AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1082080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1082080 MtrunA17_Chr7g0269511 97.168 565 16 0 1 565 1 565 0.0 1137
Msa1082080 MtrunA17_Chr7g0269521 67.164 536 168 4 34 565 32 563 0.0 736
Msa1082080 MtrunA17_Chr1g0175661 64.865 555 178 5 14 565 19 559 0.0 736
Msa1082080 MtrunA17_Chr1g0195301 66.792 533 172 3 36 565 26 556 0.0 728
Msa1082080 MtrunA17_Chr1g0195321 66.792 533 172 3 36 565 26 556 0.0 728
Msa1082080 MtrunA17_Chr1g0195331 64.085 568 189 4 1 565 1 556 0.0 726
Msa1082080 MtrunA17_Chr1g0195351 63.732 568 189 5 1 565 1 554 0.0 719
Msa1082080 MtrunA17_Chr7g0269531 62.547 534 194 5 34 564 35 565 0.0 682
Msa1082080 MtrunA17_Chr1g0192331 52.751 527 217 6 37 560 27 524 0.0 538
Msa1082080 MtrunA17_Chr3g0080381 50.909 550 238 11 40 566 90 630 5.23e-180 521
Msa1082080 MtrunA17_Chr8g0354911 50.462 541 246 8 41 564 77 612 2.94e-178 516
Msa1082080 MtrunA17_Chr1g0195311 77.154 267 61 0 299 565 49 315 8.37e-155 446
Msa1082080 MtrunA17_Chr7g0269541 48.780 492 224 8 72 560 86 552 2.62e-148 438
Msa1082080 MtrunA17_Chr4g0011771 45.489 532 231 15 42 564 32 513 1.03e-133 399
Msa1082080 MtrunA17_Chr8g0391311 43.879 531 267 10 41 564 35 541 2.65e-132 396
Msa1082080 MtrunA17_Chr4g0011791 45.369 529 231 14 42 564 33 509 7.66e-132 394
Msa1082080 MtrunA17_Chr8g0391291 43.585 530 270 10 41 564 33 539 8.17e-132 395
Msa1082080 MtrunA17_Chr1g0147051 45.697 488 231 9 93 564 138 607 1.47e-131 397
Msa1082080 MtrunA17_Chr2g0302021 46.482 469 211 10 101 564 92 525 6.17e-130 390
Msa1082080 MtrunA17_Chr4g0069881 40.780 564 278 12 14 564 15 535 8.91e-130 390
Msa1082080 MtrunA17_Chr8g0345281 45.549 483 248 7 84 564 120 589 9.42e-127 384
Msa1082080 MtrunA17_Chr3g0126771 40.917 589 285 16 9 564 39 597 3.84e-125 380
Msa1082080 MtrunA17_Chr4g0069841 44.968 467 218 8 101 564 86 516 7.06e-125 377
Msa1082080 MtrunA17_Chr7g0272141 44.280 472 224 10 101 566 106 544 1.01e-124 377
Msa1082080 MtrunA17_Chr8g0354901 45.376 465 225 8 100 564 146 581 1.18e-124 378
Msa1082080 MtrunA17_Chr7g0233831 45.182 467 220 10 101 564 122 555 1.01e-123 375
Msa1082080 MtrunA17_Chr4g0069861 43.579 475 217 8 101 564 83 517 8.74e-123 371
Msa1082080 MtrunA17_Chr3g0080391 43.871 465 232 8 100 564 139 574 2.33e-122 372
Msa1082080 MtrunA17_Chr4g0011751 42.827 467 226 7 93 558 57 483 4.15e-121 366
Msa1082080 MtrunA17_Chr7g0233771 44.968 467 221 10 101 564 121 554 5.04e-121 368
Msa1082080 MtrunA17_Chr7g0233801 42.767 477 238 9 90 564 110 553 3.14e-116 355
Msa1082080 MtrunA17_Chr4g0018371 38.910 532 284 11 42 564 40 539 1.14e-114 351
Msa1082080 MtrunA17_Chr3g0090091 38.795 531 279 10 42 564 36 528 2.14e-113 347
Msa1082080 MtrunA17_Chr3g0079361 39.736 531 273 12 42 564 36 527 1.53e-112 345
Msa1082080 MtrunA17_Chr3g0079341 39.736 531 273 12 42 564 36 527 1.48e-111 343
Msa1082080 MtrunA17_Chr3g0079351 38.491 530 281 11 42 564 36 527 3.46e-111 342
Msa1082080 MtrunA17_Chr4g0069891 40.830 458 255 5 101 558 146 587 7.25e-110 340
Msa1082080 MtrunA17_Chr2g0302001 51.525 295 140 1 270 564 146 437 2.78e-107 328
Msa1082080 MtrunA17_Chr8g0345211 38.505 535 288 15 40 564 79 582 1.93e-102 321
Msa1082080 MtrunA17_Chr7g0270691 35.043 585 325 17 1 565 1 550 1.80e-100 315
Msa1082080 MtrunA17_Chr1g0194091 36.096 543 301 8 42 560 45 565 4.73e-100 314
Msa1082080 MtrunA17_Chr1g0194081 35.955 534 305 9 40 560 50 559 3.11e-98 309
Msa1082080 MtrunA17_Chr1g0192321 38.046 481 264 11 98 561 117 580 9.87e-98 309
Msa1082080 MtrunA17_Chr1g0192311 38.065 465 261 8 101 560 124 566 6.89e-95 301
Msa1082080 MtrunA17_Chr1g0192281 38.065 465 261 8 101 560 124 566 6.89e-95 301
Msa1082080 MtrunA17_Chr3g0129921 34.828 580 300 18 11 559 27 559 2.39e-93 296
Msa1082080 MtrunA17_Chr7g0272151 33.274 559 293 9 42 561 63 580 2.56e-93 297
Msa1082080 MtrunA17_Chr2g0301931 51.408 284 134 2 283 566 15 294 3.36e-93 287
Msa1082080 MtrunA17_Chr8g0384121 34.687 591 297 18 8 559 19 559 8.76e-93 295
Msa1082080 MtrunA17_Chr4g0000121 37.149 463 268 7 101 560 111 553 3.46e-91 291
Msa1082080 MtrunA17_Chr1g0192301 37.365 463 267 7 101 560 129 571 6.94e-91 291
Msa1082080 MtrunA17_Chr4g0067611 35.881 471 270 8 100 560 120 568 7.12e-88 283
Msa1082080 MtrunA17_Chr7g0234711 55.844 231 100 2 336 564 39 269 8.40e-87 270
Msa1082080 MtrunA17_Chr4g0067601 35.307 473 272 7 100 561 120 569 1.93e-86 279
Msa1082080 MtrunA17_Chr7g0270651 33.087 541 324 9 42 564 46 566 9.83e-85 274
Msa1082080 MtrunA17_Chr2g0295531 33.568 569 323 15 5 561 18 543 7.21e-84 273
Msa1082080 MtrunA17_Chr7g0270661 35.510 490 265 8 101 564 108 572 2.79e-83 271
Msa1082080 MtrunA17_Chr7g0270671 35.510 490 265 8 101 564 108 572 2.79e-83 271
Msa1082080 MtrunA17_Chr2g0295551 32.746 568 335 13 11 561 24 561 4.57e-81 265
Msa1082080 MtrunA17_Chr7g0270631 34.025 482 285 6 98 565 93 555 9.23e-79 269
Msa1082080 MtrunA17_Chr7g0270631 32.041 490 294 8 98 564 641 1114 2.76e-68 239
Msa1082080 MtrunA17_Chr8g0380581 40.419 334 187 5 230 561 50 373 1.48e-78 252
Msa1082080 MtrunA17_Chr5g0437831 41.424 309 175 4 254 560 75 379 2.81e-75 244
Msa1082080 MtrunA17_Chr7g0271381 31.016 561 333 15 12 560 34 552 4.18e-72 241
Msa1082080 MtrunA17_Chr7g0268241 40.635 315 171 6 252 564 50 350 3.86e-71 232
Msa1082080 MtrunA17_Chr2g0334111 40.317 315 170 7 252 564 25 323 5.01e-71 231
Msa1082080 MtrunA17_Chr2g0295541 30.948 559 321 11 42 561 60 592 1.27e-67 229
Msa1082080 MtrunA17_Chr6g0487101 38.689 305 159 7 260 553 93 380 3.80e-56 193
Msa1082080 MtrunA17_Chr8g0389771 37.785 307 161 7 260 553 88 377 1.08e-54 189
Msa1082080 MtrunA17_Chr6g0453551 34.277 318 180 7 251 555 5 306 1.92e-52 181
Msa1082080 MtrunA17_Chr1g0194311 34.615 312 177 8 252 553 74 368 1.89e-49 175
Msa1082080 MtrunA17_Chr8g0391261 54.745 137 61 1 429 564 30 166 4.69e-48 164
Msa1082080 MtrunA17_Chr6g0466961 36.395 294 157 9 241 527 29 299 2.64e-47 168
Msa1082080 MtrunA17_Chr7g0217941 35.640 289 158 8 251 527 5 277 3.54e-47 167
Msa1082080 MtrunA17_Chr7g0258341 33.333 312 184 7 252 553 90 387 1.89e-46 167
Msa1082080 MtrunA17_Chr4g0070051 31.098 328 193 10 236 553 39 343 2.70e-44 160
Msa1082080 MtrunA17_Chr6g0466951 32.423 293 170 8 241 527 58 328 1.74e-42 155
Msa1082080 MtrunA17_Chr5g0446301 33.117 308 177 7 258 553 67 357 5.97e-41 151
Msa1082080 MtrunA17_Chr1g0161731 34.035 285 162 7 252 527 48 315 1.50e-38 144
Msa1082080 MtrunA17_Chr7g0265201 31.169 308 183 7 253 553 100 385 4.26e-38 144
Msa1082080 MtrunA17_Chr5g0399221 28.931 318 197 7 251 556 62 362 4.45e-38 144
Msa1082080 MtrunA17_Chr2g0294321 27.576 330 210 7 234 554 38 347 1.11e-36 139
Msa1082080 MtrunA17_Chr4g0037751 31.068 309 190 8 251 553 70 361 3.27e-35 136
Msa1082080 MtrunA17_Chr5g0440871 31.922 307 185 7 248 553 35 318 1.10e-34 133
Msa1082080 MtrunA17_Chr2g0295851 26.911 327 207 9 234 554 37 337 2.13e-33 130
Msa1082080 MtrunA17_Chr5g0420831 32.979 282 168 8 251 526 70 336 4.86e-33 130
Msa1082080 MtrunA17_Chr2g0299431 38.767 227 119 6 234 454 40 252 1.44e-32 126
Msa1082080 MtrunA17_Chr8g0351871 29.618 314 187 9 251 553 32 322 1.75e-30 122
Msa1082080 MtrunA17_Chr6g0459781 37.430 179 91 5 251 416 12 182 1.60e-28 113
Msa1082080 MtrunA17_Chr5g0437821 37.879 132 81 1 368 498 4 135 2.30e-26 104
Msa1082080 MtrunA17_Chr4g0025841 29.644 253 158 4 247 499 32 264 4.20e-24 102
Msa1082080 MtrunA17_Chr2g0314691 31.100 209 130 5 346 553 6 201 2.75e-23 98.2
Msa1082080 MtrunA17_Chr7g0265161 33.149 181 88 4 320 495 5 157 1.57e-22 96.7
Msa1082080 MtrunA17_Chr5g0440901 35.294 153 89 3 347 499 1 143 1.77e-22 94.0
Msa1082080 MtrunA17_Chr8g0391281 30.795 302 179 9 41 336 33 310 4.16e-20 91.7
Msa1082080 MtrunA17_Chr5g0440891 33.929 168 99 4 248 414 44 200 1.03e-17 82.0
Msa1082080 MtrunA17_Chr6g0459791 38.710 124 64 3 431 553 4 116 6.99e-17 77.0
Msa1082080 MtrunA17_Chr6g0460141 34.286 140 84 3 283 414 5 144 1.08e-14 71.6
Msa1082080 MtrunA17_Chr7g0234731 26.333 300 174 11 42 334 55 314 1.79e-13 71.6
Msa1082080 MtrunA17_Chr4g0073911 28.902 173 110 5 282 446 35 202 1.36e-12 68.2
Msa1082080 MtrunA17_Chr5g0440881 28.169 142 91 2 412 553 9 139 1.80e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1082080 AT4G02330.1 62.369 574 196 9 8 565 3 572 0.0 716
Msa1082080 AT1G02810.1 63.139 548 179 6 42 566 32 579 0.0 701
Msa1082080 AT2G47550.1 62.734 534 186 7 37 565 34 559 0.0 655
Msa1082080 AT5G04970.1 48.529 544 254 8 41 566 87 622 1.98e-179 520
Msa1082080 AT3G10720.2 48.708 542 256 7 41 566 82 617 1.82e-177 515
Msa1082080 AT2G26440.1 42.830 530 273 9 42 564 41 547 3.95e-132 397
Msa1082080 AT2G45220.1 43.438 541 229 14 40 564 32 511 5.87e-129 387
Msa1082080 AT1G11580.1 40.246 569 300 10 5 564 20 557 8.14e-128 386
Msa1082080 AT1G11580.2 40.246 569 300 10 5 564 41 578 2.74e-127 385
Msa1082080 AT3G43270.1 45.532 470 230 9 101 566 80 527 3.86e-126 380
Msa1082080 AT1G23200.1 41.852 540 276 11 41 564 37 554 7.28e-125 378
Msa1082080 AT3G49220.1 44.350 469 237 7 98 564 150 596 7.49e-124 377
Msa1082080 AT3G10720.1 63.077 260 96 0 306 565 1 260 9.04e-124 365
Msa1082080 AT3G49220.3 44.350 469 237 7 98 564 195 641 1.65e-123 377
Msa1082080 AT3G60730.1 43.220 472 234 9 101 561 68 516 5.95e-122 369
Msa1082080 AT4G33220.1 45.474 475 229 10 101 564 68 523 7.88e-122 369
Msa1082080 AT1G53830.1 41.899 537 287 8 40 564 64 587 1.14e-120 369
Msa1082080 AT3G05620.1 41.566 498 232 9 88 566 86 543 2.68e-120 366
Msa1082080 AT5G51490.1 40.782 537 266 13 42 564 38 536 3.49e-120 365
Msa1082080 AT5G53370.1 44.492 472 233 10 99 564 137 585 1.33e-119 365
Msa1082080 AT5G53370.2 44.492 472 233 10 99 564 173 621 3.39e-119 366
Msa1082080 AT1G53840.1 40.036 552 286 13 24 558 58 581 1.15e-118 363
Msa1082080 AT3G14310.1 40.441 544 293 8 40 564 61 592 1.51e-117 360
Msa1082080 AT4G33220.2 53.313 332 145 3 234 564 80 402 4.82e-117 353
Msa1082080 AT4G02300.1 42.796 465 234 8 101 561 93 529 1.68e-116 356
Msa1082080 AT4G02320.1 42.742 496 243 12 77 564 56 518 9.30e-116 353
Msa1082080 AT2G43050.1 41.153 503 242 10 69 566 65 518 2.02e-115 353
Msa1082080 AT3G05610.1 40.299 469 252 6 101 565 122 566 7.84e-115 356
Msa1082080 AT5G04960.1 43.897 426 215 8 136 560 158 560 1.39e-114 352
Msa1082080 AT5G51500.1 39.744 546 259 14 42 564 42 540 6.50e-114 349
Msa1082080 AT2G26450.1 40.938 469 227 10 101 557 174 604 6.49e-113 349
Msa1082080 AT3G59010.1 45.497 433 200 10 136 565 130 529 3.45e-112 345
Msa1082080 AT4G00190.1 40.152 528 250 13 42 564 8 474 1.38e-111 341
Msa1082080 AT5G27870.1 40.086 464 254 6 98 560 118 558 2.93e-110 346
Msa1082080 AT3G10710.1 38.764 534 282 13 36 564 68 561 2.06e-108 336
Msa1082080 AT4G33230.1 40.043 467 243 10 101 557 160 599 1.30e-107 335
Msa1082080 AT3G14300.1 42.060 466 229 10 101 555 525 960 4.52e-101 327
Msa1082080 AT5G20860.2 36.802 519 266 13 64 564 64 538 2.96e-100 314
Msa1082080 AT4G03930.1 40.930 430 222 7 136 564 126 524 2.85e-98 308
Msa1082080 AT3G47400.1 40.000 470 247 8 101 564 154 594 4.59e-98 310
Msa1082080 AT3G06830.1 41.163 430 235 8 136 561 150 565 1.60e-97 308
Msa1082080 AT5G49180.1 39.186 467 256 8 101 560 121 566 2.68e-97 307
Msa1082080 AT1G11590.1 34.964 552 299 12 33 564 13 524 3.55e-96 303
Msa1082080 AT3G27980.1 48.089 314 157 3 252 564 189 497 4.09e-95 299
Msa1082080 AT4G15980.1 45.161 310 166 2 252 560 392 698 2.37e-83 274
Msa1082080 AT4G15980.2 45.161 310 166 2 252 560 402 708 3.86e-83 274
Msa1082080 AT5G09760.2 45.223 314 159 7 248 552 263 572 2.78e-82 268
Msa1082080 AT5G09760.1 45.223 314 159 7 248 552 237 546 2.93e-82 268
Msa1082080 AT5G64640.1 44.062 320 159 7 252 557 289 602 4.95e-81 266
Msa1082080 AT1G11370.1 50.000 244 119 1 252 495 46 286 8.39e-81 255
Msa1082080 AT5G20860.1 33.597 506 246 12 64 551 64 497 5.20e-80 260
Msa1082080 AT2G47030.1 30.151 597 363 12 8 564 6 588 2.35e-72 242
Msa1082080 AT2G47040.1 30.782 601 361 16 8 564 6 595 7.76e-72 241
Msa1082080 AT3G62170.1 40.909 308 175 4 254 558 279 582 1.47e-66 227
Msa1082080 AT5G19730.1 36.721 305 165 6 260 553 94 381 1.24e-52 184
Msa1082080 AT2G36700.1 33.766 308 184 5 251 553 41 333 7.42e-50 175
Msa1082080 AT2G21610.1 33.227 313 189 6 251 563 50 342 1.46e-49 175
Msa1082080 AT2G21610.2 33.227 313 189 6 251 563 55 347 2.30e-49 175
Msa1082080 AT1G05310.1 33.333 342 193 7 230 553 64 388 3.01e-49 176
Msa1082080 AT2G36710.1 34.286 315 186 5 251 558 90 390 3.90e-49 176
Msa1082080 AT3G29090.1 36.332 289 156 8 251 527 6 278 6.96e-48 169
Msa1082080 AT5G07430.1 32.515 326 199 6 232 553 47 355 1.66e-46 167
Msa1082080 AT3G17060.1 30.312 320 194 7 244 554 38 337 1.31e-43 159
Msa1082080 AT5G18990.1 34.483 290 157 7 252 527 29 299 6.91e-41 151
Msa1082080 AT3G24130.1 33.220 295 164 7 247 527 29 304 1.16e-39 148
Msa1082080 AT2G19150.1 31.529 314 195 7 252 560 41 339 1.18e-39 148
Msa1082080 AT5G47500.1 30.189 318 187 8 251 553 60 357 1.53e-39 148
Msa1082080 AT5G55590.1 30.818 318 191 7 248 553 78 378 2.67e-37 142
Msa1082080 AT5G07420.1 29.773 309 196 6 249 553 64 355 5.06e-37 141
Msa1082080 AT1G44980.1 45.509 167 88 1 252 418 78 241 1.64e-36 136
Msa1082080 AT5G61680.1 30.421 309 191 8 251 553 68 358 6.69e-36 138
Msa1082080 AT1G69940.1 28.354 328 211 9 231 553 47 355 7.10e-36 138
Msa1082080 AT5G07410.1 28.354 328 211 9 231 553 47 355 3.63e-35 136
Msa1082080 AT2G47280.1 30.063 316 188 8 252 555 35 329 1.28e-34 134
Msa1082080 AT5G55590.2 31.939 263 152 6 248 498 78 325 2.20e-34 133
Msa1082080 AT2G19150.2 32.941 255 153 6 252 501 41 282 2.01e-33 129
Msa1082080 AT5G26810.1 31.928 332 187 11 240 553 23 333 2.85e-33 130
Msa1082080 AT3G49220.2 30.962 239 142 6 98 335 195 411 2.90e-20 94.0

Find 119 sgRNAs with CRISPR-Local

Find 165 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTTACATGCAAACATTTA+TGG 0.129976 7_2:-82047347 Msa1082080:CDS
TGGTGCTGTTTCAACATATT+TGG 0.148909 7_2:-82047398 Msa1082080:CDS
TCGCTAGAAACAGATTTATT+TGG 0.177140 7_2:+82048690 None:intergenic
TACAGAGAATGTGACATTTA+TGG 0.181984 7_2:-82047607 Msa1082080:CDS
GTGGATAGAGGTTACAATTT+TGG 0.190584 7_2:+82047545 None:intergenic
AGACATTAATTAATTAATTA+AGG 0.202828 7_2:+82047096 None:intergenic
TATGCTGAGTTTAATAATAC+TGG 0.243616 7_2:-82047259 Msa1082080:CDS
GACAAACCAACAAACTTGTT+TGG 0.275277 7_2:-82049069 Msa1082080:CDS
GTTGGAGATATTTGTTGATT+AGG 0.292074 7_2:+82049261 None:intergenic
AAATCCTTTGTTAGAGTGTT+TGG 0.294966 7_2:+82048896 None:intergenic
GGAACAGTAGATTTCATATT+CGG 0.296112 7_2:-82047586 Msa1082080:CDS
ACATAGCTTGGAAGCCATAT+TGG 0.314129 7_2:+82049511 None:intergenic
CCTGGTGAGATAGGTGTAAT+TGG 0.334751 7_2:+82049413 None:intergenic
TGCTTTCTTTACTAAAGGTT+GGG 0.335009 7_2:-82048955 Msa1082080:CDS
GAGATAGGTGTAATTGGATT+TGG 0.345211 7_2:+82049419 None:intergenic
TTGCTTTCTTTACTAAAGGT+TGG 0.347374 7_2:-82048956 Msa1082080:CDS
ATGTATAATTACCGAATGTT+GGG 0.354549 7_2:+82048511 None:intergenic
TCTCTTGCTTTCTTTACTAA+AGG 0.356675 7_2:-82048960 Msa1082080:CDS
GGTGCTGTTTCAACATATTT+GGG 0.357572 7_2:-82047397 Msa1082080:CDS
CATGCTGCTCCTGGTGAGAT+AGG 0.380293 7_2:+82049404 None:intergenic
AAGCAGTGGCACTTAGAAAC+GGG 0.398121 7_2:-82047708 Msa1082080:CDS
GACCATCCAAACAAGTTTGT+TGG 0.400252 7_2:+82049063 None:intergenic
ATGTTGCTGGGTGGCGTGCT+TGG 0.401190 7_2:-82047312 Msa1082080:CDS
AAGAGAGACACTATAGAGTT+TGG 0.403782 7_2:+82048977 None:intergenic
AACTACTTTGTAAAATAAGT+TGG 0.405498 7_2:-82046985 Msa1082080:three_prime_UTR
ATTTCTTGCTTGGTGATGAT+TGG 0.405620 7_2:-82047150 Msa1082080:CDS
GATGTACCTGTGTCTTGGTT+AGG 0.407899 7_2:+82047469 None:intergenic
AACGCTAACGTTTATGACTA+TGG 0.409138 7_2:-82049332 Msa1082080:CDS
GATGATTGGTTGCCTCAAAC+AGG 0.413849 7_2:-82047136 Msa1082080:CDS
TGGGAGAATGGATTTGCAAT+AGG 0.413977 7_2:+82049361 None:intergenic
AATGTATAATTACCGAATGT+TGG 0.421859 7_2:+82048510 None:intergenic
GTGGATTTGCATGCTGCTCC+TGG 0.426506 7_2:+82049395 None:intergenic
GATTTGCAATAGGTTGGGTC+AGG 0.427569 7_2:+82049371 None:intergenic
GAATCGCGCTGAGTAATGTT+TGG 0.438241 7_2:+82049093 None:intergenic
TTGCTTAATTCAACATTTGT+CGG 0.441396 7_2:+82046931 None:intergenic
ACGGTGGCAAATTTCTTGCT+TGG 0.445744 7_2:-82047160 Msa1082080:CDS
GCATTGAATTGTCCACTCAT+TGG 0.449744 7_2:+82047517 None:intergenic
TGTTGCTGGGTGGCGTGCTT+GGG 0.450946 7_2:-82047311 Msa1082080:CDS
AATAAATCTGTTTCTAGCGA+TGG 0.450968 7_2:-82048687 Msa1082080:CDS
TTGCTTTAATTGTACAGTTG+TGG 0.453845 7_2:+82047443 None:intergenic
CGTTTCTAAGTGCCACTGCT+TGG 0.461010 7_2:+82047710 None:intergenic
ATGAATGTTGCAGCTGTGGT+TGG 0.462240 7_2:-82047790 Msa1082080:intron
TAGTGCTCGCACAGCGGTGG+TGG 0.463374 7_2:+82049223 None:intergenic
TGAGAGGGTATTACATAGCT+TGG 0.463691 7_2:+82049499 None:intergenic
GTGTAAGACACCCCTGTTTG+AGG 0.465284 7_2:+82047124 None:intergenic
AGAATGGATTTGCAATAGGT+TGG 0.473235 7_2:+82049365 None:intergenic
GAATGGATTTGCAATAGGTT+GGG 0.475452 7_2:+82049366 None:intergenic
TACAAAGTAGTTATAGTGGA+AGG 0.476675 7_2:+82046996 None:intergenic
GATAATGTGATTAATGTTGC+TGG 0.479559 7_2:-82047325 Msa1082080:CDS
ATCATAGTGTTGTTGATGGC+TGG 0.481049 7_2:-82048548 Msa1082080:CDS
CAGTTTGAAAAGAGCTTGAA+AGG 0.481123 7_2:+82049162 None:intergenic
GCTGGGTGGCGTGCTTGGGA+TGG 0.482960 7_2:-82047307 Msa1082080:CDS
AACCAACAAACTTGTTTGGA+TGG 0.485197 7_2:-82049065 Msa1082080:CDS
CAAGCAGTGGCACTTAGAAA+CGG 0.489043 7_2:-82047709 Msa1082080:CDS
TGTGGTTGGGCAAGGATTCG+TGG 0.498726 7_2:-82047776 Msa1082080:CDS
GTTGATGGCTGGACCACATT+CGG 0.499631 7_2:-82048537 Msa1082080:CDS
AGTTGAGGTCGCTGAGCGAT+TGG 0.500496 7_2:+82049192 None:intergenic
GGCAATCATAGTGTTGTTGA+TGG 0.504634 7_2:-82048552 Msa1082080:CDS
GGATTGATGTACCTGTGTCT+TGG 0.509046 7_2:+82047464 None:intergenic
TTTGCAATAGGTTGGGTCAG+GGG 0.511394 7_2:+82049373 None:intergenic
TTTCATATTCGGAAATGCTA+AGG 0.512250 7_2:-82047575 Msa1082080:CDS
TGAATGTTGCAGCTGTGGTT+GGG 0.516948 7_2:-82047789 Msa1082080:intron
TTGAAGACACATCTTCAGCT+TGG 0.517613 7_2:-82049040 Msa1082080:CDS
GAGTTTAATAATACTGGGCC+AGG 0.520794 7_2:-82047253 Msa1082080:CDS
ATTGTGACGGTTAGTCAAGA+TGG 0.521081 7_2:-82048756 Msa1082080:CDS
CACAGCGGTGGTGGAAAGAG+TGG 0.524616 7_2:+82049232 None:intergenic
AAGTTTCTTCCAAGTTTACA+AGG 0.525874 7_2:-82049125 Msa1082080:CDS
AGTTTGGTGTCATTAGAAAG+TGG 0.527999 7_2:+82048993 None:intergenic
ATAAATCTGTTTCTAGCGAT+GGG 0.535312 7_2:-82048686 Msa1082080:CDS
ACATTCGGCTCCCCAACATT+CGG 0.540697 7_2:-82048522 Msa1082080:intron
CTACCATCAGTGCTAGAGCC+TGG 0.540713 7_2:+82047235 None:intergenic
TCATTGGAAGACGTGGATAG+AGG 0.541407 7_2:+82047533 None:intergenic
CGTAAAATTAGCTGCATCCG+TGG 0.542453 7_2:+82047180 None:intergenic
GTTCTAGAATACTCTTTCCA+TGG 0.544216 7_2:+82047370 None:intergenic
GCAATAGGTTGGGTCAGGGG+TGG 0.547288 7_2:+82049376 None:intergenic
AATTCCAAACACTCTAACAA+AGG 0.556033 7_2:-82048900 Msa1082080:CDS
ATTTGCAATAGGTTGGGTCA+GGG 0.557363 7_2:+82049372 None:intergenic
GTTGCAGCTGTGGTTGGGCA+AGG 0.558786 7_2:-82047784 Msa1082080:intron
TGGAAAGAGTGGAGCGACGT+TGG 0.560848 7_2:+82049243 None:intergenic
ACGGTTAGTCAAGATGGAAG+TGG 0.570515 7_2:-82048750 Msa1082080:CDS
ATCAACAAGACTATTATCAC+TGG 0.571651 7_2:-82048573 Msa1082080:CDS
CCAATTACACCTATCTCACC+AGG 0.573664 7_2:-82049413 Msa1082080:CDS
GTGGTTGGGCAAGGATTCGT+GGG 0.574159 7_2:-82047775 Msa1082080:CDS
CAACATATTTGGGAAGACCA+TGG 0.574540 7_2:-82047387 Msa1082080:CDS
GATGATTTAGCTTCTAGCAA+TGG 0.582638 7_2:-82047418 Msa1082080:CDS
ATGCTGAGTTTAATAATACT+GGG 0.583978 7_2:-82047258 Msa1082080:CDS
AAAGAATGAGAAATATTGAG+AGG 0.586083 7_2:+82049483 None:intergenic
GGGCCAGGCTCTAGCACTGA+TGG 0.587768 7_2:-82047238 Msa1082080:CDS
TTGTAGTGCTCGCACAGCGG+TGG 0.588898 7_2:+82049220 None:intergenic
CTATCATGTGATTAATGCCA+CGG 0.589574 7_2:-82047197 Msa1082080:CDS
TTTACAGTTGCAGTTTCGAA+GGG 0.589810 7_2:-82047669 Msa1082080:CDS
TCAAGTTGGTGAGGATGTTG+TGG 0.590169 7_2:-82048787 Msa1082080:CDS
TGCTGTGAAGCACCAAGCAG+TGG 0.592757 7_2:-82047722 Msa1082080:CDS
GATGGTAGAGTGACGTGGCA+AGG 0.596651 7_2:-82047220 Msa1082080:CDS
GAATGTTGGGGAGCCGAATG+TGG 0.602659 7_2:+82048524 None:intergenic
ATGACCATTCGTAACACAGC+AGG 0.603116 7_2:-82047745 Msa1082080:CDS
TCAGAGTGATCAAGTTGGTG+AGG 0.605937 7_2:-82048796 Msa1082080:CDS
AAGAATGAGAAATATTGAGA+GGG 0.609418 7_2:+82049484 None:intergenic
AATGTGTGTATAACGTGTCT+TGG 0.609557 7_2:+82047644 None:intergenic
CTTCTTCAGAGTGATCAAGT+TGG 0.613368 7_2:-82048801 Msa1082080:CDS
ATGGAAAGAGTATTCTAGAA+CGG 0.614937 7_2:-82047368 Msa1082080:CDS
ATGATTGGTTGCCTCAAACA+GGG 0.616738 7_2:-82047135 Msa1082080:CDS
TGATTGGTTGCCTCAAACAG+GGG 0.618420 7_2:-82047134 Msa1082080:CDS
TATCCACGTCTTCCAATGAG+TGG 0.622034 7_2:-82047529 Msa1082080:CDS
TTCAATGCAATCACTGCACA+AGG 0.625555 7_2:-82047502 Msa1082080:CDS
TGTATAATTACCGAATGTTG+GGG 0.625668 7_2:+82048512 None:intergenic
ATTGCTAGAAGCTAAATCAT+CGG 0.626819 7_2:+82047420 None:intergenic
AGCACCTGCTGTGTTACGAA+TGG 0.627389 7_2:+82047741 None:intergenic
ATAATGTGATTAATGTTGCT+GGG 0.635060 7_2:-82047324 Msa1082080:CDS
TGTCCACTCATTGGAAGACG+TGG 0.636776 7_2:+82047526 None:intergenic
CGATTTATGAGTCAGTTAGT+CGG 0.649371 7_2:-82048830 Msa1082080:CDS
TTTATGAGTCAGTTAGTCGG+AGG 0.663720 7_2:-82048827 Msa1082080:CDS
ACAGATCCTAACCAAGACAC+AGG 0.667761 7_2:-82047475 Msa1082080:CDS
TTGAAAGGAAATCAGAGTTG+AGG 0.673596 7_2:+82049177 None:intergenic
ATCTTGTAGTGCTCGCACAG+CGG 0.715861 7_2:+82049217 None:intergenic
TGTGGTGAGAGATATTGTGA+CGG 0.718292 7_2:-82048769 Msa1082080:CDS
AGCAGTGGCACTTAGAAACG+GGG 0.723770 7_2:-82047707 Msa1082080:CDS
GCACTGATGGTAGAGTGACG+TGG 0.734964 7_2:-82047225 Msa1082080:CDS
ATGTGATTAATGTTGCTGGG+TGG 0.776487 7_2:-82047321 Msa1082080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAACCAATA+TGG - chr7_2:82046890-82046909 Msa1082080:three_prime_UTR 10.0%
!! ATATATATTGATATATTTGA+TGG + chr7_2:82047948-82047967 None:intergenic 10.0%
!!! TTTAAGTTTTAGTTTTTTTT+AGG + chr7_2:82048013-82048032 None:intergenic 10.0%
!! AGACATTAATTAATTAATTA+AGG + chr7_2:82049322-82049341 None:intergenic 10.0%
!!! AAAACTTAAAGACATTTTTA+CGG - chr7_2:82048023-82048042 Msa1082080:intron 15.0%
!! AGAAATAATTTAACTATTGT+GGG - chr7_2:82048071-82048090 Msa1082080:intron 15.0%
!! AATTATTAAATTGAAAACAG+AGG + chr7_2:82048171-82048190 None:intergenic 15.0%
!!! ATCAAGTAAAGATTTTATAT+AGG - chr7_2:82048539-82048558 Msa1082080:CDS 15.0%
!! TCTAACAAAGGATTTAAAAA+CGG - chr7_2:82047527-82047546 Msa1082080:CDS 20.0%
!!! AAACTTAAAGACATTTTTAC+GGG - chr7_2:82048024-82048043 Msa1082080:intron 20.0%
!! GAGAAATAATTTAACTATTG+TGG - chr7_2:82048070-82048089 Msa1082080:intron 20.0%
!! GAAATAATTTAACTATTGTG+GGG - chr7_2:82048072-82048091 Msa1082080:intron 20.0%
!! ACACAAAATATATACATTAG+CGG - chr7_2:82048415-82048434 Msa1082080:intron 20.0%
!! GGTATGTTAAAAAAAATGTT+TGG + chr7_2:82048446-82048465 None:intergenic 20.0%
!!! AGTTTTATAAATAAAGACTG+AGG - chr7_2:82048488-82048507 Msa1082080:intron 20.0%
!!! ATTTTACAAAGTAGTTATAG+TGG + chr7_2:82049426-82049445 None:intergenic 20.0%
!! AACTACTTTGTAAAATAAGT+TGG - chr7_2:82049430-82049449 Msa1082080:CDS 20.0%
! AAGAATGAGAAATATTGAGA+GGG + chr7_2:82046934-82046953 None:intergenic 25.0%
! AAAGAATGAGAAATATTGAG+AGG + chr7_2:82046935-82046954 None:intergenic 25.0%
!! ATATTTTCACCTTGTAAACT+TGG + chr7_2:82047302-82047321 None:intergenic 25.0%
! CTAACAAAGGATTTAAAAAC+GGG - chr7_2:82047528-82047547 Msa1082080:CDS 25.0%
!!! AAGACTTTTTTGATGATGAT+TGG - chr7_2:82047812-82047831 Msa1082080:intron 25.0%
! ATGTATAATTACCGAATGTT+GGG + chr7_2:82047907-82047926 None:intergenic 25.0%
! AATGTATAATTACCGAATGT+TGG + chr7_2:82047908-82047927 None:intergenic 25.0%
! TTGATGGAAAAATATAGAAC+TGG + chr7_2:82047932-82047951 None:intergenic 25.0%
!! ATCGTTTTCGACATATTTTA+GGG + chr7_2:82048136-82048155 None:intergenic 25.0%
!! TATCGTTTTCGACATATTTT+AGG + chr7_2:82048137-82048156 None:intergenic 25.0%
! TTTATACGTTTATGCACAAA+AGG - chr7_2:82048354-82048373 Msa1082080:intron 25.0%
! AATTGAATCATTTGCAAAGA+AGG - chr7_2:82048583-82048602 Msa1082080:CDS 25.0%
! ATAATGTGATTAATGTTGCT+GGG - chr7_2:82049091-82049110 Msa1082080:CDS 25.0%
! TATGCTGAGTTTAATAATAC+TGG - chr7_2:82049156-82049175 Msa1082080:CDS 25.0%
! ATGCTGAGTTTAATAATACT+GGG - chr7_2:82049157-82049176 Msa1082080:CDS 25.0%
!! TCACTTTGTTCTTTTTCTTT+TGG - chr7_2:82049389-82049408 Msa1082080:CDS 25.0%
!! CACTTTGTTCTTTTTCTTTT+GGG - chr7_2:82049390-82049409 Msa1082080:CDS 25.0%
! TTGCTTAATTCAACATTTGT+CGG + chr7_2:82049487-82049506 None:intergenic 25.0%
! ATAGCATTTTCACAAAACAC+TGG - chr7_2:82046966-82046985 Msa1082080:three_prime_UTR 30.0%
! GTTGGAGATATTTGTTGATT+AGG + chr7_2:82047157-82047176 None:intergenic 30.0%
AAGTTTCTTCCAAGTTTACA+AGG - chr7_2:82047290-82047309 Msa1082080:CDS 30.0%
TCTCTTGCTTTCTTTACTAA+AGG - chr7_2:82047455-82047474 Msa1082080:CDS 30.0%
TTGCTTTCTTTACTAAAGGT+TGG - chr7_2:82047459-82047478 Msa1082080:CDS 30.0%
TGCTTTCTTTACTAAAGGTT+GGG - chr7_2:82047460-82047479 Msa1082080:CDS 30.0%
!! ATTTTGAAAGGCGGTTTTAT+TGG + chr7_2:82047498-82047517 None:intergenic 30.0%
!! AGAGTGTTTGGAATTTTGAA+AGG + chr7_2:82047510-82047529 None:intergenic 30.0%
AATTCCAAACACTCTAACAA+AGG - chr7_2:82047515-82047534 Msa1082080:CDS 30.0%
! AAATCCTTTGTTAGAGTGTT+TGG + chr7_2:82047522-82047541 None:intergenic 30.0%
TCGCTAGAAACAGATTTATT+TGG + chr7_2:82047728-82047747 None:intergenic 30.0%
!! AATAAATCTGTTTCTAGCGA+TGG - chr7_2:82047728-82047747 Msa1082080:CDS 30.0%
!! ATAAATCTGTTTCTAGCGAT+GGG - chr7_2:82047729-82047748 Msa1082080:CDS 30.0%
! TTTTTGATCTATGTTACTGC+TGG - chr7_2:82047755-82047774 Msa1082080:CDS 30.0%
!!! TTTTTGATGATGATTGGAGA+TGG - chr7_2:82047818-82047837 Msa1082080:intron 30.0%
ATCAACAAGACTATTATCAC+TGG - chr7_2:82047842-82047861 Msa1082080:intron 30.0%
TGTATAATTACCGAATGTTG+GGG + chr7_2:82047906-82047925 None:intergenic 30.0%
TACAGAGAATGTGACATTTA+TGG - chr7_2:82048808-82048827 Msa1082080:CDS 30.0%
GGAACAGTAGATTTCATATT+CGG - chr7_2:82048829-82048848 Msa1082080:CDS 30.0%
TTTCATATTCGGAAATGCTA+AGG - chr7_2:82048840-82048859 Msa1082080:CDS 30.0%
TTGCTTTAATTGTACAGTTG+TGG + chr7_2:82048975-82048994 None:intergenic 30.0%
ATTGCTAGAAGCTAAATCAT+CGG + chr7_2:82048998-82049017 None:intergenic 30.0%
!! ATGGAAAGAGTATTCTAGAA+CGG - chr7_2:82049047-82049066 Msa1082080:CDS 30.0%
GGTTTACATGCAAACATTTA+TGG - chr7_2:82049068-82049087 Msa1082080:CDS 30.0%
GATAATGTGATTAATGTTGC+TGG - chr7_2:82049090-82049109 Msa1082080:CDS 30.0%
! TACAAAGTAGTTATAGTGGA+AGG + chr7_2:82049422-82049441 None:intergenic 30.0%
GAGATAGGTGTAATTGGATT+TGG + chr7_2:82046999-82047018 None:intergenic 35.0%
! GAATGGATTTGCAATAGGTT+GGG + chr7_2:82047052-82047071 None:intergenic 35.0%
! AGAATGGATTTGCAATAGGT+TGG + chr7_2:82047053-82047072 None:intergenic 35.0%
! TCATAAACGTTAGCGTTTTG+AGG + chr7_2:82047080-82047099 None:intergenic 35.0%
AACGCTAACGTTTATGACTA+TGG - chr7_2:82047083-82047102 Msa1082080:three_prime_UTR 35.0%
TTGAAAGGAAATCAGAGTTG+AGG + chr7_2:82047241-82047260 None:intergenic 35.0%
CAGTTTGAAAAGAGCTTGAA+AGG + chr7_2:82047256-82047275 None:intergenic 35.0%
! GACAAACCAACAAACTTGTT+TGG - chr7_2:82047346-82047365 Msa1082080:CDS 35.0%
! AACCAACAAACTTGTTTGGA+TGG - chr7_2:82047350-82047369 Msa1082080:CDS 35.0%
!! AGTTTGGTGTCATTAGAAAG+TGG + chr7_2:82047425-82047444 None:intergenic 35.0%
AAGAGAGACACTATAGAGTT+TGG + chr7_2:82047441-82047460 None:intergenic 35.0%
!!! AAGGCGGTTTTATTGGTTTT+GGG + chr7_2:82047491-82047510 None:intergenic 35.0%
!!! AAAGGCGGTTTTATTGGTTT+TGG + chr7_2:82047492-82047511 None:intergenic 35.0%
!! GTGTTTGGAATTTTGAAAGG+CGG + chr7_2:82047507-82047526 None:intergenic 35.0%
CGATTTATGAGTCAGTTAGT+CGG - chr7_2:82047585-82047604 Msa1082080:CDS 35.0%
! TTTTATGAATGTTGCAGCTG+TGG - chr7_2:82048621-82048640 Msa1082080:CDS 35.0%
! TTTTACAGTTGCAGTTTCGA+AGG - chr7_2:82048745-82048764 Msa1082080:CDS 35.0%
TTTACAGTTGCAGTTTCGAA+GGG - chr7_2:82048746-82048765 Msa1082080:CDS 35.0%
AATGTGTGTATAACGTGTCT+TGG + chr7_2:82048774-82048793 None:intergenic 35.0%
! GTGGATAGAGGTTACAATTT+TGG + chr7_2:82048873-82048892 None:intergenic 35.0%
! GATGATTTAGCTTCTAGCAA+TGG - chr7_2:82048997-82049016 Msa1082080:CDS 35.0%
!! TGGTGCTGTTTCAACATATT+TGG - chr7_2:82049017-82049036 Msa1082080:CDS 35.0%
!! GGTGCTGTTTCAACATATTT+GGG - chr7_2:82049018-82049037 Msa1082080:CDS 35.0%
!! GTTCTAGAATACTCTTTCCA+TGG + chr7_2:82049048-82049067 None:intergenic 35.0%
CTATCATGTGATTAATGCCA+CGG - chr7_2:82049218-82049237 Msa1082080:CDS 35.0%
!! ATTTCTTGCTTGGTGATGAT+TGG - chr7_2:82049265-82049284 Msa1082080:CDS 35.0%
ACATAGCTTGGAAGCCATAT+TGG + chr7_2:82046907-82046926 None:intergenic 40.0%
!! TGAGAGGGTATTACATAGCT+TGG + chr7_2:82046919-82046938 None:intergenic 40.0%
! ATTTGCAATAGGTTGGGTCA+GGG + chr7_2:82047046-82047065 None:intergenic 40.0%
! TGGGAGAATGGATTTGCAAT+AGG + chr7_2:82047057-82047076 None:intergenic 40.0%
!!! AAACGTTAGCGTTTTGAGGT+GGG + chr7_2:82047076-82047095 None:intergenic 40.0%
!!! TAAACGTTAGCGTTTTGAGG+TGG + chr7_2:82047077-82047096 None:intergenic 40.0%
GACCATCCAAACAAGTTTGT+TGG + chr7_2:82047355-82047374 None:intergenic 40.0%
TTGAAGACACATCTTCAGCT+TGG - chr7_2:82047375-82047394 Msa1082080:CDS 40.0%
! TCAGCTTGGAGTTTTCGAAA+TGG - chr7_2:82047389-82047408 Msa1082080:CDS 40.0%
! GTTTTGCTCGTCATCTTAAG+CGG + chr7_2:82047560-82047579 None:intergenic 40.0%
TTTATGAGTCAGTTAGTCGG+AGG - chr7_2:82047588-82047607 Msa1082080:CDS 40.0%
CTTCTTCAGAGTGATCAAGT+TGG - chr7_2:82047614-82047633 Msa1082080:CDS 40.0%
TGTGGTGAGAGATATTGTGA+CGG - chr7_2:82047646-82047665 Msa1082080:CDS 40.0%
! ATTGTGACGGTTAGTCAAGA+TGG - chr7_2:82047659-82047678 Msa1082080:CDS 40.0%
! GGCAATCATAGTGTTGTTGA+TGG - chr7_2:82047863-82047882 Msa1082080:intron 40.0%
!! ATCATAGTGTTGTTGATGGC+TGG - chr7_2:82047867-82047886 Msa1082080:intron 40.0%
GCATTGAATTGTCCACTCAT+TGG + chr7_2:82048901-82048920 None:intergenic 40.0%
TTCAATGCAATCACTGCACA+AGG - chr7_2:82048913-82048932 Msa1082080:CDS 40.0%
CAACATATTTGGGAAGACCA+TGG - chr7_2:82049028-82049047 Msa1082080:CDS 40.0%
ATGTGATTAATGTTGCTGGG+TGG - chr7_2:82049094-82049113 Msa1082080:CDS 40.0%
GAGTTTAATAATACTGGGCC+AGG - chr7_2:82049162-82049181 Msa1082080:CDS 40.0%
! CACGGATGCAGCTAATTTTA+CGG - chr7_2:82049236-82049255 Msa1082080:CDS 40.0%
! ATGATTGGTTGCCTCAAACA+GGG - chr7_2:82049280-82049299 Msa1082080:CDS 40.0%
CCTGGTGAGATAGGTGTAAT+TGG + chr7_2:82047005-82047024 None:intergenic 45.0%
CCAATTACACCTATCTCACC+AGG - chr7_2:82047002-82047021 Msa1082080:three_prime_UTR 45.0%
! TTTGCAATAGGTTGGGTCAG+GGG + chr7_2:82047045-82047064 None:intergenic 45.0%
! GATTTGCAATAGGTTGGGTC+AGG + chr7_2:82047047-82047066 None:intergenic 45.0%
GAATCGCGCTGAGTAATGTT+TGG + chr7_2:82047325-82047344 None:intergenic 45.0%
!! TCAGAGTGATCAAGTTGGTG+AGG - chr7_2:82047619-82047638 Msa1082080:CDS 45.0%
!! TCAAGTTGGTGAGGATGTTG+TGG - chr7_2:82047628-82047647 Msa1082080:CDS 45.0%
! ACGGTTAGTCAAGATGGAAG+TGG - chr7_2:82047665-82047684 Msa1082080:CDS 45.0%
ATGAATGTTGCAGCTGTGGT+TGG - chr7_2:82048625-82048644 Msa1082080:CDS 45.0%
TGAATGTTGCAGCTGTGGTT+GGG - chr7_2:82048626-82048645 Msa1082080:CDS 45.0%
ATGACCATTCGTAACACAGC+AGG - chr7_2:82048670-82048689 Msa1082080:CDS 45.0%
CAAGCAGTGGCACTTAGAAA+CGG - chr7_2:82048706-82048725 Msa1082080:CDS 45.0%
AAGCAGTGGCACTTAGAAAC+GGG - chr7_2:82048707-82048726 Msa1082080:CDS 45.0%
TCATTGGAAGACGTGGATAG+AGG + chr7_2:82048885-82048904 None:intergenic 45.0%
TATCCACGTCTTCCAATGAG+TGG - chr7_2:82048886-82048905 Msa1082080:CDS 45.0%
ACAGATCCTAACCAAGACAC+AGG - chr7_2:82048940-82048959 Msa1082080:CDS 45.0%
GATGTACCTGTGTCTTGGTT+AGG + chr7_2:82048949-82048968 None:intergenic 45.0%
GGATTGATGTACCTGTGTCT+TGG + chr7_2:82048954-82048973 None:intergenic 45.0%
CGTAAAATTAGCTGCATCCG+TGG + chr7_2:82049238-82049257 None:intergenic 45.0%
! GGATGCAGCTAATTTTACGG+TGG - chr7_2:82049239-82049258 Msa1082080:CDS 45.0%
ACGGTGGCAAATTTCTTGCT+TGG - chr7_2:82049255-82049274 Msa1082080:CDS 45.0%
! GATGATTGGTTGCCTCAAAC+AGG - chr7_2:82049279-82049298 Msa1082080:CDS 45.0%
! TGATTGGTTGCCTCAAACAG+GGG - chr7_2:82049281-82049300 Msa1082080:CDS 45.0%
!!! TTTTTTTTATAATATTTTTC+AGG + chr7_2:82048467-82048486 None:intergenic 5.0%
!!! AGCGTTTTGAGGTGGGAGAA+TGG + chr7_2:82047069-82047088 None:intergenic 50.0%
ATCTTGTAGTGCTCGCACAG+CGG + chr7_2:82047201-82047220 None:intergenic 50.0%
!! GTTGATGGCTGGACCACATT+CGG - chr7_2:82047878-82047897 Msa1082080:intron 50.0%
ACATTCGGCTCCCCAACATT+CGG - chr7_2:82047893-82047912 Msa1082080:intron 50.0%
ATTGTGGGGCTCACACATAG+AGG - chr7_2:82048086-82048105 Msa1082080:intron 50.0%
TTGTGGGGCTCACACATAGA+GGG - chr7_2:82048087-82048106 Msa1082080:intron 50.0%
AGCACCTGCTGTGTTACGAA+TGG + chr7_2:82048677-82048696 None:intergenic 50.0%
! CGTTTCTAAGTGCCACTGCT+TGG + chr7_2:82048708-82048727 None:intergenic 50.0%
AGCAGTGGCACTTAGAAACG+GGG - chr7_2:82048708-82048727 Msa1082080:CDS 50.0%
TGTCCACTCATTGGAAGACG+TGG + chr7_2:82048892-82048911 None:intergenic 50.0%
GTGTAAGACACCCCTGTTTG+AGG + chr7_2:82049294-82049313 None:intergenic 50.0%
CATGCTGCTCCTGGTGAGAT+AGG + chr7_2:82047014-82047033 None:intergenic 55.0%
GTGGATTTGCATGCTGCTCC+TGG + chr7_2:82047023-82047042 None:intergenic 55.0%
TGGAAAGAGTGGAGCGACGT+TGG + chr7_2:82047175-82047194 None:intergenic 55.0%
AGTTGAGGTCGCTGAGCGAT+TGG + chr7_2:82047226-82047245 None:intergenic 55.0%
GAATGTTGGGGAGCCGAATG+TGG + chr7_2:82047894-82047913 None:intergenic 55.0%
TGTGGTTGGGCAAGGATTCG+TGG - chr7_2:82048639-82048658 Msa1082080:CDS 55.0%
GTGGTTGGGCAAGGATTCGT+GGG - chr7_2:82048640-82048659 Msa1082080:CDS 55.0%
! TGCTGTGAAGCACCAAGCAG+TGG - chr7_2:82048693-82048712 Msa1082080:CDS 55.0%
CTACCATCAGTGCTAGAGCC+TGG + chr7_2:82049183-82049202 None:intergenic 55.0%
! GCACTGATGGTAGAGTGACG+TGG - chr7_2:82049190-82049209 Msa1082080:CDS 55.0%
GATGGTAGAGTGACGTGGCA+AGG - chr7_2:82049195-82049214 Msa1082080:CDS 55.0%
! GCAATAGGTTGGGTCAGGGG+TGG + chr7_2:82047042-82047061 None:intergenic 60.0%
!! CACAGCGGTGGTGGAAAGAG+TGG + chr7_2:82047186-82047205 None:intergenic 60.0%
TTGTAGTGCTCGCACAGCGG+TGG + chr7_2:82047198-82047217 None:intergenic 60.0%
GTTGCAGCTGTGGTTGGGCA+AGG - chr7_2:82048631-82048650 Msa1082080:CDS 60.0%
ATGTTGCTGGGTGGCGTGCT+TGG - chr7_2:82049103-82049122 Msa1082080:CDS 60.0%
TGTTGCTGGGTGGCGTGCTT+GGG - chr7_2:82049104-82049123 Msa1082080:CDS 60.0%
TAGTGCTCGCACAGCGGTGG+TGG + chr7_2:82047195-82047214 None:intergenic 65.0%
! GGGCCAGGCTCTAGCACTGA+TGG - chr7_2:82049177-82049196 Msa1082080:CDS 65.0%
GCTGGGTGGCGTGCTTGGGA+TGG - chr7_2:82049108-82049127 Msa1082080:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 82046889 82049548 82046889 ID=Msa1082080;Name=Msa1082080
chr7_2 mRNA 82046889 82049548 82046889 ID=Msa1082080-mRNA-1;Parent=Msa1082080;Name=Msa1082080-mRNA-1;_AED=0.24;_eAED=0.24;_QI=20|1|1|1|1|1|2|216|566
chr7_2 exon 82046889 82047799 82046889 ID=Msa1082080-mRNA-1:exon:21139;Parent=Msa1082080-mRNA-1
chr7_2 exon 82048523 82049548 82048523 ID=Msa1082080-mRNA-1:exon:21138;Parent=Msa1082080-mRNA-1
chr7_2 five_prime_UTR 82049529 82049548 82049529 ID=Msa1082080-mRNA-1:five_prime_utr;Parent=Msa1082080-mRNA-1
chr7_2 CDS 82048523 82049528 82048523 ID=Msa1082080-mRNA-1:cds;Parent=Msa1082080-mRNA-1
chr7_2 CDS 82047105 82047799 82047105 ID=Msa1082080-mRNA-1:cds;Parent=Msa1082080-mRNA-1
chr7_2 three_prime_UTR 82046889 82047104 82046889 ID=Msa1082080-mRNA-1:three_prime_utr;Parent=Msa1082080-mRNA-1
Gene Sequence

>Msa1082080

ATGGCTTCCAAGCTATGTAATACCCTCTCAATATTTCTCATTCTTTTATCTGTCTCTATAGCATTTTCACAAAACACTGGTACTAGTCCAAATCCAATTACACCTATCTCACCAGGAGCAGCATGCAAATCCACCCCTGACCCAACCTATTGCAAATCCATTCTCCCACCTCAAAACGCTAACGTTTATGACTATGGTCGATTTTCAGTCAAAAAATCACTATCACAATCTCGACAATTCTCAAACCTAATCAACAAATATCTCCAACGTCGCTCCACTCTTTCCACCACCGCTGTGCGAGCACTACAAGATTGCCAATCGCTCAGCGACCTCAACTCTGATTTCCTTTCAAGCTCTTTTCAAACTGTTAACAAAACAACAAAGTTTCTTCCAAGTTTACAAGGTGAAAATATCCAAACATTACTCAGCGCGATTCTGACAAACCAACAAACTTGTTTGGATGGTCTTGAAGACACATCTTCAGCTTGGAGTTTTCGAAATGGACTCACAATTCCACTTTCTAATGACACCAAACTCTATAGTGTCTCTCTTGCTTTCTTTACTAAAGGTTGGGTTAATCCCAAAACCAATAAAACCGCCTTTCAAAATTCCAAACACTCTAACAAAGGATTTAAAAACGGGCGTTTACCGCTTAAGATGACGAGCAAAACACGCGCGATTTATGAGTCAGTTAGTCGGAGGAAACTTCTTCAGAGTGATCAAGTTGGTGAGGATGTTGTGGTGAGAGATATTGTGACGGTTAGTCAAGATGGAAGTGGAAACTTTACTACGATTAATGATGCTATTGCTGCAGCTCCAAATAAATCTGTTTCTAGCGATGGGTATTTTTTGATCTATGTTACTGCTGGTGTTTATGAAGAATATGTTACTATCGATAAGAAAAAGACTTTTTTGATGATGATTGGAGATGGTATCAACAAGACTATTATCACTGGCAATCATAGTGTTGTTGATGGCTGGACCACATTCGGCTCCCCAACATTCGCTGTGGTTGGGCAAGGATTCGTGGGTGTGAACATGACCATTCGTAACACAGCAGGTGCTGTGAAGCACCAAGCAGTGGCACTTAGAAACGGGGCAGATTTATCAACATTTTACAGTTGCAGTTTCGAAGGGTACCAAGACACGTTATACACACATTCACTAAGACAATTCTACAGAGAATGTGACATTTATGGAACAGTAGATTTCATATTCGGAAATGCTAAGGTTGTTTTCCAAAATTGTAACCTCTATCCACGTCTTCCAATGAGTGGACAATTCAATGCAATCACTGCACAAGGAAGAACAGATCCTAACCAAGACACAGGTACATCAATCCACAACTGTACAATTAAAGCAACCGATGATTTAGCTTCTAGCAATGGTGCTGTTTCAACATATTTGGGAAGACCATGGAAAGAGTATTCTAGAACGGTTTACATGCAAACATTTATGGATAATGTGATTAATGTTGCTGGGTGGCGTGCTTGGGATGGAGAATTTGCATTGAGCACATTGTATTATGCTGAGTTTAATAATACTGGGCCAGGCTCTAGCACTGATGGTAGAGTGACGTGGCAAGGCTATCATGTGATTAATGCCACGGATGCAGCTAATTTTACGGTGGCAAATTTCTTGCTTGGTGATGATTGGTTGCCTCAAACAGGGGTGTCTTACACTAATTCCTTAATTAATTAA
Protein sequence

>Msa1082080

MASKLCNTLSIFLILLSVSIAFSQNTGTSPNPITPISPGAACKSTPDPTYCKSILPPQNANVYDYGRFSVKKSLSQSRQFSNLINKYLQRRSTLSTTAVRALQDCQSLSDLNSDFLSSSFQTVNKTTKFLPSLQGENIQTLLSAILTNQQTCLDGLEDTSSAWSFRNGLTIPLSNDTKLYSVSLAFFTKGWVNPKTNKTAFQNSKHSNKGFKNGRLPLKMTSKTRAIYESVSRRKLLQSDQVGEDVVVRDIVTVSQDGSGNFTTINDAIAAAPNKSVSSDGYFLIYVTAGVYEEYVTIDKKKTFLMMIGDGINKTIITGNHSVVDGWTTFGSPTFAVVGQGFVGVNMTIRNTAGAVKHQAVALRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAKVVFQNCNLYPRLPMSGQFNAITAQGRTDPNQDTGTSIHNCTIKATDDLASSNGAVSTYLGRPWKEYSRTVYMQTFMDNVINVAGWRAWDGEFALSTLYYAEFNNTGPGSSTDGRVTWQGYHVINATDAANFTVANFLLGDDWLPQTGVSYTNSLIN*