Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011710.t1 | NP_195713.1 | 100 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 8.90E-65 | 256.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011710.t1 | P59169 | 100.0 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 2.1e-67 | 256.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011710.t1 | A0A0V0RDG7 | 100.0 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 6.4e-65 | 256.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011710.t1 | MTR_4g097175 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.33e-96 | 274 |
MS.gene011710.t1 | MTR_1g023630 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.33e-96 | 274 |
MS.gene011710.t1 | MTR_8g061940 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.33e-96 | 274 |
MS.gene011710.t1 | MTR_8g099430 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 4.84e-96 | 272 |
MS.gene011710.t1 | MTR_4g097170 | 99.265 | 136 | 1 | 0 | 1 | 136 | 42 | 177 | 7.71e-95 | 271 |
MS.gene011710.t1 | MTR_7g059070 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
MS.gene011710.t1 | MTR_5g029820 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
MS.gene011710.t1 | MTR_5g029770 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
MS.gene011710.t1 | MTR_4g065990 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
MS.gene011710.t1 | MTR_4g088150 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
MS.gene011710.t1 | MTR_2g035230 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
MS.gene011710.t1 | MTR_8g092720 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
MS.gene011710.t1 | MTR_8g063500 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
MS.gene011710.t1 | MTR_8g103245 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
MS.gene011710.t1 | MTR_8g092820 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
MS.gene011710.t1 | MTR_7g013610 | 97.059 | 136 | 4 | 0 | 1 | 136 | 100 | 235 | 2.63e-92 | 266 |
MS.gene011710.t1 | MTR_2g082310 | 92.647 | 136 | 10 | 0 | 1 | 136 | 1 | 136 | 4.16e-90 | 257 |
MS.gene011710.t1 | MTR_2g082340 | 92.647 | 136 | 10 | 0 | 1 | 136 | 1 | 136 | 4.16e-90 | 257 |
MS.gene011710.t1 | MTR_2g082370 | 86.301 | 146 | 10 | 1 | 1 | 136 | 1 | 146 | 3.79e-84 | 243 |
MS.gene011710.t1 | MTR_2g082400 | 85.294 | 136 | 18 | 2 | 1 | 135 | 1 | 135 | 1.39e-76 | 223 |
MS.gene011710.t1 | MTR_7g013600 | 83.036 | 112 | 19 | 0 | 25 | 136 | 2 | 113 | 1.72e-62 | 187 |
MS.gene011710.t1 | MTR_7g023830 | 67.164 | 134 | 43 | 1 | 1 | 134 | 1 | 133 | 3.79e-56 | 172 |
MS.gene011710.t1 | MTR_1g023630 | 77.477 | 111 | 23 | 1 | 1 | 111 | 1 | 109 | 1.51e-54 | 167 |
MS.gene011710.t1 | MTR_7g023880 | 60.150 | 133 | 39 | 3 | 3 | 134 | 18 | 137 | 2.40e-44 | 142 |
MS.gene011710.t1 | MTR_5g024630 | 63.793 | 116 | 39 | 2 | 1 | 116 | 1 | 113 | 1.54e-42 | 136 |
MS.gene011710.t1 | MTR_5g024530 | 65.455 | 110 | 15 | 2 | 19 | 128 | 68 | 154 | 6.25e-40 | 131 |
MS.gene011710.t1 | MTR_0197s0100 | 96.970 | 66 | 2 | 0 | 1 | 66 | 1 | 66 | 1.84e-39 | 129 |
MS.gene011710.t1 | MTR_8g027840 | 56.122 | 98 | 42 | 1 | 37 | 133 | 28 | 125 | 4.65e-31 | 108 |
MS.gene011710.t1 | MTR_8g105150 | 59.783 | 92 | 3 | 2 | 37 | 127 | 11 | 69 | 1.24e-26 | 95.1 |
MS.gene011710.t1 | MTR_8g092740 | 97.368 | 38 | 1 | 0 | 99 | 136 | 118 | 155 | 5.77e-20 | 80.5 |
MS.gene011710.t1 | MTR_5g089120 | 68.085 | 47 | 15 | 0 | 82 | 128 | 6 | 52 | 1.58e-16 | 70.1 |
MS.gene011710.t1 | MTR_5g024600 | 62.963 | 54 | 20 | 0 | 1 | 54 | 1 | 54 | 1.14e-15 | 66.6 |
MS.gene011710.t1 | MTR_4g128040 | 72.973 | 37 | 10 | 0 | 79 | 115 | 20 | 56 | 6.10e-14 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011710.t1 | AT5G10980 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.39e-96 | 274 |
MS.gene011710.t1 | AT4G40040 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.39e-96 | 274 |
MS.gene011710.t1 | AT4G40040 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.39e-96 | 274 |
MS.gene011710.t1 | AT4G40040 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.39e-96 | 274 |
MS.gene011710.t1 | AT4G40030 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.39e-96 | 274 |
MS.gene011710.t1 | AT4G40030 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.39e-96 | 274 |
MS.gene011710.t1 | AT4G40030 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.39e-96 | 274 |
MS.gene011710.t1 | AT4G40030 | 100.000 | 136 | 0 | 0 | 1 | 136 | 29 | 164 | 2.04e-96 | 275 |
MS.gene011710.t1 | AT5G65360 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.84e-93 | 265 |
MS.gene011710.t1 | AT5G10390 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.84e-93 | 265 |
MS.gene011710.t1 | AT5G10400 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.84e-93 | 265 |
MS.gene011710.t1 | AT3G27360 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.84e-93 | 265 |
MS.gene011710.t1 | AT1G09200 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.84e-93 | 265 |
MS.gene011710.t1 | AT1G75600 | 96.324 | 136 | 5 | 0 | 1 | 136 | 1 | 136 | 1.02e-92 | 264 |
MS.gene011710.t1 | AT1G13370 | 94.853 | 136 | 7 | 0 | 1 | 136 | 1 | 136 | 2.16e-91 | 261 |
MS.gene011710.t1 | AT5G65350 | 92.647 | 136 | 10 | 0 | 1 | 136 | 1 | 136 | 1.27e-88 | 254 |
MS.gene011710.t1 | AT1G19890 | 90.511 | 137 | 12 | 1 | 1 | 136 | 1 | 137 | 1.89e-85 | 246 |
MS.gene011710.t1 | AT5G12910 | 71.111 | 135 | 34 | 2 | 1 | 135 | 1 | 130 | 1.15e-65 | 196 |
MS.gene011710.t1 | AT1G01370 | 54.867 | 113 | 48 | 2 | 24 | 134 | 63 | 174 | 3.24e-32 | 112 |
MS.gene011710.t1 | AT1G01370 | 54.867 | 113 | 48 | 2 | 24 | 134 | 63 | 174 | 3.24e-32 | 112 |
MS.gene011710.t1 | AT1G01370 | 54.867 | 113 | 48 | 2 | 24 | 134 | 63 | 174 | 3.24e-32 | 112 |
MS.gene011710.t1 | AT1G01370 | 54.867 | 113 | 48 | 2 | 24 | 134 | 63 | 174 | 3.24e-32 | 112 |
Find 44 sgRNAs with CRISPR-Local
Find 57 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGGTTGCAAGTTGCTTCCT+TGG | 0.333909 | 8.3:-22193572 | None:intergenic |
CACCGAAGAGCAACAGTTCC+TGG | 0.341134 | 8.3:-22193759 | None:intergenic |
TCAAGAGCTCGGTACTCTTC+TGG | 0.348030 | 8.3:-22193931 | None:intergenic |
CCTTGCCAACTGGATGTCCT+TGG | 0.351370 | 8.3:-22194226 | None:intergenic |
CACGGATCCTCCTTGCCAAC+TGG | 0.363910 | 8.3:-22194236 | None:intergenic |
CTTGCCAACTGGATGTCCTT+GGG | 0.434839 | 8.3:-22194225 | None:intergenic |
ATATCTTGTTGGTCTCTTTG+AGG | 0.438404 | 8.3:+22194158 | MS.gene011710:CDS |
TGAAATTGCTCAGGACTTCA+AGG | 0.441698 | 8.3:+22193985 | MS.gene011710:CDS |
TTCTTAACTCCACCAGTAGT+TGG | 0.444620 | 8.3:-22193720 | None:intergenic |
GCTGCTGAGGCATATCTTGT+TGG | 0.457640 | 8.3:+22194147 | MS.gene011710:CDS |
CACGAACCAACCTCTGGAAT+GGG | 0.467959 | 8.3:-22193964 | None:intergenic |
CGCAAGTCTGCACCAACTAC+TGG | 0.471576 | 8.3:+22193708 | MS.gene011710:CDS |
GCCCAGGAACTGTTGCTCTT+CGG | 0.472314 | 8.3:+22193757 | MS.gene011710:CDS |
CTTCCTTGGTGCCTTACCAC+CGG | 0.479634 | 8.3:-22193558 | None:intergenic |
TGCATTGCAAGAGGCTGCTG+AGG | 0.479818 | 8.3:+22194134 | MS.gene011710:CDS |
AGAGTACCGAGCTCTTGATC+AGG | 0.484025 | 8.3:+22193936 | MS.gene011710:CDS |
ATCCGTGGTGAGCGCGCCTA+AGG | 0.494321 | 8.3:+22194252 | MS.gene011710:CDS |
ATGCAAGCACAGCATGACTC+TGG | 0.500306 | 8.3:-22194116 | None:intergenic |
TCGTAAGTCAACCGGTGGTA+AGG | 0.501661 | 8.3:+22193547 | MS.gene011710:CDS |
CAATTTCACGAACCAACCTC+TGG | 0.503886 | 8.3:-22193970 | None:intergenic |
TGACTTACGAGCTGTTTGCT+TGG | 0.508768 | 8.3:-22193534 | None:intergenic |
GTTGGTTCGTGAAATTGCTC+AGG | 0.513873 | 8.3:+22193976 | MS.gene011710:CDS |
TGCTGTGCTTGCATTGCAAG+AGG | 0.513898 | 8.3:+22194125 | MS.gene011710:CDS |
CAAACAGCTCGTAAGTCAAC+CGG | 0.519692 | 8.3:+22193539 | MS.gene011710:CDS |
TCACGAACCAACCTCTGGAA+TGG | 0.521454 | 8.3:-22193965 | None:intergenic |
TAATAGTAACTCGCTTGGCA+TGG | 0.547452 | 8.3:-22194200 | None:intergenic |
CTCCTTAGGCGCGCTCACCA+CGG | 0.549887 | 8.3:-22194254 | None:intergenic |
ACCGAAGAGCAACAGTTCCT+GGG | 0.559961 | 8.3:-22193758 | None:intergenic |
GAAGCTCCCATTCCAGAGGT+TGG | 0.572362 | 8.3:+22193958 | MS.gene011710:CDS |
GGGCATAATAGTAACTCGCT+TGG | 0.573260 | 8.3:-22194205 | None:intergenic |
AAGGAAGCAACTTGCAACCA+AGG | 0.574800 | 8.3:+22193574 | MS.gene011710:CDS |
AAGCCACATCGTTATCGCCC+AGG | 0.581263 | 8.3:+22193741 | MS.gene011710:CDS |
CCAAGGACATCCAGTTGGCA+AGG | 0.588868 | 8.3:+22194226 | MS.gene011710:CDS |
GAGCTTCCTGATCAAGAGCT+CGG | 0.624511 | 8.3:-22193942 | None:intergenic |
GCGAGTTACTATTATGCCCA+AGG | 0.629580 | 8.3:+22194209 | MS.gene011710:CDS |
AAGTCTGCACCAACTACTGG+TGG | 0.650548 | 8.3:+22193711 | MS.gene011710:CDS |
TATGCCCAAGGACATCCAGT+TGG | 0.656475 | 8.3:+22194221 | MS.gene011710:CDS |
CAACCGGTGGTAAGGCACCA+AGG | 0.657003 | 8.3:+22193555 | MS.gene011710:CDS |
TCAGGAAGCTCCCATTCCAG+AGG | 0.664518 | 8.3:+22193954 | MS.gene011710:CDS |
CAGTTGGCAAGGAGGATCCG+TGG | 0.664833 | 8.3:+22194237 | MS.gene011710:CDS |
CAGCATGACTCTGGAAACGA+AGG | 0.672290 | 8.3:-22194107 | None:intergenic |
AGGACATCCAGTTGGCAAGG+AGG | 0.674393 | 8.3:+22194229 | MS.gene011710:CDS |
GTTCCTGGGCGATAACGATG+TGG | 0.684844 | 8.3:-22193744 | None:intergenic |
ACAGCTCGTAAGTCAACCGG+TGG | 0.708150 | 8.3:+22193542 | MS.gene011710:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTTCTAATAATTTGTTATT+TGG | + | chr8.3:22193875-22193894 | MS.gene011710:intron | 15.0% |
!!! | TAATAATTTGTTATTTGGAT+TGG | + | chr8.3:22193880-22193899 | MS.gene011710:intron | 15.0% |
!!! | TATTTTAAAACAGTGAGATT+AGG | + | chr8.3:22193903-22193922 | MS.gene011710:intron | 20.0% |
!!! | TTGTTTCTATTGAATTGAAT+TGG | + | chr8.3:22193848-22193867 | MS.gene011710:intron | 20.0% |
! | TCTATTGAATTGAATTGGTT+TGG | + | chr8.3:22193853-22193872 | MS.gene011710:intron | 25.0% |
!! | CTGTTGAAAATTTTCTTTCA+GGG | + | chr8.3:22193787-22193806 | MS.gene011710:intron | 25.0% |
!! | TCTGTTGAAAATTTTCTTTC+AGG | + | chr8.3:22193786-22193805 | MS.gene011710:intron | 25.0% |
!!! | TTTTTTTTTCCCTTACCTTT+AGG | + | chr8.3:22193680-22193699 | MS.gene011710:intron | 25.0% |
AAGCAACTAAAATCAAACCT+TGG | - | chr8.3:22193594-22193613 | None:intergenic | 30.0% | |
GGATGTGGTTTCTAATAATT+TGG | + | chr8.3:22194067-22194086 | MS.gene011710:intron | 30.0% | |
ATTCATGATCAGTGTAGTCA+AGG | + | chr8.3:22194046-22194065 | MS.gene011710:intron | 35.0% | |
! | ATATCTTGTTGGTCTCTTTG+AGG | + | chr8.3:22194158-22194177 | MS.gene011710:CDS | 35.0% |
TAATAGTAACTCGCTTGGCA+TGG | - | chr8.3:22194203-22194222 | None:intergenic | 40.0% | |
TGAAATTGCTCAGGACTTCA+AGG | + | chr8.3:22193985-22194004 | MS.gene011710:CDS | 40.0% | |
TTCTTAACTCCACCAGTAGT+TGG | - | chr8.3:22193723-22193742 | None:intergenic | 40.0% | |
AAGGAAGCAACTTGCAACCA+AGG | + | chr8.3:22193574-22193593 | MS.gene011710:CDS | 45.0% | |
CAAACAGCTCGTAAGTCAAC+CGG | + | chr8.3:22193539-22193558 | MS.gene011710:CDS | 45.0% | |
CAATTTCACGAACCAACCTC+TGG | - | chr8.3:22193973-22193992 | None:intergenic | 45.0% | |
GATCAGTGTAGTCAAGGATG+TGG | + | chr8.3:22194052-22194071 | MS.gene011710:intron | 45.0% | |
GCGAGTTACTATTATGCCCA+AGG | + | chr8.3:22194209-22194228 | MS.gene011710:CDS | 45.0% | |
GGGCATAATAGTAACTCGCT+TGG | - | chr8.3:22194208-22194227 | None:intergenic | 45.0% | |
TGACTTACGAGCTGTTTGCT+TGG | - | chr8.3:22193537-22193556 | None:intergenic | 45.0% | |
TTGGTTGCAAGTTGCTTCCT+TGG | - | chr8.3:22193575-22193594 | None:intergenic | 45.0% | |
!! | GTTGGTTCGTGAAATTGCTC+AGG | + | chr8.3:22193976-22193995 | MS.gene011710:CDS | 45.0% |
AAGTCTGCACCAACTACTGG+TGG | + | chr8.3:22193711-22193730 | MS.gene011710:CDS | 50.0% | |
ACCGAAGAGCAACAGTTCCT+GGG | - | chr8.3:22193761-22193780 | None:intergenic | 50.0% | |
ATGCAAGCACAGCATGACTC+TGG | - | chr8.3:22194119-22194138 | None:intergenic | 50.0% | |
CTTGCCAACTGGATGTCCTT+GGG | - | chr8.3:22194228-22194247 | None:intergenic | 50.0% | |
GAGCTTCCTGATCAAGAGCT+CGG | - | chr8.3:22193945-22193964 | None:intergenic | 50.0% | |
GCTGCTGAGGCATATCTTGT+TGG | + | chr8.3:22194147-22194166 | MS.gene011710:CDS | 50.0% | |
TATGCCCAAGGACATCCAGT+TGG | + | chr8.3:22194221-22194240 | MS.gene011710:CDS | 50.0% | |
TCAAGAGCTCGGTACTCTTC+TGG | - | chr8.3:22193934-22193953 | None:intergenic | 50.0% | |
TCGTAAGTCAACCGGTGGTA+AGG | + | chr8.3:22193547-22193566 | MS.gene011710:CDS | 50.0% | |
TGCGTGCAGCCTAAAGGTAA+GGG | - | chr8.3:22193692-22193711 | None:intergenic | 50.0% | |
TGCTGTGCTTGCATTGCAAG+AGG | + | chr8.3:22194125-22194144 | MS.gene011710:CDS | 50.0% | |
TTGCGTGCAGCCTAAAGGTA+AGG | - | chr8.3:22193693-22193712 | None:intergenic | 50.0% | |
! | CAGCATGACTCTGGAAACGA+AGG | - | chr8.3:22194110-22194129 | None:intergenic | 50.0% |
! | TCACGAACCAACCTCTGGAA+TGG | - | chr8.3:22193968-22193987 | None:intergenic | 50.0% |
!! | AGAGTACCGAGCTCTTGATC+AGG | + | chr8.3:22193936-22193955 | MS.gene011710:CDS | 50.0% |
!! | CACGAACCAACCTCTGGAAT+GGG | - | chr8.3:22193967-22193986 | None:intergenic | 50.0% |
AAGCCACATCGTTATCGCCC+AGG | + | chr8.3:22193741-22193760 | MS.gene011710:CDS | 55.0% | |
ACAGCTCGTAAGTCAACCGG+TGG | + | chr8.3:22193542-22193561 | MS.gene011710:CDS | 55.0% | |
AGGACATCCAGTTGGCAAGG+AGG | + | chr8.3:22194229-22194248 | MS.gene011710:CDS | 55.0% | |
CACCGAAGAGCAACAGTTCC+TGG | - | chr8.3:22193762-22193781 | None:intergenic | 55.0% | |
CAGACTTGCGTGCAGCCTAA+AGG | - | chr8.3:22193698-22193717 | None:intergenic | 55.0% | |
CCAAGGACATCCAGTTGGCA+AGG | + | chr8.3:22194226-22194245 | MS.gene011710:CDS | 55.0% | |
CCTTGCCAACTGGATGTCCT+TGG | - | chr8.3:22194229-22194248 | None:intergenic | 55.0% | |
CGCAAGTCTGCACCAACTAC+TGG | + | chr8.3:22193708-22193727 | MS.gene011710:CDS | 55.0% | |
GAAGCTCCCATTCCAGAGGT+TGG | + | chr8.3:22193958-22193977 | MS.gene011710:CDS | 55.0% | |
GCCCAGGAACTGTTGCTCTT+CGG | + | chr8.3:22193757-22193776 | MS.gene011710:CDS | 55.0% | |
GTTCCTGGGCGATAACGATG+TGG | - | chr8.3:22193747-22193766 | None:intergenic | 55.0% | |
TCAGGAAGCTCCCATTCCAG+AGG | + | chr8.3:22193954-22193973 | MS.gene011710:CDS | 55.0% | |
TGCATTGCAAGAGGCTGCTG+AGG | + | chr8.3:22194134-22194153 | MS.gene011710:CDS | 55.0% | |
!! | CTTCCTTGGTGCCTTACCAC+CGG | - | chr8.3:22193561-22193580 | None:intergenic | 55.0% |
CACGGATCCTCCTTGCCAAC+TGG | - | chr8.3:22194239-22194258 | None:intergenic | 60.0% | |
CAGTTGGCAAGGAGGATCCG+TGG | + | chr8.3:22194237-22194256 | MS.gene011710:CDS | 60.0% | |
! | CAACCGGTGGTAAGGCACCA+AGG | + | chr8.3:22193555-22193574 | MS.gene011710:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 22193524 | 22194272 | 22193524 | ID=MS.gene011710 |
chr8.3 | mRNA | 22193524 | 22194272 | 22193524 | ID=MS.gene011710.t1;Parent=MS.gene011710 |
chr8.3 | exon | 22193524 | 22193595 | 22193524 | ID=MS.gene011710.t1.exon1;Parent=MS.gene011710.t1 |
chr8.3 | CDS | 22193524 | 22193595 | 22193524 | ID=cds.MS.gene011710.t1;Parent=MS.gene011710.t1 |
chr8.3 | exon | 22193702 | 22193778 | 22193702 | ID=MS.gene011710.t1.exon2;Parent=MS.gene011710.t1 |
chr8.3 | CDS | 22193702 | 22193778 | 22193702 | ID=cds.MS.gene011710.t1;Parent=MS.gene011710.t1 |
chr8.3 | exon | 22193916 | 22194006 | 22193916 | ID=MS.gene011710.t1.exon3;Parent=MS.gene011710.t1 |
chr8.3 | CDS | 22193916 | 22194006 | 22193916 | ID=cds.MS.gene011710.t1;Parent=MS.gene011710.t1 |
chr8.3 | exon | 22194102 | 22194272 | 22194102 | ID=MS.gene011710.t1.exon4;Parent=MS.gene011710.t1 |
chr8.3 | CDS | 22194102 | 22194272 | 22194102 | ID=cds.MS.gene011710.t1;Parent=MS.gene011710.t1 |
Gene Sequence |
Protein sequence |