Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0207930 | XP_013442068.1 | 88.000 | 200 | 19 | 2 | 1 | 196 | 1 | 199 | 1.68e-102 | 304 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0207930 | sp|P29602|CPC_CUCSA | 49.057 | 106 | 50 | 4 | 28 | 130 | 5 | 109 | 2.92e-23 | 93.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0207930 | A0A072TGI1 | 88.000 | 200 | 19 | 2 | 1 | 196 | 1 | 199 | 8.04e-103 | 304 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036580 | Msa0207930 | 0.803273 | 3.771266e-49 | -8.615850e-47 |
| Msa0046680 | Msa0207930 | 0.852452 | 4.573007e-61 | -8.615850e-47 |
| Msa0059880 | Msa0207930 | 0.817723 | 2.844335e-52 | -8.615850e-47 |
| Msa0064990 | Msa0207930 | 0.804688 | 1.915710e-49 | -8.615850e-47 |
| Msa0093530 | Msa0207930 | 0.820812 | 5.628684e-53 | -8.615850e-47 |
| Msa0095140 | Msa0207930 | -0.801407 | 9.134562e-49 | -8.615850e-47 |
| Msa0107830 | Msa0207930 | 0.834985 | 2.183539e-56 | -8.615850e-47 |
| Msa0109270 | Msa0207930 | 0.801700 | 7.956197e-49 | -8.615850e-47 |
| Msa0126960 | Msa0207930 | 0.821138 | 4.733679e-53 | -8.615850e-47 |
| Msa0129290 | Msa0207930 | 0.860070 | 2.668182e-63 | -8.615850e-47 |
| Msa0139270 | Msa0207930 | 0.814813 | 1.272233e-51 | -8.615850e-47 |
| Msa0143640 | Msa0207930 | 0.803973 | 2.699382e-49 | -8.615850e-47 |
| Msa0150910 | Msa0207930 | 0.831897 | 1.286383e-55 | -8.615850e-47 |
| Msa0176620 | Msa0207930 | 0.814291 | 1.660466e-51 | -8.615850e-47 |
| Msa0179450 | Msa0207930 | 0.807099 | 5.962967e-50 | -8.615850e-47 |
| Msa0196420 | Msa0207930 | 0.841519 | 4.524501e-58 | -8.615850e-47 |
| Msa0199860 | Msa0207930 | 0.817247 | 3.641328e-52 | -8.615850e-47 |
| Msa0200080 | Msa0207930 | 0.801557 | 8.512319e-49 | -8.615850e-47 |
| Msa0200090 | Msa0207930 | 0.834670 | 2.621148e-56 | -8.615850e-47 |
| Msa0207930 | Msa0207970 | 0.924771 | 4.509910e-90 | -8.615850e-47 |
| Msa0207930 | Msa0212550 | 0.818489 | 1.908857e-52 | -8.615850e-47 |
| Msa0207930 | Msa0214630 | 0.823144 | 1.622317e-53 | -8.615850e-47 |
| Msa0207930 | Msa0225910 | 0.801696 | 7.971909e-49 | -8.615850e-47 |
| Msa0207930 | Msa0238330 | 0.846743 | 1.793438e-59 | -8.615850e-47 |
| Msa0207930 | Msa0242390 | 0.800128 | 1.666255e-48 | -8.615850e-47 |
| Msa0207930 | Msa0255010 | 0.816107 | 6.556948e-52 | -8.615850e-47 |
| Msa0207930 | Msa0266640 | 0.821696 | 3.519728e-53 | -8.615850e-47 |
| Msa0207930 | Msa0266650 | 0.824010 | 1.017305e-53 | -8.615850e-47 |
| Msa0207930 | Msa0268220 | -0.800891 | 1.165070e-48 | -8.615850e-47 |
| Msa0207930 | Msa0271700 | 0.823332 | 1.466010e-53 | -8.615850e-47 |
| Msa0207930 | Msa0271720 | 0.814934 | 1.196232e-51 | -8.615850e-47 |
| Msa0207930 | Msa0274260 | 0.828344 | 9.470785e-55 | -8.615850e-47 |
| Msa0207930 | Msa0278950 | 0.815786 | 7.734017e-52 | -8.615850e-47 |
| Msa0207930 | Msa0291880 | 0.808468 | 3.051809e-50 | -8.615850e-47 |
| Msa0207930 | Msa0316230 | 0.835087 | 2.057804e-56 | -8.615850e-47 |
| Msa0207930 | Msa0318370 | 0.813865 | 2.061518e-51 | -8.615850e-47 |
| Msa0207930 | Msa0320130 | 0.830652 | 2.603082e-55 | -8.615850e-47 |
| Msa0207930 | Msa0320140 | 0.827698 | 1.355309e-54 | -8.615850e-47 |
| Msa0207930 | Msa0346170 | 0.814918 | 1.205947e-51 | -8.615850e-47 |
| Msa0207930 | Msa0353010 | 0.805604 | 1.232314e-49 | -8.615850e-47 |
| Msa0207930 | Msa0378240 | 0.809766 | 1.609105e-50 | -8.615850e-47 |
| Msa0207930 | Msa0390200 | 0.836117 | 1.129276e-56 | -8.615850e-47 |
| Msa0207930 | Msa0398690 | 0.800599 | 1.336464e-48 | -8.615850e-47 |
| Msa0207930 | Msa0420890 | 0.804246 | 2.368919e-49 | -8.615850e-47 |
| Msa0207930 | Msa0421080 | 0.840989 | 6.234445e-58 | -8.615850e-47 |
| Msa0207930 | Msa0423690 | 0.801091 | 1.060144e-48 | -8.615850e-47 |
| Msa0207930 | Msa0438520 | 0.801307 | 9.578045e-49 | -8.615850e-47 |
| Msa0207930 | Msa0447160 | 0.800813 | 1.208619e-48 | -8.615850e-47 |
| Msa0207930 | Msa0464300 | 0.817657 | 2.943171e-52 | -8.615850e-47 |
| Msa0207930 | Msa0464310 | 0.805567 | 1.254078e-49 | -8.615850e-47 |
| Msa0207930 | Msa0466850 | 0.853687 | 2.026318e-61 | -8.615850e-47 |
| Msa0207930 | Msa0489370 | 0.816001 | 6.924128e-52 | -8.615850e-47 |
| Msa0207930 | Msa0493870 | 0.802625 | 5.133756e-49 | -8.615850e-47 |
| Msa0207930 | Msa0510870 | 0.820760 | 5.786524e-53 | -8.615850e-47 |
| Msa0207930 | Msa0513670 | 0.852944 | 3.309826e-61 | -8.615850e-47 |
| Msa0207930 | Msa0533510 | 0.820409 | 6.964010e-53 | -8.615850e-47 |
| Msa0207930 | Msa0533520 | 0.825745 | 3.965232e-54 | -8.615850e-47 |
| Msa0207930 | Msa0535570 | 0.803330 | 3.669890e-49 | -8.615850e-47 |
| Msa0207930 | Msa0538450 | 0.827405 | 1.593505e-54 | -8.615850e-47 |
| Msa0207930 | Msa0538520 | 0.815413 | 9.361321e-52 | -8.615850e-47 |
| Msa0207930 | Msa0538530 | 0.800624 | 1.320808e-48 | -8.615850e-47 |
| Msa0207930 | Msa0546760 | 0.809857 | 1.538247e-50 | -8.615850e-47 |
| Msa0207930 | Msa0548760 | 0.818764 | 1.652836e-52 | -8.615850e-47 |
| Msa0207930 | Msa0554660 | 0.810827 | 9.496600e-51 | -8.615850e-47 |
| Msa0207930 | Msa0561830 | 0.801611 | 8.297392e-49 | -8.615850e-47 |
| Msa0207930 | Msa0565120 | 0.809700 | 1.662130e-50 | -8.615850e-47 |
| Msa0207930 | Msa0568110 | 0.864166 | 1.478571e-64 | -8.615850e-47 |
| Msa0207930 | Msa0570460 | 0.856665 | 2.759360e-62 | -8.615850e-47 |
| Msa0207930 | Msa0580840 | 0.810703 | 1.010328e-50 | -8.615850e-47 |
| Msa0207930 | Msa0589730 | 0.816017 | 6.868763e-52 | -8.615850e-47 |
| Msa0207930 | Msa0594320 | 0.808338 | 3.252650e-50 | -8.615850e-47 |
| Msa0207930 | Msa0594330 | 0.834281 | 3.281614e-56 | -8.615850e-47 |
| Msa0207930 | Msa0597820 | 0.802379 | 5.769320e-49 | -8.615850e-47 |
| Msa0207930 | Msa0599600 | 0.806331 | 8.663187e-50 | -8.615850e-47 |
| Msa0207930 | Msa0614960 | 0.803145 | 4.009322e-49 | -8.615850e-47 |
| Msa0207930 | Msa0628200 | 0.834906 | 2.286258e-56 | -8.615850e-47 |
| Msa0207930 | Msa0629030 | 0.854434 | 1.234434e-61 | -8.615850e-47 |
| Msa0207930 | Msa0629040 | 0.858605 | 7.346077e-63 | -8.615850e-47 |
| Msa0207930 | Msa0630130 | 0.815830 | 7.561225e-52 | -8.615850e-47 |
| Msa0207930 | Msa0634290 | 0.810221 | 1.283555e-50 | -8.615850e-47 |
| Msa0207930 | Msa0639400 | 0.811560 | 6.586319e-51 | -8.615850e-47 |
| Msa0207930 | Msa0639410 | 0.830360 | 3.067708e-55 | -8.615850e-47 |
| Msa0207930 | Msa0645120 | 0.810073 | 1.382029e-50 | -8.615850e-47 |
| Msa0207930 | Msa0651820 | 0.821181 | 4.629192e-53 | -8.615850e-47 |
| Msa0207930 | Msa0652590 | 0.803469 | 3.434878e-49 | -8.615850e-47 |
| Msa0207930 | Msa0655370 | 0.801765 | 7.714022e-49 | -8.615850e-47 |
| Msa0207930 | Msa0657260 | 0.849927 | 2.361052e-60 | -8.615850e-47 |
| Msa0207930 | Msa0666580 | 0.851833 | 6.858668e-61 | -8.615850e-47 |
| Msa0207930 | Msa0668210 | 0.800981 | 1.116908e-48 | -8.615850e-47 |
| Msa0207930 | Msa0668220 | 0.814237 | 1.706120e-51 | -8.615850e-47 |
| Msa0207930 | Msa0678620 | 0.806937 | 6.452845e-50 | -8.615850e-47 |
| Msa0207930 | Msa0682410 | 0.801331 | 9.469816e-49 | -8.615850e-47 |
| Msa0207930 | Msa0682420 | 0.816271 | 6.026374e-52 | -8.615850e-47 |
| Msa0207930 | Msa0684600 | 0.809624 | 1.725682e-50 | -8.615850e-47 |
| Msa0207930 | Msa0694320 | 0.806222 | 9.136880e-50 | -8.615850e-47 |
| Msa0207930 | Msa0701490 | 0.852949 | 3.300232e-61 | -8.615850e-47 |
| Msa0207930 | Msa0701560 | 0.853990 | 1.658388e-61 | -8.615850e-47 |
| Msa0207930 | Msa0704560 | 0.822239 | 2.634153e-53 | -8.615850e-47 |
| Msa0207930 | Msa0715260 | 0.800450 | 1.432971e-48 | -8.615850e-47 |
| Msa0207930 | Msa0716620 | 0.833101 | 6.468781e-56 | -8.615850e-47 |
| Msa0207930 | Msa0721260 | 0.801839 | 7.450692e-49 | -8.615850e-47 |
| Msa0207930 | Msa0727480 | 0.811898 | 5.561020e-51 | -8.615850e-47 |
| Msa0207930 | Msa0728520 | 0.872790 | 2.424943e-67 | -8.615850e-47 |
| Msa0207930 | Msa0732040 | 0.818607 | 1.794638e-52 | -8.615850e-47 |
| Msa0207930 | Msa0738570 | 0.850956 | 1.214339e-60 | -8.615850e-47 |
| Msa0207930 | Msa0738660 | 0.832851 | 7.468102e-56 | -8.615850e-47 |
| Msa0207930 | Msa0753410 | 0.836883 | 7.207146e-57 | -8.615850e-47 |
| Msa0207930 | Msa0757240 | 0.801303 | 9.594573e-49 | -8.615850e-47 |
| Msa0207930 | Msa0772350 | 0.841810 | 3.791210e-58 | -8.615850e-47 |
| Msa0207930 | Msa0773020 | 0.826227 | 3.046016e-54 | -8.615850e-47 |
| Msa0207930 | Msa0776540 | 0.875789 | 2.336319e-68 | -8.615850e-47 |
| Msa0207930 | Msa0777070 | 0.807180 | 5.733698e-50 | -8.615850e-47 |
| Msa0207930 | Msa0783580 | 0.834364 | 3.128737e-56 | -8.615850e-47 |
| Msa0207930 | Msa0795320 | 0.815453 | 9.175227e-52 | -8.615850e-47 |
| Msa0207930 | Msa0795330 | 0.825889 | 3.665357e-54 | -8.615850e-47 |
| Msa0207930 | Msa0819110 | 0.846326 | 2.330740e-59 | -8.615850e-47 |
| Msa0207930 | Msa0826360 | 0.829537 | 4.870081e-55 | -8.615850e-47 |
| Msa0207930 | Msa0837550 | 0.846528 | 2.052652e-59 | -8.615850e-47 |
| Msa0207930 | Msa0854840 | 0.809702 | 1.660487e-50 | -8.615850e-47 |
| Msa0207930 | Msa0859230 | 0.847845 | 8.935368e-60 | -8.615850e-47 |
| Msa0207930 | Msa0859250 | 0.857346 | 1.737783e-62 | -8.615850e-47 |
| Msa0207930 | Msa0861730 | 0.802908 | 4.488114e-49 | -8.615850e-47 |
| Msa0207930 | Msa0865830 | 0.816399 | 5.643376e-52 | -8.615850e-47 |
| Msa0207930 | Msa0868820 | 0.811495 | 6.803569e-51 | -8.615850e-47 |
| Msa0207930 | Msa0874750 | 0.812185 | 4.815669e-51 | -8.615850e-47 |
| Msa0207930 | Msa0883640 | 0.803237 | 3.836465e-49 | -8.615850e-47 |
| Msa0207930 | Msa0896920 | 0.817504 | 3.186285e-52 | -8.615850e-47 |
| Msa0207930 | Msa0910570 | 0.800685 | 1.283478e-48 | -8.615850e-47 |
| Msa0207930 | Msa0910590 | 0.818856 | 1.575729e-52 | -8.615850e-47 |
| Msa0207930 | Msa0910830 | 0.814120 | 1.811182e-51 | -8.615850e-47 |
| Msa0207930 | Msa0913550 | 0.814279 | 1.670694e-51 | -8.615850e-47 |
| Msa0207930 | Msa0932890 | 0.807186 | 5.717012e-50 | -8.615850e-47 |
| Msa0207930 | Msa0933580 | 0.808878 | 2.494818e-50 | -8.615850e-47 |
| Msa0207930 | Msa0933610 | 0.809943 | 1.473696e-50 | -8.615850e-47 |
| Msa0207930 | Msa0945320 | 0.801674 | 8.054746e-49 | -8.615850e-47 |
| Msa0207930 | Msa0948430 | 0.816333 | 5.837191e-52 | -8.615850e-47 |
| Msa0207930 | Msa0948460 | 0.801950 | 7.069324e-49 | -8.615850e-47 |
| Msa0207930 | Msa0951060 | 0.809279 | 2.047117e-50 | -8.615850e-47 |
| Msa0207930 | Msa0951150 | 0.802976 | 4.344387e-49 | -8.615850e-47 |
| Msa0207930 | Msa0960090 | 0.804943 | 1.694516e-49 | -8.615850e-47 |
| Msa0207930 | Msa0976400 | 0.815208 | 1.040180e-51 | -8.615850e-47 |
| Msa0207930 | Msa0985250 | 0.817814 | 2.713482e-52 | -8.615850e-47 |
| Msa0207930 | Msa0985290 | 0.803358 | 3.621221e-49 | -8.615850e-47 |
| Msa0207930 | Msa0985380 | 0.815663 | 8.237494e-52 | -8.615850e-47 |
| Msa0207930 | Msa0985700 | 0.803338 | 3.656793e-49 | -8.615850e-47 |
| Msa0207930 | Msa0993450 | 0.801262 | 9.783575e-49 | -8.615850e-47 |
| Msa0207930 | Msa1006170 | 0.808856 | 2.521582e-50 | -8.615850e-47 |
| Msa0207930 | Msa1023430 | 0.857050 | 2.125478e-62 | -8.615850e-47 |
| Msa0207930 | Msa1024350 | 0.831196 | 1.914067e-55 | -8.615850e-47 |
| Msa0207930 | Msa1040330 | 0.823560 | 1.296732e-53 | -8.615850e-47 |
| Msa0207930 | Msa1061670 | 0.805115 | 1.559637e-49 | -8.615850e-47 |
| Msa0207930 | Msa1061840 | 0.866651 | 2.439242e-65 | -8.615850e-47 |
| Msa0207930 | Msa1064940 | 0.806189 | 9.283378e-50 | -8.615850e-47 |
| Msa0207930 | Msa1069250 | 0.803521 | 3.351090e-49 | -8.615850e-47 |
| Msa0207930 | Msa1083100 | 0.816461 | 5.465221e-52 | -8.615850e-47 |
| Msa0207930 | Msa1087380 | 0.826870 | 2.139494e-54 | -8.615850e-47 |
| Msa0207930 | Msa1107510 | 0.846206 | 2.512975e-59 | -8.615850e-47 |
| Msa0207930 | Msa1109880 | 0.803742 | 3.015099e-49 | -8.615850e-47 |
| Msa0207930 | Msa1109890 | 0.816897 | 4.364240e-52 | -8.615850e-47 |
| Msa0207930 | Msa1127940 | 0.854308 | 1.341955e-61 | -8.615850e-47 |
| Msa0207930 | Msa1151070 | 0.862676 | 4.280516e-64 | -8.615850e-47 |
| Msa0207930 | Msa1165860 | 0.854004 | 1.642523e-61 | -8.615850e-47 |
| Msa0207930 | Msa1208830 | 0.829550 | 4.833957e-55 | -8.615850e-47 |
| Msa0207930 | Msa1208910 | 0.838629 | 2.566504e-57 | -8.615850e-47 |
| Msa0207930 | Msa1216600 | 0.803720 | 3.046158e-49 | -8.615850e-47 |
| Msa0207930 | Msa1223560 | 0.813077 | 3.072327e-51 | -8.615850e-47 |
| Msa0207930 | Msa1262810 | 0.812513 | 4.082172e-51 | -8.615850e-47 |
| Msa0207930 | Msa1263120 | 0.801842 | 7.440874e-49 | -8.615850e-47 |
| Msa0207930 | Msa1263500 | 0.812510 | 4.089112e-51 | -8.615850e-47 |
| Msa0207930 | Msa1300930 | 0.808856 | 2.521952e-50 | -8.615850e-47 |
| Msa0207930 | Msa1323030 | 0.811407 | 7.109538e-51 | -8.615850e-47 |
| Msa0207930 | Msa1331950 | 0.808689 | 2.737019e-50 | -8.615850e-47 |
| Msa0207930 | Msa1355330 | 0.814214 | 1.726646e-51 | -8.615850e-47 |
| Msa0207930 | Msa1387610 | 0.800490 | 1.406683e-48 | -8.615850e-47 |
| Msa0207930 | Msa1394090 | -0.803723 | 3.042902e-49 | -8.615850e-47 |
| Msa0207930 | Msa1395690 | 0.815760 | 7.837601e-52 | -8.615850e-47 |
| Msa0207930 | Msa1398120 | 0.820856 | 5.499270e-53 | -8.615850e-47 |
| Msa0207930 | Msa1399430 | -0.815697 | 8.095028e-52 | -8.615850e-47 |
| Msa0207930 | Msa1411550 | 0.805779 | 1.132029e-49 | -8.615850e-47 |
| Msa0207930 | Msa1419210 | 0.851490 | 8.580665e-61 | -8.615850e-47 |
| Msa0207930 | Msa1427000 | 0.821273 | 4.407440e-53 | -8.615850e-47 |
| Msa0207930 | Msa1432180 | 0.807594 | 4.682996e-50 | -8.615850e-47 |
| Msa0207930 | Msa1438160 | 0.812135 | 4.937893e-51 | -8.615850e-47 |
| Msa0207930 | Msa1439780 | 0.822637 | 2.129027e-53 | -8.615850e-47 |
| Msa0207930 | Msa1445900 | 0.802986 | 4.323778e-49 | -8.615850e-47 |
| Msa0207930 | Msa1448150 | 0.813012 | 3.175279e-51 | -8.615850e-47 |
| Msa0207930 | Msa1449470 | 0.811436 | 7.006603e-51 | -8.615850e-47 |
| Msa0207930 | Msa1455760 | 0.805664 | 1.196636e-49 | -8.615850e-47 |
| Msa0207930 | Msa1459610 | 0.802406 | 5.696940e-49 | -8.615850e-47 |
| Msa0207930 | Msa1459930 | 0.827619 | 1.415899e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0207930 | MtrunA17_Chr2g0306461 | 88.000 | 200 | 19 | 2 | 1 | 196 | 1 | 199 | 1.55e-106 | 304 |
| Msa0207930 | MtrunA17_Chr4g0033131 | 51.244 | 201 | 65 | 5 | 1 | 197 | 1 | 172 | 3.74e-58 | 180 |
| Msa0207930 | MtrunA17_Chr4g0033531 | 51.244 | 201 | 65 | 5 | 1 | 197 | 1 | 172 | 3.74e-58 | 180 |
| Msa0207930 | MtrunA17_Chr4g0064041 | 48.611 | 144 | 71 | 3 | 1 | 141 | 1 | 144 | 8.72e-36 | 128 |
| Msa0207930 | MtrunA17_Chr4g0064041 | 49.000 | 100 | 50 | 1 | 28 | 126 | 191 | 290 | 3.75e-27 | 105 |
| Msa0207930 | MtrunA17_Chr6g0483981 | 42.373 | 177 | 92 | 5 | 9 | 175 | 8 | 184 | 4.96e-33 | 124 |
| Msa0207930 | MtrunA17_Chr4g0064031 | 44.755 | 143 | 62 | 5 | 17 | 155 | 17 | 146 | 1.86e-31 | 112 |
| Msa0207930 | MtrunA17_Chr3g0132441 | 44.118 | 102 | 53 | 1 | 25 | 126 | 23 | 120 | 7.09e-25 | 95.9 |
| Msa0207930 | MtrunA17_Chr2g0324721 | 34.615 | 182 | 111 | 5 | 1 | 178 | 1 | 178 | 1.30e-23 | 92.8 |
| Msa0207930 | MtrunA17_Chr8g0387804 | 37.984 | 129 | 77 | 3 | 1 | 127 | 1 | 128 | 1.43e-23 | 90.9 |
| Msa0207930 | MtrunA17_Chr2g0331181 | 37.748 | 151 | 88 | 4 | 2 | 151 | 3 | 148 | 4.83e-23 | 91.3 |
| Msa0207930 | MtrunA17_Chr3g0132431 | 37.500 | 128 | 70 | 2 | 25 | 152 | 23 | 140 | 1.41e-22 | 89.7 |
| Msa0207930 | MtrunA17_Chr2g0323021 | 35.878 | 131 | 79 | 2 | 8 | 137 | 5 | 131 | 4.47e-21 | 87.0 |
| Msa0207930 | MtrunA17_Chr2g0317231 | 36.220 | 127 | 76 | 3 | 3 | 128 | 2 | 124 | 9.40e-21 | 89.4 |
| Msa0207930 | MtrunA17_Chr8g0335531 | 34.884 | 172 | 91 | 5 | 7 | 163 | 1 | 166 | 2.46e-20 | 84.0 |
| Msa0207930 | MtrunA17_Chr8g0360371 | 36.170 | 141 | 77 | 5 | 10 | 148 | 7 | 136 | 4.01e-20 | 85.9 |
| Msa0207930 | MtrunA17_Chr5g0394321 | 31.447 | 159 | 101 | 4 | 8 | 165 | 7 | 158 | 8.69e-20 | 82.4 |
| Msa0207930 | MtrunA17_Chr3g0132701 | 38.281 | 128 | 71 | 4 | 1 | 126 | 1 | 122 | 1.69e-19 | 82.4 |
| Msa0207930 | MtrunA17_Chr3g0132511 | 38.281 | 128 | 71 | 4 | 1 | 126 | 1 | 122 | 2.60e-19 | 82.0 |
| Msa0207930 | MtrunA17_Chr1g0150131 | 32.877 | 146 | 86 | 4 | 7 | 148 | 12 | 149 | 1.90e-18 | 79.0 |
| Msa0207930 | MtrunA17_Chr6g0481491 | 34.711 | 121 | 75 | 1 | 10 | 130 | 10 | 126 | 3.70e-18 | 79.0 |
| Msa0207930 | MtrunA17_Chr4g0062341 | 29.193 | 161 | 106 | 3 | 9 | 167 | 13 | 167 | 3.81e-18 | 78.2 |
| Msa0207930 | MtrunA17_Chr4g0062311 | 29.193 | 161 | 106 | 3 | 9 | 167 | 13 | 167 | 3.81e-18 | 78.2 |
| Msa0207930 | MtrunA17_Chr2g0301431 | 37.815 | 119 | 63 | 4 | 7 | 124 | 14 | 122 | 5.52e-18 | 76.3 |
| Msa0207930 | MtrunA17_Chr4g0040291 | 34.694 | 147 | 83 | 5 | 24 | 163 | 21 | 161 | 9.38e-18 | 77.4 |
| Msa0207930 | MtrunA17_Chr3g0136871 | 35.036 | 137 | 83 | 3 | 25 | 155 | 24 | 160 | 9.91e-18 | 77.0 |
| Msa0207930 | MtrunA17_Chr8g0335571 | 38.318 | 107 | 60 | 2 | 25 | 129 | 21 | 123 | 2.27e-17 | 76.6 |
| Msa0207930 | MtrunA17_Chr8g0385021 | 34.146 | 123 | 77 | 3 | 7 | 126 | 1 | 122 | 2.71e-17 | 77.8 |
| Msa0207930 | MtrunA17_Chr8g0385031 | 34.146 | 123 | 77 | 3 | 7 | 126 | 1 | 122 | 3.42e-17 | 77.8 |
| Msa0207930 | MtrunA17_Chr7g0253761 | 32.500 | 120 | 75 | 3 | 10 | 127 | 7 | 122 | 6.34e-17 | 74.7 |
| Msa0207930 | MtrunA17_Chr1g0196801 | 32.117 | 137 | 87 | 2 | 25 | 159 | 20 | 152 | 1.06e-16 | 74.3 |
| Msa0207930 | MtrunA17_Chr2g0319611 | 28.333 | 240 | 110 | 8 | 20 | 197 | 18 | 257 | 1.69e-16 | 75.5 |
| Msa0207930 | MtrunA17_Chr3g0125791 | 38.095 | 105 | 57 | 3 | 21 | 124 | 26 | 123 | 2.62e-16 | 72.0 |
| Msa0207930 | MtrunA17_Chr8g0380901 | 32.000 | 125 | 77 | 3 | 1 | 124 | 1 | 118 | 3.22e-16 | 71.6 |
| Msa0207930 | MtrunA17_Chr7g0253631 | 34.426 | 122 | 74 | 3 | 8 | 127 | 5 | 122 | 3.94e-16 | 73.9 |
| Msa0207930 | MtrunA17_Chr2g0324711 | 31.452 | 124 | 82 | 2 | 4 | 126 | 1 | 122 | 4.19e-16 | 75.5 |
| Msa0207930 | MtrunA17_Chr6g0458331 | 35.455 | 110 | 69 | 2 | 27 | 135 | 36 | 144 | 1.48e-15 | 70.9 |
| Msa0207930 | MtrunA17_Chr1g0205701 | 27.273 | 154 | 109 | 2 | 12 | 164 | 9 | 160 | 2.50e-15 | 70.9 |
| Msa0207930 | MtrunA17_Chr4g0039721 | 27.564 | 156 | 104 | 3 | 9 | 156 | 13 | 167 | 3.43e-15 | 70.5 |
| Msa0207930 | MtrunA17_Chr1g0211101 | 31.783 | 129 | 78 | 5 | 7 | 132 | 14 | 135 | 5.31e-15 | 69.7 |
| Msa0207930 | MtrunA17_Chr8g0380711 | 36.792 | 106 | 58 | 4 | 21 | 124 | 21 | 119 | 7.49e-15 | 67.8 |
| Msa0207930 | MtrunA17_Chr6g0459441 | 36.893 | 103 | 60 | 3 | 25 | 126 | 23 | 121 | 2.61e-14 | 67.8 |
| Msa0207930 | MtrunA17_Chr7g0253641 | 32.773 | 119 | 74 | 3 | 10 | 126 | 7 | 121 | 2.77e-14 | 68.9 |
| Msa0207930 | MtrunA17_Chr1g0185541 | 47.458 | 59 | 31 | 0 | 69 | 127 | 13 | 71 | 6.34e-14 | 64.3 |
| Msa0207930 | MtrunA17_Chr3g0132411 | 34.091 | 132 | 81 | 2 | 3 | 132 | 38 | 165 | 7.03e-14 | 66.6 |
| Msa0207930 | MtrunA17_Chr4g0041811 | 27.000 | 200 | 124 | 5 | 4 | 183 | 6 | 203 | 1.97e-13 | 66.2 |
| Msa0207930 | MtrunA17_Chr3g0125761 | 30.833 | 120 | 75 | 3 | 6 | 124 | 11 | 123 | 7.16e-13 | 62.8 |
| Msa0207930 | MtrunA17_Chr7g0253701 | 29.600 | 125 | 81 | 4 | 8 | 129 | 5 | 125 | 8.38e-13 | 63.5 |
| Msa0207930 | MtrunA17_Chr7g0253671 | 29.600 | 125 | 81 | 4 | 8 | 129 | 5 | 125 | 8.38e-13 | 63.5 |
| Msa0207930 | MtrunA17_Chr7g0256441 | 32.353 | 136 | 71 | 4 | 25 | 155 | 24 | 143 | 2.82e-12 | 61.6 |
| Msa0207930 | MtrunA17_Chr6g0453801 | 30.939 | 181 | 99 | 8 | 1 | 178 | 10 | 167 | 3.35e-12 | 62.0 |
| Msa0207930 | MtrunA17_Chr6g0453921 | 33.103 | 145 | 82 | 7 | 9 | 149 | 18 | 151 | 3.79e-12 | 62.0 |
| Msa0207930 | MtrunA17_Chr7g0253731 | 29.730 | 111 | 72 | 3 | 12 | 120 | 8 | 114 | 4.16e-12 | 61.6 |
| Msa0207930 | MtrunA17_Chr8g0385041 | 29.412 | 119 | 80 | 3 | 9 | 126 | 6 | 121 | 1.02e-11 | 62.4 |
| Msa0207930 | MtrunA17_Chr7g0253681 | 28.571 | 126 | 82 | 4 | 8 | 129 | 5 | 126 | 1.32e-11 | 60.5 |
| Msa0207930 | MtrunA17_Chr4g0073901 | 28.947 | 152 | 102 | 4 | 9 | 157 | 9 | 157 | 2.10e-11 | 60.1 |
| Msa0207930 | MtrunA17_Chr4g0073921 | 32.061 | 131 | 82 | 4 | 6 | 129 | 2 | 132 | 3.18e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0207930 | AT5G20230.1 | 41.912 | 136 | 66 | 4 | 27 | 161 | 24 | 147 | 4.94e-23 | 91.7 |
| Msa0207930 | AT5G53870.2 | 35.638 | 188 | 112 | 5 | 7 | 188 | 10 | 194 | 7.95e-23 | 94.4 |
| Msa0207930 | AT5G53870.1 | 35.638 | 188 | 112 | 5 | 7 | 188 | 10 | 194 | 1.26e-22 | 94.0 |
| Msa0207930 | AT2G32300.1 | 39.286 | 140 | 79 | 4 | 5 | 143 | 4 | 138 | 1.62e-22 | 92.0 |
| Msa0207930 | AT2G32300.2 | 38.235 | 136 | 79 | 3 | 9 | 143 | 37 | 168 | 3.88e-22 | 91.3 |
| Msa0207930 | AT2G25060.1 | 35.065 | 154 | 83 | 4 | 7 | 150 | 17 | 163 | 2.15e-21 | 87.0 |
| Msa0207930 | AT3G20570.1 | 33.511 | 188 | 113 | 6 | 5 | 182 | 3 | 188 | 2.97e-20 | 84.7 |
| Msa0207930 | AT4G27520.1 | 32.432 | 148 | 91 | 4 | 3 | 143 | 5 | 150 | 4.72e-20 | 86.7 |
| Msa0207930 | AT3G17675.1 | 29.921 | 127 | 84 | 2 | 2 | 127 | 6 | 128 | 1.29e-19 | 80.9 |
| Msa0207930 | AT4G28365.1 | 31.034 | 203 | 118 | 9 | 6 | 197 | 8 | 199 | 1.06e-18 | 80.5 |
| Msa0207930 | AT1G72230.1 | 39.669 | 121 | 68 | 2 | 46 | 164 | 37 | 154 | 1.98e-18 | 79.3 |
| Msa0207930 | AT5G07475.1 | 30.000 | 150 | 96 | 3 | 1 | 148 | 1 | 143 | 1.05e-17 | 77.8 |
| Msa0207930 | AT4G31840.1 | 29.050 | 179 | 101 | 4 | 19 | 195 | 18 | 172 | 1.50e-17 | 77.0 |
| Msa0207930 | AT3G60270.1 | 36.000 | 100 | 60 | 1 | 30 | 129 | 28 | 123 | 2.99e-17 | 76.3 |
| Msa0207930 | AT2G26720.1 | 33.582 | 134 | 78 | 4 | 9 | 138 | 14 | 140 | 1.04e-16 | 75.1 |
| Msa0207930 | AT3G27200.1 | 28.800 | 125 | 83 | 3 | 4 | 126 | 1 | 121 | 5.25e-16 | 72.8 |
| Msa0207930 | AT5G26330.1 | 33.333 | 123 | 77 | 3 | 7 | 126 | 1 | 121 | 3.03e-15 | 70.9 |
| Msa0207930 | AT2G31050.1 | 36.522 | 115 | 66 | 3 | 28 | 138 | 29 | 140 | 1.48e-14 | 69.3 |
| Msa0207930 | AT4G32490.1 | 31.655 | 139 | 87 | 5 | 3 | 138 | 5 | 138 | 5.14e-14 | 68.2 |
| Msa0207930 | AT1G79800.1 | 32.609 | 138 | 84 | 3 | 9 | 138 | 15 | 151 | 6.33e-14 | 67.4 |
| Msa0207930 | AT1G22480.1 | 41.772 | 79 | 46 | 0 | 53 | 131 | 40 | 118 | 1.19e-13 | 66.2 |
| Msa0207930 | AT3G18590.1 | 32.540 | 126 | 76 | 4 | 5 | 126 | 6 | 126 | 1.46e-13 | 66.6 |
| Msa0207930 | AT5G57920.1 | 28.099 | 121 | 85 | 2 | 8 | 126 | 3 | 123 | 5.13e-13 | 64.7 |
| Msa0207930 | AT3G60280.1 | 34.286 | 105 | 65 | 1 | 25 | 129 | 21 | 121 | 6.98e-13 | 65.1 |
| Msa0207930 | AT5G57920.3 | 24.118 | 170 | 112 | 4 | 1 | 153 | 18 | 187 | 7.82e-13 | 65.1 |
| Msa0207930 | AT5G14345.1 | 31.132 | 106 | 71 | 2 | 35 | 139 | 23 | 127 | 9.42e-13 | 63.5 |
| Msa0207930 | AT4G30590.1 | 32.039 | 103 | 68 | 2 | 30 | 130 | 30 | 132 | 1.80e-12 | 63.5 |
| Msa0207930 | AT2G44790.1 | 34.810 | 158 | 96 | 4 | 46 | 197 | 42 | 198 | 6.35e-12 | 62.4 |
| Msa0207930 | AT5G57920.2 | 31.313 | 99 | 66 | 2 | 30 | 126 | 24 | 122 | 1.20e-11 | 61.2 |
| Msa0207930 | AT5G15350.1 | 34.965 | 143 | 78 | 7 | 12 | 150 | 12 | 143 | 1.33e-11 | 60.8 |
| Msa0207930 | AT1G48940.1 | 28.571 | 119 | 79 | 3 | 10 | 126 | 11 | 125 | 2.03e-11 | 60.5 |
| Msa0207930 | AT2G27035.1 | 32.667 | 150 | 86 | 7 | 8 | 154 | 8 | 145 | 5.81e-11 | 58.9 |
| Msa0207930 | AT2G02850.1 | 30.000 | 120 | 74 | 4 | 8 | 124 | 14 | 126 | 6.73e-11 | 58.2 |
Find 71 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGTGTGGTTTGTGTTTA+AGG | 0.142559 | 2_1:-40956032 | None:intergenic |
| AAACTTTAACGCTTAGCTTT+TGG | 0.290349 | 2_1:-40957726 | None:intergenic |
| AATTGCAACATTAATCAAAA+TGG | 0.321277 | 2_1:+40957610 | Msa0207930:CDS |
| TTAGTATTTGATATACATAT+TGG | 0.336692 | 2_1:+40958050 | Msa0207930:three_prime_UTR |
| CTGTTAAGAGTAACTCTTGC+TGG | 0.373715 | 2_1:-40957652 | None:intergenic |
| TAGTATTTGATATACATATT+GGG | 0.374527 | 2_1:+40958051 | Msa0207930:three_prime_UTR |
| CTGGTCCTGTTGTTATGACT+TGG | 0.377013 | 2_1:-40957633 | None:intergenic |
| GATTAATAAAAGTTATCCTT+TGG | 0.386122 | 2_1:+40958157 | Msa0207930:three_prime_UTR |
| ACCATTCAAGGTCATTGTTC+CGG | 0.394011 | 2_1:+40957700 | Msa0207930:CDS |
| ATTGCTTGAATTGAATTTGA+AGG | 0.406033 | 2_1:-40955968 | None:intergenic |
| ATAAACACAAGTACTCAAAC+AGG | 0.409733 | 2_1:+40956004 | Msa0207930:five_prime_UTR |
| ATGATAACCGCAATGAGAAC+AGG | 0.411992 | 2_1:-40957925 | None:intergenic |
| TAAATTGTTAAAAGAGTGGT+TGG | 0.426559 | 2_1:-40955833 | None:intergenic |
| GGAGTAGATGTAGGAGGAGT+AGG | 0.442205 | 2_1:-40957775 | None:intergenic |
| AGAGTTACTCTTAACAGAAC+TGG | 0.466599 | 2_1:+40957658 | Msa0207930:CDS |
| ACCGGAACAATGACCTTGAA+TGG | 0.487199 | 2_1:-40957701 | None:intergenic |
| GTAGGAGGAGTAGGAGAAGG+AGG | 0.487629 | 2_1:-40957766 | None:intergenic |
| CGGCGAAGGTGTTCCTCCGC+TGG | 0.488502 | 2_1:-40957833 | None:intergenic |
| CCTCCGCTGGTAGGTGGAGT+AGG | 0.489177 | 2_1:-40957820 | None:intergenic |
| TTGTTTGAATGTATTATTGG+CGG | 0.499396 | 2_1:-40956214 | None:intergenic |
| CATACTGTTGGAGGCACCAC+TGG | 0.499434 | 2_1:+40956147 | Msa0207930:CDS |
| AATGGCCAAGTCATAACAAC+AGG | 0.504661 | 2_1:+40957628 | Msa0207930:CDS |
| TGGAGGAGTTGCATCGGGCC+CGG | 0.506285 | 2_1:-40957866 | None:intergenic |
| GGTGATGGAGGAGTTGCATC+GGG | 0.508604 | 2_1:-40957871 | None:intergenic |
| TGGTGATGGAGGAGTTGCAT+CGG | 0.517659 | 2_1:-40957872 | None:intergenic |
| GTAGTAGCTGAGCCTGGTGA+TGG | 0.519893 | 2_1:-40957886 | None:intergenic |
| TAAAACGAAGCGCCGCCACT+TGG | 0.519955 | 2_1:-40956180 | None:intergenic |
| TAATTAAATTGTTAAAAGAG+TGG | 0.521418 | 2_1:-40955837 | None:intergenic |
| GGAGTTGCATCGGGCCCGGT+GGG | 0.523382 | 2_1:-40957862 | None:intergenic |
| GTAGGAGGAGGAGTAGATGT+AGG | 0.523768 | 2_1:-40957784 | None:intergenic |
| TTCAGCAACAGTGTGGCCTC+CGG | 0.526784 | 2_1:-40957566 | None:intergenic |
| TCTACTCCTCCTCCTACATC+AGG | 0.528805 | 2_1:+40957790 | Msa0207930:CDS |
| AGGAGAAGGAGGAGAAGTCG+AGG | 0.539764 | 2_1:-40957755 | None:intergenic |
| GAGGCAGCAGATCATACTGT+TGG | 0.539869 | 2_1:+40956135 | Msa0207930:CDS |
| CACTGTTGCTGAAGTAAGCA+AGG | 0.543847 | 2_1:+40957576 | Msa0207930:CDS |
| AGGAGTTGCATCGGGCCCGG+TGG | 0.547277 | 2_1:-40957863 | None:intergenic |
| TCGGGCCCGGTGGGAGATGA+CGG | 0.548024 | 2_1:-40957853 | None:intergenic |
| GAAGGTGTTCCTCCGCTGGT+AGG | 0.551016 | 2_1:-40957829 | None:intergenic |
| AGTCAAGCAAGCACATCAAA+CGG | 0.551650 | 2_1:-40958027 | None:intergenic |
| GATGTAGGAGGAGTAGGAGA+AGG | 0.553864 | 2_1:-40957769 | None:intergenic |
| GGTGTTCCTCCGCTGGTAGG+TGG | 0.555413 | 2_1:-40957826 | None:intergenic |
| GTAGCTGAGCCTGGTGATGG+AGG | 0.558470 | 2_1:-40957883 | None:intergenic |
| GTAGGAGTAGTTCCTGATGT+AGG | 0.559933 | 2_1:-40957802 | None:intergenic |
| GATGCAACTCCTCCATCACC+AGG | 0.561384 | 2_1:+40957874 | Msa0207930:CDS |
| TTCAAACAAAACGATGTCCT+AGG | 0.564087 | 2_1:+40956228 | Msa0207930:CDS |
| ACGAGAGTAGTAGCTGAGCC+TGG | 0.564719 | 2_1:-40957892 | None:intergenic |
| CCGGTGGGAGATGACGGCGA+AGG | 0.570502 | 2_1:-40957847 | None:intergenic |
| CCTTCGCCGTCATCTCCCAC+CGG | 0.576478 | 2_1:+40957847 | Msa0207930:CDS |
| GGAGGAGGAGTAGATGTAGG+AGG | 0.578805 | 2_1:-40957781 | None:intergenic |
| GTAGTTCCTGATGTAGGAGG+AGG | 0.581223 | 2_1:-40957796 | None:intergenic |
| ATTATATATAGAGGATTGAG+AGG | 0.584728 | 2_1:-40955927 | None:intergenic |
| AAATTGTTAAAAGAGTGGTT+GGG | 0.588570 | 2_1:-40955832 | None:intergenic |
| GCAGCAGATCATACTGTTGG+AGG | 0.591168 | 2_1:+40956138 | Msa0207930:CDS |
| ATAGGTGAATAGTGTACCAA+AGG | 0.596183 | 2_1:-40958173 | None:intergenic |
| TATTTGATATACATATTGGG+TGG | 0.597641 | 2_1:+40958054 | Msa0207930:three_prime_UTR |
| TACGTTCCCTGTTCTCATTG+CGG | 0.597691 | 2_1:+40957918 | Msa0207930:CDS |
| ATTCAAGGTCATTGTTCCGG+TGG | 0.607111 | 2_1:+40957703 | Msa0207930:CDS |
| GGTTGGAGTGTTCCAAGTGG+CGG | 0.608033 | 2_1:+40956168 | Msa0207930:CDS |
| CTGTTGGAGGCACCACTGGT+TGG | 0.613559 | 2_1:+40956151 | Msa0207930:CDS |
| TGCTTACTTCAGCAACAGTG+TGG | 0.617452 | 2_1:-40957573 | None:intergenic |
| GGAGTAGTTCCTGATGTAGG+AGG | 0.617793 | 2_1:-40957799 | None:intergenic |
| CTTCGCCGTCATCTCCCACC+GGG | 0.621161 | 2_1:+40957848 | Msa0207930:CDS |
| TGATAACCGCAATGAGAACA+GGG | 0.653429 | 2_1:-40957924 | None:intergenic |
| AAACACAAGTACTCAAACAG+GGG | 0.657375 | 2_1:+40956006 | Msa0207930:five_prime_UTR |
| AAAATCAAAGACTAACAATG+AGG | 0.660853 | 2_1:-40958077 | None:intergenic |
| ACTTGGAACACTCCAACCAG+TGG | 0.663713 | 2_1:-40956163 | None:intergenic |
| TAAACACAAGTACTCAAACA+GGG | 0.672991 | 2_1:+40956005 | Msa0207930:five_prime_UTR |
| ACTCCTACTCCACCTACCAG+CGG | 0.712883 | 2_1:+40957817 | Msa0207930:CDS |
| ACTGGTTGGAGTGTTCCAAG+TGG | 0.717431 | 2_1:+40956165 | Msa0207930:CDS |
| CCTACTCCACCTACCAGCGG+AGG | 0.722083 | 2_1:+40957820 | Msa0207930:CDS |
| AGCAATATTAGAAAGCTCAG+AGG | 0.722636 | 2_1:+40956116 | Msa0207930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAATAAATAAAAAAT+AGG | - | chr2_1:40958194-40958213 | None:intergenic | 0.0% |
| !! | ATAAAAAATAAATAAAAAAT+AGG | - | chr2_1:40958194-40958213 | None:intergenic | 0.0% |
| !! | TCTGTTAATAATTAAATTAA+TGG | + | chr2_1:40956566-40956585 | Msa0207930:intron | 10.0% |
| !! | TCAATATTTATTATTCTAAA+TGG | - | chr2_1:40956839-40956858 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTAAGTAGTTTAA+TGG | - | chr2_1:40957014-40957033 | None:intergenic | 10.0% |
| !! | TCTGTTAATAATTAAATTAA+TGG | + | chr2_1:40956566-40956585 | Msa0207930:intron | 10.0% |
| !! | TCAATATTTATTATTCTAAA+TGG | - | chr2_1:40956839-40956858 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTAAGTAGTTTAA+TGG | - | chr2_1:40957014-40957033 | None:intergenic | 10.0% |
| !! | TAATTAAATTGTTAAAAGAG+TGG | - | chr2_1:40955840-40955859 | None:intergenic | 15.0% |
| !!! | TTTTAGTTGATTATATATAG+AGG | - | chr2_1:40955939-40955958 | None:intergenic | 15.0% |
| !!! | TAAATCTTATCTTTTGTATT+TGG | + | chr2_1:40956351-40956370 | Msa0207930:intron | 15.0% |
| !!! | AAATCTTATCTTTTGTATTT+GGG | + | chr2_1:40956352-40956371 | Msa0207930:intron | 15.0% |
| !! | TTTGTCTACTATAAAATATA+TGG | - | chr2_1:40956489-40956508 | None:intergenic | 15.0% |
| !!! | TTTGTTATTCTTTAATAAGT+TGG | - | chr2_1:40956776-40956795 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTGTTTGTTG+AGG | - | chr2_1:40957242-40957261 | None:intergenic | 15.0% |
| !! | TTAGTATTTGATATACATAT+TGG | + | chr2_1:40958050-40958069 | Msa0207930:three_prime_UTR | 15.0% |
| !! | TAGTATTTGATATACATATT+GGG | + | chr2_1:40958051-40958070 | Msa0207930:three_prime_UTR | 15.0% |
| !! | AATTTGTATAACAAAAACAA+GGG | - | chr2_1:40958223-40958242 | None:intergenic | 15.0% |
| !!! | TAATTTGTATAACAAAAACA+AGG | - | chr2_1:40958224-40958243 | None:intergenic | 15.0% |
| !! | TAATTAAATTGTTAAAAGAG+TGG | - | chr2_1:40955840-40955859 | None:intergenic | 15.0% |
| !!! | TTTTAGTTGATTATATATAG+AGG | - | chr2_1:40955939-40955958 | None:intergenic | 15.0% |
| !!! | TAAATCTTATCTTTTGTATT+TGG | + | chr2_1:40956351-40956370 | Msa0207930:intron | 15.0% |
| !!! | AAATCTTATCTTTTGTATTT+GGG | + | chr2_1:40956352-40956371 | Msa0207930:intron | 15.0% |
| !! | TTTGTCTACTATAAAATATA+TGG | - | chr2_1:40956489-40956508 | None:intergenic | 15.0% |
| !!! | TTTGTTATTCTTTAATAAGT+TGG | - | chr2_1:40956776-40956795 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTGTTTGTTG+AGG | - | chr2_1:40957242-40957261 | None:intergenic | 15.0% |
| !! | TTAGTATTTGATATACATAT+TGG | + | chr2_1:40958050-40958069 | Msa0207930:three_prime_UTR | 15.0% |
| !! | TAGTATTTGATATACATATT+GGG | + | chr2_1:40958051-40958070 | Msa0207930:three_prime_UTR | 15.0% |
| !! | AATTTGTATAACAAAAACAA+GGG | - | chr2_1:40958223-40958242 | None:intergenic | 15.0% |
| !!! | TAATTTGTATAACAAAAACA+AGG | - | chr2_1:40958224-40958243 | None:intergenic | 15.0% |
| !!! | GTTTTGTTTGAATGTATTAT+TGG | - | chr2_1:40956220-40956239 | None:intergenic | 20.0% |
| !! | ACTGTTATTCTATAATAAGT+TGG | - | chr2_1:40956746-40956765 | None:intergenic | 20.0% |
| !! | TGAATAAACACTTAATAAAG+AGG | - | chr2_1:40957069-40957088 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTCTTCAAGTTAT+CGG | + | chr2_1:40957195-40957214 | Msa0207930:intron | 20.0% |
| !!! | TCTTTTACATCTTGAAAATA+GGG | - | chr2_1:40957462-40957481 | None:intergenic | 20.0% |
| !! | AAAATGGGACTATTAAAATA+AGG | - | chr2_1:40957511-40957530 | None:intergenic | 20.0% |
| !! | AATTGCAACATTAATCAAAA+TGG | + | chr2_1:40957610-40957629 | Msa0207930:CDS | 20.0% |
| !!! | TATTTTATATGTACCATTCA+AGG | + | chr2_1:40957688-40957707 | Msa0207930:CDS | 20.0% |
| !!! | AACATATTGTTCTAGATTTT+TGG | + | chr2_1:40957949-40957968 | Msa0207930:exon | 20.0% |
| !! | GATTAATAAAAGTTATCCTT+TGG | + | chr2_1:40958157-40958176 | Msa0207930:three_prime_UTR | 20.0% |
| !!! | GTTTTGTTTGAATGTATTAT+TGG | - | chr2_1:40956220-40956239 | None:intergenic | 20.0% |
| !! | ACTGTTATTCTATAATAAGT+TGG | - | chr2_1:40956746-40956765 | None:intergenic | 20.0% |
| !! | TGAATAAACACTTAATAAAG+AGG | - | chr2_1:40957069-40957088 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTCTTCAAGTTAT+CGG | + | chr2_1:40957195-40957214 | Msa0207930:intron | 20.0% |
| !!! | TCTTTTACATCTTGAAAATA+GGG | - | chr2_1:40957462-40957481 | None:intergenic | 20.0% |
| !! | AAAATGGGACTATTAAAATA+AGG | - | chr2_1:40957511-40957530 | None:intergenic | 20.0% |
| !! | AATTGCAACATTAATCAAAA+TGG | + | chr2_1:40957610-40957629 | Msa0207930:CDS | 20.0% |
| !!! | TATTTTATATGTACCATTCA+AGG | + | chr2_1:40957688-40957707 | Msa0207930:CDS | 20.0% |
| !!! | AACATATTGTTCTAGATTTT+TGG | + | chr2_1:40957949-40957968 | Msa0207930:exon | 20.0% |
| !! | GATTAATAAAAGTTATCCTT+TGG | + | chr2_1:40958157-40958176 | Msa0207930:three_prime_UTR | 20.0% |
| ! | ATTATATATAGAGGATTGAG+AGG | - | chr2_1:40955930-40955949 | None:intergenic | 25.0% |
| ! | ATTGCTTGAATTGAATTTGA+AGG | - | chr2_1:40955971-40955990 | None:intergenic | 25.0% |
| !!! | TTAACTGAGACATGTTTTTA+TGG | - | chr2_1:40956059-40956078 | None:intergenic | 25.0% |
| ! | TTGTTTGAATGTATTATTGG+CGG | - | chr2_1:40956217-40956236 | None:intergenic | 25.0% |
| !! | ATTTAGTTCCAAGTTTGTTT+AGG | - | chr2_1:40956336-40956355 | None:intergenic | 25.0% |
| ! | TCAACTATCAAGATCTAATA+TGG | - | chr2_1:40956545-40956564 | None:intergenic | 25.0% |
| ! | ATTAAAGAATAACAAACCCT+AGG | + | chr2_1:40956780-40956799 | Msa0207930:intron | 25.0% |
| ! | TTATAAGTATGAAGAAGTGA+AGG | - | chr2_1:40956978-40956997 | None:intergenic | 25.0% |
| ! | AATAGCAATGAGATATACAT+AGG | + | chr2_1:40957150-40957169 | Msa0207930:intron | 25.0% |
| ! | ATAGCAATGAGATATACATA+GGG | + | chr2_1:40957151-40957170 | Msa0207930:intron | 25.0% |
| ! | CTATTGTTAGAATAAGCAAT+TGG | - | chr2_1:40957298-40957317 | None:intergenic | 25.0% |
| !! | CTCTTTTACATCTTGAAAAT+AGG | - | chr2_1:40957463-40957482 | None:intergenic | 25.0% |
| ! | AATTGAAAACTGAAATTGGA+CGG | - | chr2_1:40957543-40957562 | None:intergenic | 25.0% |
| ! | GCAAAATTGAAAACTGAAAT+TGG | - | chr2_1:40957547-40957566 | None:intergenic | 25.0% |
| !! | ATTTCAGTTTTCAATTTTGC+CGG | + | chr2_1:40957547-40957566 | Msa0207930:intron | 25.0% |
| ! | TATTTGATATACATATTGGG+TGG | + | chr2_1:40958054-40958073 | Msa0207930:three_prime_UTR | 25.0% |
| ! | AAAATCAAAGACTAACAATG+AGG | - | chr2_1:40958080-40958099 | None:intergenic | 25.0% |
| ! | AAAAATGTGTCTCATTAGAA+TGG | + | chr2_1:40958110-40958129 | Msa0207930:three_prime_UTR | 25.0% |
| ! | ATTATATATAGAGGATTGAG+AGG | - | chr2_1:40955930-40955949 | None:intergenic | 25.0% |
| ! | ATTGCTTGAATTGAATTTGA+AGG | - | chr2_1:40955971-40955990 | None:intergenic | 25.0% |
| !!! | TTAACTGAGACATGTTTTTA+TGG | - | chr2_1:40956059-40956078 | None:intergenic | 25.0% |
| ! | TTGTTTGAATGTATTATTGG+CGG | - | chr2_1:40956217-40956236 | None:intergenic | 25.0% |
| !! | ATTTAGTTCCAAGTTTGTTT+AGG | - | chr2_1:40956336-40956355 | None:intergenic | 25.0% |
| ! | TCAACTATCAAGATCTAATA+TGG | - | chr2_1:40956545-40956564 | None:intergenic | 25.0% |
| ! | ATTAAAGAATAACAAACCCT+AGG | + | chr2_1:40956780-40956799 | Msa0207930:intron | 25.0% |
| ! | TTATAAGTATGAAGAAGTGA+AGG | - | chr2_1:40956978-40956997 | None:intergenic | 25.0% |
| ! | AATAGCAATGAGATATACAT+AGG | + | chr2_1:40957150-40957169 | Msa0207930:intron | 25.0% |
| ! | ATAGCAATGAGATATACATA+GGG | + | chr2_1:40957151-40957170 | Msa0207930:intron | 25.0% |
| ! | CTATTGTTAGAATAAGCAAT+TGG | - | chr2_1:40957298-40957317 | None:intergenic | 25.0% |
| !! | CTCTTTTACATCTTGAAAAT+AGG | - | chr2_1:40957463-40957482 | None:intergenic | 25.0% |
| ! | AATTGAAAACTGAAATTGGA+CGG | - | chr2_1:40957543-40957562 | None:intergenic | 25.0% |
| ! | GCAAAATTGAAAACTGAAAT+TGG | - | chr2_1:40957547-40957566 | None:intergenic | 25.0% |
| !! | ATTTCAGTTTTCAATTTTGC+CGG | + | chr2_1:40957547-40957566 | Msa0207930:intron | 25.0% |
| ! | TATTTGATATACATATTGGG+TGG | + | chr2_1:40958054-40958073 | Msa0207930:three_prime_UTR | 25.0% |
| ! | AAAATCAAAGACTAACAATG+AGG | - | chr2_1:40958080-40958099 | None:intergenic | 25.0% |
| ! | AAAAATGTGTCTCATTAGAA+TGG | + | chr2_1:40958110-40958129 | Msa0207930:three_prime_UTR | 25.0% |
| ATAAACACAAGTACTCAAAC+AGG | + | chr2_1:40956004-40956023 | Msa0207930:five_prime_UTR | 30.0% | |
| TAAACACAAGTACTCAAACA+GGG | + | chr2_1:40956005-40956024 | Msa0207930:five_prime_UTR | 30.0% | |
| !! | ATGTTTTTATGGTTGTTGTG+TGG | - | chr2_1:40956048-40956067 | None:intergenic | 30.0% |
| TACATTCTCCTAAACAAACT+TGG | + | chr2_1:40956325-40956344 | Msa0207930:intron | 30.0% | |
| ATCTGTTCAAAAAATCTCTG+TGG | - | chr2_1:40956425-40956444 | None:intergenic | 30.0% | |
| !!! | ACAGAGATTTTTTGAACAGA+TGG | + | chr2_1:40956424-40956443 | Msa0207930:intron | 30.0% |
| ! | TTTTGAACAGATGGTTGTAA+CGG | + | chr2_1:40956433-40956452 | Msa0207930:intron | 30.0% |
| CAGTATCGTGAACTTAAAAT+TGG | - | chr2_1:40956610-40956629 | None:intergenic | 30.0% | |
| !! | TCTGAAATGTTGGTTTATAG+TGG | + | chr2_1:40956878-40956897 | Msa0207930:intron | 30.0% |
| GATTCTCTCCATTTAGAAAA+TGG | - | chr2_1:40956923-40956942 | None:intergenic | 30.0% | |
| AAGTAATCTAACGTGTGATT+TGG | + | chr2_1:40957261-40957280 | Msa0207930:intron | 30.0% | |
| TTTACATCTTGAAAATAGGG+AGG | - | chr2_1:40957459-40957478 | None:intergenic | 30.0% | |
| !! | AAACTTTAACGCTTAGCTTT+TGG | - | chr2_1:40957729-40957748 | None:intergenic | 30.0% |
| TGTATAACAAAAACAAGGGT+CGG | - | chr2_1:40958219-40958238 | None:intergenic | 30.0% | |
| ATAAACACAAGTACTCAAAC+AGG | + | chr2_1:40956004-40956023 | Msa0207930:five_prime_UTR | 30.0% | |
| TAAACACAAGTACTCAAACA+GGG | + | chr2_1:40956005-40956024 | Msa0207930:five_prime_UTR | 30.0% | |
| !! | ATGTTTTTATGGTTGTTGTG+TGG | - | chr2_1:40956048-40956067 | None:intergenic | 30.0% |
| TACATTCTCCTAAACAAACT+TGG | + | chr2_1:40956325-40956344 | Msa0207930:intron | 30.0% | |
| ATCTGTTCAAAAAATCTCTG+TGG | - | chr2_1:40956425-40956444 | None:intergenic | 30.0% | |
| !!! | ACAGAGATTTTTTGAACAGA+TGG | + | chr2_1:40956424-40956443 | Msa0207930:intron | 30.0% |
| ! | TTTTGAACAGATGGTTGTAA+CGG | + | chr2_1:40956433-40956452 | Msa0207930:intron | 30.0% |
| CAGTATCGTGAACTTAAAAT+TGG | - | chr2_1:40956610-40956629 | None:intergenic | 30.0% | |
| !! | TCTGAAATGTTGGTTTATAG+TGG | + | chr2_1:40956878-40956897 | Msa0207930:intron | 30.0% |
| GATTCTCTCCATTTAGAAAA+TGG | - | chr2_1:40956923-40956942 | None:intergenic | 30.0% | |
| AAGTAATCTAACGTGTGATT+TGG | + | chr2_1:40957261-40957280 | Msa0207930:intron | 30.0% | |
| TTTACATCTTGAAAATAGGG+AGG | - | chr2_1:40957459-40957478 | None:intergenic | 30.0% | |
| !! | AAACTTTAACGCTTAGCTTT+TGG | - | chr2_1:40957729-40957748 | None:intergenic | 30.0% |
| TGTATAACAAAAACAAGGGT+CGG | - | chr2_1:40958219-40958238 | None:intergenic | 30.0% | |
| AAACACAAGTACTCAAACAG+GGG | + | chr2_1:40956006-40956025 | Msa0207930:five_prime_UTR | 35.0% | |
| ! | TGTTGTGTGGTTTGTGTTTA+AGG | - | chr2_1:40956035-40956054 | None:intergenic | 35.0% |
| AGCAATATTAGAAAGCTCAG+AGG | + | chr2_1:40956116-40956135 | Msa0207930:CDS | 35.0% | |
| TTCAAACAAAACGATGTCCT+AGG | + | chr2_1:40956228-40956247 | Msa0207930:CDS | 35.0% | |
| AAGAATAACAAACCCTAGGT+TGG | + | chr2_1:40956784-40956803 | Msa0207930:intron | 35.0% | |
| !! | GGTAACAAACTCTGAAATGT+TGG | + | chr2_1:40956868-40956887 | Msa0207930:intron | 35.0% |
| !! | AAATGTTGGTTTATAGTGGC+AGG | + | chr2_1:40956882-40956901 | Msa0207930:intron | 35.0% |
| !! | AATGTTGGTTTATAGTGGCA+GGG | + | chr2_1:40956883-40956902 | Msa0207930:intron | 35.0% |
| ! | AGTCCTCTCCATTTTCTAAA+TGG | + | chr2_1:40956912-40956931 | Msa0207930:intron | 35.0% |
| TCTCCATTTAGAAAATGGAG+AGG | - | chr2_1:40956918-40956937 | None:intergenic | 35.0% | |
| TGGAGAGAATCATAACTCAA+TGG | + | chr2_1:40956932-40956951 | Msa0207930:intron | 35.0% | |
| AGAATCATAACTCAATGGCA+GGG | + | chr2_1:40956937-40956956 | Msa0207930:intron | 35.0% | |
| GTATGAAGAAGTGAAGGATA+TGG | - | chr2_1:40956972-40956991 | None:intergenic | 35.0% | |
| TGTTGAATTAGAGCTGAGTT+TGG | - | chr2_1:40957116-40957135 | None:intergenic | 35.0% | |
| GGACGGCACAATAAAAAAAT+GGG | - | chr2_1:40957526-40957545 | None:intergenic | 35.0% | |
| TGGACGGCACAATAAAAAAA+TGG | - | chr2_1:40957527-40957546 | None:intergenic | 35.0% | |
| AGAGTTACTCTTAACAGAAC+TGG | + | chr2_1:40957658-40957677 | Msa0207930:CDS | 35.0% | |
| ATAGGTGAATAGTGTACCAA+AGG | - | chr2_1:40958176-40958195 | None:intergenic | 35.0% | |
| AAACACAAGTACTCAAACAG+GGG | + | chr2_1:40956006-40956025 | Msa0207930:five_prime_UTR | 35.0% | |
| ! | TGTTGTGTGGTTTGTGTTTA+AGG | - | chr2_1:40956035-40956054 | None:intergenic | 35.0% |
| AGCAATATTAGAAAGCTCAG+AGG | + | chr2_1:40956116-40956135 | Msa0207930:CDS | 35.0% | |
| TTCAAACAAAACGATGTCCT+AGG | + | chr2_1:40956228-40956247 | Msa0207930:CDS | 35.0% | |
| AAGAATAACAAACCCTAGGT+TGG | + | chr2_1:40956784-40956803 | Msa0207930:intron | 35.0% | |
| !! | GGTAACAAACTCTGAAATGT+TGG | + | chr2_1:40956868-40956887 | Msa0207930:intron | 35.0% |
| !! | AAATGTTGGTTTATAGTGGC+AGG | + | chr2_1:40956882-40956901 | Msa0207930:intron | 35.0% |
| !! | AATGTTGGTTTATAGTGGCA+GGG | + | chr2_1:40956883-40956902 | Msa0207930:intron | 35.0% |
| ! | AGTCCTCTCCATTTTCTAAA+TGG | + | chr2_1:40956912-40956931 | Msa0207930:intron | 35.0% |
| TCTCCATTTAGAAAATGGAG+AGG | - | chr2_1:40956918-40956937 | None:intergenic | 35.0% | |
| TGGAGAGAATCATAACTCAA+TGG | + | chr2_1:40956932-40956951 | Msa0207930:intron | 35.0% | |
| AGAATCATAACTCAATGGCA+GGG | + | chr2_1:40956937-40956956 | Msa0207930:intron | 35.0% | |
| GTATGAAGAAGTGAAGGATA+TGG | - | chr2_1:40956972-40956991 | None:intergenic | 35.0% | |
| TGTTGAATTAGAGCTGAGTT+TGG | - | chr2_1:40957116-40957135 | None:intergenic | 35.0% | |
| GGACGGCACAATAAAAAAAT+GGG | - | chr2_1:40957526-40957545 | None:intergenic | 35.0% | |
| TGGACGGCACAATAAAAAAA+TGG | - | chr2_1:40957527-40957546 | None:intergenic | 35.0% | |
| AGAGTTACTCTTAACAGAAC+TGG | + | chr2_1:40957658-40957677 | Msa0207930:CDS | 35.0% | |
| ATAGGTGAATAGTGTACCAA+AGG | - | chr2_1:40958176-40958195 | None:intergenic | 35.0% | |
| ! | CGCTTCGTTTTACTCAGATT+GGG | + | chr2_1:40956191-40956210 | Msa0207930:CDS | 40.0% |
| GCATATACACAAACTCACCT+AGG | - | chr2_1:40956248-40956267 | None:intergenic | 40.0% | |
| GAGAATCATAACTCAATGGC+AGG | + | chr2_1:40956936-40956955 | Msa0207930:intron | 40.0% | |
| GAATCATAACTCAATGGCAG+GGG | + | chr2_1:40956938-40956957 | Msa0207930:intron | 40.0% | |
| ! | TCAGTTTTCAATTTTGCCGG+AGG | + | chr2_1:40957550-40957569 | Msa0207930:intron | 40.0% |
| AATGGCCAAGTCATAACAAC+AGG | + | chr2_1:40957628-40957647 | Msa0207930:CDS | 40.0% | |
| CTGTTAAGAGTAACTCTTGC+TGG | - | chr2_1:40957655-40957674 | None:intergenic | 40.0% | |
| ACCATTCAAGGTCATTGTTC+CGG | + | chr2_1:40957700-40957719 | Msa0207930:CDS | 40.0% | |
| TGATAACCGCAATGAGAACA+GGG | - | chr2_1:40957927-40957946 | None:intergenic | 40.0% | |
| ATGATAACCGCAATGAGAAC+AGG | - | chr2_1:40957928-40957947 | None:intergenic | 40.0% | |
| AGTCAAGCAAGCACATCAAA+CGG | - | chr2_1:40958030-40958049 | None:intergenic | 40.0% | |
| ! | CGCTTCGTTTTACTCAGATT+GGG | + | chr2_1:40956191-40956210 | Msa0207930:CDS | 40.0% |
| GCATATACACAAACTCACCT+AGG | - | chr2_1:40956248-40956267 | None:intergenic | 40.0% | |
| GAGAATCATAACTCAATGGC+AGG | + | chr2_1:40956936-40956955 | Msa0207930:intron | 40.0% | |
| GAATCATAACTCAATGGCAG+GGG | + | chr2_1:40956938-40956957 | Msa0207930:intron | 40.0% | |
| ! | TCAGTTTTCAATTTTGCCGG+AGG | + | chr2_1:40957550-40957569 | Msa0207930:intron | 40.0% |
| AATGGCCAAGTCATAACAAC+AGG | + | chr2_1:40957628-40957647 | Msa0207930:CDS | 40.0% | |
| CTGTTAAGAGTAACTCTTGC+TGG | - | chr2_1:40957655-40957674 | None:intergenic | 40.0% | |
| ACCATTCAAGGTCATTGTTC+CGG | + | chr2_1:40957700-40957719 | Msa0207930:CDS | 40.0% | |
| TGATAACCGCAATGAGAACA+GGG | - | chr2_1:40957927-40957946 | None:intergenic | 40.0% | |
| ATGATAACCGCAATGAGAAC+AGG | - | chr2_1:40957928-40957947 | None:intergenic | 40.0% | |
| AGTCAAGCAAGCACATCAAA+CGG | - | chr2_1:40958030-40958049 | None:intergenic | 40.0% | |
| ! | GCGCTTCGTTTTACTCAGAT+TGG | + | chr2_1:40956190-40956209 | Msa0207930:CDS | 45.0% |
| !! | AGCTCAGTTGGTAACTCAGT+TGG | + | chr2_1:40956808-40956827 | Msa0207930:intron | 45.0% |
| TGCTTACTTCAGCAACAGTG+TGG | - | chr2_1:40957576-40957595 | None:intergenic | 45.0% | |
| CACTGTTGCTGAAGTAAGCA+AGG | + | chr2_1:40957576-40957595 | Msa0207930:CDS | 45.0% | |
| CTGGTCCTGTTGTTATGACT+TGG | - | chr2_1:40957636-40957655 | None:intergenic | 45.0% | |
| ACCGGAACAATGACCTTGAA+TGG | - | chr2_1:40957704-40957723 | None:intergenic | 45.0% | |
| ATTCAAGGTCATTGTTCCGG+TGG | + | chr2_1:40957703-40957722 | Msa0207930:CDS | 45.0% | |
| GTAGGAGTAGTTCCTGATGT+AGG | - | chr2_1:40957805-40957824 | None:intergenic | 45.0% | |
| TACGTTCCCTGTTCTCATTG+CGG | + | chr2_1:40957918-40957937 | Msa0207930:CDS | 45.0% | |
| ! | GCGCTTCGTTTTACTCAGAT+TGG | + | chr2_1:40956190-40956209 | Msa0207930:CDS | 45.0% |
| !! | AGCTCAGTTGGTAACTCAGT+TGG | + | chr2_1:40956808-40956827 | Msa0207930:intron | 45.0% |
| TGCTTACTTCAGCAACAGTG+TGG | - | chr2_1:40957576-40957595 | None:intergenic | 45.0% | |
| CACTGTTGCTGAAGTAAGCA+AGG | + | chr2_1:40957576-40957595 | Msa0207930:CDS | 45.0% | |
| CTGGTCCTGTTGTTATGACT+TGG | - | chr2_1:40957636-40957655 | None:intergenic | 45.0% | |
| ACCGGAACAATGACCTTGAA+TGG | - | chr2_1:40957704-40957723 | None:intergenic | 45.0% | |
| ATTCAAGGTCATTGTTCCGG+TGG | + | chr2_1:40957703-40957722 | Msa0207930:CDS | 45.0% | |
| GTAGGAGTAGTTCCTGATGT+AGG | - | chr2_1:40957805-40957824 | None:intergenic | 45.0% | |
| TACGTTCCCTGTTCTCATTG+CGG | + | chr2_1:40957918-40957937 | Msa0207930:CDS | 45.0% | |
| !! | TAATAAATATTGAATATTTA+AGG | + | chr2_1:40956846-40956865 | Msa0207930:intron | 5.0% |
| !! | AATAAATATTGAATATTTAA+GGG | + | chr2_1:40956847-40956866 | Msa0207930:intron | 5.0% |
| !! | AAAAAGATTAATTAATTTAT+TGG | - | chr2_1:40957178-40957197 | None:intergenic | 5.0% |
| !! | TAATAAATATTGAATATTTA+AGG | + | chr2_1:40956846-40956865 | Msa0207930:intron | 5.0% |
| !! | AATAAATATTGAATATTTAA+GGG | + | chr2_1:40956847-40956866 | Msa0207930:intron | 5.0% |
| !! | AAAAAGATTAATTAATTTAT+TGG | - | chr2_1:40957178-40957197 | None:intergenic | 5.0% |
| GAGGCAGCAGATCATACTGT+TGG | + | chr2_1:40956135-40956154 | Msa0207930:CDS | 50.0% | |
| GCAGCAGATCATACTGTTGG+AGG | + | chr2_1:40956138-40956157 | Msa0207930:CDS | 50.0% | |
| ACTTGGAACACTCCAACCAG+TGG | - | chr2_1:40956166-40956185 | None:intergenic | 50.0% | |
| ! | ACTGGTTGGAGTGTTCCAAG+TGG | + | chr2_1:40956165-40956184 | Msa0207930:CDS | 50.0% |
| CCAACTGAGCTACCAACCTA+GGG | - | chr2_1:40956799-40956818 | None:intergenic | 50.0% | |
| ACCAACTGAGCTACCAACCT+AGG | - | chr2_1:40956800-40956819 | None:intergenic | 50.0% | |
| !! | AACGCTTAGCTTTTGGCCAC+CGG | - | chr2_1:40957722-40957741 | None:intergenic | 50.0% |
| GATGTAGGAGGAGTAGGAGA+AGG | - | chr2_1:40957772-40957791 | None:intergenic | 50.0% | |
| GGAGTAGATGTAGGAGGAGT+AGG | - | chr2_1:40957778-40957797 | None:intergenic | 50.0% | |
| GTAGGAGGAGGAGTAGATGT+AGG | - | chr2_1:40957787-40957806 | None:intergenic | 50.0% | |
| TCTACTCCTCCTCCTACATC+AGG | + | chr2_1:40957790-40957809 | Msa0207930:CDS | 50.0% | |
| GTAGTTCCTGATGTAGGAGG+AGG | - | chr2_1:40957799-40957818 | None:intergenic | 50.0% | |
| GGAGTAGTTCCTGATGTAGG+AGG | - | chr2_1:40957802-40957821 | None:intergenic | 50.0% | |
| !! | TGGTGATGGAGGAGTTGCAT+CGG | - | chr2_1:40957875-40957894 | None:intergenic | 50.0% |
| GAGGCAGCAGATCATACTGT+TGG | + | chr2_1:40956135-40956154 | Msa0207930:CDS | 50.0% | |
| GCAGCAGATCATACTGTTGG+AGG | + | chr2_1:40956138-40956157 | Msa0207930:CDS | 50.0% | |
| ACTTGGAACACTCCAACCAG+TGG | - | chr2_1:40956166-40956185 | None:intergenic | 50.0% | |
| ! | ACTGGTTGGAGTGTTCCAAG+TGG | + | chr2_1:40956165-40956184 | Msa0207930:CDS | 50.0% |
| CCAACTGAGCTACCAACCTA+GGG | - | chr2_1:40956799-40956818 | None:intergenic | 50.0% | |
| ACCAACTGAGCTACCAACCT+AGG | - | chr2_1:40956800-40956819 | None:intergenic | 50.0% | |
| !! | AACGCTTAGCTTTTGGCCAC+CGG | - | chr2_1:40957722-40957741 | None:intergenic | 50.0% |
| GATGTAGGAGGAGTAGGAGA+AGG | - | chr2_1:40957772-40957791 | None:intergenic | 50.0% | |
| GGAGTAGATGTAGGAGGAGT+AGG | - | chr2_1:40957778-40957797 | None:intergenic | 50.0% | |
| GTAGGAGGAGGAGTAGATGT+AGG | - | chr2_1:40957787-40957806 | None:intergenic | 50.0% | |
| TCTACTCCTCCTCCTACATC+AGG | + | chr2_1:40957790-40957809 | Msa0207930:CDS | 50.0% | |
| GTAGTTCCTGATGTAGGAGG+AGG | - | chr2_1:40957799-40957818 | None:intergenic | 50.0% | |
| GGAGTAGTTCCTGATGTAGG+AGG | - | chr2_1:40957802-40957821 | None:intergenic | 50.0% | |
| !! | TGGTGATGGAGGAGTTGCAT+CGG | - | chr2_1:40957875-40957894 | None:intergenic | 50.0% |
| !! | CATACTGTTGGAGGCACCAC+TGG | + | chr2_1:40956147-40956166 | Msa0207930:CDS | 55.0% |
| ! | GGTTGGAGTGTTCCAAGTGG+CGG | + | chr2_1:40956168-40956187 | Msa0207930:CDS | 55.0% |
| !! | TAAAACGAAGCGCCGCCACT+TGG | - | chr2_1:40956183-40956202 | None:intergenic | 55.0% |
| !! | CCCTAGGTTGGTAGCTCAGT+TGG | + | chr2_1:40956796-40956815 | Msa0207930:intron | 55.0% |
| TTCAGCAACAGTGTGGCCTC+CGG | - | chr2_1:40957569-40957588 | None:intergenic | 55.0% | |
| AGGAGAAGGAGGAGAAGTCG+AGG | - | chr2_1:40957758-40957777 | None:intergenic | 55.0% | |
| GTAGGAGGAGTAGGAGAAGG+AGG | - | chr2_1:40957769-40957788 | None:intergenic | 55.0% | |
| GGAGGAGGAGTAGATGTAGG+AGG | - | chr2_1:40957784-40957803 | None:intergenic | 55.0% | |
| ACTCCTACTCCACCTACCAG+CGG | + | chr2_1:40957817-40957836 | Msa0207930:CDS | 55.0% | |
| !! | GGTGATGGAGGAGTTGCATC+GGG | - | chr2_1:40957874-40957893 | None:intergenic | 55.0% |
| GATGCAACTCCTCCATCACC+AGG | + | chr2_1:40957874-40957893 | Msa0207930:CDS | 55.0% | |
| GTAGTAGCTGAGCCTGGTGA+TGG | - | chr2_1:40957889-40957908 | None:intergenic | 55.0% | |
| ACGAGAGTAGTAGCTGAGCC+TGG | - | chr2_1:40957895-40957914 | None:intergenic | 55.0% | |
| !! | CATACTGTTGGAGGCACCAC+TGG | + | chr2_1:40956147-40956166 | Msa0207930:CDS | 55.0% |
| ! | GGTTGGAGTGTTCCAAGTGG+CGG | + | chr2_1:40956168-40956187 | Msa0207930:CDS | 55.0% |
| !! | TAAAACGAAGCGCCGCCACT+TGG | - | chr2_1:40956183-40956202 | None:intergenic | 55.0% |
| !! | CCCTAGGTTGGTAGCTCAGT+TGG | + | chr2_1:40956796-40956815 | Msa0207930:intron | 55.0% |
| TTCAGCAACAGTGTGGCCTC+CGG | - | chr2_1:40957569-40957588 | None:intergenic | 55.0% | |
| AGGAGAAGGAGGAGAAGTCG+AGG | - | chr2_1:40957758-40957777 | None:intergenic | 55.0% | |
| GTAGGAGGAGTAGGAGAAGG+AGG | - | chr2_1:40957769-40957788 | None:intergenic | 55.0% | |
| GGAGGAGGAGTAGATGTAGG+AGG | - | chr2_1:40957784-40957803 | None:intergenic | 55.0% | |
| ACTCCTACTCCACCTACCAG+CGG | + | chr2_1:40957817-40957836 | Msa0207930:CDS | 55.0% | |
| !! | GGTGATGGAGGAGTTGCATC+GGG | - | chr2_1:40957874-40957893 | None:intergenic | 55.0% |
| GATGCAACTCCTCCATCACC+AGG | + | chr2_1:40957874-40957893 | Msa0207930:CDS | 55.0% | |
| GTAGTAGCTGAGCCTGGTGA+TGG | - | chr2_1:40957889-40957908 | None:intergenic | 55.0% | |
| ACGAGAGTAGTAGCTGAGCC+TGG | - | chr2_1:40957895-40957914 | None:intergenic | 55.0% | |
| !! | CTGTTGGAGGCACCACTGGT+TGG | + | chr2_1:40956151-40956170 | Msa0207930:CDS | 60.0% |
| !! | GAAGGTGTTCCTCCGCTGGT+AGG | - | chr2_1:40957832-40957851 | None:intergenic | 60.0% |
| !! | GTAGCTGAGCCTGGTGATGG+AGG | - | chr2_1:40957886-40957905 | None:intergenic | 60.0% |
| !! | CTGTTGGAGGCACCACTGGT+TGG | + | chr2_1:40956151-40956170 | Msa0207930:CDS | 60.0% |
| !! | GAAGGTGTTCCTCCGCTGGT+AGG | - | chr2_1:40957832-40957851 | None:intergenic | 60.0% |
| !! | GTAGCTGAGCCTGGTGATGG+AGG | - | chr2_1:40957886-40957905 | None:intergenic | 60.0% |
| CCTCCGCTGGTAGGTGGAGT+AGG | - | chr2_1:40957823-40957842 | None:intergenic | 65.0% | |
| CCTACTCCACCTACCAGCGG+AGG | + | chr2_1:40957820-40957839 | Msa0207930:CDS | 65.0% | |
| GGTGTTCCTCCGCTGGTAGG+TGG | - | chr2_1:40957829-40957848 | None:intergenic | 65.0% | |
| CCTTCGCCGTCATCTCCCAC+CGG | + | chr2_1:40957847-40957866 | Msa0207930:CDS | 65.0% | |
| CTTCGCCGTCATCTCCCACC+GGG | + | chr2_1:40957848-40957867 | Msa0207930:CDS | 65.0% | |
| TGGAGGAGTTGCATCGGGCC+CGG | - | chr2_1:40957869-40957888 | None:intergenic | 65.0% | |
| CCTCCGCTGGTAGGTGGAGT+AGG | - | chr2_1:40957823-40957842 | None:intergenic | 65.0% | |
| CCTACTCCACCTACCAGCGG+AGG | + | chr2_1:40957820-40957839 | Msa0207930:CDS | 65.0% | |
| GGTGTTCCTCCGCTGGTAGG+TGG | - | chr2_1:40957829-40957848 | None:intergenic | 65.0% | |
| CCTTCGCCGTCATCTCCCAC+CGG | + | chr2_1:40957847-40957866 | Msa0207930:CDS | 65.0% | |
| CTTCGCCGTCATCTCCCACC+GGG | + | chr2_1:40957848-40957867 | Msa0207930:CDS | 65.0% | |
| TGGAGGAGTTGCATCGGGCC+CGG | - | chr2_1:40957869-40957888 | None:intergenic | 65.0% | |
| !! | CGGCGAAGGTGTTCCTCCGC+TGG | - | chr2_1:40957836-40957855 | None:intergenic | 70.0% |
| ! | CCGGTGGGAGATGACGGCGA+AGG | - | chr2_1:40957850-40957869 | None:intergenic | 70.0% |
| TCGGGCCCGGTGGGAGATGA+CGG | - | chr2_1:40957856-40957875 | None:intergenic | 70.0% | |
| GGAGTTGCATCGGGCCCGGT+GGG | - | chr2_1:40957865-40957884 | None:intergenic | 70.0% | |
| AGGAGTTGCATCGGGCCCGG+TGG | - | chr2_1:40957866-40957885 | None:intergenic | 70.0% | |
| !! | CGGCGAAGGTGTTCCTCCGC+TGG | - | chr2_1:40957836-40957855 | None:intergenic | 70.0% |
| ! | CCGGTGGGAGATGACGGCGA+AGG | - | chr2_1:40957850-40957869 | None:intergenic | 70.0% |
| TCGGGCCCGGTGGGAGATGA+CGG | - | chr2_1:40957856-40957875 | None:intergenic | 70.0% | |
| GGAGTTGCATCGGGCCCGGT+GGG | - | chr2_1:40957865-40957884 | None:intergenic | 70.0% | |
| AGGAGTTGCATCGGGCCCGG+TGG | - | chr2_1:40957866-40957885 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 40955834 | 40958254 | 40955834 | ID=Msa0207930;Name=Msa0207930 |
| chr2_1 | mRNA | 40955834 | 40958254 | 40955834 | ID=Msa0207930-mRNA-1;Parent=Msa0207930;Name=Msa0207930-mRNA-1;_AED=0.02;_eAED=0.02;_QI=232|1|1|1|1|1|2|291|197 |
| chr2_1 | exon | 40955834 | 40956249 | 40955834 | ID=Msa0207930-mRNA-1:exon:12606;Parent=Msa0207930-mRNA-1 |
| chr2_1 | exon | 40957554 | 40958254 | 40957554 | ID=Msa0207930-mRNA-1:exon:12607;Parent=Msa0207930-mRNA-1 |
| chr2_1 | five_prime_UTR | 40955834 | 40956065 | 40955834 | ID=Msa0207930-mRNA-1:five_prime_utr;Parent=Msa0207930-mRNA-1 |
| chr2_1 | CDS | 40956066 | 40956249 | 40956066 | ID=Msa0207930-mRNA-1:cds;Parent=Msa0207930-mRNA-1 |
| chr2_1 | CDS | 40957554 | 40957963 | 40957554 | ID=Msa0207930-mRNA-1:cds;Parent=Msa0207930-mRNA-1 |
| chr2_1 | three_prime_UTR | 40957964 | 40958254 | 40957964 | ID=Msa0207930-mRNA-1:three_prime_utr;Parent=Msa0207930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
