AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene045522

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045522.t1 MTR_4g079440 90.873 252 12 1 1 241 42 293 9.11e-171 474
MS.gene045522.t1 MTR_2g090890 60.317 252 88 2 1 241 35 285 1.29e-107 314
MS.gene045522.t1 MTR_4g107930 52.344 256 106 3 1 240 36 291 4.33e-88 265
MS.gene045522.t1 MTR_5g022560 51.953 256 107 3 1 240 35 290 1.30e-87 263
MS.gene045522.t1 MTR_4g047610 51.172 256 109 3 1 240 34 289 6.39e-87 261
MS.gene045522.t1 MTR_4g079470 51.575 254 106 4 3 240 39 291 7.68e-86 259
MS.gene045522.t1 MTR_4g079770 51.575 254 106 4 3 240 39 291 1.03e-85 258
MS.gene045522.t1 MTR_4g079800 51.181 254 107 4 3 240 39 291 1.34e-84 256
MS.gene045522.t1 MTR_2g075830 50.800 250 110 3 1 237 35 284 4.20e-82 249
MS.gene045522.t1 MTR_1g107550 50.769 260 107 4 1 241 46 303 5.86e-82 253
MS.gene045522.t1 MTR_4g080730 49.012 253 115 4 1 240 36 287 1.49e-81 248
MS.gene045522.t1 MTR_3g116080 49.200 250 112 3 5 240 47 295 1.60e-80 245
MS.gene045522.t1 MTR_4g104370 50.787 254 106 5 5 241 40 291 6.29e-80 244
MS.gene045522.t1 MTR_4g080700 47.826 253 118 4 1 240 36 287 1.49e-79 243
MS.gene045522.t1 MTR_3g075390 48.438 256 110 4 5 241 40 292 1.75e-79 243
MS.gene045522.t1 MTR_4g094918 48.627 255 113 4 5 241 35 289 2.08e-79 243
MS.gene045522.t1 MTR_4g080360 47.082 257 120 4 1 241 33 289 2.66e-78 239
MS.gene045522.t1 MTR_3g102220 46.154 260 120 3 1 240 49 308 5.19e-77 240
MS.gene045522.t1 MTR_2g083930 44.061 261 126 3 1 241 31 291 8.19e-75 231
MS.gene045522.t1 MTR_1g018840 47.059 255 113 5 5 239 55 307 1.76e-73 231
MS.gene045522.t1 MTR_1g018840 47.059 255 113 5 5 239 55 307 3.07e-73 230
MS.gene045522.t1 MTR_3g112430 44.747 257 124 5 3 241 34 290 6.16e-71 224
MS.gene045522.t1 MTR_7g078600 45.669 254 119 7 1 241 38 285 1.01e-63 202
MS.gene045522.t1 MTR_2g016180 40.000 255 134 5 5 241 51 304 1.29e-59 196
MS.gene045522.t1 MTR_2g016270 40.476 252 122 6 5 241 51 289 2.25e-58 192
MS.gene045522.t1 MTR_7g079230 42.353 255 127 7 1 241 35 283 3.33e-58 188
MS.gene045522.t1 MTR_2g015850 42.553 235 118 5 21 240 78 310 2.27e-54 179
MS.gene045522.t1 MTR_2g015920 38.521 257 136 7 5 241 53 307 2.22e-51 171
MS.gene045522.t1 MTR_4g065077 40.083 242 123 8 5 229 51 287 1.23e-49 166
MS.gene045522.t1 MTR_1g023210 36.398 261 137 8 5 241 51 306 4.21e-48 162
MS.gene045522.t1 MTR_7g078630 38.023 263 115 7 1 241 702 938 5.33e-47 167
MS.gene045522.t1 MTR_4g125300 39.044 251 135 6 5 239 51 299 2.17e-45 155
MS.gene045522.t1 MTR_4g071060 34.470 264 137 7 5 241 48 302 9.45e-45 154
MS.gene045522.t1 MTR_8g086470 37.395 238 119 7 5 229 67 287 1.09e-43 151
MS.gene045522.t1 MTR_2g067900 38.258 264 133 9 4 241 15 274 1.25e-42 147
MS.gene045522.t1 MTR_2g015930 36.822 258 140 8 5 241 52 307 1.94e-42 147
MS.gene045522.t1 MTR_1g094135 33.582 268 142 9 2 241 53 312 6.38e-40 141
MS.gene045522.t1 MTR_2g066980 37.405 262 118 9 3 241 32 270 1.57e-38 136
MS.gene045522.t1 MTR_2g067560 39.483 271 124 13 4 241 15 278 3.47e-38 141
MS.gene045522.t1 MTR_2g064475 36.271 295 125 13 4 241 15 303 1.04e-37 135
MS.gene045522.t1 MTR_4g072790 32.500 240 144 6 4 241 47 270 1.11e-33 124
MS.gene045522.t1 MTR_4g072340 32.083 240 145 6 4 241 47 270 2.05e-32 120
MS.gene045522.t1 MTR_4g073660 32.083 240 145 6 4 241 46 269 2.31e-32 120
MS.gene045522.t1 MTR_1g023810 36.747 166 92 3 87 241 49 212 1.01e-31 117
MS.gene045522.t1 MTR_2g015840 40.496 121 66 2 8 122 36 156 1.19e-24 99.0
MS.gene045522.t1 MTR_2g015840 53.333 60 27 1 182 241 161 219 1.28e-11 63.2
MS.gene045522.t1 MTR_1g025450 33.533 167 81 4 87 241 55 203 2.70e-23 98.2
MS.gene045522.t1 MTR_7g078310 37.671 146 62 5 43 169 112 247 3.23e-19 84.3
MS.gene045522.t1 MTR_8g087510 39.200 125 62 5 128 241 23 144 2.10e-16 74.7
MS.gene045522.t1 MTR_2g047960 42.857 84 38 1 96 169 7 90 5.77e-14 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045522.t1 AT1G06260 55.906 254 98 4 1 241 39 291 8.67e-97 286
MS.gene045522.t1 AT3G48340 53.125 256 96 6 5 239 38 290 1.43e-84 256
MS.gene045522.t1 AT5G43060 49.609 256 113 4 1 240 46 301 4.36e-82 253
MS.gene045522.t1 AT4G35350 49.799 249 111 2 5 239 51 299 6.70e-81 246
MS.gene045522.t1 AT5G45890 49.035 259 113 4 1 240 34 292 1.95e-80 245
MS.gene045522.t1 AT1G47128 49.004 251 113 5 5 240 50 300 8.11e-80 247
MS.gene045522.t1 AT5G50260 48.828 256 109 4 5 241 38 290 3.84e-78 239
MS.gene045522.t1 AT1G20850 47.809 251 114 3 5 239 51 300 8.96e-77 236
MS.gene045522.t1 AT3G48350 47.876 259 112 5 3 241 36 291 2.90e-76 235
MS.gene045522.t1 AT4G11310 47.431 253 117 5 5 241 49 301 4.50e-75 232
MS.gene045522.t1 AT4G35350 47.934 242 111 3 1 228 47 287 1.89e-74 228
MS.gene045522.t1 AT4G11320 47.431 253 117 6 5 241 56 308 3.78e-74 230
MS.gene045522.t1 AT4G11320 47.431 253 117 6 5 241 56 308 3.78e-74 230
MS.gene045522.t1 AT4G23520 46.032 252 121 6 5 241 47 298 2.34e-73 227
MS.gene045522.t1 AT3G49340 46.512 258 117 6 3 241 33 288 3.42e-73 226
MS.gene045522.t1 AT3G19390 44.882 254 125 4 2 240 40 293 4.50e-73 229
MS.gene045522.t1 AT3G19400 44.574 258 126 5 1 241 40 297 1.66e-71 223
MS.gene045522.t1 AT4G36880 45.136 257 117 5 8 240 52 308 1.72e-70 221
MS.gene045522.t1 AT3G48350 45.238 252 115 5 3 234 36 284 1.91e-69 215
MS.gene045522.t1 AT1G09850 43.922 255 129 3 1 241 28 282 2.66e-69 219
MS.gene045522.t1 AT2G27420 44.867 263 121 5 3 241 33 295 5.00e-69 216
MS.gene045522.t1 AT2G34080 43.243 259 126 5 1 240 35 291 1.63e-65 207
MS.gene045522.t1 AT3G19400 42.915 247 124 5 1 230 40 286 2.04e-64 202
MS.gene045522.t1 AT1G29080 42.126 254 125 6 8 241 42 293 1.71e-59 191
MS.gene045522.t1 AT1G29090 41.961 255 123 7 8 240 50 301 7.70e-58 187
MS.gene045522.t1 AT3G43960 42.041 245 122 7 5 231 41 283 1.00e-52 175
MS.gene045522.t1 AT4G39090 37.218 266 128 8 5 241 51 306 4.12e-49 165
MS.gene045522.t1 AT5G60360 37.849 251 138 5 5 239 59 307 1.35e-46 158
MS.gene045522.t1 AT5G60360 37.849 251 138 5 5 239 59 307 1.49e-46 158
MS.gene045522.t1 AT5G60360 37.849 251 138 5 5 239 59 307 1.77e-46 158
MS.gene045522.t1 AT1G29110 37.255 255 126 6 8 241 41 282 1.41e-45 155
MS.gene045522.t1 AT3G45310 36.653 251 141 6 5 239 59 307 8.49e-45 154
MS.gene045522.t1 AT3G45310 36.653 251 141 6 5 239 59 307 8.68e-45 154
MS.gene045522.t1 AT2G21430 34.749 259 144 6 5 241 48 303 1.16e-43 151
MS.gene045522.t1 AT3G54940 34.091 264 147 6 2 241 48 308 4.28e-40 142
MS.gene045522.t1 AT4G16190 33.846 260 146 6 5 241 55 311 1.15e-37 135
MS.gene045522.t1 AT3G54940 33.478 230 130 3 2 209 48 276 6.16e-37 131

Find 50 sgRNAs with CRISPR-Local

Find 73 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTCCAATCCTTGCTTTC+TGG 0.072633 4.2:-30722220 None:intergenic
AGAGTTTCAAAGTACTTATA+TGG 0.243800 4.2:+30722135 MS.gene045522:CDS
ACCTTCAAACCTCTTCTTCA+TGG 0.288966 4.2:-30721957 None:intergenic
CTTATATGGGTCTTGGTACT+AGG 0.296317 4.2:+30722149 MS.gene045522:CDS
GACGAACGGGAAGTCCGTTT+TGG 0.317728 4.2:+30722016 MS.gene045522:CDS
GCTGCAGTGGCAGCTGTAGA+AGG 0.321629 4.2:+30722540 MS.gene045522:CDS
TTTATTGTCTGTGAGATTGT+AGG 0.348908 4.2:-30722092 None:intergenic
AGGTTGCCAAGGTGGCTTAA+TGG 0.360502 4.2:+30722645 MS.gene045522:intron
GGGATCAACAAAATAAAATC+AGG 0.374637 4.2:+30722561 MS.gene045522:CDS
CAAAGTACTTATATGGGTCT+TGG 0.395625 4.2:+30722142 MS.gene045522:CDS
GGATTCAGGTATGATGAAAA+TGG 0.398407 4.2:+30722190 MS.gene045522:CDS
TGTTCACACAGGAGGTTGTT+GGG 0.402344 4.2:+30722512 MS.gene045522:intron
GTTCACATAATACAGGATTC+AGG 0.420869 4.2:+30722176 MS.gene045522:CDS
GAAGAAGAGGTTTGAAGGTT+GGG 0.426580 4.2:+30721961 MS.gene045522:CDS
GAGTTTCAAAGTACTTATAT+GGG 0.441325 4.2:+30722136 MS.gene045522:CDS
CATTATGCTGCGAGTATAAG+TGG 0.447078 4.2:+30722769 MS.gene045522:CDS
TATCCTTATGAAGGTGTAGA+TGG 0.448214 4.2:+30722721 MS.gene045522:CDS
AGCTTAGCCTCATTATCAGC+AGG 0.460600 4.2:-30722805 None:intergenic
ATACAAACATAATGACGAAC+GGG 0.476584 4.2:+30722003 MS.gene045522:CDS
TTATATGGGTCTTGGTACTA+GGG 0.478572 4.2:+30722150 MS.gene045522:CDS
GCCATGAAGAAGAGGTTTGA+AGG 0.488543 4.2:+30721956 None:intergenic
TTGCTTGGTAAATGCCAAAA+CGG 0.493062 4.2:-30722030 None:intergenic
TGAAGAAGAGGTTTGAAGGT+TGG 0.494459 4.2:+30721960 MS.gene045522:CDS
GTGTTCACACAGGAGGTTGT+TGG 0.498927 4.2:+30722511 MS.gene045522:intron
ATCTTCCAGAAAGCAAGGAT+TGG 0.515492 4.2:+30722215 MS.gene045522:CDS
TCATTTCAGCTTTATTCAGA+AGG 0.521702 4.2:+30722883 MS.gene045522:CDS
GTACCATCTACACCTTCATA+AGG 0.526767 4.2:-30722724 None:intergenic
TTCCAGAAAGCAAGGATTGG+AGG 0.532858 4.2:+30722218 MS.gene045522:CDS
GTAACTGAAATCAAGAATCA+AGG 0.536484 4.2:+30722253 MS.gene045522:CDS
TGTGGAAAGCAACTCAATCA+TGG 0.536875 4.2:+30722922 MS.gene045522:CDS
TGCATCAATTGCAACAGACA+CGG 0.539151 4.2:-30722851 None:intergenic
GTATGTATTGAACATTTGCT+TGG 0.546306 4.2:-30722045 None:intergenic
AGCAAGGATTGGAGGAAGGA+GGG 0.547902 4.2:+30722226 MS.gene045522:CDS
AGGGTGCGTTCACATAATAC+AGG 0.550141 4.2:+30722169 MS.gene045522:CDS
CTGCAGTGGCAGCTGTAGAA+GGG 0.550833 4.2:+30722541 MS.gene045522:CDS
TTGTTGGGCATTCGCTGCAG+TGG 0.553618 4.2:+30722527 MS.gene045522:CDS
TGGTGATCTTCCAGAAAGCA+AGG 0.571198 4.2:+30722210 MS.gene045522:CDS
AGAAGTTCCTGCTGATAATG+AGG 0.576412 4.2:+30722798 MS.gene045522:CDS
AAGCAAGGATTGGAGGAAGG+AGG 0.583928 4.2:+30722225 MS.gene045522:CDS
GTGTCTGTTGCAATTGATGC+AGG 0.584191 4.2:+30722853 MS.gene045522:CDS
AATACAAACATAATGACGAA+CGG 0.584501 4.2:+30722002 MS.gene045522:CDS
ACGTAGAAGCCATGAAGAAG+AGG 0.591122 4.2:+30721948 None:intergenic
GAAGGTTGGGTGAAACGACA+TGG 0.591844 4.2:+30721974 MS.gene045522:CDS
GCATCAATTGCAACAGACAC+GGG 0.598881 4.2:-30722850 None:intergenic
AGAAAGCAAGGATTGGAGGA+AGG 0.613399 4.2:+30722222 MS.gene045522:CDS
GGATCAACAAAATAAAATCA+GGG 0.617083 4.2:+30722562 MS.gene045522:CDS
TGTAGATGGTACCTGTAAGA+CGG 0.648789 4.2:+30722735 MS.gene045522:CDS
TACAAGAAACATTACCACAC+TGG 0.663674 4.2:-30722276 None:intergenic
ATCAAGAATCAAGGCCAGTG+TGG 0.700928 4.2:+30722262 MS.gene045522:CDS
TATACTCGCAGCATAATGTG+CGG 0.723834 4.2:-30722764 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATCAAGTTAAAAAAACAT+TGG - chr4.2:30722421-30722440 None:intergenic 15.0%
!! TATACATTCATCATAAAAAA+TGG + chr4.2:30722676-30722695 MS.gene045522:CDS 15.0%
!! TAGATTGTGATGTTAAAAAA+TGG + chr4.2:30722616-30722635 MS.gene045522:intron 20.0%
! AATACAAACATAATGACGAA+CGG + chr4.2:30722002-30722021 MS.gene045522:CDS 25.0%
! ACATTCATCATAAAAAATGG+CGG + chr4.2:30722679-30722698 MS.gene045522:CDS 25.0%
! ATGTGATTTCTTACAACTTA+AGG + chr4.2:30722380-30722399 MS.gene045522:intron 25.0%
! ATGTTAAAAAATGGTAACCA+AGG + chr4.2:30722625-30722644 MS.gene045522:intron 25.0%
! GGATCAACAAAATAAAATCA+GGG + chr4.2:30722562-30722581 MS.gene045522:CDS 25.0%
!! AGAGTTTCAAAGTACTTATA+TGG + chr4.2:30722135-30722154 MS.gene045522:CDS 25.0%
!! GAGTTTCAAAGTACTTATAT+GGG + chr4.2:30722136-30722155 MS.gene045522:CDS 25.0%
!! TTCATAAGGATAGTCTTTTT+CGG - chr4.2:30722713-30722732 None:intergenic 25.0%
!!! AACATTGGTATTTTAACTTG+TGG + chr4.2:30722448-30722467 MS.gene045522:intron 25.0%
ATACAAACATAATGACGAAC+GGG + chr4.2:30722003-30722022 MS.gene045522:CDS 30.0%
ATAGCTTGAATCGCATAATA+TGG - chr4.2:30722353-30722372 None:intergenic 30.0%
CTTGATATTGTACGAAACAT+TGG + chr4.2:30722433-30722452 MS.gene045522:intron 30.0%
GAAAAAGACTATCCTTATGA+AGG + chr4.2:30722712-30722731 MS.gene045522:CDS 30.0%
GGGATCAACAAAATAAAATC+AGG + chr4.2:30722561-30722580 MS.gene045522:CDS 30.0%
GTAACTGAAATCAAGAATCA+AGG + chr4.2:30722253-30722272 MS.gene045522:CDS 30.0%
GTATGTATTGAACATTTGCT+TGG - chr4.2:30722048-30722067 None:intergenic 30.0%
TTTATTGTCTGTGAGATTGT+AGG - chr4.2:30722095-30722114 None:intergenic 30.0%
TTTCTTGTAACAGAATTGCA+TGG + chr4.2:30722290-30722309 MS.gene045522:intron 30.0%
!! TCATTTCAGCTTTATTCAGA+AGG + chr4.2:30722883-30722902 MS.gene045522:CDS 30.0%
!!! TTTTTAGAGGTTCTAGGTTA+TGG + chr4.2:30722314-30722333 MS.gene045522:intron 30.0%
GGATTCAGGTATGATGAAAA+TGG + chr4.2:30722190-30722209 MS.gene045522:CDS 35.0%
GTTCACATAATACAGGATTC+AGG + chr4.2:30722176-30722195 MS.gene045522:CDS 35.0%
TACAAGAAACATTACCACAC+TGG - chr4.2:30722279-30722298 None:intergenic 35.0%
TTATATGGGTCTTGGTACTA+GGG + chr4.2:30722150-30722169 MS.gene045522:CDS 35.0%
TTGCTTGGTAAATGCCAAAA+CGG - chr4.2:30722033-30722052 None:intergenic 35.0%
! AGAATTGCATGGCTTTTTAG+AGG + chr4.2:30722301-30722320 MS.gene045522:intron 35.0%
! CAAAGTACTTATATGGGTCT+TGG + chr4.2:30722142-30722161 MS.gene045522:CDS 35.0%
! TATCCTTATGAAGGTGTAGA+TGG + chr4.2:30722721-30722740 MS.gene045522:CDS 35.0%
!!! ATAAGGATAGTCTTTTTCGG+TGG - chr4.2:30722710-30722729 None:intergenic 35.0%
!!! CTTTTAAGTTGTGTTCACAC+AGG + chr4.2:30722501-30722520 MS.gene045522:intron 35.0%
!!! TATTCAGAAGGTGTTTTCTC+TGG + chr4.2:30722895-30722914 MS.gene045522:CDS 35.0%
ATCTTCCAGAAAGCAAGGAT+TGG + chr4.2:30722215-30722234 MS.gene045522:CDS 40.0%
CATTATGCTGCGAGTATAAG+TGG + chr4.2:30722769-30722788 MS.gene045522:CDS 40.0%
CTTATATGGGTCTTGGTACT+AGG + chr4.2:30722149-30722168 MS.gene045522:CDS 40.0%
GAAGAAGAGGTTTGAAGGTT+GGG + chr4.2:30721961-30721980 MS.gene045522:CDS 40.0%
GTACCATCTACACCTTCATA+AGG - chr4.2:30722727-30722746 None:intergenic 40.0%
TATACTCGCAGCATAATGTG+CGG - chr4.2:30722767-30722786 None:intergenic 40.0%
TGAAGAAGAGGTTTGAAGGT+TGG + chr4.2:30721960-30721979 MS.gene045522:CDS 40.0%
TGCATCAATTGCAACAGACA+CGG - chr4.2:30722854-30722873 None:intergenic 40.0%
TGTAGATGGTACCTGTAAGA+CGG + chr4.2:30722735-30722754 MS.gene045522:CDS 40.0%
TGTGGAAAGCAACTCAATCA+TGG + chr4.2:30722922-30722941 MS.gene045522:CDS 40.0%
TGTGGAACATTCTCTCAAGA+TGG + chr4.2:30722466-30722485 MS.gene045522:intron 40.0%
! AGAAGTTCCTGCTGATAATG+AGG + chr4.2:30722798-30722817 MS.gene045522:CDS 40.0%
! TTAAGTTGTGTTCACACAGG+AGG + chr4.2:30722504-30722523 MS.gene045522:intron 40.0%
!! CATGGCTTTTTAGAGGTTCT+AGG + chr4.2:30722308-30722327 MS.gene045522:intron 40.0%
AATGGTAACCAAGGTTGCCA+AGG + chr4.2:30722634-30722653 MS.gene045522:intron 45.0%
AGAAAGCAAGGATTGGAGGA+AGG + chr4.2:30722222-30722241 MS.gene045522:CDS 45.0%
AGCTTAGCCTCATTATCAGC+AGG - chr4.2:30722808-30722827 None:intergenic 45.0%
AGGGTGCGTTCACATAATAC+AGG + chr4.2:30722169-30722188 MS.gene045522:CDS 45.0%
ATCAAGAATCAAGGCCAGTG+TGG + chr4.2:30722262-30722281 MS.gene045522:CDS 45.0%
GCATCAATTGCAACAGACAC+GGG - chr4.2:30722853-30722872 None:intergenic 45.0%
GTGTCTGTTGCAATTGATGC+AGG + chr4.2:30722853-30722872 MS.gene045522:CDS 45.0%
TGGTGATCTTCCAGAAAGCA+AGG + chr4.2:30722210-30722229 MS.gene045522:CDS 45.0%
TGTTCACACAGGAGGTTGTT+GGG + chr4.2:30722512-30722531 MS.gene045522:intron 45.0%
TTCCAGAAAGCAAGGATTGG+AGG + chr4.2:30722218-30722237 MS.gene045522:CDS 45.0%
TTCCTCCAATCCTTGCTTTC+TGG - chr4.2:30722223-30722242 None:intergenic 45.0%
! GGTGTTTTCTCTGGCATTTG+TGG + chr4.2:30722904-30722923 MS.gene045522:CDS 45.0%
AAGCAAGGATTGGAGGAAGG+AGG + chr4.2:30722225-30722244 MS.gene045522:CDS 50.0%
AGCAAGGATTGGAGGAAGGA+GGG + chr4.2:30722226-30722245 MS.gene045522:CDS 50.0%
AGGTTGCCAAGGTGGCTTAA+TGG + chr4.2:30722645-30722664 MS.gene045522:intron 50.0%
CTGTCTCCATTAAGCCACCT+TGG - chr4.2:30722654-30722673 None:intergenic 50.0%
GAAGGTTGGGTGAAACGACA+TGG + chr4.2:30721974-30721993 MS.gene045522:CDS 50.0%
GTGTTCACACAGGAGGTTGT+TGG + chr4.2:30722511-30722530 MS.gene045522:intron 50.0%
TTAAGCCACCTTGGCAACCT+TGG - chr4.2:30722645-30722664 None:intergenic 50.0%
!! TGCGGCTTTTTCCGTCTTAC+AGG - chr4.2:30722749-30722768 None:intergenic 50.0%
CTGCAGTGGCAGCTGTAGAA+GGG + chr4.2:30722541-30722560 MS.gene045522:CDS 55.0%
GGTAACCAAGGTTGCCAAGG+TGG + chr4.2:30722637-30722656 MS.gene045522:intron 55.0%
TTGTTGGGCATTCGCTGCAG+TGG + chr4.2:30722527-30722546 MS.gene045522:CDS 55.0%
! GACGAACGGGAAGTCCGTTT+TGG + chr4.2:30722016-30722035 MS.gene045522:CDS 55.0%
GCTGCAGTGGCAGCTGTAGA+AGG + chr4.2:30722540-30722559 MS.gene045522:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 30721959 30722954 30721959 ID=MS.gene045522
chr4.2 mRNA 30721959 30722954 30721959 ID=MS.gene045522.t1;Parent=MS.gene045522
chr4.2 exon 30721959 30722283 30721959 ID=MS.gene045522.t1.exon1;Parent=MS.gene045522.t1
chr4.2 CDS 30721959 30722283 30721959 ID=cds.MS.gene045522.t1;Parent=MS.gene045522.t1
chr4.2 exon 30722523 30722621 30722523 ID=MS.gene045522.t1.exon2;Parent=MS.gene045522.t1
chr4.2 CDS 30722523 30722621 30722523 ID=cds.MS.gene045522.t1;Parent=MS.gene045522.t1
chr4.2 exon 30722656 30722954 30722656 ID=MS.gene045522.t1.exon3;Parent=MS.gene045522.t1
chr4.2 CDS 30722656 30722954 30722656 ID=cds.MS.gene045522.t1;Parent=MS.gene045522.t1
Gene Sequence

>MS.gene045522

ATGAAGAAGAGGTTTGAAGGTTGGGTGAAACGACATGGTCGAAAATACAAACATAATGACGAACGGGAAGTCCGTTTTGGCATTTACCAAGCAAATGTTCAATACATACATTGCAAAAACGCACAGAAAAACTCCTACAATCTCACAGACAATAAATTTGCAGATCTTACGAATGAAGAGTTTCAAAGTACTTATATGGGTCTTGGTACTAGGGTGCGTTCACATAATACAGGATTCAGGTATGATGAAAATGGTGATCTTCCAGAAAGCAAGGATTGGAGGAAGGAGGGAGCAGTAACTGAAATCAAGAATCAAGGCCAGTGTGGTAATGTTTCTTGTAACAGAATTGCATGGCTTTTTAGAGGTTCTAGGTTATGGTATTTCAGTTTTACCATATTATGCGATTCAAGCTATGTTACTTATGTGATTTCTTACAACTTAAGGAACATTCTTACTCTGCCAATGTTTTTTTAACTTGATATTGTACGAAACATTGGTATTTTAACTTGTGGAACATTCTCTCAAGATGGTTGTTTTAACTACTTTTAAGTTGTGTTCACACAGGAGGTTGTTGGGCATTCGCTGCAGTGGCAGCTGTAGAAGGGATCAACAAAATAAAATCAGGGAAATTGATCTCTCTATCTGAACAAGAACTAATAGATTGTGATGTTAAAAAATGGTAACCAAGGTTGCCAAGGTGGCTTAATGGAGACAGCATATACATTCATCATAAAAAATGGCGGACTAACCACCGAAAAAGACTATCCTTATGAAGGTGTAGATGGTACCTGTAAGACGGAAAAAGCCGCACATTATGCTGCGAGTATAAGTGGATATGAAGAAGTTCCTGCTGATAATGAGGCTAAGCTTAAAGCTGCTGCAGCTCATCAACCCGTGTCTGTTGCAATTGATGCAGGAAGTTATTCATTTCAGCTTTATTCAGAAGGTGTTTTCTCTGGCATTTGTGGAAAGCAACTCAATCATGGTGTAACCGTA
Protein sequence

>MS.gene045522.t1

MKKRFEGWVKRHGRKYKHNDEREVRFGIYQANVQYIHCKNAQKNSYNLTDNKFADLTNEEFQSTYMGLGTRVRSHNTGFRYDENGDLPESKDWRKEGAVTEIKNQGQCGGCWAFAAVAAVEGINKIKSGKLISLSEQELIDCGLMETAYTFIIKNGGLTTEKDYPYEGVDGTCKTEKAAHYAASISGYEEVPADNEAKLKAAAAHQPVSVAIDAGSYSFQLYSEGVFSGICGKQLNHGVTV