Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97656.t1 | XP_003606129.1 | 97.6 | 381 | 9 | 0 | 1 | 381 | 1 | 381 | 1.20E-220 | 775.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97656.t1 | Q9SGE0 | 75.0 | 380 | 92 | 2 | 2 | 378 | 6 | 385 | 2.5e-174 | 612.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97656.t1 | G7JIF7 | 97.6 | 381 | 9 | 0 | 1 | 381 | 1 | 381 | 8.8e-221 | 775.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene97656 | 0.87388 | 1.04E-67 | -1.69E-46 |
| MS.gene049217 | MS.gene97656 | 0.800448 | 1.43E-48 | -1.69E-46 |
| MS.gene049222 | MS.gene97656 | 0.879115 | 1.62E-69 | -1.69E-46 |
| MS.gene049232 | MS.gene97656 | 0.909014 | 9.09E-82 | -1.69E-46 |
| MS.gene049285 | MS.gene97656 | 0.865076 | 7.67E-65 | -1.69E-46 |
| MS.gene049320 | MS.gene97656 | 0.864887 | 8.80E-65 | -1.69E-46 |
| MS.gene049396 | MS.gene97656 | 0.853461 | 2.35E-61 | -1.69E-46 |
| MS.gene049552 | MS.gene97656 | 0.807367 | 5.23E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene97656 | 0.880406 | 5.63E-70 | -1.69E-46 |
| MS.gene049633 | MS.gene97656 | 0.87894 | 1.87E-69 | -1.69E-46 |
| MS.gene049656 | MS.gene97656 | 0.830057 | 3.64E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene97656 | 0.835883 | 1.29E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene97656 | 0.830252 | 3.26E-55 | -1.69E-46 |
| MS.gene049865 | MS.gene97656 | 0.832419 | 9.56E-56 | -1.69E-46 |
| MS.gene05010 | MS.gene97656 | 0.879373 | 1.31E-69 | -1.69E-46 |
| MS.gene050163 | MS.gene97656 | 0.808468 | 3.05E-50 | -1.69E-46 |
| MS.gene050165 | MS.gene97656 | 0.803586 | 3.25E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene97656 | 0.928051 | 4.98E-92 | -1.69E-46 |
| MS.gene050216 | MS.gene97656 | 0.8231 | 1.66E-53 | -1.69E-46 |
| MS.gene050323 | MS.gene97656 | 0.902353 | 1.06E-78 | -1.69E-46 |
| MS.gene050496 | MS.gene97656 | 0.900871 | 4.75E-78 | -1.69E-46 |
| MS.gene050502 | MS.gene97656 | 0.875739 | 2.43E-68 | -1.69E-46 |
| MS.gene050504 | MS.gene97656 | 0.885944 | 5.25E-72 | -1.69E-46 |
| MS.gene050518 | MS.gene97656 | 0.854546 | 1.15E-61 | -1.69E-46 |
| MS.gene050538 | MS.gene97656 | 0.805265 | 1.45E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene97656 | 0.894338 | 2.71E-75 | -1.69E-46 |
| MS.gene050593 | MS.gene97656 | 0.833076 | 6.56E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene97656 | 0.86321 | 2.93E-64 | -1.69E-46 |
| MS.gene050662 | MS.gene97656 | 0.812575 | 3.96E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene97656 | 0.867466 | 1.34E-65 | -1.69E-46 |
| MS.gene050697 | MS.gene97656 | 0.850333 | 1.82E-60 | -1.69E-46 |
| MS.gene050699 | MS.gene97656 | 0.869166 | 3.80E-66 | -1.69E-46 |
| MS.gene050747 | MS.gene97656 | 0.885789 | 6.01E-72 | -1.69E-46 |
| MS.gene050772 | MS.gene97656 | 0.879607 | 1.09E-69 | -1.69E-46 |
| MS.gene05080 | MS.gene97656 | 0.883168 | 5.64E-71 | -1.69E-46 |
| MS.gene05081 | MS.gene97656 | 0.804368 | 2.23E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene97656 | 0.902598 | 8.23E-79 | -1.69E-46 |
| MS.gene050871 | MS.gene97656 | 0.904899 | 7.57E-80 | -1.69E-46 |
| MS.gene050904 | MS.gene97656 | 0.849839 | 2.50E-60 | -1.69E-46 |
| MS.gene050950 | MS.gene97656 | 0.882425 | 1.05E-70 | -1.69E-46 |
| MS.gene050986 | MS.gene97656 | 0.882247 | 1.22E-70 | -1.69E-46 |
| MS.gene051268 | MS.gene97656 | 0.836709 | 7.98E-57 | -1.69E-46 |
| MS.gene051317 | MS.gene97656 | 0.854786 | 9.76E-62 | -1.69E-46 |
| MS.gene051509 | MS.gene97656 | 0.838928 | 2.15E-57 | -1.69E-46 |
| MS.gene051551 | MS.gene97656 | 0.86349 | 2.40E-64 | -1.69E-46 |
| MS.gene051560 | MS.gene97656 | 0.817383 | 3.39E-52 | -1.69E-46 |
| MS.gene051651 | MS.gene97656 | -0.805897 | 1.07E-49 | -1.69E-46 |
| MS.gene051734 | MS.gene97656 | 0.810592 | 1.07E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene97656 | 0.8757 | 2.51E-68 | -1.69E-46 |
| MS.gene051874 | MS.gene97656 | 0.823277 | 1.51E-53 | -1.69E-46 |
| MS.gene051941 | MS.gene97656 | 0.844049 | 9.62E-59 | -1.69E-46 |
| MS.gene052066 | MS.gene97656 | 0.858818 | 6.35E-63 | -1.69E-46 |
| MS.gene052164 | MS.gene97656 | 0.899789 | 1.40E-77 | -1.69E-46 |
| MS.gene052346 | MS.gene97656 | 0.819827 | 9.46E-53 | -1.69E-46 |
| MS.gene052414 | MS.gene97656 | 0.802444 | 5.60E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene97656 | 0.867336 | 1.47E-65 | -1.69E-46 |
| MS.gene052486 | MS.gene97656 | 0.868641 | 5.61E-66 | -1.69E-46 |
| MS.gene052494 | MS.gene97656 | -0.81306 | 3.10E-51 | -1.69E-46 |
| MS.gene052501 | MS.gene97656 | 0.839329 | 1.69E-57 | -1.69E-46 |
| MS.gene052503 | MS.gene97656 | 0.907316 | 5.78E-81 | -1.69E-46 |
| MS.gene052504 | MS.gene97656 | 0.833367 | 5.56E-56 | -1.69E-46 |
| MS.gene052505 | MS.gene97656 | 0.826147 | 3.18E-54 | -1.69E-46 |
| MS.gene052506 | MS.gene97656 | 0.871167 | 8.40E-67 | -1.69E-46 |
| MS.gene052615 | MS.gene97656 | 0.855371 | 6.60E-62 | -1.69E-46 |
| MS.gene052822 | MS.gene97656 | 0.868097 | 8.41E-66 | -1.69E-46 |
| MS.gene052823 | MS.gene97656 | 0.908387 | 1.81E-81 | -1.69E-46 |
| MS.gene052825 | MS.gene97656 | 0.900409 | 7.54E-78 | -1.69E-46 |
| MS.gene052966 | MS.gene97656 | 0.882776 | 7.84E-71 | -1.69E-46 |
| MS.gene052986 | MS.gene97656 | 0.807023 | 6.19E-50 | -1.69E-46 |
| MS.gene052987 | MS.gene97656 | 0.811905 | 5.54E-51 | -1.69E-46 |
| MS.gene053117 | MS.gene97656 | 0.811152 | 8.08E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene97656 | 0.913046 | 9.68E-84 | -1.69E-46 |
| MS.gene053207 | MS.gene97656 | 0.831312 | 1.79E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene97656 | 0.871012 | 9.44E-67 | -1.69E-46 |
| MS.gene053286 | MS.gene97656 | 0.873792 | 1.12E-67 | -1.69E-46 |
| MS.gene053436 | MS.gene97656 | 0.88563 | 6.89E-72 | -1.69E-46 |
| MS.gene053479 | MS.gene97656 | 0.845614 | 3.64E-59 | -1.69E-46 |
| MS.gene053480 | MS.gene97656 | 0.866425 | 2.88E-65 | -1.69E-46 |
| MS.gene053574 | MS.gene97656 | 0.913314 | 7.10E-84 | -1.69E-46 |
| MS.gene053626 | MS.gene97656 | 0.89547 | 9.30E-76 | -1.69E-46 |
| MS.gene053632 | MS.gene97656 | 0.825647 | 4.18E-54 | -1.69E-46 |
| MS.gene053633 | MS.gene97656 | 0.852056 | 5.93E-61 | -1.69E-46 |
| MS.gene053824 | MS.gene97656 | 0.871237 | 7.97E-67 | -1.69E-46 |
| MS.gene053916 | MS.gene97656 | 0.817144 | 3.84E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene97656 | 0.800314 | 1.53E-48 | -1.69E-46 |
| MS.gene054003 | MS.gene97656 | 0.859029 | 5.49E-63 | -1.69E-46 |
| MS.gene054344 | MS.gene97656 | 0.804744 | 1.87E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene97656 | 0.843774 | 1.14E-58 | -1.69E-46 |
| MS.gene054595 | MS.gene97656 | 0.880982 | 3.50E-70 | -1.69E-46 |
| MS.gene054600 | MS.gene97656 | 0.843122 | 1.70E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene97656 | 0.842565 | 2.39E-58 | -1.69E-46 |
| MS.gene054706 | MS.gene97656 | -0.837301 | 5.64E-57 | -1.69E-46 |
| MS.gene05470 | MS.gene97656 | 0.893906 | 4.06E-75 | -1.69E-46 |
| MS.gene054927 | MS.gene97656 | 0.85162 | 7.88E-61 | -1.69E-46 |
| MS.gene05494 | MS.gene97656 | 0.80491 | 1.72E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene97656 | 0.893415 | 6.42E-75 | -1.69E-46 |
| MS.gene05505 | MS.gene97656 | 0.80723 | 5.59E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene97656 | 0.843755 | 1.15E-58 | -1.69E-46 |
| MS.gene055289 | MS.gene97656 | 0.80031 | 1.53E-48 | -1.69E-46 |
| MS.gene055362 | MS.gene97656 | 0.868034 | 8.81E-66 | -1.69E-46 |
| MS.gene055502 | MS.gene97656 | 0.882226 | 1.24E-70 | -1.69E-46 |
| MS.gene055577 | MS.gene97656 | 0.877822 | 4.62E-69 | -1.69E-46 |
| MS.gene055629 | MS.gene97656 | 0.843051 | 1.78E-58 | -1.69E-46 |
| MS.gene055722 | MS.gene97656 | 0.83833 | 3.07E-57 | -1.69E-46 |
| MS.gene055741 | MS.gene97656 | 0.814979 | 1.17E-51 | -1.69E-46 |
| MS.gene055744 | MS.gene97656 | 0.802558 | 5.30E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene97656 | 0.84923 | 3.70E-60 | -1.69E-46 |
| MS.gene055750 | MS.gene97656 | 0.862049 | 6.67E-64 | -1.69E-46 |
| MS.gene055751 | MS.gene97656 | 0.850236 | 1.93E-60 | -1.69E-46 |
| MS.gene055776 | MS.gene97656 | 0.840849 | 6.79E-58 | -1.69E-46 |
| MS.gene05589 | MS.gene97656 | 0.91501 | 9.77E-85 | -1.69E-46 |
| MS.gene055941 | MS.gene97656 | 0.830382 | 3.03E-55 | -1.69E-46 |
| MS.gene056040 | MS.gene97656 | 0.881677 | 1.97E-70 | -1.69E-46 |
| MS.gene056046 | MS.gene97656 | 0.886966 | 2.16E-72 | -1.69E-46 |
| MS.gene056166 | MS.gene97656 | 0.892521 | 1.47E-74 | -1.69E-46 |
| MS.gene056374 | MS.gene97656 | 0.802219 | 6.23E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene97656 | 0.855669 | 5.40E-62 | -1.69E-46 |
| MS.gene056446 | MS.gene97656 | 0.858722 | 6.78E-63 | -1.69E-46 |
| MS.gene056448 | MS.gene97656 | 0.802811 | 4.70E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene97656 | 0.800053 | 1.73E-48 | -1.69E-46 |
| MS.gene056504 | MS.gene97656 | 0.923631 | 2.06E-89 | -1.69E-46 |
| MS.gene056510 | MS.gene97656 | 0.897044 | 2.06E-76 | -1.69E-46 |
| MS.gene056610 | MS.gene97656 | 0.800077 | 1.71E-48 | -1.69E-46 |
| MS.gene056657 | MS.gene97656 | 0.866266 | 3.23E-65 | -1.69E-46 |
| MS.gene05666 | MS.gene97656 | 0.81157 | 6.55E-51 | -1.69E-46 |
| MS.gene056692 | MS.gene97656 | 0.837108 | 6.31E-57 | -1.69E-46 |
| MS.gene056878 | MS.gene97656 | 0.839409 | 1.61E-57 | -1.69E-46 |
| MS.gene057019 | MS.gene97656 | 0.81466 | 1.38E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene97656 | 0.868918 | 4.57E-66 | -1.69E-46 |
| MS.gene057086 | MS.gene97656 | 0.872536 | 2.95E-67 | -1.69E-46 |
| MS.gene057331 | MS.gene97656 | 0.810917 | 9.08E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene97656 | 0.838489 | 2.79E-57 | -1.69E-46 |
| MS.gene057658 | MS.gene97656 | 0.840366 | 9.08E-58 | -1.69E-46 |
| MS.gene057687 | MS.gene97656 | 0.806524 | 7.89E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene97656 | 0.856093 | 4.06E-62 | -1.69E-46 |
| MS.gene057831 | MS.gene97656 | 0.84159 | 4.33E-58 | -1.69E-46 |
| MS.gene057856 | MS.gene97656 | 0.834415 | 3.04E-56 | -1.69E-46 |
| MS.gene057857 | MS.gene97656 | 0.8275 | 1.51E-54 | -1.69E-46 |
| MS.gene057872 | MS.gene97656 | 0.828825 | 7.25E-55 | -1.69E-46 |
| MS.gene057876 | MS.gene97656 | 0.80697 | 6.35E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene97656 | 0.891986 | 2.40E-74 | -1.69E-46 |
| MS.gene058130 | MS.gene97656 | 0.837537 | 4.90E-57 | -1.69E-46 |
| MS.gene058157 | MS.gene97656 | 0.848108 | 7.56E-60 | -1.69E-46 |
| MS.gene058171 | MS.gene97656 | -0.811598 | 6.46E-51 | -1.69E-46 |
| MS.gene058173 | MS.gene97656 | -0.809185 | 2.14E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene97656 | -0.814169 | 1.77E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene97656 | -0.854472 | 1.20E-61 | -1.69E-46 |
| MS.gene058338 | MS.gene97656 | 0.831439 | 1.67E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene97656 | 0.880446 | 5.46E-70 | -1.69E-46 |
| MS.gene058419 | MS.gene97656 | 0.867199 | 1.63E-65 | -1.69E-46 |
| MS.gene058544 | MS.gene97656 | 0.866732 | 2.30E-65 | -1.69E-46 |
| MS.gene058773 | MS.gene97656 | 0.842177 | 3.03E-58 | -1.69E-46 |
| MS.gene058838 | MS.gene97656 | 0.871238 | 7.96E-67 | -1.69E-46 |
| MS.gene059022 | MS.gene97656 | 0.863241 | 2.86E-64 | -1.69E-46 |
| MS.gene059023 | MS.gene97656 | 0.883572 | 4.01E-71 | -1.69E-46 |
| MS.gene05913 | MS.gene97656 | 0.829198 | 5.89E-55 | -1.69E-46 |
| MS.gene059303 | MS.gene97656 | 0.812686 | 3.74E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene97656 | 0.857961 | 1.14E-62 | -1.69E-46 |
| MS.gene059368 | MS.gene97656 | 0.811349 | 7.32E-51 | -1.69E-46 |
| MS.gene059667 | MS.gene97656 | 0.900423 | 7.44E-78 | -1.69E-46 |
| MS.gene059677 | MS.gene97656 | 0.852398 | 4.74E-61 | -1.69E-46 |
| MS.gene059680 | MS.gene97656 | 0.803653 | 3.15E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene97656 | -0.811565 | 6.57E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene97656 | 0.888775 | 4.38E-73 | -1.69E-46 |
| MS.gene059756 | MS.gene97656 | 0.838074 | 3.57E-57 | -1.69E-46 |
| MS.gene059801 | MS.gene97656 | 0.825413 | 4.75E-54 | -1.69E-46 |
| MS.gene059837 | MS.gene97656 | 0.875904 | 2.13E-68 | -1.69E-46 |
| MS.gene059865 | MS.gene97656 | 0.914875 | 1.15E-84 | -1.69E-46 |
| MS.gene05995 | MS.gene97656 | 0.833699 | 4.59E-56 | -1.69E-46 |
| MS.gene05996 | MS.gene97656 | 0.857574 | 1.49E-62 | -1.69E-46 |
| MS.gene06000 | MS.gene97656 | 0.909063 | 8.61E-82 | -1.69E-46 |
| MS.gene060187 | MS.gene97656 | -0.808222 | 3.44E-50 | -1.69E-46 |
| MS.gene06027 | MS.gene97656 | 0.832599 | 8.62E-56 | -1.69E-46 |
| MS.gene060295 | MS.gene97656 | 0.820915 | 5.33E-53 | -1.69E-46 |
| MS.gene060372 | MS.gene97656 | 0.823349 | 1.45E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene97656 | 0.852862 | 3.49E-61 | -1.69E-46 |
| MS.gene060593 | MS.gene97656 | -0.831001 | 2.14E-55 | -1.69E-46 |
| MS.gene060595 | MS.gene97656 | -0.849304 | 3.52E-60 | -1.69E-46 |
| MS.gene060703 | MS.gene97656 | 0.842973 | 1.86E-58 | -1.69E-46 |
| MS.gene060762 | MS.gene97656 | 0.875491 | 2.96E-68 | -1.69E-46 |
| MS.gene060778 | MS.gene97656 | 0.917805 | 3.39E-86 | -1.69E-46 |
| MS.gene06077 | MS.gene97656 | 0.890545 | 8.94E-74 | -1.69E-46 |
| MS.gene060835 | MS.gene97656 | 0.861098 | 1.30E-63 | -1.69E-46 |
| MS.gene06092 | MS.gene97656 | 0.841432 | 4.77E-58 | -1.69E-46 |
| MS.gene06097 | MS.gene97656 | 0.869122 | 3.92E-66 | -1.69E-46 |
| MS.gene060982 | MS.gene97656 | 0.926325 | 5.48E-91 | -1.69E-46 |
| MS.gene061044 | MS.gene97656 | -0.829638 | 4.60E-55 | -1.69E-46 |
| MS.gene061150 | MS.gene97656 | 0.816633 | 5.00E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97656.t1 | MTR_4g053420 | 97.638 | 381 | 9 | 0 | 1 | 381 | 1 | 381 | 0.0 | 781 |
| MS.gene97656.t1 | MTR_4g056100 | 74.406 | 379 | 94 | 2 | 3 | 378 | 8 | 386 | 0.0 | 611 |
| MS.gene97656.t1 | MTR_1g107455 | 74.114 | 367 | 92 | 2 | 3 | 366 | 8 | 374 | 0.0 | 588 |
| MS.gene97656.t1 | MTR_1g108530 | 69.474 | 380 | 95 | 3 | 3 | 379 | 8 | 369 | 0.0 | 551 |
| MS.gene97656.t1 | MTR_4g056100 | 77.815 | 302 | 64 | 2 | 3 | 301 | 8 | 309 | 0.0 | 513 |
| MS.gene97656.t1 | MTR_4g056100 | 77.778 | 270 | 57 | 2 | 3 | 269 | 8 | 277 | 1.20e-162 | 457 |
| MS.gene97656.t1 | MTR_2g041340 | 61.633 | 245 | 67 | 3 | 3 | 244 | 8 | 228 | 4.15e-103 | 304 |
| MS.gene97656.t1 | MTR_2g096660 | 28.902 | 346 | 195 | 11 | 14 | 357 | 38 | 334 | 9.32e-31 | 120 |
| MS.gene97656.t1 | MTR_4g045737 | 56.989 | 93 | 39 | 1 | 3 | 94 | 8 | 100 | 8.62e-30 | 111 |
| MS.gene97656.t1 | MTR_4g063600 | 27.457 | 346 | 197 | 12 | 14 | 357 | 32 | 325 | 1.30e-26 | 108 |
| MS.gene97656.t1 | MTR_1g088480 | 25.862 | 348 | 197 | 14 | 14 | 357 | 118 | 408 | 3.40e-23 | 100 |
| MS.gene97656.t1 | MTR_4g120030 | 24.638 | 345 | 201 | 11 | 16 | 357 | 113 | 401 | 6.61e-22 | 97.1 |
| MS.gene97656.t1 | MTR_1g067530 | 23.421 | 380 | 203 | 15 | 14 | 357 | 112 | 439 | 1.06e-16 | 81.6 |
| MS.gene97656.t1 | MTR_4g045693 | 55.556 | 54 | 24 | 0 | 3 | 56 | 7 | 60 | 6.31e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97656.t1 | AT1G08200 | 75.000 | 380 | 92 | 2 | 2 | 378 | 6 | 385 | 0.0 | 615 |
| MS.gene97656.t1 | AT2G27860 | 73.947 | 380 | 96 | 2 | 2 | 378 | 6 | 385 | 0.0 | 606 |
| MS.gene97656.t1 | AT3G46440 | 28.035 | 346 | 198 | 11 | 14 | 357 | 29 | 325 | 7.17e-29 | 115 |
| MS.gene97656.t1 | AT3G46440 | 28.035 | 346 | 198 | 11 | 14 | 357 | 29 | 325 | 7.17e-29 | 115 |
| MS.gene97656.t1 | AT5G59290 | 27.457 | 346 | 200 | 11 | 14 | 357 | 1 | 297 | 2.08e-28 | 113 |
| MS.gene97656.t1 | AT5G59290 | 27.457 | 346 | 200 | 11 | 14 | 357 | 30 | 326 | 4.47e-28 | 113 |
| MS.gene97656.t1 | AT5G59290 | 27.507 | 349 | 202 | 11 | 11 | 357 | 20 | 319 | 6.25e-28 | 112 |
| MS.gene97656.t1 | AT5G59290 | 28.613 | 346 | 196 | 13 | 14 | 357 | 45 | 341 | 7.70e-28 | 112 |
| MS.gene97656.t1 | AT2G28760 | 28.035 | 346 | 198 | 12 | 14 | 357 | 31 | 327 | 1.40e-27 | 111 |
| MS.gene97656.t1 | AT2G28760 | 28.035 | 346 | 198 | 12 | 14 | 357 | 31 | 327 | 1.40e-27 | 111 |
| MS.gene97656.t1 | AT2G28760 | 28.035 | 346 | 198 | 12 | 14 | 357 | 31 | 327 | 1.40e-27 | 111 |
| MS.gene97656.t1 | AT3G53520 | 28.286 | 350 | 191 | 15 | 14 | 357 | 120 | 415 | 2.69e-27 | 112 |
| MS.gene97656.t1 | AT2G28760 | 28.613 | 346 | 196 | 13 | 14 | 357 | 62 | 358 | 3.59e-27 | 111 |
| MS.gene97656.t1 | AT3G53520 | 28.857 | 350 | 187 | 16 | 14 | 357 | 120 | 413 | 3.70e-25 | 106 |
| MS.gene97656.t1 | AT2G47650 | 26.648 | 349 | 204 | 15 | 14 | 357 | 121 | 422 | 1.73e-24 | 104 |
| MS.gene97656.t1 | AT3G62830 | 26.648 | 349 | 198 | 14 | 14 | 357 | 119 | 414 | 2.73e-24 | 103 |
| MS.gene97656.t1 | AT3G62830 | 26.648 | 349 | 198 | 14 | 14 | 357 | 119 | 414 | 2.73e-24 | 103 |
| MS.gene97656.t1 | AT2G47650 | 26.074 | 349 | 200 | 14 | 14 | 357 | 121 | 416 | 8.85e-24 | 102 |
| MS.gene97656.t1 | AT3G53520 | 27.451 | 255 | 146 | 11 | 14 | 264 | 120 | 339 | 1.00e-15 | 78.2 |
Find 86 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTGTCCATTTGCTCTATC+AGG | 0.212687 | 4.4:+48985581 | None:intergenic |
| TTAACAGATACTTCATTATC+TGG | 0.251368 | 4.4:+48985542 | None:intergenic |
| TTTCTACCTGTGAGGTCTTT+GGG | 0.299135 | 4.4:-48986737 | MS.gene97656:CDS |
| ATGACAGACAGGCTCATTTA+TGG | 0.300625 | 4.4:-48986316 | MS.gene97656:intron |
| CTATTGTGAGACCTTATAAC+TGG | 0.307051 | 4.4:-48986012 | MS.gene97656:CDS |
| GCTAGCTGAGCTGATGATAA+AGG | 0.338715 | 4.4:-48985516 | MS.gene97656:intron |
| AGTTCATCAAGAGATGTCTT+TGG | 0.360698 | 4.4:+48985034 | None:intergenic |
| TGATATAGAGAAAGGTTCTC+TGG | 0.371467 | 4.4:+48985717 | None:intergenic |
| CTTGGTCCAATCCAGTTATA+AGG | 0.372591 | 4.4:+48986001 | None:intergenic |
| CCAGGAATGAAGTCCATTCT+TGG | 0.373462 | 4.4:+48985983 | None:intergenic |
| TATGGCTTTGTGAGATGTTT+CGG | 0.384939 | 4.4:+48987231 | None:intergenic |
| AATCAAACGCTTATTGTTCT+CGG | 0.398704 | 4.4:+48986764 | None:intergenic |
| GCGTGATTGGTTTCCCGTCC+AGG | 0.404306 | 4.4:+48987320 | None:intergenic |
| CTGAAACAAGCTAAAACTCT+TGG | 0.409574 | 4.4:+48985935 | None:intergenic |
| CATATTGAGATCGGCGTGAT+TGG | 0.409720 | 4.4:+48987307 | None:intergenic |
| CCAAGAATGGACTTCATTCC+TGG | 0.411557 | 4.4:-48985983 | MS.gene97656:CDS |
| GACCATCTCTGTTTATGAAC+TGG | 0.420386 | 4.4:+48986358 | None:intergenic |
| TCCTTGATAAGTCTCATCCT+TGG | 0.421329 | 4.4:-48987174 | MS.gene97656:CDS |
| GGATTATAACACGCGGCCTT+TGG | 0.424145 | 4.4:-48986940 | MS.gene97656:CDS |
| TGCATCTTTGATATAGAGAA+AGG | 0.428990 | 4.4:+48985709 | None:intergenic |
| GACATCTCTTGATGAACTGT+TGG | 0.432077 | 4.4:-48985029 | MS.gene97656:CDS |
| AGAGGAGACATCAATGACTA+TGG | 0.439801 | 4.4:+48987213 | None:intergenic |
| CTGGTGATGATTGTCATGTC+AGG | 0.448491 | 4.4:+48985300 | None:intergenic |
| AAGCTTTGACGAGAGTTTCA+AGG | 0.460030 | 4.4:+48987104 | None:intergenic |
| TCTTTGAGCTTGTAATATTG+AGG | 0.462050 | 4.4:+48986406 | None:intergenic |
| CCTTGATAAGTCTCATCCTT+GGG | 0.467401 | 4.4:-48987173 | MS.gene97656:CDS |
| GTGAGACCTTATAACTGGAT+TGG | 0.470330 | 4.4:-48986007 | MS.gene97656:CDS |
| ATAGCTGAGCATGCGGAGAA+TGG | 0.470908 | 4.4:-48986046 | MS.gene97656:intron |
| TAACTGGATTGGACCAAGAA+TGG | 0.477010 | 4.4:-48985996 | MS.gene97656:CDS |
| GATAACCCTGATAGAGCAAA+TGG | 0.482209 | 4.4:-48985587 | MS.gene97656:CDS |
| TAACAGATACTTCATTATCT+GGG | 0.496503 | 4.4:+48985543 | None:intergenic |
| TGTACCTTTCTATACTCCTC+AGG | 0.497124 | 4.4:+48986693 | None:intergenic |
| ATGTCTGATGTTGATATTGA+AGG | 0.498197 | 4.4:+48984999 | None:intergenic |
| TGAAACAAGCTAAAACTCTT+GGG | 0.503701 | 4.4:+48985936 | None:intergenic |
| GACTTCATTCCTGGTGTGGA+TGG | 0.515549 | 4.4:-48985974 | MS.gene97656:CDS |
| CGACAAAATACCAAGCTGCC+TGG | 0.520100 | 4.4:+48985281 | None:intergenic |
| TAATTTCATCGATGCGATCC+CGG | 0.523625 | 4.4:-48986904 | MS.gene97656:CDS |
| ATATGCATGATCGGCGGTGG+AGG | 0.526513 | 4.4:-48987289 | MS.gene97656:CDS |
| TCAATATGCATGATCGGCGG+TGG | 0.527392 | 4.4:-48987292 | MS.gene97656:CDS |
| TGGATCGAGTGAACCTGGAC+GGG | 0.529219 | 4.4:-48987333 | MS.gene97656:CDS |
| AAGGTTATGATGACAGTGAT+AGG | 0.529228 | 4.4:-48985329 | MS.gene97656:CDS |
| TTTCATGGATCGAGTGAACC+TGG | 0.529328 | 4.4:-48987338 | None:intergenic |
| GAGGTCTTTGGGAAGACTAT+AGG | 0.530894 | 4.4:-48986726 | MS.gene97656:CDS |
| TGCCTCTAGTCTATCAACTC+TGG | 0.531156 | 4.4:-48985379 | MS.gene97656:CDS |
| ACTCTTGGGACACCATCACT+TGG | 0.533733 | 4.4:+48985950 | None:intergenic |
| CCCAAGGATGAGACTTATCA+AGG | 0.539968 | 4.4:+48987173 | None:intergenic |
| CTATATCAAAGATGCAATTG+AGG | 0.540832 | 4.4:-48985702 | MS.gene97656:CDS |
| ACAATCATCACCAGGCAGCT+TGG | 0.544555 | 4.4:-48985291 | MS.gene97656:intron |
| GAGCCGCTCAAACTTGTTGA+TGG | 0.544603 | 4.4:-48985749 | MS.gene97656:CDS |
| TGTGTCCATTTGCTCTATCA+GGG | 0.545363 | 4.4:+48985582 | None:intergenic |
| AAATGGACACATCTTTAATG+TGG | 0.547790 | 4.4:-48985570 | MS.gene97656:CDS |
| GATATAGAGAAAGGTTCTCT+GGG | 0.550685 | 4.4:+48985718 | None:intergenic |
| TTTCATTAAGGTATATGCAA+AGG | 0.553205 | 4.4:-48985415 | MS.gene97656:intron |
| CATTAAGGTATATGCAAAGG+TGG | 0.554916 | 4.4:-48985412 | MS.gene97656:intron |
| GTGCAAAGCAGATGACAGAC+AGG | 0.570500 | 4.4:-48986327 | MS.gene97656:CDS |
| TCTTGCTGCGATTTGCACAC+CGG | 0.572344 | 4.4:-48986964 | MS.gene97656:CDS |
| GGTGTGGATGGTCCAAGTGA+TGG | 0.573258 | 4.4:-48985962 | MS.gene97656:CDS |
| CCGATCTCAATATGCATGAT+CGG | 0.574639 | 4.4:-48987298 | MS.gene97656:CDS |
| GTCCAGTTCATAAACAGAGA+TGG | 0.576229 | 4.4:-48986360 | MS.gene97656:CDS |
| AGAGTTGATAGACTAGAGGC+AGG | 0.577132 | 4.4:+48985381 | None:intergenic |
| CCGATCATGCATATTGAGAT+CGG | 0.578859 | 4.4:+48987298 | None:intergenic |
| TCTGCCTGAGGAGTATAGAA+AGG | 0.581092 | 4.4:-48986697 | MS.gene97656:intron |
| AGTCTTCCCAAAGACCTCAC+AGG | 0.585441 | 4.4:+48986731 | None:intergenic |
| TCATCTGATGAAACTCAATA+CGG | 0.586794 | 4.4:+48987146 | None:intergenic |
| ATGGATCGAGTGAACCTGGA+CGG | 0.589210 | 4.4:-48987334 | MS.gene97656:CDS |
| AATGGACACATCTTTAATGT+GGG | 0.590992 | 4.4:-48985569 | MS.gene97656:CDS |
| ATCGGCGGTGGAGGATTCAT+CGG | 0.591414 | 4.4:-48987280 | MS.gene97656:CDS |
| CCGCTCAAACTTGTTGATGG+TGG | 0.594336 | 4.4:-48985746 | MS.gene97656:CDS |
| TCACTTGGACCATCCACACC+AGG | 0.596283 | 4.4:+48985965 | None:intergenic |
| TGCTGCGATTTGCACACCGG+CGG | 0.613907 | 4.4:-48986961 | MS.gene97656:CDS |
| TATAGGTAGCTTTCTGCCTG+AGG | 0.613942 | 4.4:-48986709 | MS.gene97656:CDS |
| CTGACATGACAATCATCACC+AGG | 0.624329 | 4.4:-48985299 | MS.gene97656:CDS |
| TGTCTGATGTTGATATTGAA+GGG | 0.635641 | 4.4:+48985000 | None:intergenic |
| GGCCGCGTGTTATAATCCGC+CGG | 0.636617 | 4.4:+48986945 | None:intergenic |
| ATCCAGAGTTGATAGACTAG+AGG | 0.637210 | 4.4:+48985377 | None:intergenic |
| AACTCAATACGGTTAGCCCA+AGG | 0.640625 | 4.4:+48987157 | None:intergenic |
| TAAATCTATAGCTGAGCATG+CGG | 0.640819 | 4.4:-48986053 | MS.gene97656:intron |
| TGGTGATGATTGTCATGTCA+GGG | 0.642852 | 4.4:+48985301 | None:intergenic |
| TTACTGTAAATAGTATCCAA+AGG | 0.643272 | 4.4:+48986924 | None:intergenic |
| AATGGACTTCATTCCTGGTG+TGG | 0.645922 | 4.4:-48985978 | MS.gene97656:CDS |
| GTTTGAGCGGCTCGCCACGT+AGG | 0.652052 | 4.4:+48985759 | None:intergenic |
| CACCGGCGGATTATAACACG+CGG | 0.659834 | 4.4:-48986947 | MS.gene97656:CDS |
| CCACCATCAACAAGTTTGAG+CGG | 0.662331 | 4.4:+48985746 | None:intergenic |
| TTTCATCGATGCGATCCCGG+TGG | 0.691567 | 4.4:-48986901 | MS.gene97656:intron |
| ATCTCAATATGCATGATCGG+CGG | 0.695000 | 4.4:-48987295 | MS.gene97656:CDS |
| TTGCTCTAGAATCTCCTACG+TGG | 0.751937 | 4.4:-48985773 | MS.gene97656:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATCAAAAATATATAAAAA+TGG | + | chr4.4:48985280-48985299 | None:intergenic | 10.0% |
| !!! | AGAATTTTTAAAACATAAGA+TGG | - | chr4.4:48985654-48985673 | MS.gene97656:intron | 15.0% |
| !!! | TTGAATGTAATCATATTTTT+CGG | - | chr4.4:48985728-48985747 | MS.gene97656:CDS | 15.0% |
| !! | AAAATTAAAAAACTTACCAC+CGG | + | chr4.4:48985407-48985426 | None:intergenic | 20.0% |
| !! | CACAAAGTTAAATATATCTT+TGG | + | chr4.4:48985788-48985807 | None:intergenic | 20.0% |
| !!! | ATTTTTGATGATGTTGTTTT+TGG | - | chr4.4:48985289-48985308 | MS.gene97656:intron | 20.0% |
| !!! | CTCATTTTGTTTTTTCATTA+AGG | - | chr4.4:48986862-48986881 | MS.gene97656:intron | 20.0% |
| !!! | TTATTTCTCTTGAAAAACAA+AGG | + | chr4.4:48986832-48986851 | None:intergenic | 20.0% |
| !!! | TTCTAAATTAGTCTTTACAT+AGG | - | chr4.4:48986800-48986819 | MS.gene97656:intron | 20.0% |
| ! | AAATTAAAAAACTTACCACC+GGG | + | chr4.4:48985406-48985425 | None:intergenic | 25.0% |
| ! | TAACAGATACTTCATTATCT+GGG | + | chr4.4:48986749-48986768 | None:intergenic | 25.0% |
| ! | TACAGCAATAATCTCTTTAT+GGG | - | chr4.4:48985615-48985634 | MS.gene97656:intron | 25.0% |
| ! | TATGCTATCATTTAACATGT+AGG | - | chr4.4:48986680-48986699 | MS.gene97656:intron | 25.0% |
| ! | TCAAGAGAAATAAACAACTT+TGG | - | chr4.4:48986839-48986858 | MS.gene97656:intron | 25.0% |
| ! | TTAACAGATACTTCATTATC+TGG | + | chr4.4:48986750-48986769 | None:intergenic | 25.0% |
| ! | TTACTGTAAATAGTATCCAA+AGG | + | chr4.4:48985368-48985387 | None:intergenic | 25.0% |
| ! | TTATAATGAGTTGTGATTGA+TGG | - | chr4.4:48985474-48985493 | MS.gene97656:intron | 25.0% |
| ! | TTTCATTAAGGTATATGCAA+AGG | - | chr4.4:48986874-48986893 | MS.gene97656:intron | 25.0% |
| !! | CAATGCTTTTAACAAAATCA+CGG | + | chr4.4:48987097-48987116 | None:intergenic | 25.0% |
| !! | TTTTGTATCTATGCATTGTT+TGG | - | chr4.4:48987038-48987057 | MS.gene97656:intron | 25.0% |
| AAAAAGAAAGAAACAGAAGC+AGG | + | chr4.4:48986397-48986416 | None:intergenic | 30.0% | |
| AAATGGACACATCTTTAATG+TGG | - | chr4.4:48986719-48986738 | MS.gene97656:CDS | 30.0% | |
| AATCAAACGCTTATTGTTCT+CGG | + | chr4.4:48985528-48985547 | None:intergenic | 30.0% | |
| AATGGACACATCTTTAATGT+GGG | - | chr4.4:48986720-48986739 | MS.gene97656:CDS | 30.0% | |
| ATGTCTGATGTTGATATTGA+AGG | + | chr4.4:48987293-48987312 | None:intergenic | 30.0% | |
| CTATATCAAAGATGCAATTG+AGG | - | chr4.4:48986587-48986606 | MS.gene97656:intron | 30.0% | |
| CTGTTTATTCATGTGAGTTT+AGG | - | chr4.4:48987225-48987244 | MS.gene97656:CDS | 30.0% | |
| GATTCTATCAAACTCATTGT+CGG | - | chr4.4:48987154-48987173 | MS.gene97656:CDS | 30.0% | |
| GTACAGCAATAATCTCTTTA+TGG | - | chr4.4:48985614-48985633 | MS.gene97656:intron | 30.0% | |
| TCAAGAGTAAGTTAAGCAAA+AGG | + | chr4.4:48986210-48986229 | None:intergenic | 30.0% | |
| TCATCTGATGAAACTCAATA+CGG | + | chr4.4:48985146-48985165 | None:intergenic | 30.0% | |
| TCTTTGAGCTTGTAATATTG+AGG | + | chr4.4:48985886-48985905 | None:intergenic | 30.0% | |
| TGAAACAAGCTAAAACTCTT+GGG | + | chr4.4:48986356-48986375 | None:intergenic | 30.0% | |
| TGCATCTTTGATATAGAGAA+AGG | + | chr4.4:48986583-48986602 | None:intergenic | 30.0% | |
| TGTCTGATGTTGATATTGAA+GGG | + | chr4.4:48987292-48987311 | None:intergenic | 30.0% | |
| TTATTCATGTGAGTTTAGGT+TGG | - | chr4.4:48987229-48987248 | MS.gene97656:CDS | 30.0% | |
| !!! | TATTTTCTTAACTTGTGTCG+AGG | + | chr4.4:48986082-48986101 | None:intergenic | 30.0% |
| AAGACAAATTTGCATCATGC+AGG | - | chr4.4:48985858-48985877 | MS.gene97656:intron | 35.0% | |
| AAGGTTATGATGACAGTGAT+AGG | - | chr4.4:48986960-48986979 | MS.gene97656:CDS | 35.0% | |
| ACGTGAGTTTGAAGAAATCA+CGG | - | chr4.4:48987066-48987085 | MS.gene97656:intron | 35.0% | |
| AGTTCATCAAGAGATGTCTT+TGG | + | chr4.4:48987258-48987277 | None:intergenic | 35.0% | |
| CATTAAGGTATATGCAAAGG+TGG | - | chr4.4:48986877-48986896 | MS.gene97656:intron | 35.0% | |
| CGATATTGACACGTAGATAA+TGG | - | chr4.4:48985680-48985699 | MS.gene97656:intron | 35.0% | |
| CTATTGTGAGACCTTATAAC+TGG | - | chr4.4:48986277-48986296 | MS.gene97656:intron | 35.0% | |
| CTGAAACAAGCTAAAACTCT+TGG | + | chr4.4:48986357-48986376 | None:intergenic | 35.0% | |
| GATATAGAGAAAGGTTCTCT+GGG | + | chr4.4:48986574-48986593 | None:intergenic | 35.0% | |
| GGCTCATTTATGGTAAACAA+AGG | - | chr4.4:48985983-48986002 | MS.gene97656:CDS | 35.0% | |
| TAAATCTATAGCTGAGCATG+CGG | - | chr4.4:48986236-48986255 | MS.gene97656:intron | 35.0% | |
| TGAACTGGACCAAAAATACA+AGG | + | chr4.4:48985919-48985938 | None:intergenic | 35.0% | |
| TGATATAGAGAAAGGTTCTC+TGG | + | chr4.4:48986575-48986594 | None:intergenic | 35.0% | |
| ! | GAAGCTTTGTGAAAAAACAG+TGG | + | chr4.4:48986496-48986515 | None:intergenic | 35.0% |
| ! | GATGTGAGTCCTTGTATTTT+TGG | - | chr4.4:48985907-48985926 | MS.gene97656:intron | 35.0% |
| ! | GTGAGTTCAGAAGTTTTCTA+TGG | - | chr4.4:48986935-48986954 | MS.gene97656:CDS | 35.0% |
| ! | TCAGAAGTTTTCTATGGCAA+AGG | - | chr4.4:48986941-48986960 | MS.gene97656:CDS | 35.0% |
| !! | CATATTTTTCGGCATCATGA+TGG | - | chr4.4:48985739-48985758 | MS.gene97656:CDS | 35.0% |
| !! | GAGATGATTGATTTTCTCAG+AGG | + | chr4.4:48985097-48985116 | None:intergenic | 35.0% |
| !! | GATTCATTTTTCTACCTGTG+AGG | - | chr4.4:48985544-48985563 | MS.gene97656:CDS | 35.0% |
| !! | TATGGCTTTGTGAGATGTTT+CGG | + | chr4.4:48985061-48985080 | None:intergenic | 35.0% |
| AGAGGAGACATCAATGACTA+TGG | + | chr4.4:48985079-48985098 | None:intergenic | 40.0% | |
| ATCTCAATATGCATGATCGG+CGG | - | chr4.4:48984994-48985013 | MS.gene97656:CDS | 40.0% | |
| ATGACAGACAGGCTCATTTA+TGG | - | chr4.4:48985973-48985992 | MS.gene97656:CDS | 40.0% | |
| ATGGTTTCAATCTGACGTGT+AGG | - | chr4.4:48986143-48986162 | MS.gene97656:intron | 40.0% | |
| ATGTGTCCATTTGCTCTATC+AGG | + | chr4.4:48986711-48986730 | None:intergenic | 40.0% | |
| CCGATCATGCATATTGAGAT+CGG | + | chr4.4:48984994-48985013 | None:intergenic | 40.0% | |
| CCGATCTCAATATGCATGAT+CGG | - | chr4.4:48984991-48985010 | MS.gene97656:CDS | 40.0% | |
| CCTTGATAAGTCTCATCCTT+GGG | - | chr4.4:48985116-48985135 | MS.gene97656:intron | 40.0% | |
| CGTCAGATTGAAACCATGTA+AGG | + | chr4.4:48986140-48986159 | None:intergenic | 40.0% | |
| CTTGGTCCAATCCAGTTATA+AGG | + | chr4.4:48986291-48986310 | None:intergenic | 40.0% | |
| GACATCTCTTGATGAACTGT+TGG | - | chr4.4:48987260-48987279 | MS.gene97656:CDS | 40.0% | |
| GACCATCTCTGTTTATGAAC+TGG | + | chr4.4:48985934-48985953 | None:intergenic | 40.0% | |
| GATAACCCTGATAGAGCAAA+TGG | - | chr4.4:48986702-48986721 | MS.gene97656:CDS | 40.0% | |
| GTCCAGTTCATAAACAGAGA+TGG | - | chr4.4:48985929-48985948 | MS.gene97656:intron | 40.0% | |
| GTGAGACCTTATAACTGGAT+TGG | - | chr4.4:48986282-48986301 | MS.gene97656:intron | 40.0% | |
| TAATTTCATCGATGCGATCC+CGG | - | chr4.4:48985385-48985404 | MS.gene97656:CDS | 40.0% | |
| TCAATGTCAGTATGTGTGTC+TGG | + | chr4.4:48986057-48986076 | None:intergenic | 40.0% | |
| TCCTTGATAAGTCTCATCCT+TGG | - | chr4.4:48985115-48985134 | MS.gene97656:intron | 40.0% | |
| TGTACCTTTCTATACTCCTC+AGG | + | chr4.4:48985599-48985618 | None:intergenic | 40.0% | |
| TGTGTCCATTTGCTCTATCA+GGG | + | chr4.4:48986710-48986729 | None:intergenic | 40.0% | |
| TTTCTACCTGTGAGGTCTTT+GGG | - | chr4.4:48985552-48985571 | MS.gene97656:CDS | 40.0% | |
| ! | AAGCTTTGACGAGAGTTTCA+AGG | + | chr4.4:48985188-48985207 | None:intergenic | 40.0% |
| ! | TAACTGGATTGGACCAAGAA+TGG | - | chr4.4:48986293-48986312 | MS.gene97656:intron | 40.0% |
| ! | TGGTGATGATTGTCATGTCA+GGG | + | chr4.4:48986991-48987010 | None:intergenic | 40.0% |
| ! | TGTTTCGGACATCAGCTTTT+CGG | + | chr4.4:48985046-48985065 | None:intergenic | 40.0% |
| ! | TTTTCTACCTGTGAGGTCTT+TGG | - | chr4.4:48985551-48985570 | MS.gene97656:CDS | 40.0% |
| !! | ATCCAGAGTTGATAGACTAG+AGG | + | chr4.4:48986915-48986934 | None:intergenic | 40.0% |
| !! | ATTTTTCGGCATCATGATGG+TGG | - | chr4.4:48985742-48985761 | MS.gene97656:CDS | 40.0% |
| CATATTGAGATCGGCGTGAT+TGG | + | chr4.4:48984985-48985004 | None:intergenic | 45.0% | |
| CCACCATCAACAAGTTTGAG+CGG | + | chr4.4:48986546-48986565 | None:intergenic | 45.0% | |
| CCAGGAATGAAGTCCATTCT+TGG | + | chr4.4:48986309-48986328 | None:intergenic | 45.0% | |
| CCCAAGGATGAGACTTATCA+AGG | + | chr4.4:48985119-48985138 | None:intergenic | 45.0% | |
| CTGACATGACAATCATCACC+AGG | - | chr4.4:48986990-48987009 | MS.gene97656:intron | 45.0% | |
| GCTAGCTGAGCTGATGATAA+AGG | - | chr4.4:48986773-48986792 | MS.gene97656:CDS | 45.0% | |
| TATAGGTAGCTTTCTGCCTG+AGG | - | chr4.4:48985580-48985599 | MS.gene97656:CDS | 45.0% | |
| TCAGTGTCAGACACCTTACA+TGG | - | chr4.4:48986124-48986143 | MS.gene97656:intron | 45.0% | |
| TGCCTCTAGTCTATCAACTC+TGG | - | chr4.4:48986910-48986929 | MS.gene97656:CDS | 45.0% | |
| ! | AACTCAATACGGTTAGCCCA+AGG | + | chr4.4:48985135-48985154 | None:intergenic | 45.0% |
| ! | AATGGACTTCATTCCTGGTG+TGG | - | chr4.4:48986311-48986330 | MS.gene97656:intron | 45.0% |
| ! | CCAAGAATGGACTTCATTCC+TGG | - | chr4.4:48986306-48986325 | MS.gene97656:intron | 45.0% |
| ! | CTGGTGATGATTGTCATGTC+AGG | + | chr4.4:48986992-48987011 | None:intergenic | 45.0% |
| ! | GAGGTCTTTGGGAAGACTAT+AGG | - | chr4.4:48985563-48985582 | MS.gene97656:CDS | 45.0% |
| ! | TCTGCCTGAGGAGTATAGAA+AGG | - | chr4.4:48985592-48985611 | MS.gene97656:intron | 45.0% |
| ! | TGGTGGACACGTACATTTGT+CGG | - | chr4.4:48985759-48985778 | MS.gene97656:CDS | 45.0% |
| !! | AGAGTTGATAGACTAGAGGC+AGG | + | chr4.4:48986911-48986930 | None:intergenic | 45.0% |
| !! | TTGCTCTAGAATCTCCTACG+TGG | - | chr4.4:48986516-48986535 | MS.gene97656:intron | 45.0% |
| ACAATCATCACCAGGCAGCT+TGG | - | chr4.4:48986998-48987017 | MS.gene97656:intron | 50.0% | |
| ACTCTTGGGACACCATCACT+TGG | + | chr4.4:48986342-48986361 | None:intergenic | 50.0% | |
| AGTCTTCCCAAAGACCTCAC+AGG | + | chr4.4:48985561-48985580 | None:intergenic | 50.0% | |
| ATAGCTGAGCATGCGGAGAA+TGG | - | chr4.4:48986243-48986262 | MS.gene97656:intron | 50.0% | |
| ATGGATCGAGTGAACCTGGA+CGG | - | chr4.4:48984955-48984974 | MS.gene97656:CDS | 50.0% | |
| CGACAAAATACCAAGCTGCC+TGG | + | chr4.4:48987011-48987030 | None:intergenic | 50.0% | |
| GACTTCATTCCTGGTGTGGA+TGG | - | chr4.4:48986315-48986334 | MS.gene97656:intron | 50.0% | |
| GGATTATAACACGCGGCCTT+TGG | - | chr4.4:48985349-48985368 | MS.gene97656:CDS | 50.0% | |
| GTGCAAAGCAGATGACAGAC+AGG | - | chr4.4:48985962-48985981 | MS.gene97656:CDS | 50.0% | |
| TCAATATGCATGATCGGCGG+TGG | - | chr4.4:48984997-48985016 | MS.gene97656:CDS | 50.0% | |
| TCTTGCTGCGATTTGCACAC+CGG | - | chr4.4:48985325-48985344 | MS.gene97656:CDS | 50.0% | |
| !! | CCGCTCAAACTTGTTGATGG+TGG | - | chr4.4:48986543-48986562 | MS.gene97656:intron | 50.0% |
| !! | GAGCCGCTCAAACTTGTTGA+TGG | - | chr4.4:48986540-48986559 | MS.gene97656:intron | 50.0% |
| ATATGCATGATCGGCGGTGG+AGG | - | chr4.4:48985000-48985019 | MS.gene97656:CDS | 55.0% | |
| ATCGGCGGTGGAGGATTCAT+CGG | - | chr4.4:48985009-48985028 | MS.gene97656:CDS | 55.0% | |
| GGTGTGGATGGTCCAAGTGA+TGG | - | chr4.4:48986327-48986346 | MS.gene97656:CDS | 55.0% | |
| TCACTTGGACCATCCACACC+AGG | + | chr4.4:48986327-48986346 | None:intergenic | 55.0% | |
| TGGATCGAGTGAACCTGGAC+GGG | - | chr4.4:48984956-48984975 | MS.gene97656:CDS | 55.0% | |
| TTTCATCGATGCGATCCCGG+TGG | - | chr4.4:48985388-48985407 | MS.gene97656:CDS | 55.0% | |
| ! | CGGACATCAGCTTTTCGGTG+AGG | + | chr4.4:48985041-48985060 | None:intergenic | 55.0% |
| !! | CACCGGCGGATTATAACACG+CGG | - | chr4.4:48985342-48985361 | MS.gene97656:CDS | 55.0% |
| GGCCGCGTGTTATAATCCGC+CGG | + | chr4.4:48985347-48985366 | None:intergenic | 60.0% | |
| TGCTGCGATTTGCACACCGG+CGG | - | chr4.4:48985328-48985347 | MS.gene97656:CDS | 60.0% | |
| !! | GCGTGATTGGTTTCCCGTCC+AGG | + | chr4.4:48984972-48984991 | None:intergenic | 60.0% |
| GTTTGAGCGGCTCGCCACGT+AGG | + | chr4.4:48986533-48986552 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 48984955 | 48987356 | 48984955 | ID=MS.gene97656 |
| chr4.4 | mRNA | 48984955 | 48987356 | 48984955 | ID=MS.gene97656.t1;Parent=MS.gene97656 |
| chr4.4 | exon | 48987096 | 48987356 | 48987096 | ID=MS.gene97656.t1.exon1;Parent=MS.gene97656.t1 |
| chr4.4 | CDS | 48987096 | 48987356 | 48987096 | ID=cds.MS.gene97656.t1;Parent=MS.gene97656.t1 |
| chr4.4 | exon | 48986902 | 48986994 | 48986902 | ID=MS.gene97656.t1.exon2;Parent=MS.gene97656.t1 |
| chr4.4 | CDS | 48986902 | 48986994 | 48986902 | ID=cds.MS.gene97656.t1;Parent=MS.gene97656.t1 |
| chr4.4 | exon | 48986698 | 48986799 | 48986698 | ID=MS.gene97656.t1.exon3;Parent=MS.gene97656.t1 |
| chr4.4 | CDS | 48986698 | 48986799 | 48986698 | ID=cds.MS.gene97656.t1;Parent=MS.gene97656.t1 |
| chr4.4 | exon | 48986317 | 48986431 | 48986317 | ID=MS.gene97656.t1.exon4;Parent=MS.gene97656.t1 |
| chr4.4 | CDS | 48986317 | 48986431 | 48986317 | ID=cds.MS.gene97656.t1;Parent=MS.gene97656.t1 |
| chr4.4 | exon | 48985931 | 48986064 | 48985931 | ID=MS.gene97656.t1.exon5;Parent=MS.gene97656.t1 |
| chr4.4 | CDS | 48985931 | 48986064 | 48985931 | ID=cds.MS.gene97656.t1;Parent=MS.gene97656.t1 |
| chr4.4 | exon | 48985685 | 48985786 | 48985685 | ID=MS.gene97656.t1.exon6;Parent=MS.gene97656.t1 |
| chr4.4 | CDS | 48985685 | 48985786 | 48985685 | ID=cds.MS.gene97656.t1;Parent=MS.gene97656.t1 |
| chr4.4 | exon | 48985517 | 48985609 | 48985517 | ID=MS.gene97656.t1.exon7;Parent=MS.gene97656.t1 |
| chr4.4 | CDS | 48985517 | 48985609 | 48985517 | ID=cds.MS.gene97656.t1;Parent=MS.gene97656.t1 |
| chr4.4 | exon | 48985292 | 48985427 | 48985292 | ID=MS.gene97656.t1.exon8;Parent=MS.gene97656.t1 |
| chr4.4 | CDS | 48985292 | 48985427 | 48985292 | ID=cds.MS.gene97656.t1;Parent=MS.gene97656.t1 |
| chr4.4 | exon | 48984955 | 48985064 | 48984955 | ID=MS.gene97656.t1.exon9;Parent=MS.gene97656.t1 |
| chr4.4 | CDS | 48984955 | 48985064 | 48984955 | ID=cds.MS.gene97656.t1;Parent=MS.gene97656.t1 |
| Gene Sequence |
| Protein sequence |
