Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61193.t1 | NP_195713.1 | 100 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 8.90E-65 | 256.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61193.t1 | P59169 | 100.0 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 2.1e-67 | 256.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61193.t1 | A0A0V0RDG7 | 100.0 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 6.4e-65 | 256.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61193.t1 | MTR_4g097175 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.33e-96 | 274 |
| MS.gene61193.t1 | MTR_1g023630 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.33e-96 | 274 |
| MS.gene61193.t1 | MTR_8g061940 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.33e-96 | 274 |
| MS.gene61193.t1 | MTR_8g099430 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 4.84e-96 | 272 |
| MS.gene61193.t1 | MTR_4g097170 | 99.265 | 136 | 1 | 0 | 1 | 136 | 42 | 177 | 7.71e-95 | 271 |
| MS.gene61193.t1 | MTR_7g059070 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
| MS.gene61193.t1 | MTR_5g029820 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
| MS.gene61193.t1 | MTR_5g029770 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
| MS.gene61193.t1 | MTR_4g065990 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
| MS.gene61193.t1 | MTR_4g088150 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
| MS.gene61193.t1 | MTR_2g035230 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
| MS.gene61193.t1 | MTR_8g092720 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
| MS.gene61193.t1 | MTR_8g063500 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
| MS.gene61193.t1 | MTR_8g103245 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
| MS.gene61193.t1 | MTR_8g092820 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.29e-93 | 265 |
| MS.gene61193.t1 | MTR_7g013610 | 97.059 | 136 | 4 | 0 | 1 | 136 | 100 | 235 | 2.63e-92 | 266 |
| MS.gene61193.t1 | MTR_2g082310 | 92.647 | 136 | 10 | 0 | 1 | 136 | 1 | 136 | 4.16e-90 | 257 |
| MS.gene61193.t1 | MTR_2g082340 | 92.647 | 136 | 10 | 0 | 1 | 136 | 1 | 136 | 4.16e-90 | 257 |
| MS.gene61193.t1 | MTR_2g082370 | 86.301 | 146 | 10 | 1 | 1 | 136 | 1 | 146 | 3.79e-84 | 243 |
| MS.gene61193.t1 | MTR_2g082400 | 85.294 | 136 | 18 | 2 | 1 | 135 | 1 | 135 | 1.39e-76 | 223 |
| MS.gene61193.t1 | MTR_7g013600 | 83.036 | 112 | 19 | 0 | 25 | 136 | 2 | 113 | 1.72e-62 | 187 |
| MS.gene61193.t1 | MTR_7g023830 | 67.164 | 134 | 43 | 1 | 1 | 134 | 1 | 133 | 3.79e-56 | 172 |
| MS.gene61193.t1 | MTR_1g023630 | 77.477 | 111 | 23 | 1 | 1 | 111 | 1 | 109 | 1.51e-54 | 167 |
| MS.gene61193.t1 | MTR_7g023880 | 60.150 | 133 | 39 | 3 | 3 | 134 | 18 | 137 | 2.40e-44 | 142 |
| MS.gene61193.t1 | MTR_5g024630 | 63.793 | 116 | 39 | 2 | 1 | 116 | 1 | 113 | 1.54e-42 | 136 |
| MS.gene61193.t1 | MTR_5g024530 | 65.455 | 110 | 15 | 2 | 19 | 128 | 68 | 154 | 6.25e-40 | 131 |
| MS.gene61193.t1 | MTR_0197s0100 | 96.970 | 66 | 2 | 0 | 1 | 66 | 1 | 66 | 1.84e-39 | 129 |
| MS.gene61193.t1 | MTR_8g027840 | 56.122 | 98 | 42 | 1 | 37 | 133 | 28 | 125 | 4.65e-31 | 108 |
| MS.gene61193.t1 | MTR_8g105150 | 59.783 | 92 | 3 | 2 | 37 | 127 | 11 | 69 | 1.24e-26 | 95.1 |
| MS.gene61193.t1 | MTR_8g092740 | 97.368 | 38 | 1 | 0 | 99 | 136 | 118 | 155 | 5.77e-20 | 80.5 |
| MS.gene61193.t1 | MTR_5g089120 | 68.085 | 47 | 15 | 0 | 82 | 128 | 6 | 52 | 1.58e-16 | 70.1 |
| MS.gene61193.t1 | MTR_5g024600 | 62.963 | 54 | 20 | 0 | 1 | 54 | 1 | 54 | 1.14e-15 | 66.6 |
| MS.gene61193.t1 | MTR_4g128040 | 72.973 | 37 | 10 | 0 | 79 | 115 | 20 | 56 | 6.10e-14 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61193.t1 | AT5G10980 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.39e-96 | 274 |
| MS.gene61193.t1 | AT4G40040 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.39e-96 | 274 |
| MS.gene61193.t1 | AT4G40040 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.39e-96 | 274 |
| MS.gene61193.t1 | AT4G40040 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.39e-96 | 274 |
| MS.gene61193.t1 | AT4G40030 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.39e-96 | 274 |
| MS.gene61193.t1 | AT4G40030 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.39e-96 | 274 |
| MS.gene61193.t1 | AT4G40030 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.39e-96 | 274 |
| MS.gene61193.t1 | AT4G40030 | 100.000 | 136 | 0 | 0 | 1 | 136 | 29 | 164 | 2.04e-96 | 275 |
| MS.gene61193.t1 | AT5G65360 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.84e-93 | 265 |
| MS.gene61193.t1 | AT5G10390 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.84e-93 | 265 |
| MS.gene61193.t1 | AT5G10400 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.84e-93 | 265 |
| MS.gene61193.t1 | AT3G27360 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.84e-93 | 265 |
| MS.gene61193.t1 | AT1G09200 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.84e-93 | 265 |
| MS.gene61193.t1 | AT1G75600 | 96.324 | 136 | 5 | 0 | 1 | 136 | 1 | 136 | 1.02e-92 | 264 |
| MS.gene61193.t1 | AT1G13370 | 94.853 | 136 | 7 | 0 | 1 | 136 | 1 | 136 | 2.16e-91 | 261 |
| MS.gene61193.t1 | AT5G65350 | 92.647 | 136 | 10 | 0 | 1 | 136 | 1 | 136 | 1.27e-88 | 254 |
| MS.gene61193.t1 | AT1G19890 | 90.511 | 137 | 12 | 1 | 1 | 136 | 1 | 137 | 1.89e-85 | 246 |
| MS.gene61193.t1 | AT5G12910 | 71.111 | 135 | 34 | 2 | 1 | 135 | 1 | 130 | 1.15e-65 | 196 |
| MS.gene61193.t1 | AT1G01370 | 54.867 | 113 | 48 | 2 | 24 | 134 | 63 | 174 | 3.24e-32 | 112 |
| MS.gene61193.t1 | AT1G01370 | 54.867 | 113 | 48 | 2 | 24 | 134 | 63 | 174 | 3.24e-32 | 112 |
| MS.gene61193.t1 | AT1G01370 | 54.867 | 113 | 48 | 2 | 24 | 134 | 63 | 174 | 3.24e-32 | 112 |
| MS.gene61193.t1 | AT1G01370 | 54.867 | 113 | 48 | 2 | 24 | 134 | 63 | 174 | 3.24e-32 | 112 |
Find 44 sgRNAs with CRISPR-Local
Find 56 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGTTGCAAGTTGCTTCCT+AGG | 0.341167 | 8.4:-25202130 | None:intergenic |
| CCTTGCCAACTGGATGTCCT+TGG | 0.351370 | 8.4:-25202825 | None:intergenic |
| CACGGATCCTCCTTGCCAAC+TGG | 0.363910 | 8.4:-25202835 | None:intergenic |
| CACCGAAGAGCAACAGTTCC+GGG | 0.372127 | 8.4:-25202326 | None:intergenic |
| ATCCGTGGTGAGCGCGCTTA+AGG | 0.403617 | 8.4:+25202851 | MS.gene61193:CDS |
| TGAAATTGCTCAAGACTTCA+AGG | 0.405126 | 8.4:+25202576 | MS.gene61193:CDS |
| TCACCGAAGAGCAACAGTTC+CGG | 0.407614 | 8.4:-25202327 | None:intergenic |
| CTTGCCAACTGGATGTCCTT+GGG | 0.434839 | 8.4:-25202824 | None:intergenic |
| ATATCTTGTTGGTCTGTTTG+AGG | 0.444642 | 8.4:+25202757 | MS.gene61193:CDS |
| GCTGCTGAGGCATATCTTGT+TGG | 0.457640 | 8.4:+25202746 | MS.gene61193:CDS |
| GCCCCGGAACTGTTGCTCTT+CGG | 0.468662 | 8.4:+25202324 | MS.gene61193:CDS |
| TGCATTGCAAGAGGCTGCTG+AGG | 0.479818 | 8.4:+25202733 | MS.gene61193:CDS |
| AGAGTACTGAGCTCTTGATC+AGG | 0.482557 | 8.4:+25202527 | MS.gene61193:CDS |
| CGTAAGTCTGCTCCCACTAC+TGG | 0.483075 | 8.4:+25202275 | MS.gene61193:CDS |
| CAAACTGCTCGTAAGTCTAC+TGG | 0.493098 | 8.4:+25202097 | MS.gene61193:CDS |
| ATGCAAGCACAGCATGACTC+TGG | 0.500306 | 8.4:-25202715 | None:intergenic |
| CAATTTCACGAACCAACCTC+TGG | 0.507537 | 8.4:-25202561 | None:intergenic |
| TGCTGTGCTTGCATTGCAAG+AGG | 0.513898 | 8.4:+25202724 | MS.gene61193:CDS |
| GAAGCTCCCCTTCCAGAGGT+TGG | 0.527763 | 8.4:+25202549 | MS.gene61193:CDS |
| AGACTTACGAGCAGTTTGCT+TGG | 0.530724 | 8.4:-25202092 | None:intergenic |
| TTTCTTAACTCCACCAGTAG+TGG | 0.546326 | 8.4:-25202288 | None:intergenic |
| TAATAGTAACTCGCTTGGCA+TGG | 0.547452 | 8.4:-25202799 | None:intergenic |
| CACGAACCAACCTCTGGAAG+GGG | 0.550311 | 8.4:-25202555 | None:intergenic |
| TTCTTAACTCCACCAGTAGT+GGG | 0.561000 | 8.4:-25202287 | None:intergenic |
| GGGCATAATAGTAACTCGCT+TGG | 0.573260 | 8.4:-25202804 | None:intergenic |
| AAACCACATCGTTACCGCCC+CGG | 0.580189 | 8.4:+25202308 | MS.gene61193:CDS |
| TCACGAACCAACCTCTGGAA+GGG | 0.587957 | 8.4:-25202556 | None:intergenic |
| CCAAGGACATCCAGTTGGCA+AGG | 0.588868 | 8.4:+25202825 | MS.gene61193:CDS |
| CTCCTTAAGCGCGCTCACCA+CGG | 0.591808 | 8.4:-25202853 | None:intergenic |
| TTCACGAACCAACCTCTGGA+AGG | 0.592307 | 8.4:-25202557 | None:intergenic |
| TCGTAAGTCTACTGGTGGAA+AGG | 0.600087 | 8.4:+25202105 | MS.gene61193:CDS |
| AAGTCTGCTCCCACTACTGG+TGG | 0.603052 | 8.4:+25202278 | MS.gene61193:CDS |
| TAGGAAGCAACTTGCAACCA+AGG | 0.610266 | 8.4:+25202132 | MS.gene61193:CDS |
| GCGAGTTACTATTATGCCCA+AGG | 0.629580 | 8.4:+25202808 | MS.gene61193:CDS |
| TCAGGAAGCTCCCCTTCCAG+AGG | 0.635098 | 8.4:+25202545 | MS.gene61193:CDS |
| CTACTGGTGGAAAGGCACCT+AGG | 0.637308 | 8.4:+25202113 | MS.gene61193:CDS |
| GTTCCGGGGCGGTAACGATG+TGG | 0.646981 | 8.4:-25202311 | None:intergenic |
| ACCGAAGAGCAACAGTTCCG+GGG | 0.653413 | 8.4:-25202325 | None:intergenic |
| TATGCCCAAGGACATCCAGT+TGG | 0.656475 | 8.4:+25202820 | MS.gene61193:CDS |
| ACTGCTCGTAAGTCTACTGG+TGG | 0.660657 | 8.4:+25202100 | MS.gene61193:CDS |
| CAGTTGGCAAGGAGGATCCG+TGG | 0.664833 | 8.4:+25202836 | MS.gene61193:CDS |
| CAGCATGACTCTGGAAACGA+AGG | 0.672290 | 8.4:-25202706 | None:intergenic |
| AGGACATCCAGTTGGCAAGG+AGG | 0.674393 | 8.4:+25202828 | MS.gene61193:CDS |
| GAAGAGCAACAGTTCCGGGG+CGG | 0.724004 | 8.4:-25202322 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATGAAGTGATTGTATT+GGG | + | chr8.4:25202398-25202417 | MS.gene61193:intron | 20.0% |
| !! | TTAATATGAAGTGATTGTAT+TGG | + | chr8.4:25202397-25202416 | MS.gene61193:intron | 20.0% |
| !!! | ATTGATTGTTATTTGCATTA+TGG | + | chr8.4:25202199-25202218 | MS.gene61193:intron | 20.0% |
| !!! | TTCTGTTGAAATTTTCTTTA+AGG | + | chr8.4:25202352-25202371 | MS.gene61193:intron | 20.0% |
| !! | GAATGTTTGGTTAATTGTTT+TGG | + | chr8.4:25202227-25202246 | MS.gene61193:intron | 25.0% |
| !! | TTGTTTGAAGTAATTGTGTT+GGG | + | chr8.4:25202444-25202463 | MS.gene61193:intron | 25.0% |
| !! | TTTGTTTGAAGTAATTGTGT+TGG | + | chr8.4:25202443-25202462 | MS.gene61193:intron | 25.0% |
| !!! | TTGGTTGTTTCTGATAATTT+TGG | + | chr8.4:25202663-25202682 | MS.gene61193:intron | 25.0% |
| !!! | TTGTTTTAAACAGTGAGATT+AGG | + | chr8.4:25202494-25202513 | MS.gene61193:intron | 25.0% |
| ATCAGTTTAGATGACAGATT+TGG | + | chr8.4:25202644-25202663 | MS.gene61193:intron | 30.0% | |
| CATTATGGTGATTGAATGTT+TGG | + | chr8.4:25202214-25202233 | MS.gene61193:intron | 30.0% | |
| GATGATTCAAAAACTCACCT+TGG | - | chr8.4:25202152-25202171 | None:intergenic | 35.0% | |
| TGAAATTGCTCAAGACTTCA+AGG | + | chr8.4:25202576-25202595 | MS.gene61193:CDS | 35.0% | |
| ! | ATATCTTGTTGGTCTGTTTG+AGG | + | chr8.4:25202757-25202776 | MS.gene61193:CDS | 35.0% |
| !! | TGGTTGTTTCTGTTTCCTTT+AGG | + | chr8.4:25202247-25202266 | MS.gene61193:intron | 35.0% |
| TAATAGTAACTCGCTTGGCA+TGG | - | chr8.4:25202802-25202821 | None:intergenic | 40.0% | |
| TTCTTAACTCCACCAGTAGT+GGG | - | chr8.4:25202290-25202309 | None:intergenic | 40.0% | |
| TTTCTTAACTCCACCAGTAG+TGG | - | chr8.4:25202291-25202310 | None:intergenic | 40.0% | |
| CAAACTGCTCGTAAGTCTAC+TGG | + | chr8.4:25202097-25202116 | MS.gene61193:CDS | 45.0% | |
| CAATTTCACGAACCAACCTC+TGG | - | chr8.4:25202564-25202583 | None:intergenic | 45.0% | |
| GCGAGTTACTATTATGCCCA+AGG | + | chr8.4:25202808-25202827 | MS.gene61193:CDS | 45.0% | |
| GGGCATAATAGTAACTCGCT+TGG | - | chr8.4:25202807-25202826 | None:intergenic | 45.0% | |
| TAGGAAGCAACTTGCAACCA+AGG | + | chr8.4:25202132-25202151 | MS.gene61193:CDS | 45.0% | |
| TCGTAAGTCTACTGGTGGAA+AGG | + | chr8.4:25202105-25202124 | MS.gene61193:CDS | 45.0% | |
| TTGGTTGCAAGTTGCTTCCT+AGG | - | chr8.4:25202133-25202152 | None:intergenic | 45.0% | |
| ! | AGACTTACGAGCAGTTTGCT+TGG | - | chr8.4:25202095-25202114 | None:intergenic | 45.0% |
| !! | AGAGTACTGAGCTCTTGATC+AGG | + | chr8.4:25202527-25202546 | MS.gene61193:CDS | 45.0% |
| ACTGCTCGTAAGTCTACTGG+TGG | + | chr8.4:25202100-25202119 | MS.gene61193:CDS | 50.0% | |
| ATGCAAGCACAGCATGACTC+TGG | - | chr8.4:25202718-25202737 | None:intergenic | 50.0% | |
| CAGACTTACGTGCAGCCTAA+AGG | - | chr8.4:25202265-25202284 | None:intergenic | 50.0% | |
| CTTGCCAACTGGATGTCCTT+GGG | - | chr8.4:25202827-25202846 | None:intergenic | 50.0% | |
| GCTGCTGAGGCATATCTTGT+TGG | + | chr8.4:25202746-25202765 | MS.gene61193:CDS | 50.0% | |
| TATGCCCAAGGACATCCAGT+TGG | + | chr8.4:25202820-25202839 | MS.gene61193:CDS | 50.0% | |
| TCACCGAAGAGCAACAGTTC+CGG | - | chr8.4:25202330-25202349 | None:intergenic | 50.0% | |
| TGCTGTGCTTGCATTGCAAG+AGG | + | chr8.4:25202724-25202743 | MS.gene61193:CDS | 50.0% | |
| TTCACGAACCAACCTCTGGA+AGG | - | chr8.4:25202560-25202579 | None:intergenic | 50.0% | |
| ! | CAGCATGACTCTGGAAACGA+AGG | - | chr8.4:25202709-25202728 | None:intergenic | 50.0% |
| ! | TCACGAACCAACCTCTGGAA+GGG | - | chr8.4:25202559-25202578 | None:intergenic | 50.0% |
| AAACCACATCGTTACCGCCC+CGG | + | chr8.4:25202308-25202327 | MS.gene61193:CDS | 55.0% | |
| AAGTCTGCTCCCACTACTGG+TGG | + | chr8.4:25202278-25202297 | MS.gene61193:CDS | 55.0% | |
| ACCGAAGAGCAACAGTTCCG+GGG | - | chr8.4:25202328-25202347 | None:intergenic | 55.0% | |
| AGGACATCCAGTTGGCAAGG+AGG | + | chr8.4:25202828-25202847 | MS.gene61193:CDS | 55.0% | |
| CACCGAAGAGCAACAGTTCC+GGG | - | chr8.4:25202329-25202348 | None:intergenic | 55.0% | |
| CCAAGGACATCCAGTTGGCA+AGG | + | chr8.4:25202825-25202844 | MS.gene61193:CDS | 55.0% | |
| CCTTGCCAACTGGATGTCCT+TGG | - | chr8.4:25202828-25202847 | None:intergenic | 55.0% | |
| CGTAAGTCTGCTCCCACTAC+TGG | + | chr8.4:25202275-25202294 | MS.gene61193:CDS | 55.0% | |
| TGCATTGCAAGAGGCTGCTG+AGG | + | chr8.4:25202733-25202752 | MS.gene61193:CDS | 55.0% | |
| ! | CACGAACCAACCTCTGGAAG+GGG | - | chr8.4:25202558-25202577 | None:intergenic | 55.0% |
| !! | CTACTGGTGGAAAGGCACCT+AGG | + | chr8.4:25202113-25202132 | MS.gene61193:CDS | 55.0% |
| CACGGATCCTCCTTGCCAAC+TGG | - | chr8.4:25202838-25202857 | None:intergenic | 60.0% | |
| CAGTTGGCAAGGAGGATCCG+TGG | + | chr8.4:25202836-25202855 | MS.gene61193:CDS | 60.0% | |
| GAAGAGCAACAGTTCCGGGG+CGG | - | chr8.4:25202325-25202344 | None:intergenic | 60.0% | |
| GAAGCTCCCCTTCCAGAGGT+TGG | + | chr8.4:25202549-25202568 | MS.gene61193:CDS | 60.0% | |
| GCCCCGGAACTGTTGCTCTT+CGG | + | chr8.4:25202324-25202343 | MS.gene61193:CDS | 60.0% | |
| TCAGGAAGCTCCCCTTCCAG+AGG | + | chr8.4:25202545-25202564 | MS.gene61193:CDS | 60.0% | |
| GTTCCGGGGCGGTAACGATG+TGG | - | chr8.4:25202314-25202333 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 25202082 | 25202871 | 25202082 | ID=MS.gene61193 |
| chr8.4 | mRNA | 25202082 | 25202871 | 25202082 | ID=MS.gene61193.t1;Parent=MS.gene61193 |
| chr8.4 | exon | 25202082 | 25202153 | 25202082 | ID=MS.gene61193.t1.exon1;Parent=MS.gene61193.t1 |
| chr8.4 | CDS | 25202082 | 25202153 | 25202082 | ID=cds.MS.gene61193.t1;Parent=MS.gene61193.t1 |
| chr8.4 | exon | 25202269 | 25202345 | 25202269 | ID=MS.gene61193.t1.exon2;Parent=MS.gene61193.t1 |
| chr8.4 | CDS | 25202269 | 25202345 | 25202269 | ID=cds.MS.gene61193.t1;Parent=MS.gene61193.t1 |
| chr8.4 | exon | 25202507 | 25202597 | 25202507 | ID=MS.gene61193.t1.exon3;Parent=MS.gene61193.t1 |
| chr8.4 | CDS | 25202507 | 25202597 | 25202507 | ID=cds.MS.gene61193.t1;Parent=MS.gene61193.t1 |
| chr8.4 | exon | 25202701 | 25202871 | 25202701 | ID=MS.gene61193.t1.exon4;Parent=MS.gene61193.t1 |
| chr8.4 | CDS | 25202701 | 25202871 | 25202701 | ID=cds.MS.gene61193.t1;Parent=MS.gene61193.t1 |
| Gene Sequence |
| Protein sequence |