - | chr8_1:79043313-79043332 | None:intergenic | 50.0% | |
| !! | GATGGCGGCTCTAGAAAACT+TGG | + | chr8_1:79043797-79043816 | Msa1216890:CDS | 50.0% |
| GTAACCTCGCAGTGTGAGAA+AGG | - | chr8_1:79043912-79043931 | None:intergenic | 50.0% | |
| ! | AGGTTACTACCCTGATTCGC+TGG | + | chr8_1:79043925-79043944 | Msa1216890:CDS | 50.0% |
| GCTGTGATAGCTGTTAAGGG+TGG | + | chr8_1:79044265-79044284 | Msa1216890:CDS | 50.0% | |
| TAGCTGTTAAGGGTGGGGAT+CGG | + | chr8_1:79044272-79044291 | Msa1216890:CDS | 50.0% | |
| CCGAAATGGTGTCTGATCAG+AGG | - | chr8_1:79044317-79044336 | None:intergenic | 50.0% | |
| TCTCTTCGTTACCCCAGTGT+TGG | - | chr8_1:79044423-79044442 | None:intergenic | 50.0% | |
| ACTGGGGTAACGAAGAGAGT+TGG | + | chr8_1:79044425-79044444 | Msa1216890:CDS | 50.0% | |
| CTGGGGTAACGAAGAGAGTT+GGG | + | chr8_1:79044426-79044445 | Msa1216890:CDS | 50.0% | |
| GGTAACGAAGAGAGTTGGGA+TGG | + | chr8_1:79044430-79044449 | Msa1216890:CDS | 50.0% | |
| ATGGTGATCCTCCGAGATTG+TGG | + | chr8_1:79044449-79044468 | Msa1216890:CDS | 50.0% | |
| TTTGGGAACCACAATCTCGG+AGG | - | chr8_1:79044460-79044479 | None:intergenic | 50.0% | |
| CCGAGATTGTGGTTCCCAAA+TGG | + | chr8_1:79044460-79044479 | Msa1216890:CDS | 50.0% | |
| ATTGGCGGAGACAATTGGTG+TGG | + | chr8_1:79044525-79044544 | Msa1216890:CDS | 50.0% | |
| GCCAAATTATGGCTGTGGTG+TGG | + | chr8_1:79044774-79044793 | Msa1216890:intron | 50.0% | |
| AGATCCTCGTGATGCATGTG+CGG | + | chr8_1:79045623-79045642 | Msa1216890:CDS | 50.0% | |
| ATCCCATCAAATGGGGTCAG+GGG | + | chr8_1:79045874-79045893 | Msa1216890:intron | 50.0% | |
| TTCCCCTGACCCCATTTGAT+GGG | - | chr8_1:79045879-79045898 | None:intergenic | 50.0% | |
| ATTCCCCTGACCCCATTTGA+TGG | - | chr8_1:79045880-79045899 | None:intergenic | 50.0% | |
| TCGGTACTGCTATGAGAACC+AGG | + | chr8_1:79046281-79046300 | Msa1216890:CDS | 50.0% | |
| ACTGCTATGAGAACCAGGAC+AGG | + | chr8_1:79046286-79046305 | Msa1216890:CDS | 50.0% | |
| CATCTCAGAAGTTCCTGTCC+TGG | - | chr8_1:79046302-79046321 | None:intergenic | 50.0% | |
| GGAGAAACTACAAGGAGACC+TGG | - | chr8_1:79046573-79046592 | None:intergenic | 50.0% | |
| TTTGGTTGTTCAAGGCAGCC+GGG | + | chr8_1:79046668-79046687 | Msa1216890:three_prime_UTR | 50.0% | |
| GTAGTACCTTTCGTGGGGTG+GGG | - | chr8_1:79043311-79043330 | None:intergenic | 55.0% | |
| GGGTGGGGATCGGATTATTG+CGG | + | chr8_1:79044282-79044301 | Msa1216890:CDS | 55.0% | |
| TGGGGATCGGATTATTGCGG+AGG | + | chr8_1:79044285-79044304 | Msa1216890:CDS | 55.0% | |
| TGGTGTGGTTGCAACTCCAG+AGG | + | chr8_1:79044540-79044559 | Msa1216890:CDS | 55.0% | |
| ! | AAACTTGCCCTGCTTGCTGC+TGG | + | chr8_1:79045452-79045471 | Msa1216890:intron | 55.0% |
| ATAGCCGCACATGCATCACG+AGG | - | chr8_1:79045630-79045649 | None:intergenic | 55.0% | |
| ! | GGGTTTTACGGAAGCTCACC+AGG | + | chr8_1:79046552-79046571 | Msa1216890:three_prime_UTR | 55.0% |
| GGGATGACCAGCAGCAAGCA+GGG | - | chr8_1:79045462-79045481 | None:intergenic | 60.0% | |
| AGGGATGACCAGCAGCAAGC+AGG | - | chr8_1:79045463-79045482 | None:intergenic | 60.0% | |
| GTTCAAGGCAGCCGGGTATG+AGG | + | chr8_1:79046675-79046694 | Msa1216890:three_prime_UTR | 60.0% | |
| ACTGCACCCCACCCCACGAA+AGG | + | chr8_1:79043302-79043321 | Msa1216890:five_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 79043162 | 79046972 | 79043162 | ID=Msa1216890;Name=Msa1216890 |
| chr8_1 | mRNA | 79043162 | 79046972 | 79043162 | ID=Msa1216890-mRNA-1;Parent=Msa1216890;Name=Msa1216890-mRNA-1;_AED=0.03;_eAED=0.03;_QI=593|1|1|1|0.66|0.5|4|438|399 |
| chr8_1 | exon | 79043162 | 79044657 | 79043162 | ID=Msa1216890-mRNA-1:exon:27361;Parent=Msa1216890-mRNA-1 |
| chr8_1 | exon | 79045609 | 79045743 | 79045609 | ID=Msa1216890-mRNA-1:exon:27362;Parent=Msa1216890-mRNA-1 |
| chr8_1 | exon | 79046244 | 79046409 | 79046244 | ID=Msa1216890-mRNA-1:exon:27363;Parent=Msa1216890-mRNA-1 |
| chr8_1 | exon | 79046539 | 79046972 | 79046539 | ID=Msa1216890-mRNA-1:exon:27364;Parent=Msa1216890-mRNA-1 |
| chr8_1 | five_prime_UTR | 79043162 | 79043754 | 79043162 | ID=Msa1216890-mRNA-1:five_prime_utr;Parent=Msa1216890-mRNA-1 |
| chr8_1 | CDS | 79043755 | 79044657 | 79043755 | ID=Msa1216890-mRNA-1:cds;Parent=Msa1216890-mRNA-1 |
| chr8_1 | CDS | 79045609 | 79045743 | 79045609 | ID=Msa1216890-mRNA-1:cds;Parent=Msa1216890-mRNA-1 |
| chr8_1 | CDS | 79046244 | 79046405 | 79046244 | ID=Msa1216890-mRNA-1:cds;Parent=Msa1216890-mRNA-1 |
| chr8_1 | three_prime_UTR | 79046406 | 79046409 | 79046406 | ID=Msa1216890-mRNA-1:three_prime_utr;Parent=Msa1216890-mRNA-1 |
| chr8_1 | three_prime_UTR | 79046539 | 79046972 | 79046539 | ID=Msa1216890-mRNA-1:three_prime_utr;Parent=Msa1216890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
