Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417870 | A0A1S2YB23 | 82.101 | 257 | 45 | 1 | 1 | 257 | 1 | 256 | 5.61e-137 | 395 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa1417870 | 0.847166 | 1.372916e-59 | -8.615850e-47 |
| Msa0004920 | Msa1417870 | 0.801236 | 9.901337e-49 | -8.615850e-47 |
| Msa0012080 | Msa1417870 | 0.801573 | 8.450020e-49 | -8.615850e-47 |
| Msa0016670 | Msa1417870 | 0.812903 | 3.353973e-51 | -8.615850e-47 |
| Msa0017510 | Msa1417870 | 0.829742 | 4.341466e-55 | -8.615850e-47 |
| Msa0030430 | Msa1417870 | 0.804611 | 1.988250e-49 | -8.615850e-47 |
| Msa0032840 | Msa1417870 | -0.806410 | 8.339734e-50 | -8.615850e-47 |
| Msa0046100 | Msa1417870 | 0.803080 | 4.134009e-49 | -8.615850e-47 |
| Msa0046750 | Msa1417870 | 0.819493 | 1.128166e-52 | -8.615850e-47 |
| Msa0049650 | Msa1417870 | -0.822765 | 1.988668e-53 | -8.615850e-47 |
| Msa0064560 | Msa1417870 | 0.802368 | 5.798558e-49 | -8.615850e-47 |
| Msa0074320 | Msa1417870 | 0.808808 | 2.581192e-50 | -8.615850e-47 |
| Msa0076310 | Msa1417870 | 0.807138 | 5.852410e-50 | -8.615850e-47 |
| Msa0089630 | Msa1417870 | 0.802065 | 6.693727e-49 | -8.615850e-47 |
| Msa0090590 | Msa1417870 | 0.803693 | 3.085813e-49 | -8.615850e-47 |
| Msa0094120 | Msa1417870 | 0.848809 | 4.835766e-60 | -8.615850e-47 |
| Msa0103000 | Msa1417870 | 0.805243 | 1.466595e-49 | -8.615850e-47 |
| Msa0110970 | Msa1417870 | 0.842547 | 2.419037e-58 | -8.615850e-47 |
| Msa1346370 | Msa1417870 | 0.823783 | 1.150028e-53 | -8.615850e-47 |
| Msa1367080 | Msa1417870 | 0.807084 | 6.008832e-50 | -8.615850e-47 |
| Msa1374120 | Msa1417870 | 0.806574 | 7.699502e-50 | -8.615850e-47 |
| Msa1392200 | Msa1417870 | 0.819795 | 9.626530e-53 | -8.615850e-47 |
| Msa1411070 | Msa1417870 | 0.806515 | 7.925625e-50 | -8.615850e-47 |
| Msa1415640 | Msa1417870 | 0.804208 | 2.412184e-49 | -8.615850e-47 |
| Msa1417420 | Msa1417870 | 0.816116 | 6.527065e-52 | -8.615850e-47 |
| Msa1417870 | Msa1427760 | 0.824616 | 7.327326e-54 | -8.615850e-47 |
| Msa1417870 | Msa1429250 | 0.807697 | 4.453868e-50 | -8.615850e-47 |
| Msa1417870 | Msa1446830 | 0.806769 | 7.004881e-50 | -8.615850e-47 |
| Msa1417870 | Msa1457440 | 0.830245 | 3.273675e-55 | -8.615850e-47 |
| Msa1417870 | Msa1461300 | 0.801024 | 1.094431e-48 | -8.615850e-47 |
| Msa0607200 | Msa1417870 | 0.811224 | 7.791445e-51 | -8.615850e-47 |
| Msa0615590 | Msa1417870 | 0.807573 | 4.732099e-50 | -8.615850e-47 |
| Msa0616220 | Msa1417870 | 0.848448 | 6.091602e-60 | -8.615850e-47 |
| Msa0620240 | Msa1417870 | 0.803126 | 4.045109e-49 | -8.615850e-47 |
| Msa0621490 | Msa1417870 | 0.820805 | 5.648594e-53 | -8.615850e-47 |
| Msa0625530 | Msa1417870 | -0.823385 | 1.424956e-53 | -8.615850e-47 |
| Msa0643560 | Msa1417870 | 0.800727 | 1.258170e-48 | -8.615850e-47 |
| Msa0650020 | Msa1417870 | 0.814849 | 1.249645e-51 | -8.615850e-47 |
| Msa0661190 | Msa1417870 | -0.806571 | 7.711298e-50 | -8.615850e-47 |
| Msa0677290 | Msa1417870 | 0.806207 | 9.202450e-50 | -8.615850e-47 |
| Msa0692080 | Msa1417870 | 0.817008 | 4.121084e-52 | -8.615850e-47 |
| Msa0699550 | Msa1417870 | 0.843758 | 1.151019e-58 | -8.615850e-47 |
| Msa0703230 | Msa1417870 | 0.805336 | 1.402054e-49 | -8.615850e-47 |
| Msa0708520 | Msa1417870 | 0.822113 | 2.818140e-53 | -8.615850e-47 |
| Msa0738630 | Msa1417870 | -0.808262 | 3.376446e-50 | -8.615850e-47 |
| Msa0743720 | Msa1417870 | 0.801168 | 1.022462e-48 | -8.615850e-47 |
| Msa0760380 | Msa1417870 | 0.819304 | 1.245883e-52 | -8.615850e-47 |
| Msa0783760 | Msa1417870 | -0.805030 | 1.625250e-49 | -8.615850e-47 |
| Msa0785210 | Msa1417870 | 0.802610 | 5.170921e-49 | -8.615850e-47 |
| Msa0813720 | Msa1417870 | 0.800793 | 1.220001e-48 | -8.615850e-47 |
| Msa0813740 | Msa1417870 | 0.801899 | 7.241508e-49 | -8.615850e-47 |
| Msa0818980 | Msa1417870 | -0.808481 | 3.032698e-50 | -8.615850e-47 |
| Msa0819030 | Msa1417870 | -0.816196 | 6.263785e-52 | -8.615850e-47 |
| Msa0824660 | Msa1417870 | 0.801026 | 1.093429e-48 | -8.615850e-47 |
| Msa0824680 | Msa1417870 | 0.802000 | 6.903267e-49 | -8.615850e-47 |
| Msa0121810 | Msa1417870 | 0.812061 | 5.122711e-51 | -8.615850e-47 |
| Msa0124340 | Msa1417870 | 0.814396 | 1.573982e-51 | -8.615850e-47 |
| Msa0140570 | Msa1417870 | 0.990045 | 8.340810e-181 | -8.615850e-47 |
| Msa0143430 | Msa1417870 | 0.812671 | 3.769486e-51 | -8.615850e-47 |
| Msa0157290 | Msa1417870 | 0.828852 | 7.141121e-55 | -8.615850e-47 |
| Msa0160550 | Msa1417870 | 0.807097 | 5.970044e-50 | -8.615850e-47 |
| Msa0186890 | Msa1417870 | 0.804303 | 2.304775e-49 | -8.615850e-47 |
| Msa0187690 | Msa1417870 | 0.810668 | 1.027886e-50 | -8.615850e-47 |
| Msa0192510 | Msa1417870 | 0.851748 | 7.248661e-61 | -8.615850e-47 |
| Msa0193120 | Msa1417870 | 0.842937 | 1.905323e-58 | -8.615850e-47 |
| Msa0225740 | Msa1417870 | 0.851682 | 7.569563e-61 | -8.615850e-47 |
| Msa0230550 | Msa1417870 | -0.801959 | 7.040061e-49 | -8.615850e-47 |
| Msa0234600 | Msa1417870 | 0.803903 | 2.791997e-49 | -8.615850e-47 |
| Msa1242230 | Msa1417870 | 0.805961 | 1.036422e-49 | -8.615850e-47 |
| Msa1242240 | Msa1417870 | 0.813286 | 2.763542e-51 | -8.615850e-47 |
| Msa1253930 | Msa1417870 | -0.802113 | 6.543972e-49 | -8.615850e-47 |
| Msa1254610 | Msa1417870 | 0.806579 | 7.679623e-50 | -8.615850e-47 |
| Msa1264020 | Msa1417870 | 0.825670 | 4.130966e-54 | -8.615850e-47 |
| Msa1283840 | Msa1417870 | 0.812235 | 4.695971e-51 | -8.615850e-47 |
| Msa1284260 | Msa1417870 | 0.815702 | 8.072964e-52 | -8.615850e-47 |
| Msa1291890 | Msa1417870 | 0.802464 | 5.540683e-49 | -8.615850e-47 |
| Msa1292830 | Msa1417870 | 0.803917 | 2.772675e-49 | -8.615850e-47 |
| Msa1294670 | Msa1417870 | 0.804571 | 2.026185e-49 | -8.615850e-47 |
| Msa1307660 | Msa1417870 | -0.814475 | 1.511609e-51 | -8.615850e-47 |
| Msa1322860 | Msa1417870 | 0.806652 | 7.414657e-50 | -8.615850e-47 |
| Msa1327050 | Msa1417870 | 0.818886 | 1.550844e-52 | -8.615850e-47 |
| Msa1343070 | Msa1417870 | 0.805059 | 1.602933e-49 | -8.615850e-47 |
| Msa0369050 | Msa1417870 | 0.801837 | 7.459083e-49 | -8.615850e-47 |
| Msa0369220 | Msa1417870 | 0.800897 | 1.161659e-48 | -8.615850e-47 |
| Msa0381550 | Msa1417870 | 0.959820 | 7.266276e-118 | -8.615850e-47 |
| Msa0402330 | Msa1417870 | 0.801799 | 7.591336e-49 | -8.615850e-47 |
| Msa0414950 | Msa1417870 | -0.810560 | 1.084792e-50 | -8.615850e-47 |
| Msa0419820 | Msa1417870 | 0.826284 | 2.952586e-54 | -8.615850e-47 |
| Msa0423040 | Msa1417870 | 0.808161 | 3.548746e-50 | -8.615850e-47 |
| Msa0424920 | Msa1417870 | 0.821765 | 3.392077e-53 | -8.615850e-47 |
| Msa0425010 | Msa1417870 | 0.833998 | 3.864594e-56 | -8.615850e-47 |
| Msa0436050 | Msa1417870 | 0.827296 | 1.692403e-54 | -8.615850e-47 |
| Msa0441130 | Msa1417870 | 0.836710 | 7.976791e-57 | -8.615850e-47 |
| Msa0443500 | Msa1417870 | 0.818135 | 2.295093e-52 | -8.615850e-47 |
| Msa0459770 | Msa1417870 | -0.806888 | 6.609687e-50 | -8.615850e-47 |
| Msa0469030 | Msa1417870 | 0.811548 | 6.627079e-51 | -8.615850e-47 |
| Msa0480980 | Msa1417870 | 0.810239 | 1.272200e-50 | -8.615850e-47 |
| Msa0981060 | Msa1417870 | 0.805484 | 1.305256e-49 | -8.615850e-47 |
| Msa0993290 | Msa1417870 | 0.801950 | 7.069240e-49 | -8.615850e-47 |
| Msa0993330 | Msa1417870 | 0.800517 | 1.388898e-48 | -8.615850e-47 |
| Msa0993600 | Msa1417870 | 0.807269 | 5.488058e-50 | -8.615850e-47 |
| Msa1003310 | Msa1417870 | 0.801464 | 8.892904e-49 | -8.615850e-47 |
| Msa1003750 | Msa1417870 | 0.804225 | 2.392718e-49 | -8.615850e-47 |
| Msa1012700 | Msa1417870 | 0.807495 | 4.914632e-50 | -8.615850e-47 |
| Msa1013400 | Msa1417870 | 0.807533 | 4.825064e-50 | -8.615850e-47 |
| Msa1014500 | Msa1417870 | 0.811062 | 8.446697e-51 | -8.615850e-47 |
| Msa1023400 | Msa1417870 | 0.836560 | 8.710043e-57 | -8.615850e-47 |
| Msa1040400 | Msa1417870 | 0.819881 | 9.200978e-53 | -8.615850e-47 |
| Msa1040830 | Msa1417870 | 0.823912 | 1.072736e-53 | -8.615850e-47 |
| Msa1082700 | Msa1417870 | 0.827194 | 1.789789e-54 | -8.615850e-47 |
| Msa1106700 | Msa1417870 | 0.807909 | 4.014094e-50 | -8.615850e-47 |
| Msa0264570 | Msa1417870 | 0.826053 | 3.349883e-54 | -8.615850e-47 |
| Msa0268130 | Msa1417870 | 0.801909 | 7.208639e-49 | -8.615850e-47 |
| Msa0272690 | Msa1417870 | 0.820320 | 7.299733e-53 | -8.615850e-47 |
| Msa0279790 | Msa1417870 | 0.802074 | 6.665564e-49 | -8.615850e-47 |
| Msa0280900 | Msa1417870 | 0.814638 | 1.391443e-51 | -8.615850e-47 |
| Msa0292400 | Msa1417870 | 0.804164 | 2.463013e-49 | -8.615850e-47 |
| Msa0295070 | Msa1417870 | 0.801088 | 1.061978e-48 | -8.615850e-47 |
| Msa0306300 | Msa1417870 | 0.802805 | 4.713564e-49 | -8.615850e-47 |
| Msa0318250 | Msa1417870 | 0.800087 | 1.698701e-48 | -8.615850e-47 |
| Msa0320100 | Msa1417870 | 0.810084 | 1.373984e-50 | -8.615850e-47 |
| Msa0355270 | Msa1417870 | 0.800165 | 1.637970e-48 | -8.615850e-47 |
| Msa1124110 | Msa1417870 | 0.811665 | 6.248181e-51 | -8.615850e-47 |
| Msa1127890 | Msa1417870 | 0.817663 | 2.934488e-52 | -8.615850e-47 |
| Msa1133000 | Msa1417870 | 0.804603 | 1.995807e-49 | -8.615850e-47 |
| Msa1134110 | Msa1417870 | 0.815535 | 8.795713e-52 | -8.615850e-47 |
| Msa1139810 | Msa1417870 | 0.815866 | 7.423814e-52 | -8.615850e-47 |
| Msa1165870 | Msa1417870 | 0.803731 | 3.031351e-49 | -8.615850e-47 |
| Msa1168950 | Msa1417870 | 0.808589 | 2.875614e-50 | -8.615850e-47 |
| Msa1174010 | Msa1417870 | 0.800944 | 1.136460e-48 | -8.615850e-47 |
| Msa1193070 | Msa1417870 | 0.813669 | 2.276787e-51 | -8.615850e-47 |
| Msa1203250 | Msa1417870 | 0.817470 | 3.243584e-52 | -8.615850e-47 |
| Msa1209460 | Msa1417870 | 0.803770 | 2.975318e-49 | -8.615850e-47 |
| Msa1222970 | Msa1417870 | 0.812432 | 4.253288e-51 | -8.615850e-47 |
| Msa0483860 | Msa1417870 | 0.835652 | 1.481314e-56 | -8.615850e-47 |
| Msa0507680 | Msa1417870 | 0.804528 | 2.068561e-49 | -8.615850e-47 |
| Msa0510350 | Msa1417870 | 0.806030 | 1.002698e-49 | -8.615850e-47 |
| Msa0516320 | Msa1417870 | 0.837425 | 5.238703e-57 | -8.615850e-47 |
| Msa0520070 | Msa1417870 | 0.965211 | 2.599922e-124 | -8.615850e-47 |
| Msa0541860 | Msa1417870 | 0.801720 | 7.883045e-49 | -8.615850e-47 |
| Msa0577940 | Msa1417870 | -0.810712 | 1.005512e-50 | -8.615850e-47 |
| Msa0581760 | Msa1417870 | 0.805523 | 1.280935e-49 | -8.615850e-47 |
| Msa0850960 | Msa1417870 | 0.804992 | 1.655074e-49 | -8.615850e-47 |
| Msa0871270 | Msa1417870 | 0.826588 | 2.498272e-54 | -8.615850e-47 |
| Msa0876200 | Msa1417870 | 0.814366 | 1.598396e-51 | -8.615850e-47 |
| Msa0878500 | Msa1417870 | 0.832007 | 1.208651e-55 | -8.615850e-47 |
| Msa0880140 | Msa1417870 | 0.826587 | 2.499844e-54 | -8.615850e-47 |
| Msa0880440 | Msa1417870 | 0.805151 | 1.533379e-49 | -8.615850e-47 |
| Msa0888580 | Msa1417870 | 0.801270 | 9.745688e-49 | -8.615850e-47 |
| Msa0938220 | Msa1417870 | 0.819092 | 1.392683e-52 | -8.615850e-47 |
| Msa0944190 | Msa1417870 | 0.853037 | 3.112708e-61 | -8.615850e-47 |
| Msa0968590 | Msa1417870 | 0.803370 | 3.600636e-49 | -8.615850e-47 |
| Msa0979010 | Msa1417870 | 0.800935 | 1.141185e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417870 | MtrunA17_Chr1g0151791 | 54.231 | 260 | 116 | 2 | 1 | 257 | 1 | 260 | 3.86e-85 | 254 |
| Msa1417870 | MtrunA17_Chr3g0135551 | 93.023 | 86 | 4 | 1 | 1 | 86 | 1 | 84 | 1.83e-32 | 114 |
| Msa1417870 | MtrunA17_Chr3g0135531 | 91.860 | 86 | 5 | 1 | 1 | 86 | 1 | 84 | 2.24e-32 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417870 | AT3G20430.1 | 47.348 | 264 | 125 | 7 | 1 | 256 | 1 | 258 | 2.93e-68 | 212 |
Find 78 sgRNAs with CRISPR-Local
Find 423 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGCAAGAATTCGAATTAT+TGG | 0.185828 | tig0024530:-53125 | None:intergenic |
| TTCTTTCATGTGTTCCTATT+TGG | 0.197768 | tig0024530:-47713 | Msa1417870:three_prime_UTR |
| TGAAACACTCGTGGCAATTT+TGG | 0.217790 | tig0024530:+47556 | None:intergenic |
| GCCCAATTTGCAAAATGTTT+TGG | 0.258923 | tig0024530:-52600 | Msa1417870:CDS |
| TGAGAAGAATCATCTTTCTT+TGG | 0.263292 | tig0024530:+48039 | None:intergenic |
| CTTTATGATTATATAGGATT+AGG | 0.263431 | tig0024530:-47641 | Msa1417870:three_prime_UTR |
| CTGTCTATATTTGTGACTTT+AGG | 0.289769 | tig0024530:+52455 | None:intergenic |
| TGTTGAAGAAGGAGAGTTAG+TGG | 0.307280 | tig0024530:-52624 | Msa1417870:CDS |
| ATTATCTCTTTGTAGGCCTT+TGG | 0.314430 | tig0024530:+48463 | None:intergenic |
| ATGCAAGAATTCGAATTATT+GGG | 0.316904 | tig0024530:-53124 | None:intergenic |
| TATTAATGCAGAAGCAATTC+AGG | 0.317250 | tig0024530:-48089 | Msa1417870:intron |
| AGATGGCTTTATGATTATAT+AGG | 0.318884 | tig0024530:-47647 | Msa1417870:three_prime_UTR |
| GTCTACCATCAGCAGTCTTT+TGG | 0.323934 | tig0024530:+48536 | None:intergenic |
| ATATTTAGTTGTTTAACATT+TGG | 0.343026 | tig0024530:+48063 | None:intergenic |
| TTTATGATTATATAGGATTA+GGG | 0.351487 | tig0024530:-47640 | Msa1417870:three_prime_UTR |
| AGATGATTCTTCTCAAGGTT+TGG | 0.368080 | tig0024530:-48031 | Msa1417870:CDS |
| TATCTGTTCATGACAGGTTA+AGG | 0.381152 | tig0024530:-47903 | Msa1417870:CDS |
| CTGCTGATGGTAGACGATTT+CGG | 0.382090 | tig0024530:-48528 | Msa1417870:CDS |
| GGTTTGGCCTTATCATTTGC+TGG | 0.387229 | tig0024530:-48015 | Msa1417870:CDS |
| GAAGAACAAGAGAAAGAGAA+AGG | 0.401070 | tig0024530:-52486 | Msa1417870:CDS |
| GAAAAGAGCAAAAGAGTTTG+AGG | 0.403168 | tig0024530:-48440 | Msa1417870:intron |
| GTGGAACATCATAAAGGTTC+AGG | 0.418166 | tig0024530:-48488 | Msa1417870:CDS |
| TACACTGCTGCGGGTTGTCT+TGG | 0.419749 | tig0024530:-50583 | Msa1417870:CDS |
| AGTGCTGAACTTGTCTCAAA+TGG | 0.426040 | tig0024530:-47506 | Msa1417870:three_prime_UTR |
| AAAGGGTGGAGAGACCAAAT+AGG | 0.432254 | tig0024530:+47699 | None:intergenic |
| AATTCGAATTATTGGGAGAC+AGG | 0.433198 | tig0024530:-53117 | Msa1417870:five_prime_UTR |
| TCATTTGCTGGCAGTGATCA+AGG | 0.433421 | tig0024530:-48003 | Msa1417870:CDS |
| ATGGAAGAAGTGGGGTATAG+TGG | 0.440867 | tig0024530:-47603 | Msa1417870:three_prime_UTR |
| ATGGTAGACGATTTCGGAGT+GGG | 0.444653 | tig0024530:-48522 | Msa1417870:CDS |
| ATGCTGATTCAGTGTTTGTA+AGG | 0.449143 | tig0024530:+53059 | None:intergenic |
| AGATCATCATCATAGGAAAC+AGG | 0.457123 | tig0024530:+47877 | None:intergenic |
| AAGAAAGATGATTCTTCTCA+AGG | 0.457634 | tig0024530:-48036 | Msa1417870:CDS |
| TTGCATTTCTGATGCAAGAA+AGG | 0.457701 | tig0024530:+47963 | None:intergenic |
| TCCTATGATGATGATCTACT+TGG | 0.470099 | tig0024530:-47871 | Msa1417870:CDS |
| TATATAATCATAAAGCCATC+TGG | 0.480299 | tig0024530:+47649 | None:intergenic |
| AAGAGAAAGAGAAAGGGTTC+AGG | 0.486855 | tig0024530:-52479 | Msa1417870:CDS |
| TCCAAGTAGATCATCATCAT+AGG | 0.495710 | tig0024530:+47870 | None:intergenic |
| CATACTGTGGAACATCATAA+AGG | 0.500400 | tig0024530:-48494 | Msa1417870:CDS |
| GACTGTTTGTCATGGAGGAA+GGG | 0.504833 | tig0024530:-52709 | Msa1417870:exon |
| AATGCAAAATCAACACGAAC+CGG | 0.510093 | tig0024530:-47947 | Msa1417870:CDS |
| ATCACTGCCAGCAAATGATA+AGG | 0.511776 | tig0024530:+48008 | None:intergenic |
| ATTCAGTGTTTGTAAGGCGG+TGG | 0.511836 | tig0024530:+53065 | None:intergenic |
| CACTAAACCTCTGTCTAAGA+AGG | 0.512541 | tig0024530:+47775 | None:intergenic |
| AATTATTGGGAGACAGGGAG+AGG | 0.514271 | tig0024530:-53111 | Msa1417870:five_prime_UTR |
| GAATGTATCGTTGTTATAGT+TGG | 0.514326 | tig0024530:-47579 | Msa1417870:three_prime_UTR |
| AGTCATGTTGCATCATTGAC+TGG | 0.517971 | tig0024530:+47841 | None:intergenic |
| ACTGTTTGTCATGGAGGAAG+GGG | 0.519176 | tig0024530:-52708 | Msa1417870:exon |
| AAGAACAAGAGAAAGAGAAA+GGG | 0.523902 | tig0024530:-52485 | Msa1417870:CDS |
| AGGATGTAGTCTTCGCTTGA+GGG | 0.524918 | tig0024530:+47735 | None:intergenic |
| TAAAGAAACGAGGAAATGAA+AGG | 0.525448 | tig0024530:+47681 | None:intergenic |
| TTTCTCTTTCAGATGACGAC+AGG | 0.526223 | tig0024530:+50621 | None:intergenic |
| AGGTGTTTGACTGTTTGTCA+TGG | 0.535671 | tig0024530:-52717 | Msa1417870:exon |
| TGACTGTTTGTCATGGAGGA+AGG | 0.536588 | tig0024530:-52710 | Msa1417870:exon |
| GAACTTGTCTCAAATGGATA+CGG | 0.539039 | tig0024530:-47500 | Msa1417870:three_prime_UTR |
| GACATGATTGATGTTGAAGA+AGG | 0.542173 | tig0024530:-52635 | Msa1417870:CDS |
| AAGGATGTAGTCTTCGCTTG+AGG | 0.544346 | tig0024530:+47734 | None:intergenic |
| TCTTTATTTACCTTGCCAGA+TGG | 0.557795 | tig0024530:-47664 | Msa1417870:three_prime_UTR |
| CTAAAGTCACAAATATAGAC+AGG | 0.559077 | tig0024530:-52454 | Msa1417870:intron |
| AAAGAAACGAGGAAATGAAA+GGG | 0.559782 | tig0024530:+47682 | None:intergenic |
| AAATAGGAACACATGAAAGA+AGG | 0.572537 | tig0024530:+47715 | None:intergenic |
| AATCATAAAGCCATCTGGCA+AGG | 0.592575 | tig0024530:+47654 | None:intergenic |
| GTTGATGCAATACAGGCTTG+TGG | 0.597539 | tig0024530:-48562 | Msa1417870:CDS |
| ATTCGAATTATTGGGAGACA+GGG | 0.606740 | tig0024530:-53116 | Msa1417870:five_prime_UTR |
| ATTAAGTGATATCATCAAAG+AGG | 0.607067 | tig0024530:-50551 | Msa1417870:intron |
| TGGTAGACGATTTCGGAGTG+GGG | 0.613310 | tig0024530:-48521 | Msa1417870:CDS |
| CATAAAGGTTCAGGAACCAA+AGG | 0.616588 | tig0024530:-48479 | Msa1417870:CDS |
| GGTAGACGATTTCGGAGTGG+GGG | 0.617630 | tig0024530:-48520 | Msa1417870:CDS |
| TATATGGTATACACTGCTGC+GGG | 0.621075 | tig0024530:-50592 | Msa1417870:CDS |
| GAAACGAGGAAATGAAAGGG+TGG | 0.627679 | tig0024530:+47685 | None:intergenic |
| CTGATTCAGTGTTTGTAAGG+CGG | 0.628840 | tig0024530:+53062 | None:intergenic |
| ATATATGGTATACACTGCTG+CGG | 0.631527 | tig0024530:-50593 | Msa1417870:CDS |
| AAAATCTAATGAAACACTCG+TGG | 0.643803 | tig0024530:+47547 | None:intergenic |
| GGAGGCCAAAAGACTGCTGA+TGG | 0.663490 | tig0024530:-48541 | Msa1417870:CDS |
| GATGGTAGACGATTTCGGAG+TGG | 0.663553 | tig0024530:-48523 | Msa1417870:CDS |
| GATGCAATACAGGCTTGTGG+AGG | 0.676395 | tig0024530:-48559 | Msa1417870:CDS |
| TGTTTGACTGTTTGTCATGG+AGG | 0.687318 | tig0024530:-52714 | Msa1417870:exon |
| TATAGTGAGAATTCAAAGTG+CGG | 0.703531 | tig0024530:-52533 | Msa1417870:CDS |
| GCAAGGTAAATAAAGAAACG+AGG | 0.739293 | tig0024530:+47671 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAACAAAAAAATGTAAA+TGG | + | tig0024530:47739-47758 | None:intergenic | 10.0% |
| !!! | AATTTTTGTAAAAAAATGTT+TGG | - | tig0024530:49122-49141 | Msa1417870:intron | 10.0% |
| !! | ATGAAAATAAAAATAAAAAC+AGG | + | tig0024530:51941-51960 | None:intergenic | 10.0% |
| !!! | TGAATAATCTTTATATTTTT+GGG | - | tig0024530:52175-52194 | Msa1417870:intron | 10.0% |
| !!! | TTATCGGAATATTTTATTTT+AGG | - | tig0024530:48186-48205 | Msa1417870:intron | 15.0% |
| !!! | TAAACTAAAAATGACATTTT+TGG | - | tig0024530:48346-48365 | Msa1417870:intron | 15.0% |
| !! | AAATCCATAATAAACATTAT+GGG | - | tig0024530:48401-48420 | Msa1417870:intron | 15.0% |
| !! | AGTCTAATATTAAGTATTTA+AGG | - | tig0024530:48786-48805 | Msa1417870:intron | 15.0% |
| !! | GTCTAATATTAAGTATTTAA+GGG | - | tig0024530:48787-48806 | Msa1417870:intron | 15.0% |
| !!! | TAAAAAACATTTTATAGTGT+CGG | - | tig0024530:48952-48971 | Msa1417870:intron | 15.0% |
| !!! | ATTTTTTTACAAAAATTCCT+AGG | + | tig0024530:49119-49138 | None:intergenic | 15.0% |
| !!! | ATAATTTTGACATTTATTTC+CGG | + | tig0024530:49228-49247 | None:intergenic | 15.0% |
| !!! | TATGAAATATATATGGTTTT+TGG | + | tig0024530:49278-49297 | None:intergenic | 15.0% |
| !! | CAGAAAATATGAAATATATA+TGG | + | tig0024530:49285-49304 | None:intergenic | 15.0% |
| !! | TCAAATGACTTAAATAATAT+TGG | - | tig0024530:50202-50221 | Msa1417870:intron | 15.0% |
| !! | GATTAAATTAAGTAAAACAA+AGG | + | tig0024530:50636-50655 | None:intergenic | 15.0% |
| !! | TTTCTGAATATTTCTTAATT+TGG | - | tig0024530:50695-50714 | Msa1417870:intron | 15.0% |
| !!! | GTGAATAATCTTTATATTTT+TGG | - | tig0024530:52174-52193 | Msa1417870:intron | 15.0% |
| !! | ATATTTAGTTGTTTAACATT+TGG | + | tig0024530:52528-52547 | None:intergenic | 15.0% |
| !! | TTTATGATTATATAGGATTA+GGG | - | tig0024530:52948-52967 | Msa1417870:intron | 15.0% |
| !! | AAACAATACGCAATAAATAA+AGG | + | tig0024530:47628-47647 | None:intergenic | 20.0% |
| !!! | TAAAAATGACATTTTTGGAT+TGG | - | tig0024530:48351-48370 | Msa1417870:intron | 20.0% |
| !! | GAAATCCATAATAAACATTA+TGG | - | tig0024530:48400-48419 | Msa1417870:intron | 20.0% |
| !! | AATCCATAATAAACATTATG+GGG | - | tig0024530:48402-48421 | Msa1417870:intron | 20.0% |
| !!! | ATTTTAGCCTTTTTTATGTT+TGG | - | tig0024530:48481-48500 | Msa1417870:CDS | 20.0% |
| !! | AAACAAACCAAACATAAAAA+AGG | + | tig0024530:48491-48510 | None:intergenic | 20.0% |
| !!! | CTTAGATTTTTTTTATTGTG+CGG | - | tig0024530:48525-48544 | Msa1417870:CDS | 20.0% |
| !!! | TTAGATTTTTTTTATTGTGC+GGG | - | tig0024530:48526-48545 | Msa1417870:CDS | 20.0% |
| !!! | TTAGTCTTATGCTTTTTTAT+TGG | - | tig0024530:48691-48710 | Msa1417870:intron | 20.0% |
| !!! | TAATTTTGACATTTATTTCC+GGG | + | tig0024530:49227-49246 | None:intergenic | 20.0% |
| !!! | CTATGCATTGTTTTTTTTTT+TGG | - | tig0024530:49406-49425 | Msa1417870:intron | 20.0% |
| !!! | TCTACTTAAAGATGTTATTT+CGG | - | tig0024530:50251-50270 | Msa1417870:intron | 20.0% |
| !! | ATGATTTGAACAAATGTATA+TGG | + | tig0024530:50551-50570 | None:intergenic | 20.0% |
| !!! | TCTTTTATGTAAAGCAAATA+TGG | - | tig0024530:51293-51312 | Msa1417870:intron | 20.0% |
| !! | GCAAATAAATAAAGAAACTT+TGG | - | tig0024530:51441-51460 | Msa1417870:intron | 20.0% |
| !!! | TTTGCATATAGTGTTTATTT+TGG | - | tig0024530:51581-51600 | Msa1417870:intron | 20.0% |
| !!! | ATATAGTGTTTATTTTGGTT+GGG | - | tig0024530:51586-51605 | Msa1417870:intron | 20.0% |
| !! | AAAAATAAGTAAAGTCACTA+CGG | + | tig0024530:51730-51749 | None:intergenic | 20.0% |
| !! | AATTTACAATGTATCAACTT+AGG | + | tig0024530:51988-52007 | None:intergenic | 20.0% |
| !!! | ATAATCTTTATATTTTTGGG+TGG | - | tig0024530:52178-52197 | Msa1417870:intron | 20.0% |
| !!! | TAATCTTTATATTTTTGGGT+GGG | - | tig0024530:52179-52198 | Msa1417870:intron | 20.0% |
| !! | TTTGTAGTAACTATTAAGTA+GGG | - | tig0024530:52305-52324 | Msa1417870:intron | 20.0% |
| !! | TATCCAAATAAATCAAGTAA+AGG | - | tig0024530:52345-52364 | Msa1417870:intron | 20.0% |
| !!! | AAATTTTCTTTAGAAGTAAC+CGG | + | tig0024530:52663-52682 | None:intergenic | 20.0% |
| !! | CTTTATGATTATATAGGATT+AGG | - | tig0024530:52947-52966 | Msa1417870:intron | 20.0% |
| ! | TTCAAATTGCACTTACAATT+AGG | - | tig0024530:47666-47685 | Msa1417870:three_prime_UTR | 25.0% |
| ! | TCAAATTGCACTTACAATTA+GGG | - | tig0024530:47667-47686 | Msa1417870:three_prime_UTR | 25.0% |
| !! | TCCAAAACATTTTGCAAATT+GGG | + | tig0024530:47992-48011 | None:intergenic | 25.0% |
| !! | TTCCAAAACATTTTGCAAAT+TGG | + | tig0024530:47993-48012 | None:intergenic | 25.0% |
| !!! | ATTCATTGAGTTTTGGTTAT+CGG | - | tig0024530:48170-48189 | Msa1417870:intron | 25.0% |
| !! | CAACTTAAGTTTCCAAATTT+TGG | + | tig0024530:48291-48310 | None:intergenic | 25.0% |
| ! | ATCCATAATAAACATTATGG+GGG | - | tig0024530:48403-48422 | Msa1417870:intron | 25.0% |
| ! | AGTTTATTAAGCCATCAATA+AGG | + | tig0024530:48731-48750 | None:intergenic | 25.0% |
| ! | AGGATACAAAAATAATTCCT+TGG | - | tig0024530:49056-49075 | Msa1417870:intron | 25.0% |
| ! | TGGTTTAAAAAGTAAAATCC+CGG | - | tig0024530:49206-49225 | Msa1417870:intron | 25.0% |
| ! | TGGTCTCTTGAATTTAAAAA+GGG | + | tig0024530:49258-49277 | None:intergenic | 25.0% |
| ! | TTGGTCTCTTGAATTTAAAA+AGG | + | tig0024530:49259-49278 | None:intergenic | 25.0% |
| !! | TATTTTCTGCTAATAAAGCA+AGG | - | tig0024530:49296-49315 | Msa1417870:intron | 25.0% |
| ! | AATACTCATGTCAAACTTAA+TGG | + | tig0024530:49344-49363 | None:intergenic | 25.0% |
| !!! | TCCATTTTTTTATAGAAGGA+AGG | - | tig0024530:49475-49494 | Msa1417870:intron | 25.0% |
| ! | TCCTTCCTTCTATAAAAAAA+TGG | + | tig0024530:49479-49498 | None:intergenic | 25.0% |
| ! | TAGAAGGAAGGAAAAAAAAT+TGG | - | tig0024530:49487-49506 | Msa1417870:intron | 25.0% |
| ! | GAAAGAGAAAAAGTCATATA+TGG | - | tig0024530:49980-49999 | Msa1417870:intron | 25.0% |
| ! | ATTAAGTGATATCATCAAAG+AGG | - | tig0024530:50037-50056 | Msa1417870:intron | 25.0% |
| !! | ATAATATTGGTGATACTGTT+TGG | - | tig0024530:50215-50234 | Msa1417870:intron | 25.0% |
| ! | ATGTAAGAAACAGAGAAAAT+GGG | + | tig0024530:50415-50434 | None:intergenic | 25.0% |
| ! | AATGTAAGAAACAGAGAAAA+TGG | + | tig0024530:50416-50435 | None:intergenic | 25.0% |
| ! | AAGTTTCCATGTATTTAGAA+GGG | + | tig0024530:50461-50480 | None:intergenic | 25.0% |
| ! | AAAGTTTCCATGTATTTAGA+AGG | + | tig0024530:50462-50481 | None:intergenic | 25.0% |
| ! | ATTAAGTAAAACAAAGGTTG+TGG | + | tig0024530:50630-50649 | None:intergenic | 25.0% |
| ! | TTATTTCCCATCTCTTTAAT+AGG | - | tig0024530:50806-50825 | Msa1417870:intron | 25.0% |
| ! | AGTTGAGGTTATATACTATT+TGG | - | tig0024530:50874-50893 | Msa1417870:intron | 25.0% |
| ! | AATTAAAATCTGCAAGGTTA+GGG | + | tig0024530:50982-51001 | None:intergenic | 25.0% |
| ! | TCATTATTTACAAACTGTGA+AGG | - | tig0024530:51065-51084 | Msa1417870:intron | 25.0% |
| !! | GATTTTCCTTTAAATATGCT+AGG | - | tig0024530:51473-51492 | Msa1417870:intron | 25.0% |
| ! | AAAATGCCTAGCATATTTAA+AGG | + | tig0024530:51482-51501 | None:intergenic | 25.0% |
| !! | ATATGCTAGGCATTTTTAAA+AGG | - | tig0024530:51486-51505 | Msa1417870:intron | 25.0% |
| ! | AACCCAATTAAACTAAATAC+TGG | + | tig0024530:51512-51531 | None:intergenic | 25.0% |
| !!! | CATATAGTGTTTATTTTGGT+TGG | - | tig0024530:51585-51604 | Msa1417870:intron | 25.0% |
| ! | TAGTTTAGATTCAGAAATCT+TGG | + | tig0024530:51666-51685 | None:intergenic | 25.0% |
| !!! | GTAGTGACTTTACTTATTTT+TGG | - | tig0024530:51729-51748 | Msa1417870:intron | 25.0% |
| !!! | AGTAGAGCTCATATTTTTAT+TGG | + | tig0024530:51764-51783 | None:intergenic | 25.0% |
| ! | TGTACATAAAATATAGATGG+TGG | + | tig0024530:51881-51900 | None:intergenic | 25.0% |
| ! | ACGTGTACATAAAATATAGA+TGG | + | tig0024530:51884-51903 | None:intergenic | 25.0% |
| !! | TCTTTTCATTATCTCTTTGT+AGG | + | tig0024530:52135-52154 | None:intergenic | 25.0% |
| !!! | AATCTTTATATTTTTGGGTG+GGG | - | tig0024530:52180-52199 | Msa1417870:intron | 25.0% |
| ! | ATAGTTACTACAAACATACA+TGG | + | tig0024530:52299-52318 | None:intergenic | 25.0% |
| ! | GTTTGTAGTAACTATTAAGT+AGG | - | tig0024530:52304-52323 | Msa1417870:intron | 25.0% |
| ! | TTGTAGTAACTATTAAGTAG+GGG | - | tig0024530:52306-52325 | Msa1417870:intron | 25.0% |
| ! | AAGCCTTTACTTGATTTATT+TGG | + | tig0024530:52351-52370 | None:intergenic | 25.0% |
| !! | ATTTTATATCTGTTCATGAC+AGG | - | tig0024530:52679-52698 | Msa1417870:CDS | 25.0% |
| ! | TATATAATCATAAAGCCATC+TGG | + | tig0024530:52942-52961 | None:intergenic | 25.0% |
| !!! | AGATGGCTTTATGATTATAT+AGG | - | tig0024530:52941-52960 | Msa1417870:intron | 25.0% |
| ! | ATGAAAAAAATGGAAGAAGT+GGG | - | tig0024530:52976-52995 | Msa1417870:intron | 25.0% |
| !! | TTAGATTTTGCTTCAAATGA+TGG | - | tig0024530:53055-53074 | Msa1417870:five_prime_UTR | 25.0% |
| ! | GAAAATACAGTGATAGTGAT+AGG | + | tig0024530:47606-47625 | None:intergenic | 30.0% |
| ACTGTCAATGAATACCAATT+TGG | - | tig0024530:47829-47848 | Msa1417870:exon | 30.0% | |
| TATAGTGAGAATTCAAAGTG+CGG | - | tig0024530:48055-48074 | Msa1417870:CDS | 30.0% | |
| AAGAACAAGAGAAAGAGAAA+GGG | - | tig0024530:48103-48122 | Msa1417870:intron | 30.0% | |
| CTGTCTATATTTGTGACTTT+AGG | + | tig0024530:48136-48155 | None:intergenic | 30.0% | |
| CTAAAGTCACAAATATAGAC+AGG | - | tig0024530:48134-48153 | Msa1417870:intron | 30.0% | |
| ! | ATCCTACATTCATTGAGTTT+TGG | - | tig0024530:48163-48182 | Msa1417870:intron | 30.0% |
| AACCAAAACTCAATGAATGT+AGG | + | tig0024530:48168-48187 | None:intergenic | 30.0% | |
| !!! | TTTTAGGATGAACTATGCTT+TGG | - | tig0024530:48202-48221 | Msa1417870:intron | 30.0% |
| ! | TTTTACCCATCTCCAAAATT+TGG | - | tig0024530:48276-48295 | Msa1417870:intron | 30.0% |
| !! | AGTTTCCAAATTTTGGAGAT+GGG | + | tig0024530:48284-48303 | None:intergenic | 30.0% |
| !! | AAGTTTCCAAATTTTGGAGA+TGG | + | tig0024530:48285-48304 | None:intergenic | 30.0% |
| CTAGAGTATAGTAATTTAGC+TGG | - | tig0024530:48319-48338 | Msa1417870:intron | 30.0% | |
| !! | ATTTTTGGATTGGATGATGA+TGG | - | tig0024530:48361-48380 | Msa1417870:intron | 30.0% |
| !!! | ATTTTTTTTATTGTGCGGGA+TGG | - | tig0024530:48530-48549 | Msa1417870:CDS | 30.0% |
| ! | AAAAAGCATAAGACTAAGCT+TGG | + | tig0024530:48688-48707 | None:intergenic | 30.0% |
| !!! | TCAATAAGGTTTTTAAGGCT+AGG | + | tig0024530:48717-48736 | None:intergenic | 30.0% |
| AGCCTTAAAAACCTTATTGA+TGG | - | tig0024530:48717-48736 | Msa1417870:intron | 30.0% | |
| ! | AGCCATCAATAAGGTTTTTA+AGG | + | tig0024530:48722-48741 | None:intergenic | 30.0% |
| TAAGTATTTAAGGGTCTGTT+TGG | - | tig0024530:48796-48815 | Msa1417870:intron | 30.0% | |
| AAGTATTTAAGGGTCTGTTT+GGG | - | tig0024530:48797-48816 | Msa1417870:intron | 30.0% | |
| TAATTCCCATCATATATTCC+CGG | + | tig0024530:49092-49111 | None:intergenic | 30.0% | |
| ! | ATGATGGGAATTATATTCCT+AGG | - | tig0024530:49099-49118 | Msa1417870:intron | 30.0% |
| TGGTTAACAATTTGAATTCC+TGG | - | tig0024530:49142-49161 | Msa1417870:intron | 30.0% | |
| GGTTAACAATTTGAATTCCT+GGG | - | tig0024530:49143-49162 | Msa1417870:intron | 30.0% | |
| AATTTACAAAAGAAGTTCCC+AGG | + | tig0024530:49163-49182 | None:intergenic | 30.0% | |
| TCTTGAGAATGCTAAAAACA+TGG | - | tig0024530:49182-49201 | Msa1417870:intron | 30.0% | |
| !!! | CGGTTCCATTTTTTTATAGA+AGG | - | tig0024530:49471-49490 | Msa1417870:intron | 30.0% |
| AAGGAAGGAAAAAAAATTGG+AGG | - | tig0024530:49490-49509 | Msa1417870:intron | 30.0% | |
| AGGAAGGAAAAAAAATTGGA+GGG | - | tig0024530:49491-49510 | Msa1417870:intron | 30.0% | |
| !!! | TTTTTTATTCCAGTGAGAGA+GGG | + | tig0024530:49601-49620 | None:intergenic | 30.0% |
| !!! | ATTTTTTATTCCAGTGAGAG+AGG | + | tig0024530:49602-49621 | None:intergenic | 30.0% |
| TCTCTCACTGGAATAAAAAA+TGG | - | tig0024530:49601-49620 | Msa1417870:intron | 30.0% | |
| AATAAAAAATGGCAGATCGT+GGG | - | tig0024530:49612-49631 | Msa1417870:intron | 30.0% | |
| AGGAAACTTAAAATTTGCCT+GGG | + | tig0024530:49666-49685 | None:intergenic | 30.0% | |
| AAGGAAACTTAAAATTTGCC+TGG | + | tig0024530:49667-49686 | None:intergenic | 30.0% | |
| GAAAAACATATTCCAGTGTT+TGG | + | tig0024530:49694-49713 | None:intergenic | 30.0% | |
| ! | AACACTGGAATATGTTTTTC+CGG | - | tig0024530:49694-49713 | Msa1417870:intron | 30.0% |
| AAGAATGCAAAACTCTTATG+GGG | + | tig0024530:49763-49782 | None:intergenic | 30.0% | |
| GAAGAATGCAAAACTCTTAT+GGG | + | tig0024530:49764-49783 | None:intergenic | 30.0% | |
| AGAAGAATGCAAAACTCTTA+TGG | + | tig0024530:49765-49784 | None:intergenic | 30.0% | |
| CTAAATTTGAGTGCATCATA+GGG | + | tig0024530:50071-50090 | None:intergenic | 30.0% | |
| ACTAAATTTGAGTGCATCAT+AGG | + | tig0024530:50072-50091 | None:intergenic | 30.0% | |
| TCTTTAAGTAGACAGATACT+GGG | + | tig0024530:50243-50262 | None:intergenic | 30.0% | |
| ATCTTTAAGTAGACAGATAC+TGG | + | tig0024530:50244-50263 | None:intergenic | 30.0% | |
| TGGATGAAAGAAAAACAAGA+CGG | + | tig0024530:50297-50316 | None:intergenic | 30.0% | |
| GTAAGAAATTAAGTGATGAG+AGG | + | tig0024530:50369-50388 | None:intergenic | 30.0% | |
| ! | TTCAAATCATCTTCGTTTTC+TGG | - | tig0024530:50561-50580 | Msa1417870:CDS | 30.0% |
| GAGGTTATATACTATTTGGA+CGG | - | tig0024530:50878-50897 | Msa1417870:intron | 30.0% | |
| AGAAATTAAAAATGGCTGCA+TGG | + | tig0024530:50942-50961 | None:intergenic | 30.0% | |
| GAATTAAAATCTGCAAGGTT+AGG | + | tig0024530:50983-51002 | None:intergenic | 30.0% | |
| AGGCTTAGAAAATCGATTAT+GGG | + | tig0024530:51164-51183 | None:intergenic | 30.0% | |
| ! | AGGCCAGTATTTAGTTTAAT+TGG | - | tig0024530:51506-51525 | Msa1417870:intron | 30.0% |
| ! | GGCCAGTATTTAGTTTAATT+GGG | - | tig0024530:51507-51526 | Msa1417870:intron | 30.0% |
| AAAGGAAAATGGAAGATTCT+AGG | + | tig0024530:51640-51659 | None:intergenic | 30.0% | |
| !! | AATTGAGGGTATCATATCAT+TGG | - | tig0024530:51702-51721 | Msa1417870:intron | 30.0% |
| ATACATTGTAAATTTGCACG+CGG | - | tig0024530:51994-52013 | Msa1417870:intron | 30.0% | |
| TATTAATGCAGAAGCAATTC+AGG | - | tig0024530:52499-52518 | Msa1417870:CDS | 30.0% | |
| TGAGAAGAATCATCTTTCTT+TGG | + | tig0024530:52552-52571 | None:intergenic | 30.0% | |
| AAGAAAGATGATTCTTCTCA+AGG | - | tig0024530:52552-52571 | Msa1417870:CDS | 30.0% | |
| AAATAGGAACACATGAAAGA+AGG | + | tig0024530:52876-52895 | None:intergenic | 30.0% | |
| TTCTTTCATGTGTTCCTATT+TGG | - | tig0024530:52875-52894 | Msa1417870:intron | 30.0% | |
| AAAGAAACGAGGAAATGAAA+GGG | + | tig0024530:52909-52928 | None:intergenic | 30.0% | |
| TAAAGAAACGAGGAAATGAA+AGG | + | tig0024530:52910-52929 | None:intergenic | 30.0% | |
| TAGGGCAAACATGAAAAAAA+TGG | - | tig0024530:52966-52985 | Msa1417870:intron | 30.0% | |
| CATGAAAAAAATGGAAGAAG+TGG | - | tig0024530:52975-52994 | Msa1417870:intron | 30.0% | |
| TGAAAAAAATGGAAGAAGTG+GGG | - | tig0024530:52977-52996 | Msa1417870:intron | 30.0% | |
| GAATGTATCGTTGTTATAGT+TGG | - | tig0024530:53009-53028 | Msa1417870:intron | 30.0% | |
| AAAATCTAATGAAACACTCG+TGG | + | tig0024530:53044-53063 | None:intergenic | 30.0% | |
| AATTCGAATTATTGGGAGAC+AGG | - | tig0024530:47471-47490 | Msa1417870:three_prime_UTR | 35.0% | |
| ATTCGAATTATTGGGAGACA+GGG | - | tig0024530:47472-47491 | Msa1417870:three_prime_UTR | 35.0% | |
| !! | ATGCTGATTCAGTGTTTGTA+AGG | + | tig0024530:47532-47551 | None:intergenic | 35.0% |
| ! | TCTTTTCTCAAGCTCTTCTA+AGG | - | tig0024530:47568-47587 | Msa1417870:three_prime_UTR | 35.0% |
| ! | CAACGTGCATTGATAAAACT+CGG | - | tig0024530:47693-47712 | Msa1417870:three_prime_UTR | 35.0% |
| GACATGATTGATGTTGAAGA+AGG | - | tig0024530:47953-47972 | Msa1417870:CDS | 35.0% | |
| ! | GCCCAATTTGCAAAATGTTT+TGG | - | tig0024530:47988-48007 | Msa1417870:CDS | 35.0% |
| GAAGAACAAGAGAAAGAGAA+AGG | - | tig0024530:48102-48121 | Msa1417870:intron | 35.0% | |
| TCTACAGTACACACCTTAAA+GGG | + | tig0024530:48228-48247 | None:intergenic | 35.0% | |
| ATCTACAGTACACACCTTAA+AGG | + | tig0024530:48229-48248 | None:intergenic | 35.0% | |
| !! | TTGGATGATGATGGAGAATT+TGG | - | tig0024530:48370-48389 | Msa1417870:intron | 35.0% |
| !! | TGGATGATGATGGAGAATTT+GGG | - | tig0024530:48371-48390 | Msa1417870:intron | 35.0% |
| TGCCCCCATAATGTTTATTA+TGG | + | tig0024530:48408-48427 | None:intergenic | 35.0% | |
| ! | GGCATTTGTTTGAAGTTTGA+GGG | - | tig0024530:48424-48443 | Msa1417870:intron | 35.0% |
| !! | GAGAAGTATCTGCTATTCAT+TGG | - | tig0024530:48650-48669 | Msa1417870:intron | 35.0% |
| GACTGAATTCCACATTCTAT+TGG | + | tig0024530:48770-48789 | None:intergenic | 35.0% | |
| TTAAAACAAACACCCCCTTA+GGG | + | tig0024530:49037-49056 | None:intergenic | 35.0% | |
| ATTCCTTGGAATAACTTTCC+CGG | - | tig0024530:49070-49089 | Msa1417870:intron | 35.0% | |
| AATTCCCATCATATATTCCC+GGG | + | tig0024530:49091-49110 | None:intergenic | 35.0% | |
| GAGAATGCTAAAAACATGGT+TGG | - | tig0024530:49186-49205 | Msa1417870:intron | 35.0% | |
| AATCAGCATTCATATGCAAG+CGG | - | tig0024530:49451-49470 | Msa1417870:intron | 35.0% | |
| GGAAGGAAAAAAAATTGGAG+GGG | - | tig0024530:49492-49511 | Msa1417870:intron | 35.0% | |
| ! | TTTTTATTCCAGTGAGAGAG+GGG | + | tig0024530:49600-49619 | None:intergenic | 35.0% |
| GAATAAAAAATGGCAGATCG+TGG | - | tig0024530:49611-49630 | Msa1417870:intron | 35.0% | |
| TATTCCAGTGTTTGGTAAGA+AGG | + | tig0024530:49686-49705 | None:intergenic | 35.0% | |
| TTTGTTTCCGAGACATGAAA+TGG | + | tig0024530:49738-49757 | None:intergenic | 35.0% | |
| TGAATGTGAGCATAAAGTCA+CGG | - | tig0024530:49843-49862 | Msa1417870:intron | 35.0% | |
| ATTTGATACAGGGACAAACA+AGG | + | tig0024530:49869-49888 | None:intergenic | 35.0% | |
| ATATATGGTATACACTGCTG+CGG | - | tig0024530:49995-50014 | Msa1417870:intron | 35.0% | |
| TGTGAAATACCATTGTCACT+TGG | - | tig0024530:50137-50156 | Msa1417870:intron | 35.0% | |
| ! | CATTTGAAGCAGTATTGCTT+AGG | + | tig0024530:50189-50208 | None:intergenic | 35.0% |
| !! | TAAAGATGTTATTTCGGTGC+AGG | - | tig0024530:50257-50276 | Msa1417870:intron | 35.0% |
| TGAAAGAAAAACAAGACGGT+TGG | + | tig0024530:50293-50312 | None:intergenic | 35.0% | |
| TTTCATCCAAAGCTGTTTGA+AGG | - | tig0024530:50308-50327 | Msa1417870:intron | 35.0% | |
| AAGAAACAGAGAAAATGGGT+GGG | + | tig0024530:50411-50430 | None:intergenic | 35.0% | |
| TAAGAAACAGAGAAAATGGG+TGG | + | tig0024530:50412-50431 | None:intergenic | 35.0% | |
| ATCCTTCCCTTCTAAATACA+TGG | - | tig0024530:50452-50471 | Msa1417870:intron | 35.0% | |
| TTCCATGTATTTAGAAGGGA+AGG | + | tig0024530:50457-50476 | None:intergenic | 35.0% | |
| TTGACGGTATAACTGAGATA+TGG | - | tig0024530:50516-50535 | Msa1417870:intron | 35.0% | |
| ! | CAAATTTTGTCCAGTTCCAA+TGG | - | tig0024530:50660-50679 | Msa1417870:intron | 35.0% |
| GAAAGTTGTCATAAGACCAT+TGG | + | tig0024530:50679-50698 | None:intergenic | 35.0% | |
| CACAGTCCTATTAAAGAGAT+GGG | + | tig0024530:50815-50834 | None:intergenic | 35.0% | |
| TCACAGTCCTATTAAAGAGA+TGG | + | tig0024530:50816-50835 | None:intergenic | 35.0% | |
| ATAGGACTGTGACTATGATT+TGG | - | tig0024530:50824-50843 | Msa1417870:intron | 35.0% | |
| ACTCTCACCTTTCCTTTAAA+AGG | + | tig0024530:50857-50876 | None:intergenic | 35.0% | |
| GATAAGCATAACCAGATCAA+AGG | + | tig0024530:50905-50924 | None:intergenic | 35.0% | |
| CACGCGTCAGAAATTAAAAA+TGG | + | tig0024530:50950-50969 | None:intergenic | 35.0% | |
| ! | GTCTGGAATTAAAATCTGCA+AGG | + | tig0024530:50988-51007 | None:intergenic | 35.0% |
| GAAGTCACTATGTATGAACA+TGG | + | tig0024530:51126-51145 | None:intergenic | 35.0% | |
| GCTTAGAAAATCGATTATGG+GGG | + | tig0024530:51162-51181 | None:intergenic | 35.0% | |
| GGCTTAGAAAATCGATTATG+GGG | + | tig0024530:51163-51182 | None:intergenic | 35.0% | |
| CAGGCTTAGAAAATCGATTA+TGG | + | tig0024530:51165-51184 | None:intergenic | 35.0% | |
| ! | AATTTCAGCTCTGACATTGT+TGG | + | tig0024530:51268-51287 | None:intergenic | 35.0% |
| TTTACCGTCAAACCTAAATG+TGG | - | tig0024530:51530-51549 | Msa1417870:intron | 35.0% | |
| TTACCGTCAAACCTAAATGT+GGG | - | tig0024530:51531-51550 | Msa1417870:intron | 35.0% | |
| ! | TATCCCACATTTAGGTTTGA+CGG | + | tig0024530:51537-51556 | None:intergenic | 35.0% |
| AATCTTGGCACAAAGGAAAA+TGG | + | tig0024530:51651-51670 | None:intergenic | 35.0% | |
| ATTCAGAAATCTTGGCACAA+AGG | + | tig0024530:51658-51677 | None:intergenic | 35.0% | |
| !!! | GTTTTAGGTTGATGCAATAC+AGG | - | tig0024530:52019-52038 | Msa1417870:intron | 35.0% |
| CATACTGTGGAACATCATAA+AGG | - | tig0024530:52094-52113 | Msa1417870:intron | 35.0% | |
| ATTATCTCTTTGTAGGCCTT+TGG | + | tig0024530:52128-52147 | None:intergenic | 35.0% | |
| GAAAAGAGCAAAAGAGTTTG+AGG | - | tig0024530:52148-52167 | Msa1417870:intron | 35.0% | |
| !! | TGGTTGGTGACAACTAAATT+CGG | - | tig0024530:52238-52257 | Msa1417870:intron | 35.0% |
| TTACTACAAACATACATGGC+TGG | + | tig0024530:52295-52314 | None:intergenic | 35.0% | |
| AGATGATTCTTCTCAAGGTT+TGG | - | tig0024530:52557-52576 | Msa1417870:CDS | 35.0% | |
| TTGCATTTCTGATGCAAGAA+AGG | + | tig0024530:52628-52647 | None:intergenic | 35.0% | |
| AATGCAAAATCAACACGAAC+CGG | - | tig0024530:52641-52660 | Msa1417870:CDS | 35.0% | |
| TATCTGTTCATGACAGGTTA+AGG | - | tig0024530:52685-52704 | Msa1417870:CDS | 35.0% | |
| AGATCATCATCATAGGAAAC+AGG | + | tig0024530:52714-52733 | None:intergenic | 35.0% | |
| ! | TCCTATGATGATGATCTACT+TGG | - | tig0024530:52717-52736 | Msa1417870:exon | 35.0% |
| TCCAAGTAGATCATCATCAT+AGG | + | tig0024530:52721-52740 | None:intergenic | 35.0% | |
| ! | TTTTTCTCCTTCTTAGACAG+AGG | - | tig0024530:52806-52825 | Msa1417870:intron | 35.0% |
| GCAAGGTAAATAAAGAAACG+AGG | + | tig0024530:52920-52939 | None:intergenic | 35.0% | |
| ! | TCTTTATTTACCTTGCCAGA+TGG | - | tig0024530:52924-52943 | Msa1417870:intron | 35.0% |
| GAACTTGTCTCAAATGGATA+CGG | - | tig0024530:53088-53107 | Msa1417870:five_prime_UTR | 35.0% | |
| CTGATTCAGTGTTTGTAAGG+CGG | + | tig0024530:47529-47548 | None:intergenic | 40.0% | |
| GCATCAAGGGAAATCCAAAT+TGG | + | tig0024530:47846-47865 | None:intergenic | 40.0% | |
| ATTTGGATTTCCCTTGATGC+AGG | - | tig0024530:47846-47865 | Msa1417870:CDS | 40.0% | |
| AAACACCTAACCTGCATCAA+GGG | + | tig0024530:47859-47878 | None:intergenic | 40.0% | |
| AGGTGTTTGACTGTTTGTCA+TGG | - | tig0024530:47871-47890 | Msa1417870:CDS | 40.0% | |
| TGTTTGACTGTTTGTCATGG+AGG | - | tig0024530:47874-47893 | Msa1417870:CDS | 40.0% | |
| TGTTGAAGAAGGAGAGTTAG+TGG | - | tig0024530:47964-47983 | Msa1417870:CDS | 40.0% | |
| !!! | GTTTTGGAACAAAGTAGTGC+TGG | - | tig0024530:48004-48023 | Msa1417870:CDS | 40.0% |
| AAGAGAAAGAGAAAGGGTTC+AGG | - | tig0024530:48109-48128 | Msa1417870:intron | 40.0% | |
| AACTATGCTTTGGCCCTTTA+AGG | - | tig0024530:48212-48231 | Msa1417870:intron | 40.0% | |
| !! | GGATGATGATGGAGAATTTG+GGG | - | tig0024530:48372-48391 | Msa1417870:intron | 40.0% |
| !! | GATGATGATGGAGAATTTGG+GGG | - | tig0024530:48373-48392 | Msa1417870:intron | 40.0% |
| ! | GGGCATTTGTTTGAAGTTTG+AGG | - | tig0024530:48423-48442 | Msa1417870:intron | 40.0% |
| GCAATTTCTGTGTGCAAGTA+TGG | - | tig0024530:48628-48647 | Msa1417870:intron | 40.0% | |
| ATTCTATTGGATCACAGAGG+TGG | + | tig0024530:48757-48776 | None:intergenic | 40.0% | |
| CACATTCTATTGGATCACAG+AGG | + | tig0024530:48760-48779 | None:intergenic | 40.0% | |
| CTCTGTGATCCAATAGAATG+TGG | - | tig0024530:48758-48777 | Msa1417870:intron | 40.0% | |
| TATTTAAGGGTCTGTTTGGG+AGG | - | tig0024530:48800-48819 | Msa1417870:intron | 40.0% | |
| ATTTAAGGGTCTGTTTGGGA+GGG | - | tig0024530:48801-48820 | Msa1417870:intron | 40.0% | |
| CTTAAAACAAACACCCCCTT+AGG | + | tig0024530:49038-49057 | None:intergenic | 40.0% | |
| !!! | CTAAGGGGGTGTTTGTTTTA+AGG | - | tig0024530:49036-49055 | Msa1417870:intron | 40.0% |
| TTCCTTGGAATAACTTTCCC+GGG | - | tig0024530:49071-49090 | Msa1417870:intron | 40.0% | |
| ACTTTCCCGGGAATATATGA+TGG | - | tig0024530:49083-49102 | Msa1417870:intron | 40.0% | |
| CTTTCCCGGGAATATATGAT+GGG | - | tig0024530:49084-49103 | Msa1417870:intron | 40.0% | |
| CACCAGAAACAACATGCTAA+TGG | - | tig0024530:49378-49397 | Msa1417870:intron | 40.0% | |
| !! | TGCCATTAGCATGTTGTTTC+TGG | + | tig0024530:49383-49402 | None:intergenic | 40.0% |
| GTTGGAAAATCTCTATTCCC+AGG | + | tig0024530:49578-49597 | None:intergenic | 40.0% | |
| TCGTGGGTCAAATAAATTCC+TGG | - | tig0024530:49628-49647 | Msa1417870:intron | 40.0% | |
| CGTGGGTCAAATAAATTCCT+GGG | - | tig0024530:49629-49648 | Msa1417870:intron | 40.0% | |
| CCTGGGAATAAAAAATACCC+AGG | + | tig0024530:49649-49668 | None:intergenic | 40.0% | |
| !!! | CCTGGGTATTTTTTATTCCC+AGG | - | tig0024530:49646-49665 | Msa1417870:intron | 40.0% |
| GTTTCCTTCTTACCAAACAC+TGG | - | tig0024530:49679-49698 | Msa1417870:intron | 40.0% | |
| ! | AAATGGATTCCCAGGAATAG+AGG | + | tig0024530:49721-49740 | None:intergenic | 40.0% |
| TGGGAATCCATTTCATGTCT+CGG | - | tig0024530:49728-49747 | Msa1417870:intron | 40.0% | |
| ATTTCACTTCGAGGTAGGTT+GGG | + | tig0024530:49824-49843 | None:intergenic | 40.0% | |
| CATTCATTTCACTTCGAGGT+AGG | + | tig0024530:49829-49848 | None:intergenic | 40.0% | |
| CTCACATTCATTTCACTTCG+AGG | + | tig0024530:49833-49852 | None:intergenic | 40.0% | |
| GCTGCTGTACATTTGATACA+GGG | + | tig0024530:49879-49898 | None:intergenic | 40.0% | |
| AGCTGCTGTACATTTGATAC+AGG | + | tig0024530:49880-49899 | None:intergenic | 40.0% | |
| TTTCTCTTTCAGATGACGAC+AGG | + | tig0024530:49970-49989 | None:intergenic | 40.0% | |
| TATATGGTATACACTGCTGC+GGG | - | tig0024530:49996-50015 | Msa1417870:intron | 40.0% | |
| ! | TACCATTGTCACTTGGAAGT+TGG | - | tig0024530:50144-50163 | Msa1417870:intron | 40.0% |
| TTCCAACTTCCAAGTGACAA+TGG | + | tig0024530:50149-50168 | None:intergenic | 40.0% | |
| TTGAAGCAGTATTGCTTAGG+CGG | + | tig0024530:50186-50205 | None:intergenic | 40.0% | |
| CGAAATCCTTCAAACAGCTT+TGG | + | tig0024530:50317-50336 | None:intergenic | 40.0% | |
| GGGAAACAGACAAAAAGCAA+GGG | + | tig0024530:50391-50410 | None:intergenic | 40.0% | |
| TGGGAAACAGACAAAAAGCA+AGG | + | tig0024530:50392-50411 | None:intergenic | 40.0% | |
| TTGCCAAGATTGATCGTCAA+TGG | - | tig0024530:50483-50502 | Msa1417870:intron | 40.0% | |
| ! | CAATGGTGGTGTTAGTTTGA+CGG | - | tig0024530:50500-50519 | Msa1417870:intron | 40.0% |
| TGTCATAAGACCATTGGAAC+TGG | + | tig0024530:50673-50692 | None:intergenic | 40.0% | |
| !! | TTTGGAGCCATGCCTTTTAA+AGG | - | tig0024530:50842-50861 | Msa1417870:intron | 40.0% |
| !! | AGCCATGCCTTTTAAAGGAA+AGG | - | tig0024530:50847-50866 | Msa1417870:intron | 40.0% |
| ! | CACCTTTCCTTTAAAAGGCA+TGG | + | tig0024530:50852-50871 | None:intergenic | 40.0% |
| TAAAGGAAAGGTGAGAGTTG+AGG | - | tig0024530:50859-50878 | Msa1417870:intron | 40.0% | |
| !! | TGCTTGATCTTTGGTGTTCT+TGG | - | tig0024530:51032-51051 | Msa1417870:intron | 40.0% |
| AGTGAGACTATCCCACATTT+AGG | + | tig0024530:51545-51564 | None:intergenic | 40.0% | |
| ! | TTGGGAAAGCCACTCAATTT+TGG | - | tig0024530:51604-51623 | Msa1417870:intron | 40.0% |
| AGCAGATGACCAAAATTGAG+TGG | + | tig0024530:51616-51635 | None:intergenic | 40.0% | |
| TAAACTAGCATTGTCGCAGT+GGG | - | tig0024530:51679-51698 | Msa1417870:intron | 40.0% | |
| TATGTGCCATATGCTTTGCA+TGG | - | tig0024530:51837-51856 | Msa1417870:intron | 40.0% | |
| GTGGAACATCATAAAGGTTC+AGG | - | tig0024530:52100-52119 | Msa1417870:intron | 40.0% | |
| CATAAAGGTTCAGGAACCAA+AGG | - | tig0024530:52109-52128 | Msa1417870:intron | 40.0% | |
| !!! | CTTTATATTTTTGGGTGGGG+AGG | - | tig0024530:52183-52202 | Msa1417870:intron | 40.0% |
| CATCTTGTCTCGTTGATACT+TGG | - | tig0024530:52218-52237 | Msa1417870:intron | 40.0% | |
| TTGTCTCGTTGATACTTGGT+TGG | - | tig0024530:52222-52241 | Msa1417870:intron | 40.0% | |
| !! | GGTTGGTGACAACTAAATTC+GGG | - | tig0024530:52239-52258 | Msa1417870:intron | 40.0% |
| ATCACTGCCAGCAAATGATA+AGG | + | tig0024530:52583-52602 | None:intergenic | 40.0% | |
| AGTCATGTTGCATCATTGAC+TGG | + | tig0024530:52750-52769 | None:intergenic | 40.0% | |
| CACTAAACCTCTGTCTAAGA+AGG | + | tig0024530:52816-52835 | None:intergenic | 40.0% | |
| AATCATAAAGCCATCTGGCA+AGG | + | tig0024530:52937-52956 | None:intergenic | 40.0% | |
| ! | TGAAACACTCGTGGCAATTT+TGG | + | tig0024530:53035-53054 | None:intergenic | 40.0% |
| ! | AGTGCTGAACTTGTCTCAAA+TGG | - | tig0024530:53082-53101 | Msa1417870:five_prime_UTR | 40.0% |
| AATTATTGGGAGACAGGGAG+AGG | - | tig0024530:47477-47496 | Msa1417870:three_prime_UTR | 45.0% | |
| ATTCAGTGTTTGTAAGGCGG+TGG | + | tig0024530:47526-47545 | None:intergenic | 45.0% | |
| GATTTCCCTTGATGCAGGTT+AGG | - | tig0024530:47851-47870 | Msa1417870:CDS | 45.0% | |
| CAAACACCTAACCTGCATCA+AGG | + | tig0024530:47860-47879 | None:intergenic | 45.0% | |
| TGACTGTTTGTCATGGAGGA+AGG | - | tig0024530:47878-47897 | Msa1417870:CDS | 45.0% | |
| GACTGTTTGTCATGGAGGAA+GGG | - | tig0024530:47879-47898 | Msa1417870:CDS | 45.0% | |
| ACTGTTTGTCATGGAGGAAG+GGG | - | tig0024530:47880-47899 | Msa1417870:CDS | 45.0% | |
| TTTAAGGGTCTGTTTGGGAG+GGG | - | tig0024530:48802-48821 | Msa1417870:intron | 45.0% | |
| !!! | TTGGATGGAGGGTTTTGGAA+GGG | + | tig0024530:49009-49028 | None:intergenic | 45.0% |
| !!! | TTTGGATGGAGGGTTTTGGA+AGG | + | tig0024530:49010-49029 | None:intergenic | 45.0% |
| ! | TGTGTTTGGATGGAGGGTTT+TGG | + | tig0024530:49014-49033 | None:intergenic | 45.0% |
| TTAGGGTGTGTTTGGATGGA+GGG | + | tig0024530:49020-49039 | None:intergenic | 45.0% | |
| TCCATCCAAACACACCCTAA+GGG | - | tig0024530:49020-49039 | Msa1417870:intron | 45.0% | |
| TTCCCGGGAAAGTTATTCCA+AGG | + | tig0024530:49076-49095 | None:intergenic | 45.0% | |
| AGAACGTGTGGGGTAAAGTA+GGG | - | tig0024530:49515-49534 | Msa1417870:intron | 45.0% | |
| !! | TGGGGTAAAGTAGGGGTATT+AGG | - | tig0024530:49523-49542 | Msa1417870:intron | 45.0% |
| !! | GGGGTAAAGTAGGGGTATTA+GGG | - | tig0024530:49524-49543 | Msa1417870:intron | 45.0% |
| !! | GGGTAAAGTAGGGGTATTAG+GGG | - | tig0024530:49525-49544 | Msa1417870:intron | 45.0% |
| ! | GGGGATTTTTACTCTGAACG+TGG | - | tig0024530:49544-49563 | Msa1417870:intron | 45.0% |
| TGAACGTGGAGTTCATTCCT+GGG | - | tig0024530:49558-49577 | Msa1417870:intron | 45.0% | |
| ! | TTTTTCCGGTCCTCTATTCC+TGG | - | tig0024530:49708-49727 | Msa1417870:intron | 45.0% |
| ! | TTTTCCGGTCCTCTATTCCT+GGG | - | tig0024530:49709-49728 | Msa1417870:intron | 45.0% |
| ! | GAGACATGAAATGGATTCCC+AGG | + | tig0024530:49729-49748 | None:intergenic | 45.0% |
| CATTTCACTTCGAGGTAGGT+TGG | + | tig0024530:49825-49844 | None:intergenic | 45.0% | |
| TGAAGCAGTATTGCTTAGGC+GGG | + | tig0024530:50185-50204 | None:intergenic | 45.0% | |
| CCACCATTGACGATCAATCT+TGG | + | tig0024530:50489-50508 | None:intergenic | 45.0% | |
| CCAAGATTGATCGTCAATGG+TGG | - | tig0024530:50486-50505 | Msa1417870:intron | 45.0% | |
| ATCACGTGACGTGTTTCAAG+TGG | + | tig0024530:50602-50621 | None:intergenic | 45.0% | |
| ACTTGAAACACGTCACGTGA+TGG | - | tig0024530:50601-50620 | Msa1417870:CDS | 45.0% | |
| AAAACAACGAACACTCCAGC+AGG | + | tig0024530:50757-50776 | None:intergenic | 45.0% | |
| ATTTGGACGGACCTTTGATC+TGG | - | tig0024530:50891-50910 | Msa1417870:intron | 45.0% | |
| CTGCATGGTACTAGAAAGAG+TGG | + | tig0024530:50927-50946 | None:intergenic | 45.0% | |
| GGAAGGAGCAAACTATTGTC+TGG | + | tig0024530:51005-51024 | None:intergenic | 45.0% | |
| AGATCAAGCAGAGGATTGGA+AGG | + | tig0024530:51022-51041 | None:intergenic | 45.0% | |
| CCAAAGATCAAGCAGAGGAT+TGG | + | tig0024530:51026-51045 | None:intergenic | 45.0% | |
| CCAATCCTCTGCTTGATCTT+TGG | - | tig0024530:51023-51042 | Msa1417870:intron | 45.0% | |
| GAACACCAAAGATCAAGCAG+AGG | + | tig0024530:51031-51050 | None:intergenic | 45.0% | |
| ! | TTTTCTAAGCCTGTGTGCGT+TGG | - | tig0024530:51172-51191 | Msa1417870:intron | 45.0% |
| GGCAAAACTGGCTACACTAA+TGG | + | tig0024530:51229-51248 | None:intergenic | 45.0% | |
| TACACTGAAGTGGGCAAAAC+TGG | + | tig0024530:51241-51260 | None:intergenic | 45.0% | |
| GTTGGTTGCTACACTGAAGT+GGG | + | tig0024530:51250-51269 | None:intergenic | 45.0% | |
| ! | TGTTGGTTGCTACACTGAAG+TGG | + | tig0024530:51251-51270 | None:intergenic | 45.0% |
| CTAAACTAGCATTGTCGCAG+TGG | - | tig0024530:51678-51697 | Msa1417870:intron | 45.0% | |
| ATTGTCGCAGTGGGAATTGA+GGG | - | tig0024530:51688-51707 | Msa1417870:intron | 45.0% | |
| ACGGTTCCATGCAAAGCATA+TGG | + | tig0024530:51846-51865 | None:intergenic | 45.0% | |
| !! | ATGGTGGACACTATGCATCA+CGG | + | tig0024530:51865-51884 | None:intergenic | 45.0% |
| CATTGTAAATTTGCACGCGG+AGG | - | tig0024530:51997-52016 | Msa1417870:intron | 45.0% | |
| ! | AATTTGCACGCGGAGGTTTT+AGG | - | tig0024530:52004-52023 | Msa1417870:intron | 45.0% |
| GTTGATGCAATACAGGCTTG+TGG | - | tig0024530:52026-52045 | Msa1417870:intron | 45.0% | |
| ! | GTCTACCATCAGCAGTCTTT+TGG | + | tig0024530:52055-52074 | None:intergenic | 45.0% |
| CTGCTGATGGTAGACGATTT+CGG | - | tig0024530:52060-52079 | Msa1417870:intron | 45.0% | |
| ATGGTAGACGATTTCGGAGT+GGG | - | tig0024530:52066-52085 | Msa1417870:intron | 45.0% | |
| !! | GGTTTGGCCTTATCATTTGC+TGG | - | tig0024530:52573-52592 | Msa1417870:CDS | 45.0% |
| ! | TCATTTGCTGGCAGTGATCA+AGG | - | tig0024530:52585-52604 | Msa1417870:CDS | 45.0% |
| AGGATGTAGTCTTCGCTTGA+GGG | + | tig0024530:52856-52875 | None:intergenic | 45.0% | |
| AAGGATGTAGTCTTCGCTTG+AGG | + | tig0024530:52857-52876 | None:intergenic | 45.0% | |
| AAAGGGTGGAGAGACCAAAT+AGG | + | tig0024530:52892-52911 | None:intergenic | 45.0% | |
| GAAACGAGGAAATGAAAGGG+TGG | + | tig0024530:52906-52925 | None:intergenic | 45.0% | |
| ATGGAAGAAGTGGGGTATAG+TGG | - | tig0024530:52985-53004 | Msa1417870:intron | 45.0% | |
| !! | TAATTAAAAAAAAAAAAGAA+CGG | + | tig0024530:51404-51423 | None:intergenic | 5.0% |
| !!! | TGTTTGGGAGGGGTTTTGGA+GGG | - | tig0024530:48812-48831 | Msa1417870:intron | 50.0% |
| !!! | ATGGAGGGTTTTGGAAGGGA+GGG | + | tig0024530:49005-49024 | None:intergenic | 50.0% |
| CTTAGGGTGTGTTTGGATGG+AGG | + | tig0024530:49021-49040 | None:intergenic | 50.0% | |
| CTCCATCCAAACACACCCTA+AGG | - | tig0024530:49019-49038 | Msa1417870:intron | 50.0% | |
| CCATCCAAACACACCCTAAG+GGG | - | tig0024530:49021-49040 | Msa1417870:intron | 50.0% | |
| CATCCAAACACACCCTAAGG+GGG | - | tig0024530:49022-49041 | Msa1417870:intron | 50.0% | |
| AAATTGGAGGGGAGAACGTG+TGG | - | tig0024530:49503-49522 | Msa1417870:intron | 50.0% | |
| AATTGGAGGGGAGAACGTGT+GGG | - | tig0024530:49504-49523 | Msa1417870:intron | 50.0% | |
| GAGAACGTGTGGGGTAAAGT+AGG | - | tig0024530:49514-49533 | Msa1417870:intron | 50.0% | |
| GAACGTGTGGGGTAAAGTAG+GGG | - | tig0024530:49516-49535 | Msa1417870:intron | 50.0% | |
| CTGAACGTGGAGTTCATTCC+TGG | - | tig0024530:49557-49576 | Msa1417870:intron | 50.0% | |
| ! | TTTTCCAACCCCTCTCTCAC+TGG | - | tig0024530:49589-49608 | Msa1417870:intron | 50.0% |
| TATTCCAGTGAGAGAGGGGT+TGG | + | tig0024530:49596-49615 | None:intergenic | 50.0% | |
| GATTCCCAGGAATAGAGGAC+CGG | + | tig0024530:49716-49735 | None:intergenic | 50.0% | |
| ! | CTTAATTTGGCTTCCCTCCC+TGG | - | tig0024530:50708-50727 | Msa1417870:intron | 50.0% |
| AATGAGTGGCCATTGAGCCA+GGG | + | tig0024530:50728-50747 | None:intergenic | 50.0% | |
| CCAGCAGGAGATTCAATGAG+TGG | + | tig0024530:50742-50761 | None:intergenic | 50.0% | |
| CCACTCATTGAATCTCCTGC+TGG | - | tig0024530:50739-50758 | Msa1417870:intron | 50.0% | |
| TCAGTAGTTTCCCCTTCACC+AGG | + | tig0024530:51198-51217 | None:intergenic | 50.0% | |
| CATTGTCGCAGTGGGAATTG+AGG | - | tig0024530:51687-51706 | Msa1417870:intron | 50.0% | |
| GATGCAATACAGGCTTGTGG+AGG | - | tig0024530:52029-52048 | Msa1417870:intron | 50.0% | |
| GATGGTAGACGATTTCGGAG+TGG | - | tig0024530:52065-52084 | Msa1417870:intron | 50.0% | |
| TGGTAGACGATTTCGGAGTG+GGG | - | tig0024530:52067-52086 | Msa1417870:intron | 50.0% | |
| !! | TTTTGGGTGGGGAGGAACTT+AGG | - | tig0024530:52191-52210 | Msa1417870:intron | 50.0% |
| ! | GGTCTGTTTGGGAGGGGTTT+TGG | - | tig0024530:48808-48827 | Msa1417870:intron | 55.0% |
| !! | CTGTTTGGGAGGGGTTTTGG+AGG | - | tig0024530:48811-48830 | Msa1417870:intron | 55.0% |
| !!! | GTTTGGGAGGGGTTTTGGAG+GGG | - | tig0024530:48813-48832 | Msa1417870:intron | 55.0% |
| !!! | GGTTTTGGAGGGGAGGACTT+TGG | - | tig0024530:48823-48842 | Msa1417870:intron | 55.0% |
| TTTGGAGGGGAGGACTTTGG+AGG | - | tig0024530:48826-48845 | Msa1417870:intron | 55.0% | |
| TTGGAGGGGAGGACTTTGGA+GGG | - | tig0024530:48827-48846 | Msa1417870:intron | 55.0% | |
| !!! | TGGAGGGTTTTGGAAGGGAG+GGG | + | tig0024530:49004-49023 | None:intergenic | 55.0% |
| !!! | GATGGAGGGTTTTGGAAGGG+AGG | + | tig0024530:49006-49025 | None:intergenic | 55.0% |
| CCCCTTAGGGTGTGTTTGGA+TGG | + | tig0024530:49024-49043 | None:intergenic | 55.0% | |
| ACACCCCCTTAGGGTGTGTT+TGG | + | tig0024530:49028-49047 | None:intergenic | 55.0% | |
| ATTGGAGGGGAGAACGTGTG+GGG | - | tig0024530:49505-49524 | Msa1417870:intron | 55.0% | |
| ! | TACACTGCTGCGGGTTGTCT+TGG | - | tig0024530:50005-50024 | Msa1417870:intron | 55.0% |
| CAATGAGTGGCCATTGAGCC+AGG | + | tig0024530:50729-50748 | None:intergenic | 55.0% | |
| GGAGGCCAAAAGACTGCTGA+TGG | - | tig0024530:52047-52066 | Msa1417870:intron | 55.0% | |
| GGTAGACGATTTCGGAGTGG+GGG | - | tig0024530:52068-52087 | Msa1417870:intron | 55.0% | |
| !!! | GGGTTTTGGAAGGGAGGGGA+GGG | + | tig0024530:49000-49019 | None:intergenic | 60.0% |
| !!! | AGGGTTTTGGAAGGGAGGGG+AGG | + | tig0024530:49001-49020 | None:intergenic | 60.0% |
| AGTGGCCATTGAGCCAGGGA+GGG | + | tig0024530:50724-50743 | None:intergenic | 60.0% | |
| ! | TAAGCCTGTGTGCGTTGGCC+TGG | - | tig0024530:51177-51196 | Msa1417870:intron | 60.0% |
| TTCACCAGGCCAACGCACAC+AGG | + | tig0024530:51184-51203 | None:intergenic | 60.0% | |
| ! | TGTGTGCGTTGGCCTGGTGA+AGG | - | tig0024530:51183-51202 | Msa1417870:intron | 60.0% |
| ! | GTGTGCGTTGGCCTGGTGAA+GGG | - | tig0024530:51184-51203 | Msa1417870:intron | 60.0% |
| ! | TGTGCGTTGGCCTGGTGAAG+GGG | - | tig0024530:51185-51204 | Msa1417870:intron | 60.0% |
| AGACGATTTCGGAGTGGGGG+TGG | - | tig0024530:52071-52090 | Msa1417870:intron | 60.0% | |
| !!! | TGGGAGGGGTTTTGGAGGGG+AGG | - | tig0024530:48816-48835 | Msa1417870:intron | 65.0% |
| GGCTTCCCTCCCTGGCTCAA+TGG | - | tig0024530:50716-50735 | Msa1417870:intron | 65.0% | |
| GAGTGGCCATTGAGCCAGGG+AGG | + | tig0024530:50725-50744 | None:intergenic | 65.0% | |
| GGAGTGGGGGTGGCATACTG+TGG | - | tig0024530:52081-52100 | Msa1417870:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024530 | gene | 47468 | 53142 | 47468 | ID=Msa1417870;Name=Msa1417870 |
| tig0024530 | mRNA | 47468 | 53142 | 47468 | ID=Msa1417870-mRNA-1;Parent=Msa1417870;Name=Msa1417870-mRNA-1;_AED=0.25;_eAED=0.25;_QI=144|1|1|1|0.75|0.6|5|375|257 |
| tig0024530 | exon | 47468 | 48100 | 47468 | ID=Msa1417870-mRNA-1:exon:113;Parent=Msa1417870-mRNA-1 |
| tig0024530 | exon | 48441 | 48584 | 48441 | ID=Msa1417870-mRNA-1:exon:112;Parent=Msa1417870-mRNA-1 |
| tig0024530 | exon | 50552 | 50657 | 50552 | ID=Msa1417870-mRNA-1:exon:111;Parent=Msa1417870-mRNA-1 |
| tig0024530 | exon | 52455 | 52742 | 52455 | ID=Msa1417870-mRNA-1:exon:110;Parent=Msa1417870-mRNA-1 |
| tig0024530 | exon | 53021 | 53142 | 53021 | ID=Msa1417870-mRNA-1:exon:109;Parent=Msa1417870-mRNA-1 |
| tig0024530 | five_prime_UTR | 53021 | 53142 | 53021 | ID=Msa1417870-mRNA-1:five_prime_utr;Parent=Msa1417870-mRNA-1 |
| tig0024530 | five_prime_UTR | 52721 | 52742 | 52721 | ID=Msa1417870-mRNA-1:five_prime_utr;Parent=Msa1417870-mRNA-1 |
| tig0024530 | CDS | 52455 | 52720 | 52455 | ID=Msa1417870-mRNA-1:cds;Parent=Msa1417870-mRNA-1 |
| tig0024530 | CDS | 50552 | 50657 | 50552 | ID=Msa1417870-mRNA-1:cds;Parent=Msa1417870-mRNA-1 |
| tig0024530 | CDS | 48441 | 48584 | 48441 | ID=Msa1417870-mRNA-1:cds;Parent=Msa1417870-mRNA-1 |
| tig0024530 | CDS | 47843 | 48100 | 47843 | ID=Msa1417870-mRNA-1:cds;Parent=Msa1417870-mRNA-1 |
| tig0024530 | three_prime_UTR | 47468 | 47842 | 47468 | ID=Msa1417870-mRNA-1:three_prime_utr;Parent=Msa1417870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
