Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81747.t1 | XP_013467987.2 | 90.4 | 335 | 32 | 0 | 1 | 335 | 1 | 335 | 3.80E-157 | 564.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81747.t1 | A0A396JQT2 | 90.4 | 335 | 32 | 0 | 1 | 335 | 1 | 335 | 2.7e-157 | 564.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene81747 | 0.804074 | 2.57E-49 | -1.69E-46 |
| MS.gene049171 | MS.gene81747 | 0.908745 | 1.22E-81 | -1.69E-46 |
| MS.gene049173 | MS.gene81747 | 0.818713 | 1.70E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene81747 | 0.814135 | 1.80E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene81747 | 0.874722 | 5.41E-68 | -1.69E-46 |
| MS.gene049232 | MS.gene81747 | 0.833124 | 6.38E-56 | -1.69E-46 |
| MS.gene049257 | MS.gene81747 | 0.808586 | 2.88E-50 | -1.69E-46 |
| MS.gene049281 | MS.gene81747 | -0.802222 | 6.22E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene81747 | 0.879226 | 1.48E-69 | -1.69E-46 |
| MS.gene049320 | MS.gene81747 | 0.856466 | 3.16E-62 | -1.69E-46 |
| MS.gene049609 | MS.gene81747 | 0.875318 | 3.39E-68 | -1.69E-46 |
| MS.gene049633 | MS.gene81747 | 0.878108 | 3.66E-69 | -1.69E-46 |
| MS.gene049805 | MS.gene81747 | 0.804849 | 1.77E-49 | -1.69E-46 |
| MS.gene049865 | MS.gene81747 | 0.841497 | 4.58E-58 | -1.69E-46 |
| MS.gene05010 | MS.gene81747 | 0.863275 | 2.80E-64 | -1.69E-46 |
| MS.gene050163 | MS.gene81747 | 0.821138 | 4.73E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene81747 | 0.819534 | 1.10E-52 | -1.69E-46 |
| MS.gene050170 | MS.gene81747 | 0.909237 | 7.11E-82 | -1.69E-46 |
| MS.gene050323 | MS.gene81747 | 0.87554 | 2.84E-68 | -1.69E-46 |
| MS.gene050333 | MS.gene81747 | 0.827259 | 1.73E-54 | -1.69E-46 |
| MS.gene050444 | MS.gene81747 | 0.805942 | 1.05E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene81747 | 0.90686 | 9.44E-81 | -1.69E-46 |
| MS.gene050502 | MS.gene81747 | 0.801333 | 9.46E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene81747 | 0.872279 | 3.59E-67 | -1.69E-46 |
| MS.gene050518 | MS.gene81747 | 0.84164 | 4.20E-58 | -1.69E-46 |
| MS.gene050538 | MS.gene81747 | 0.812201 | 4.78E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene81747 | 0.880927 | 3.67E-70 | -1.69E-46 |
| MS.gene050593 | MS.gene81747 | 0.82725 | 1.74E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene81747 | 0.868522 | 6.14E-66 | -1.69E-46 |
| MS.gene050675 | MS.gene81747 | 0.865977 | 3.99E-65 | -1.69E-46 |
| MS.gene050697 | MS.gene81747 | 0.805211 | 1.49E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene81747 | 0.893659 | 5.12E-75 | -1.69E-46 |
| MS.gene050747 | MS.gene81747 | 0.864413 | 1.24E-64 | -1.69E-46 |
| MS.gene050772 | MS.gene81747 | 0.870696 | 1.20E-66 | -1.69E-46 |
| MS.gene05080 | MS.gene81747 | 0.865945 | 4.09E-65 | -1.69E-46 |
| MS.gene05081 | MS.gene81747 | 0.862726 | 4.13E-64 | -1.69E-46 |
| MS.gene050868 | MS.gene81747 | 0.869452 | 3.06E-66 | -1.69E-46 |
| MS.gene050871 | MS.gene81747 | 0.86659 | 2.55E-65 | -1.69E-46 |
| MS.gene050876 | MS.gene81747 | 0.821325 | 4.29E-53 | -1.69E-46 |
| MS.gene050904 | MS.gene81747 | 0.875991 | 1.99E-68 | -1.69E-46 |
| MS.gene050950 | MS.gene81747 | 0.854615 | 1.09E-61 | -1.69E-46 |
| MS.gene050986 | MS.gene81747 | 0.862334 | 5.46E-64 | -1.69E-46 |
| MS.gene05100 | MS.gene81747 | 0.801851 | 7.41E-49 | -1.69E-46 |
| MS.gene051268 | MS.gene81747 | 0.831242 | 1.87E-55 | -1.69E-46 |
| MS.gene051317 | MS.gene81747 | 0.850672 | 1.46E-60 | -1.69E-46 |
| MS.gene051336 | MS.gene81747 | 0.812092 | 5.04E-51 | -1.69E-46 |
| MS.gene051364 | MS.gene81747 | -0.804789 | 1.83E-49 | -1.69E-46 |
| MS.gene051366 | MS.gene81747 | -0.802058 | 6.72E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene81747 | 0.842856 | 2.00E-58 | -1.69E-46 |
| MS.gene051666 | MS.gene81747 | 0.802395 | 5.73E-49 | -1.69E-46 |
| MS.gene051694 | MS.gene81747 | 0.802944 | 4.41E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene81747 | 0.801647 | 8.16E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene81747 | 0.869913 | 2.17E-66 | -1.69E-46 |
| MS.gene051858 | MS.gene81747 | 0.812585 | 3.94E-51 | -1.69E-46 |
| MS.gene051941 | MS.gene81747 | 0.833061 | 6.62E-56 | -1.69E-46 |
| MS.gene051949 | MS.gene81747 | 0.80842 | 3.12E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene81747 | 0.856931 | 2.30E-62 | -1.69E-46 |
| MS.gene052346 | MS.gene81747 | 0.824475 | 7.91E-54 | -1.69E-46 |
| MS.gene052482 | MS.gene81747 | 0.861389 | 1.06E-63 | -1.69E-46 |
| MS.gene052486 | MS.gene81747 | 0.870191 | 1.76E-66 | -1.69E-46 |
| MS.gene052501 | MS.gene81747 | 0.820901 | 5.37E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene81747 | 0.881977 | 1.53E-70 | -1.69E-46 |
| MS.gene052504 | MS.gene81747 | 0.838619 | 2.58E-57 | -1.69E-46 |
| MS.gene052506 | MS.gene81747 | 0.867028 | 1.85E-65 | -1.69E-46 |
| MS.gene052615 | MS.gene81747 | 0.843556 | 1.30E-58 | -1.69E-46 |
| MS.gene052820 | MS.gene81747 | 0.84127 | 5.26E-58 | -1.69E-46 |
| MS.gene052822 | MS.gene81747 | 0.871061 | 9.10E-67 | -1.69E-46 |
| MS.gene052823 | MS.gene81747 | 0.877064 | 8.48E-69 | -1.69E-46 |
| MS.gene052825 | MS.gene81747 | 0.879087 | 1.66E-69 | -1.69E-46 |
| MS.gene052870 | MS.gene81747 | 0.807689 | 4.47E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene81747 | 0.822512 | 2.28E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene81747 | 0.873285 | 1.66E-67 | -1.69E-46 |
| MS.gene052982 | MS.gene81747 | 0.806952 | 6.41E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene81747 | 0.886416 | 3.49E-72 | -1.69E-46 |
| MS.gene053207 | MS.gene81747 | 0.844602 | 6.83E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene81747 | 0.860493 | 1.99E-63 | -1.69E-46 |
| MS.gene053286 | MS.gene81747 | 0.862683 | 4.26E-64 | -1.69E-46 |
| MS.gene053436 | MS.gene81747 | 0.85556 | 5.81E-62 | -1.69E-46 |
| MS.gene053479 | MS.gene81747 | 0.882927 | 6.91E-71 | -1.69E-46 |
| MS.gene053480 | MS.gene81747 | 0.865563 | 5.39E-65 | -1.69E-46 |
| MS.gene053574 | MS.gene81747 | 0.848723 | 5.11E-60 | -1.69E-46 |
| MS.gene053626 | MS.gene81747 | 0.821179 | 4.63E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene81747 | 0.829798 | 4.21E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene81747 | 0.89701 | 2.13E-76 | -1.69E-46 |
| MS.gene053916 | MS.gene81747 | 0.814275 | 1.67E-51 | -1.69E-46 |
| MS.gene053997 | MS.gene81747 | 0.80871 | 2.71E-50 | -1.69E-46 |
| MS.gene054343 | MS.gene81747 | 0.812083 | 5.07E-51 | -1.69E-46 |
| MS.gene054344 | MS.gene81747 | 0.86354 | 2.31E-64 | -1.69E-46 |
| MS.gene054408 | MS.gene81747 | 0.831104 | 2.02E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene81747 | 0.851574 | 8.12E-61 | -1.69E-46 |
| MS.gene054600 | MS.gene81747 | 0.879811 | 9.18E-70 | -1.69E-46 |
| MS.gene054642 | MS.gene81747 | 0.834955 | 2.22E-56 | -1.69E-46 |
| MS.gene054706 | MS.gene81747 | -0.809068 | 2.27E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene81747 | 0.875602 | 2.71E-68 | -1.69E-46 |
| MS.gene054884 | MS.gene81747 | -0.817171 | 3.79E-52 | -1.69E-46 |
| MS.gene054927 | MS.gene81747 | 0.821672 | 3.57E-53 | -1.69E-46 |
| MS.gene05494 | MS.gene81747 | 0.821952 | 3.07E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene81747 | 0.878986 | 1.80E-69 | -1.69E-46 |
| MS.gene054959 | MS.gene81747 | -0.806058 | 9.89E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene81747 | 0.84519 | 4.74E-59 | -1.69E-46 |
| MS.gene055224 | MS.gene81747 | 0.836327 | 9.98E-57 | -1.69E-46 |
| MS.gene055289 | MS.gene81747 | 0.818059 | 2.39E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene81747 | 0.888951 | 3.74E-73 | -1.69E-46 |
| MS.gene055502 | MS.gene81747 | 0.875656 | 2.60E-68 | -1.69E-46 |
| MS.gene055577 | MS.gene81747 | 0.899689 | 1.55E-77 | -1.69E-46 |
| MS.gene055722 | MS.gene81747 | 0.827196 | 1.79E-54 | -1.69E-46 |
| MS.gene055748 | MS.gene81747 | 0.867465 | 1.34E-65 | -1.69E-46 |
| MS.gene055750 | MS.gene81747 | 0.867018 | 1.86E-65 | -1.69E-46 |
| MS.gene055751 | MS.gene81747 | 0.868749 | 5.18E-66 | -1.69E-46 |
| MS.gene055776 | MS.gene81747 | 0.827605 | 1.43E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene81747 | 0.895158 | 1.25E-75 | -1.69E-46 |
| MS.gene055941 | MS.gene81747 | 0.853069 | 3.05E-61 | -1.69E-46 |
| MS.gene056040 | MS.gene81747 | 0.80326 | 3.79E-49 | -1.69E-46 |
| MS.gene056046 | MS.gene81747 | 0.822775 | 1.98E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene81747 | 0.801525 | 8.64E-49 | -1.69E-46 |
| MS.gene056266 | MS.gene81747 | 0.818338 | 2.06E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene81747 | 0.806652 | 7.41E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene81747 | 0.81856 | 1.84E-52 | -1.69E-46 |
| MS.gene056409 | MS.gene81747 | 0.827653 | 1.39E-54 | -1.69E-46 |
| MS.gene056446 | MS.gene81747 | 0.803787 | 2.95E-49 | -1.69E-46 |
| MS.gene056450 | MS.gene81747 | 0.815553 | 8.72E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene81747 | 0.902973 | 5.60E-79 | -1.69E-46 |
| MS.gene056510 | MS.gene81747 | 0.868249 | 7.51E-66 | -1.69E-46 |
| MS.gene056610 | MS.gene81747 | 0.844311 | 8.18E-59 | -1.69E-46 |
| MS.gene056657 | MS.gene81747 | 0.858962 | 5.74E-63 | -1.69E-46 |
| MS.gene056692 | MS.gene81747 | 0.865849 | 4.38E-65 | -1.69E-46 |
| MS.gene056877 | MS.gene81747 | 0.857323 | 1.77E-62 | -1.69E-46 |
| MS.gene056878 | MS.gene81747 | 0.83528 | 1.84E-56 | -1.69E-46 |
| MS.gene056946 | MS.gene81747 | 0.819853 | 9.34E-53 | -1.69E-46 |
| MS.gene057019 | MS.gene81747 | 0.801196 | 1.01E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene81747 | 0.832348 | 9.95E-56 | -1.69E-46 |
| MS.gene057086 | MS.gene81747 | 0.808893 | 2.48E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene81747 | 0.823655 | 1.23E-53 | -1.69E-46 |
| MS.gene057332 | MS.gene81747 | 0.85088 | 1.28E-60 | -1.69E-46 |
| MS.gene057416 | MS.gene81747 | 0.831206 | 1.90E-55 | -1.69E-46 |
| MS.gene057658 | MS.gene81747 | 0.876206 | 1.68E-68 | -1.69E-46 |
| MS.gene057734 | MS.gene81747 | 0.809216 | 2.11E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene81747 | 0.879446 | 1.24E-69 | -1.69E-46 |
| MS.gene057856 | MS.gene81747 | 0.816957 | 4.23E-52 | -1.69E-46 |
| MS.gene057857 | MS.gene81747 | 0.82277 | 1.98E-53 | -1.69E-46 |
| MS.gene05787 | MS.gene81747 | 0.81376 | 2.17E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene81747 | 0.823904 | 1.08E-53 | -1.69E-46 |
| MS.gene058157 | MS.gene81747 | 0.812916 | 3.33E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene81747 | -0.854149 | 1.49E-61 | -1.69E-46 |
| MS.gene058338 | MS.gene81747 | 0.851712 | 7.42E-61 | -1.69E-46 |
| MS.gene05837 | MS.gene81747 | 0.87623 | 1.65E-68 | -1.69E-46 |
| MS.gene058382 | MS.gene81747 | -0.812236 | 4.69E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene81747 | 0.87559 | 2.73E-68 | -1.69E-46 |
| MS.gene058544 | MS.gene81747 | 0.859019 | 5.53E-63 | -1.69E-46 |
| MS.gene058723 | MS.gene81747 | 0.808361 | 3.22E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene81747 | 0.858076 | 1.06E-62 | -1.69E-46 |
| MS.gene058838 | MS.gene81747 | 0.906548 | 1.32E-80 | -1.69E-46 |
| MS.gene059022 | MS.gene81747 | 0.87934 | 1.35E-69 | -1.69E-46 |
| MS.gene059023 | MS.gene81747 | 0.912957 | 1.07E-83 | -1.69E-46 |
| MS.gene059103 | MS.gene81747 | -0.82781 | 1.27E-54 | -1.69E-46 |
| MS.gene05912 | MS.gene81747 | 0.80717 | 5.76E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene81747 | 0.804911 | 1.72E-49 | -1.69E-46 |
| MS.gene05914 | MS.gene81747 | 0.827591 | 1.44E-54 | -1.69E-46 |
| MS.gene059303 | MS.gene81747 | 0.824307 | 8.66E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene81747 | 0.810548 | 1.09E-50 | -1.69E-46 |
| MS.gene059480 | MS.gene81747 | -0.824553 | 7.59E-54 | -1.69E-46 |
| MS.gene059667 | MS.gene81747 | 0.86093 | 1.47E-63 | -1.69E-46 |
| MS.gene059677 | MS.gene81747 | 0.883947 | 2.91E-71 | -1.69E-46 |
| MS.gene059718 | MS.gene81747 | 0.878628 | 2.41E-69 | -1.69E-46 |
| MS.gene059756 | MS.gene81747 | 0.891256 | 4.69E-74 | -1.69E-46 |
| MS.gene059801 | MS.gene81747 | 0.858845 | 6.23E-63 | -1.69E-46 |
| MS.gene059837 | MS.gene81747 | 0.886422 | 3.47E-72 | -1.69E-46 |
| MS.gene059865 | MS.gene81747 | 0.856303 | 3.52E-62 | -1.69E-46 |
| MS.gene059902 | MS.gene81747 | 0.80456 | 2.04E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene81747 | 0.803579 | 3.26E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene81747 | 0.881094 | 3.19E-70 | -1.69E-46 |
| MS.gene06027 | MS.gene81747 | 0.845879 | 3.08E-59 | -1.69E-46 |
| MS.gene060482 | MS.gene81747 | 0.803083 | 4.13E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene81747 | -0.838453 | 2.85E-57 | -1.69E-46 |
| MS.gene060703 | MS.gene81747 | 0.854776 | 9.83E-62 | -1.69E-46 |
| MS.gene060762 | MS.gene81747 | 0.876955 | 9.25E-69 | -1.69E-46 |
| MS.gene060778 | MS.gene81747 | 0.853707 | 2.00E-61 | -1.69E-46 |
| MS.gene06077 | MS.gene81747 | 0.88835 | 6.38E-73 | -1.69E-46 |
| MS.gene060835 | MS.gene81747 | 0.842962 | 1.88E-58 | -1.69E-46 |
| MS.gene06092 | MS.gene81747 | 0.856131 | 3.96E-62 | -1.69E-46 |
| MS.gene06097 | MS.gene81747 | 0.801872 | 7.33E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene81747 | 0.899515 | 1.84E-77 | -1.69E-46 |
| MS.gene061044 | MS.gene81747 | -0.816544 | 5.24E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene81747 | 0.864796 | 9.39E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81747.t1 | MTR_1g059970 | 94.595 | 333 | 18 | 0 | 3 | 335 | 1 | 333 | 0.0 | 583 |
| MS.gene81747.t1 | MTR_1g059970 | 93.728 | 287 | 18 | 0 | 1 | 287 | 1 | 287 | 4.09e-175 | 487 |
| MS.gene81747.t1 | MTR_1g059970 | 42.000 | 100 | 56 | 2 | 235 | 333 | 117 | 215 | 1.40e-16 | 79.3 |
| MS.gene81747.t1 | MTR_3g005720 | 40.639 | 219 | 122 | 4 | 121 | 334 | 104 | 319 | 4.18e-49 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81747.t1 | AT5G03880 | 72.414 | 290 | 80 | 0 | 45 | 334 | 49 | 338 | 2.22e-161 | 454 |
| MS.gene81747.t1 | AT4G10000 | 42.254 | 213 | 115 | 3 | 127 | 334 | 119 | 328 | 1.35e-51 | 174 |
| MS.gene81747.t1 | AT4G10000 | 42.254 | 213 | 115 | 3 | 127 | 334 | 119 | 328 | 1.35e-51 | 174 |
Find 71 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAATGCAAATTCTGTTTC+TGG | 0.144741 | 1.3:+43482098 | None:intergenic |
| AGACGAAATAATTAAGTATT+TGG | 0.152096 | 1.3:-43478555 | MS.gene81747:CDS |
| CACCGAAGCCACTTAAATTA+TGG | 0.171419 | 1.3:-43477729 | MS.gene81747:CDS |
| CGAAAATTCGGGCCGTTTCT+TGG | 0.227164 | 1.3:+43478949 | None:intergenic |
| TAGAGAAATAGTTGCTGTTT+TGG | 0.248195 | 1.3:-43478998 | MS.gene81747:CDS |
| GACCATACCTTTCGACAAAA+TGG | 0.252507 | 1.3:+43479142 | None:intergenic |
| GACAAGACTCTTGAGATTCT+TGG | 0.268285 | 1.3:-43481958 | MS.gene81747:CDS |
| TGATATAGAATATTTCGTTT+TGG | 0.299080 | 1.3:+43477172 | None:intergenic |
| AAGTATTTGGTTGGAACATA+TGG | 0.302490 | 1.3:-43478542 | MS.gene81747:intron |
| TTGCTCTTTCGCTTTGCTAC+TGG | 0.307870 | 1.3:-43481922 | MS.gene81747:CDS |
| ACAACCTTCGCACGAAAATT+CGG | 0.315861 | 1.3:+43478937 | None:intergenic |
| TCAAATTCATATATCTCAAT+AGG | 0.320762 | 1.3:+43479325 | None:intergenic |
| TGGTTCACAGGTACCTTTCT+TGG | 0.324635 | 1.3:-43477031 | MS.gene81747:intron |
| TTTCTCAATTCTCAGTTCAT+AGG | 0.325348 | 1.3:-43482152 | MS.gene81747:CDS |
| GATCTTATAGCAAAGCGTTT+AGG | 0.329835 | 1.3:+43481982 | None:intergenic |
| ATAGCAAAGCGTTTAGGTTC+AGG | 0.338103 | 1.3:+43481988 | None:intergenic |
| AACATTTCTACACCAGTGTT+TGG | 0.342818 | 1.3:+43477003 | None:intergenic |
| TACATCGAAACGCCAGTGTT+TGG | 0.350374 | 1.3:+43478584 | None:intergenic |
| GAAAATTCGGGCCGTTTCTT+GGG | 0.373516 | 1.3:+43478950 | None:intergenic |
| AATATTCTATATCAGAAAAC+TGG | 0.378479 | 1.3:-43477163 | MS.gene81747:CDS |
| TCAGAAAACTGGACATTTCC+AGG | 0.380253 | 1.3:-43477152 | MS.gene81747:intron |
| TTCTTTCTCATTTGTTTCCA+AGG | 0.387801 | 1.3:-43480144 | MS.gene81747:CDS |
| TTTGTTCTGGAAAATGAAAC+AGG | 0.388136 | 1.3:+43482129 | None:intergenic |
| AGCTGAAAAGTATATTCATT+TGG | 0.394678 | 1.3:+43480110 | None:intergenic |
| ACATCGAAACGCCAGTGTTT+GGG | 0.395641 | 1.3:+43478585 | None:intergenic |
| ATTTGGTGGAATTTCATCCT+TGG | 0.404155 | 1.3:+43480127 | None:intergenic |
| ACCGAAGCCACTTAAATTAT+GGG | 0.408062 | 1.3:-43477728 | MS.gene81747:CDS |
| TATATCTCAATAGGCTTCTC+TGG | 0.412301 | 1.3:+43479334 | None:intergenic |
| ACGTGAAGTACTTGTGGAAT+TGG | 0.413589 | 1.3:-43477354 | MS.gene81747:CDS |
| GAAATAATTAAGTATTTGGT+TGG | 0.416181 | 1.3:-43478551 | MS.gene81747:CDS |
| GCCCATAATTTAAGTGGCTT+CGG | 0.419173 | 1.3:+43477727 | None:intergenic |
| CAACCTTCGCACGAAAATTC+GGG | 0.424868 | 1.3:+43478938 | None:intergenic |
| GGAGACAATCGTACCATGTA+AGG | 0.425348 | 1.3:+43478889 | None:intergenic |
| ATTCCTCTTACTTTATCGCT+TGG | 0.434103 | 1.3:-43478056 | MS.gene81747:CDS |
| CTAATGCAAATTCTGTTTCT+GGG | 0.441565 | 1.3:+43482099 | None:intergenic |
| GTAAAAGAAACATCAAAGAT+AGG | 0.441714 | 1.3:-43479364 | MS.gene81747:CDS |
| TCATATGCCCATAATTTAAG+TGG | 0.444995 | 1.3:+43477721 | None:intergenic |
| TTCTATCCTTGCCCAAGAAA+CGG | 0.451827 | 1.3:-43478961 | MS.gene81747:CDS |
| AATCCAAGCGATAAAGTAAG+AGG | 0.457533 | 1.3:+43478053 | None:intergenic |
| CGTGCGAAGGTTGTTGAGAT+GGG | 0.462625 | 1.3:-43478928 | MS.gene81747:CDS |
| ACTTAAATTATGGGCATATG+AGG | 0.464685 | 1.3:-43477719 | MS.gene81747:intron |
| TAGCAAAGCGTTTAGGTTCA+GGG | 0.474563 | 1.3:+43481989 | None:intergenic |
| TCGTGCGAAGGTTGTTGAGA+TGG | 0.480686 | 1.3:-43478929 | MS.gene81747:CDS |
| GTAATGGCCATGGCTGGAAC+AGG | 0.485302 | 1.3:-43482186 | MS.gene81747:CDS |
| GTGTTTGGATCTTCCAAGAA+AGG | 0.490977 | 1.3:+43477018 | None:intergenic |
| TTCGGGCCGTTTCTTGGGCA+AGG | 0.492960 | 1.3:+43478955 | None:intergenic |
| AGCAAAGCGTTTAGGTTCAG+GGG | 0.498149 | 1.3:+43481990 | None:intergenic |
| GGCTTCGGTGGTAACTTCGC+TGG | 0.508413 | 1.3:+43477742 | None:intergenic |
| AAGGTAGTAATGGCCATGGC+TGG | 0.509550 | 1.3:-43482192 | None:intergenic |
| AGTAGCAAAGCGAAAGAGCA+AGG | 0.520076 | 1.3:+43481924 | None:intergenic |
| TAAAACACAGTTCCCTTACA+TGG | 0.522576 | 1.3:-43478902 | MS.gene81747:intron |
| TGAAAAGTATATTCATTTGG+TGG | 0.527901 | 1.3:+43480113 | None:intergenic |
| AGATGTTTCTGTTTCTGACA+TGG | 0.537859 | 1.3:+43482074 | None:intergenic |
| TTGAGATATATGAATTTGAA+AGG | 0.542729 | 1.3:-43479321 | MS.gene81747:intron |
| CAGAGTTCCTGTTCCAGCCA+TGG | 0.548748 | 1.3:+43482179 | None:intergenic |
| AATCGTACGTGAAGTACTTG+TGG | 0.549531 | 1.3:-43477360 | MS.gene81747:CDS |
| CATAATTTAAGTGGCTTCGG+TGG | 0.555497 | 1.3:+43477730 | None:intergenic |
| AAGGATAGAAAAGAATATCA+AGG | 0.558191 | 1.3:+43478974 | None:intergenic |
| CAAAGCGAAAGAGCAAGGGA+AGG | 0.562207 | 1.3:+43481929 | None:intergenic |
| TTCCAAGGTAGTAATGGCCA+TGG | 0.566098 | 1.3:-43482196 | None:intergenic |
| TTTCATTGTAGTTGTGCTAG+GGG | 0.574387 | 1.3:-43477199 | MS.gene81747:intron |
| TGTTGATGATGAAGTTGAAG+TGG | 0.581369 | 1.3:+43482047 | None:intergenic |
| AAAGCGAAAGAGCAAGGGAA+GGG | 0.581925 | 1.3:+43481930 | None:intergenic |
| TATTAGGTTGACCCAAACAC+TGG | 0.591601 | 1.3:-43478596 | MS.gene81747:intron |
| GTAGCAAAGCGAAAGAGCAA+GGG | 0.611002 | 1.3:+43481925 | None:intergenic |
| TTCTTGGAAGATCCAAACAC+TGG | 0.612315 | 1.3:-43477015 | MS.gene81747:CDS |
| ACTTACTTGACAAGCAAATG+TGG | 0.620078 | 1.3:+43477326 | None:intergenic |
| TATGCTTGGTCGCATTACAA+AGG | 0.624227 | 1.3:-43477912 | MS.gene81747:intron |
| GAGACAATCGTACCATGTAA+GGG | 0.627149 | 1.3:+43478890 | None:intergenic |
| GCAAAGCGTTTAGGTTCAGG+GGG | 0.639513 | 1.3:+43481991 | None:intergenic |
| GCGAAGGTTGTTGAGATGGG+TGG | 0.681372 | 1.3:-43478925 | MS.gene81747:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATACATTAATTTCAATATT+TGG | - | chr1.3:43481293-43481312 | MS.gene81747:intron | 10.0% |
| !! | TATAACTTATAATCTAGTAA+TGG | + | chr1.3:43481501-43481520 | None:intergenic | 15.0% |
| !!! | AATAACAATTTTCTTGTATT+AGG | - | chr1.3:43480525-43480544 | MS.gene81747:intron | 15.0% |
| !!! | AGTTTCTTGTTATAATTTTT+TGG | - | chr1.3:43480299-43480318 | MS.gene81747:intron | 15.0% |
| !!! | GTTTCTTGTTATAATTTTTT+GGG | - | chr1.3:43480300-43480319 | MS.gene81747:intron | 15.0% |
| !! | AAAAATAAAATACAGAGGAA+AGG | + | chr1.3:43479692-43479711 | None:intergenic | 20.0% |
| !! | AAAATAAAATACAGAGGAAA+GGG | + | chr1.3:43479691-43479710 | None:intergenic | 20.0% |
| !! | AAATTAATGCAAAAACTATC+CGG | - | chr1.3:43480373-43480392 | MS.gene81747:intron | 20.0% |
| !! | AACTGAAAAATAAAATACAG+AGG | + | chr1.3:43479697-43479716 | None:intergenic | 20.0% |
| !! | AATATTAAATAACCATCACA+AGG | + | chr1.3:43480487-43480506 | None:intergenic | 20.0% |
| !! | AATATTCTATATCAGAAAAC+TGG | - | chr1.3:43481974-43481993 | MS.gene81747:CDS | 20.0% |
| !! | ACAAAAGATAAATATTGAGA+GGG | + | chr1.3:43479854-43479873 | None:intergenic | 20.0% |
| !! | ACTAAACTAAGAAATACATA+TGG | + | chr1.3:43481855-43481874 | None:intergenic | 20.0% |
| !! | AGACGAAATAATTAAGTATT+TGG | - | chr1.3:43480582-43480601 | MS.gene81747:intron | 20.0% |
| !! | ATGTGTATATTTGCATAAAA+TGG | + | chr1.3:43482024-43482043 | None:intergenic | 20.0% |
| !! | CTAGATTATAAGTTATAGAT+TGG | - | chr1.3:43481504-43481523 | MS.gene81747:intron | 20.0% |
| !! | GAAATAATTAAGTATTTGGT+TGG | - | chr1.3:43480586-43480605 | MS.gene81747:intron | 20.0% |
| !! | GCATATAAACTATATCAAAT+TGG | + | chr1.3:43478897-43478916 | None:intergenic | 20.0% |
| !! | GTAACAATTAAACAAAATTC+TGG | + | chr1.3:43477759-43477778 | None:intergenic | 20.0% |
| !! | GTGAAAATGTTAAACATTTA+AGG | - | chr1.3:43479503-43479522 | MS.gene81747:intron | 20.0% |
| !! | TACAAAAGATAAATATTGAG+AGG | + | chr1.3:43479855-43479874 | None:intergenic | 20.0% |
| !! | TAGATAACTCAAAAATAAGT+TGG | + | chr1.3:43478315-43478334 | None:intergenic | 20.0% |
| !! | TCAAATTCATATATCTCAAT+AGG | + | chr1.3:43479815-43479834 | None:intergenic | 20.0% |
| !! | TGTGATGGTTATTTAATATT+TGG | - | chr1.3:43480487-43480506 | MS.gene81747:intron | 20.0% |
| !! | TTGAGATATATGAATTTGAA+AGG | - | chr1.3:43479816-43479835 | MS.gene81747:intron | 20.0% |
| !!! | AAGTTTTATAAGCTCTATTT+AGG | - | chr1.3:43480747-43480766 | MS.gene81747:intron | 20.0% |
| !!! | ATGTTAATGGATGAATTATT+AGG | - | chr1.3:43479123-43479142 | MS.gene81747:intron | 20.0% |
| !!! | ATTAACATGTGTTAGATTTT+AGG | - | chr1.3:43480679-43480698 | MS.gene81747:intron | 20.0% |
| !!! | ATTTCTTAGTTTAGTCTTAT+TGG | - | chr1.3:43481860-43481879 | MS.gene81747:intron | 20.0% |
| !!! | GATATAGAATATTTCGTTTT+GGG | + | chr1.3:43481967-43481986 | None:intergenic | 20.0% |
| !!! | GTAATTTTACATTAACAGTA+TGG | - | chr1.3:43479872-43479891 | MS.gene81747:intron | 20.0% |
| !!! | TCATTGTTTTTGAAATTTCA+GGG | - | chr1.3:43481359-43481378 | MS.gene81747:intron | 20.0% |
| !!! | TGATATAGAATATTTCGTTT+TGG | + | chr1.3:43481968-43481987 | None:intergenic | 20.0% |
| !!! | TGTATATTTTCTTTCTTACA+TGG | + | chr1.3:43478224-43478243 | None:intergenic | 20.0% |
| !!! | TGTTAATGGATGAATTATTA+GGG | - | chr1.3:43479124-43479143 | MS.gene81747:intron | 20.0% |
| !!! | TTAAGAAATCTGTTTTGAAT+TGG | - | chr1.3:43478378-43478397 | MS.gene81747:intron | 20.0% |
| !!! | TTCATTGTTTTTGAAATTTC+AGG | - | chr1.3:43481358-43481377 | MS.gene81747:intron | 20.0% |
| !!! | TTTTTTTTTTTTGGGAAACT+TGG | + | chr1.3:43477989-43478008 | None:intergenic | 20.0% |
| ! | AAAAGATTCTGCTGAATTAT+TGG | - | chr1.3:43478424-43478443 | MS.gene81747:intron | 25.0% |
| ! | AACAATCAACAAAACAAAGT+TGG | - | chr1.3:43480275-43480294 | MS.gene81747:intron | 25.0% |
| ! | AAGGATAGAAAAGAATATCA+AGG | + | chr1.3:43480166-43480185 | None:intergenic | 25.0% |
| ! | AATGGAATCAATAAAATACC+TGG | + | chr1.3:43482006-43482025 | None:intergenic | 25.0% |
| ! | ACTTATAATCTAGTAATGGT+TGG | + | chr1.3:43481497-43481516 | None:intergenic | 25.0% |
| ! | ATCAATGATACGATTTATTC+AGG | - | chr1.3:43481738-43481757 | MS.gene81747:intron | 25.0% |
| ! | ATTACAAAGTGGTTATATCA+AGG | - | chr1.3:43481660-43481679 | MS.gene81747:intron | 25.0% |
| ! | CATACATGCATTTAACAAAA+AGG | + | chr1.3:43477357-43477376 | None:intergenic | 25.0% |
| ! | CTATTCCTTAATCTTCATAA+TGG | + | chr1.3:43479915-43479934 | None:intergenic | 25.0% |
| ! | GAAACAAACTGATATGTAAT+AGG | + | chr1.3:43479221-43479240 | None:intergenic | 25.0% |
| ! | GAATCCTAGTAATTTCATTT+GGG | + | chr1.3:43479461-43479480 | None:intergenic | 25.0% |
| ! | GATAATAAATACAGAAGTTG+CGG | + | chr1.3:43478543-43478562 | None:intergenic | 25.0% |
| ! | GATATGTAATAGGATGTAAT+AGG | + | chr1.3:43479211-43479230 | None:intergenic | 25.0% |
| ! | GATGTTAGTACTTATGTTAA+TGG | - | chr1.3:43479110-43479129 | MS.gene81747:intron | 25.0% |
| ! | GTAAAAGAAACATCAAAGAT+AGG | - | chr1.3:43479773-43479792 | MS.gene81747:intron | 25.0% |
| ! | TAAATGCATGTATGTTATGA+AGG | - | chr1.3:43477363-43477382 | MS.gene81747:CDS | 25.0% |
| ! | TACGGAAACAATATTATTTC+TGG | - | chr1.3:43478629-43478648 | MS.gene81747:intron | 25.0% |
| ! | TATGCAATAATGATCAATGA+GGG | + | chr1.3:43479067-43479086 | None:intergenic | 25.0% |
| ! | TCAATGATACGATTTATTCA+GGG | - | chr1.3:43481739-43481758 | MS.gene81747:intron | 25.0% |
| ! | TGAATCCTAGTAATTTCATT+TGG | + | chr1.3:43479462-43479481 | None:intergenic | 25.0% |
| ! | TGTAGAACAATTAGTTCATA+AGG | + | chr1.3:43478746-43478765 | None:intergenic | 25.0% |
| ! | TTAATCAAACAGCTAACTAA+AGG | + | chr1.3:43479326-43479345 | None:intergenic | 25.0% |
| ! | TTAATTCCAATGGTTAATTG+TGG | - | chr1.3:43482086-43482105 | MS.gene81747:CDS | 25.0% |
| ! | TTATGCAATAATGATCAATG+AGG | + | chr1.3:43479068-43479087 | None:intergenic | 25.0% |
| ! | TTCTTTAATAATGTTCTTCG+TGG | - | chr1.3:43479957-43479976 | MS.gene81747:intron | 25.0% |
| !! | AGCTGAAAAGTATATTCATT+TGG | + | chr1.3:43479030-43479049 | None:intergenic | 25.0% |
| !! | AGTATTTTACCACATACAAA+GGG | - | chr1.3:43480863-43480882 | MS.gene81747:intron | 25.0% |
| !! | AGTATTTTTCTCACAATGTA+TGG | + | chr1.3:43480937-43480956 | None:intergenic | 25.0% |
| !! | ATACTCAATTCTGAAAAGTA+TGG | + | chr1.3:43480848-43480867 | None:intergenic | 25.0% |
| !! | CAATGAGATTTAACTTACAA+AGG | - | chr1.3:43481320-43481339 | MS.gene81747:intron | 25.0% |
| !! | CCATTTTCATATCATATGAA+CGG | + | chr1.3:43478454-43478473 | None:intergenic | 25.0% |
| !! | GTTATATCAAGGCTTTTTAT+AGG | - | chr1.3:43481671-43481690 | MS.gene81747:intron | 25.0% |
| !! | GTTCAGGTAAATGTTTATTT+TGG | - | chr1.3:43478078-43478097 | MS.gene81747:intron | 25.0% |
| !! | TGAAAAGTATATTCATTTGG+TGG | + | chr1.3:43479027-43479046 | None:intergenic | 25.0% |
| !! | TTTATCGCTTGGATTTTTAA+CGG | - | chr1.3:43481092-43481111 | MS.gene81747:intron | 25.0% |
| !!! | AAATGTTTATTTTGGAGTGA+TGG | - | chr1.3:43478086-43478105 | MS.gene81747:intron | 25.0% |
| !!! | AGTAATTTCTAGAACCTATA+GGG | + | chr1.3:43480983-43481002 | None:intergenic | 25.0% |
| !!! | ATTAGTTTTTATCACCAGAA+AGG | - | chr1.3:43481136-43481155 | MS.gene81747:intron | 25.0% |
| !!! | GATTTTTTACATAGGTTCAA+TGG | - | chr1.3:43478150-43478169 | MS.gene81747:intron | 25.0% |
| !!! | GTTTAATATTTTGACTGTAC+AGG | - | chr1.3:43480115-43480134 | MS.gene81747:CDS | 25.0% |
| !!! | TTGTTTTGTTGATTGTTTTG+AGG | + | chr1.3:43480272-43480291 | None:intergenic | 25.0% |
| AAGATAAAGCATGGGATAAA+TGG | - | chr1.3:43478174-43478193 | MS.gene81747:intron | 30.0% | |
| AAGTATTTGGTTGGAACATA+TGG | - | chr1.3:43480595-43480614 | MS.gene81747:intron | 30.0% | |
| ACAGCACAAAGTGATTAAAA+TGG | + | chr1.3:43479485-43479504 | None:intergenic | 30.0% | |
| ACCTGTAATTGTTTGATCAA+AGG | - | chr1.3:43477656-43477675 | MS.gene81747:intron | 30.0% | |
| ACTTAAATTATGGGCATATG+AGG | - | chr1.3:43481418-43481437 | MS.gene81747:intron | 30.0% | |
| AGTTCCCAAATGAAATTACT+AGG | - | chr1.3:43479454-43479473 | MS.gene81747:intron | 30.0% | |
| ATGCACAAATTAATACTGAC+TGG | + | chr1.3:43477562-43477581 | None:intergenic | 30.0% | |
| ATGGATGATGTTAATTCCAA+TGG | - | chr1.3:43482076-43482095 | MS.gene81747:CDS | 30.0% | |
| ATGGATTCATAAACAACAAC+CGG | + | chr1.3:43480395-43480414 | None:intergenic | 30.0% | |
| ATTGTTTGATCAAAGGGATT+TGG | - | chr1.3:43477663-43477682 | MS.gene81747:intron | 30.0% | |
| ATTTGACATGCTTGAAAACA+TGG | - | chr1.3:43481570-43481589 | MS.gene81747:intron | 30.0% | |
| CCGTTCATATGATATGAAAA+TGG | - | chr1.3:43478451-43478470 | MS.gene81747:intron | 30.0% | |
| CCTGTAATTGTTTGATCAAA+GGG | - | chr1.3:43477657-43477676 | MS.gene81747:intron | 30.0% | |
| CTATTTAGGTGATATCTTCT+AGG | - | chr1.3:43480761-43480780 | MS.gene81747:intron | 30.0% | |
| GAATTCGTTCATTAAGCATT+AGG | + | chr1.3:43481471-43481490 | None:intergenic | 30.0% | |
| GATATCTTTGGCTGAATTAT+TGG | - | chr1.3:43479396-43479415 | MS.gene81747:intron | 30.0% | |
| GTTGTATAACCATTCATCAA+CGG | + | chr1.3:43478717-43478736 | None:intergenic | 30.0% | |
| TAATAATGTTCTTCGTGGAT+CGG | - | chr1.3:43479962-43479981 | MS.gene81747:intron | 30.0% | |
| TACTATAAAGCAGTATCCAA+AGG | - | chr1.3:43478509-43478528 | MS.gene81747:intron | 30.0% | |
| TAGGATGTAATAGGATGATA+AGG | + | chr1.3:43479202-43479221 | None:intergenic | 30.0% | |
| TCAATGGAAAGATAAAGCAT+GGG | - | chr1.3:43478166-43478185 | MS.gene81747:intron | 30.0% | |
| TCACATTATATGCACAATCT+AGG | + | chr1.3:43478049-43478068 | None:intergenic | 30.0% | |
| TCATATGCCCATAATTTAAG+TGG | + | chr1.3:43481419-43481438 | None:intergenic | 30.0% | |
| TCTAATGCAAATTCTGTTTC+TGG | + | chr1.3:43477042-43477061 | None:intergenic | 30.0% | |
| TGAGTAAAGTGATTACAAAG+TGG | - | chr1.3:43481649-43481668 | MS.gene81747:intron | 30.0% | |
| TGTTTGCAATAAGAAGAGAA+GGG | + | chr1.3:43477273-43477292 | None:intergenic | 30.0% | |
| TTCAATGGAAAGATAAAGCA+TGG | - | chr1.3:43478165-43478184 | MS.gene81747:intron | 30.0% | |
| TTCTTTCTCATTTGTTTCCA+AGG | - | chr1.3:43478993-43479012 | MS.gene81747:CDS | 30.0% | |
| TTTCTCAATTCTCAGTTCAT+AGG | - | chr1.3:43476985-43477004 | MS.gene81747:CDS | 30.0% | |
| TTTGAATTTGACACCTAAAG+AGG | + | chr1.3:43477840-43477859 | None:intergenic | 30.0% | |
| ! | AAACTAATGATAGTGATGTC+AGG | + | chr1.3:43481124-43481143 | None:intergenic | 30.0% |
| ! | ACTCGCAATAGGATTATTTT+TGG | + | chr1.3:43481022-43481041 | None:intergenic | 30.0% |
| ! | AGCAAACATTCTTTTTGTTG+TGG | - | chr1.3:43480093-43480112 | MS.gene81747:intron | 30.0% |
| ! | ATGTTTTCCATGCAAGAAAA+AGG | - | chr1.3:43479362-43479381 | MS.gene81747:CDS | 30.0% |
| ! | ATTTTCATTGTAGTTGTGCT+AGG | - | chr1.3:43481936-43481955 | MS.gene81747:CDS | 30.0% |
| ! | CTAATGCAAATTCTGTTTCT+GGG | + | chr1.3:43477041-43477060 | None:intergenic | 30.0% |
| ! | CTCATACACATGTTGTTTAT+TGG | + | chr1.3:43480810-43480829 | None:intergenic | 30.0% |
| ! | GAATATACTTTTCAGCTTTC+TGG | - | chr1.3:43479033-43479052 | MS.gene81747:intron | 30.0% |
| ! | GAGTATTTTACCACATACAA+AGG | - | chr1.3:43480862-43480881 | MS.gene81747:intron | 30.0% |
| ! | GTATTTTACCACATACAAAG+GGG | - | chr1.3:43480864-43480883 | MS.gene81747:intron | 30.0% |
| ! | GTTGATGAATGGTTATACAA+CGG | - | chr1.3:43478716-43478735 | MS.gene81747:intron | 30.0% |
| ! | TACTTCATTTCTAACGCTTT+TGG | - | chr1.3:43477303-43477322 | MS.gene81747:intron | 30.0% |
| ! | TATTTCCCTTTGCTATGTAT+TGG | - | chr1.3:43481260-43481279 | MS.gene81747:intron | 30.0% |
| ! | TATTTTACCACATACAAAGG+GGG | - | chr1.3:43480865-43480884 | MS.gene81747:intron | 30.0% |
| ! | TGCACAAATTAATACTGACT+GGG | + | chr1.3:43477561-43477580 | None:intergenic | 30.0% |
| ! | TGTCTGTAATAGTATTTCTG+CGG | - | chr1.3:43479559-43479578 | MS.gene81747:intron | 30.0% |
| ! | TTTTCATTGTAGTTGTGCTA+GGG | - | chr1.3:43481937-43481956 | MS.gene81747:CDS | 30.0% |
| !! | AACTATATCAAATTGGCCTT+TGG | + | chr1.3:43478890-43478909 | None:intergenic | 30.0% |
| !! | ATCTTACAAACCGATTTTGT+AGG | + | chr1.3:43480716-43480735 | None:intergenic | 30.0% |
| !! | CAAAATCGGTTTGTAAGATT+AGG | - | chr1.3:43480717-43480736 | MS.gene81747:intron | 30.0% |
| !! | CAGTAATTTCTAGAACCTAT+AGG | + | chr1.3:43480984-43481003 | None:intergenic | 30.0% |
| !! | CTATAGGTTCTAGAAATTAC+TGG | - | chr1.3:43480982-43481001 | MS.gene81747:intron | 30.0% |
| !! | TATTAATTTGTGCATCGACT+TGG | - | chr1.3:43477567-43477586 | MS.gene81747:intron | 30.0% |
| !! | TCTTACAAACCGATTTTGTA+GGG | + | chr1.3:43480715-43480734 | None:intergenic | 30.0% |
| !! | TTTGTTCTGGAAAATGAAAC+AGG | + | chr1.3:43477011-43477030 | None:intergenic | 30.0% |
| !!! | TAGAGAAATAGTTGCTGTTT+TGG | - | chr1.3:43480139-43480158 | MS.gene81747:CDS | 30.0% |
| AAATTATGGGCATATGAGGT+TGG | - | chr1.3:43481422-43481441 | MS.gene81747:intron | 35.0% | |
| AACATTTCTACACCAGTGTT+TGG | + | chr1.3:43482137-43482156 | None:intergenic | 35.0% | |
| AATAATGTTCTTCGTGGATC+GGG | - | chr1.3:43479963-43479982 | MS.gene81747:intron | 35.0% | |
| AATAGGATGATAAGGTGGTT+TGG | + | chr1.3:43479194-43479213 | None:intergenic | 35.0% | |
| AATCCAAGCGATAAAGTAAG+AGG | + | chr1.3:43481087-43481106 | None:intergenic | 35.0% | |
| AATGATACAGTTCACCTTTC+TGG | + | chr1.3:43481153-43481172 | None:intergenic | 35.0% | |
| AATGGTTAATTGTGGTTCAC+AGG | - | chr1.3:43482094-43482113 | MS.gene81747:CDS | 35.0% | |
| AATGTCAAAACACTCGCAAT+AGG | + | chr1.3:43481033-43481052 | None:intergenic | 35.0% | |
| AATGTGAAGTCATTGAGTTC+AGG | - | chr1.3:43478062-43478081 | MS.gene81747:CDS | 35.0% | |
| ACATTCATTATGTGTTCTGC+AGG | - | chr1.3:43481048-43481067 | MS.gene81747:intron | 35.0% | |
| ACCGAAGCCACTTAAATTAT+GGG | - | chr1.3:43481409-43481428 | MS.gene81747:intron | 35.0% | |
| ACTTACTTGACAAGCAAATG+TGG | + | chr1.3:43481814-43481833 | None:intergenic | 35.0% | |
| ATAATCTAGTAATGGTTGGC+TGG | + | chr1.3:43481493-43481512 | None:intergenic | 35.0% | |
| ATACAGAAGTTGCGGTAAAT+TGG | + | chr1.3:43478535-43478554 | None:intergenic | 35.0% | |
| ATACCATCAATATCTACTGG+AGG | + | chr1.3:43478581-43478600 | None:intergenic | 35.0% | |
| ATAGGATGATAAGGTGGTTT+GGG | + | chr1.3:43479193-43479212 | None:intergenic | 35.0% | |
| ATGAGAAAGAATACCTGCAA+AGG | + | chr1.3:43478984-43479003 | None:intergenic | 35.0% | |
| ATGCAAGAAAAAGGTTCCAA+AGG | - | chr1.3:43479371-43479390 | MS.gene81747:CDS | 35.0% | |
| ATTCCTCTTACTTTATCGCT+TGG | - | chr1.3:43481081-43481100 | MS.gene81747:intron | 35.0% | |
| CACAGCCATTATGAAGATTA+AGG | - | chr1.3:43479907-43479926 | MS.gene81747:intron | 35.0% | |
| CCCTTTGATCAAACAATTAC+AGG | + | chr1.3:43477660-43477679 | None:intergenic | 35.0% | |
| CGAATACCATCAATATCTAC+TGG | + | chr1.3:43478584-43478603 | None:intergenic | 35.0% | |
| CTAACTCAACCCTACAAAAT+CGG | - | chr1.3:43480703-43480722 | MS.gene81747:intron | 35.0% | |
| CTATGTAATCACATGCGTTA+GGG | - | chr1.3:43477451-43477470 | MS.gene81747:intron | 35.0% | |
| CTCACTTTACGTAGTATGAA+TGG | + | chr1.3:43477789-43477808 | None:intergenic | 35.0% | |
| CTTAATCTTCATAATGGCTG+TGG | + | chr1.3:43479909-43479928 | None:intergenic | 35.0% | |
| GAAACTGTTGCTCTATACAA+AGG | + | chr1.3:43478290-43478309 | None:intergenic | 35.0% | |
| GATGTAATAGGATGATAAGG+TGG | + | chr1.3:43479199-43479218 | None:intergenic | 35.0% | |
| GTGTTTGCAATAAGAAGAGA+AGG | + | chr1.3:43477274-43477293 | None:intergenic | 35.0% | |
| GTTCCAAAGGAAGATATCTT+TGG | - | chr1.3:43479384-43479403 | MS.gene81747:intron | 35.0% | |
| TAAAACACAGTTCCCTTACA+TGG | - | chr1.3:43480235-43480254 | MS.gene81747:intron | 35.0% | |
| TAAAGTAGAGATCCAGAAAC+AGG | + | chr1.3:43478611-43478630 | None:intergenic | 35.0% | |
| TACCATCAATATCTACTGGA+GGG | + | chr1.3:43478580-43478599 | None:intergenic | 35.0% | |
| TATATCTCAATAGGCTTCTC+TGG | + | chr1.3:43479806-43479825 | None:intergenic | 35.0% | |
| TATTCGATCTGCAATACACT+AGG | + | chr1.3:43479536-43479555 | None:intergenic | 35.0% | |
| TCCTTCCAATACATAGCAAA+GGG | + | chr1.3:43481268-43481287 | None:intergenic | 35.0% | |
| TCTATGTAATCACATGCGTT+AGG | - | chr1.3:43477450-43477469 | MS.gene81747:intron | 35.0% | |
| TGATACAGTCAGTTACTTAC+TGG | + | chr1.3:43481722-43481741 | None:intergenic | 35.0% | |
| TGATGGTAAAGCAATTTCAG+TGG | - | chr1.3:43478103-43478122 | MS.gene81747:intron | 35.0% | |
| TGTGAACCACAATTAACCAT+TGG | + | chr1.3:43482095-43482114 | None:intergenic | 35.0% | |
| TTCCTTCCAATACATAGCAA+AGG | + | chr1.3:43481269-43481288 | None:intergenic | 35.0% | |
| TTGGGCATCTTGAAATAGAT+GGG | - | chr1.3:43480318-43480337 | MS.gene81747:intron | 35.0% | |
| TTGGGGTAGAATTAGAAACT+AGG | - | chr1.3:43477602-43477621 | MS.gene81747:intron | 35.0% | |
| TTTCAGTGGCTTGATTGATT+TGG | - | chr1.3:43478117-43478136 | MS.gene81747:intron | 35.0% | |
| TTTCATTGTAGTTGTGCTAG+GGG | - | chr1.3:43481938-43481957 | MS.gene81747:CDS | 35.0% | |
| TTTGGGCATCTTGAAATAGA+TGG | - | chr1.3:43480317-43480336 | MS.gene81747:intron | 35.0% | |
| ! | AGAGCATTAGTAATCCCTAT+AGG | - | chr1.3:43480966-43480985 | MS.gene81747:intron | 35.0% |
| ! | ATTTGGTGGAATTTCATCCT+TGG | + | chr1.3:43479013-43479032 | None:intergenic | 35.0% |
| ! | GATCTTATAGCAAAGCGTTT+AGG | + | chr1.3:43477158-43477177 | None:intergenic | 35.0% |
| ! | GTTTCTGGATCTCTACTTTA+CGG | - | chr1.3:43478611-43478630 | MS.gene81747:intron | 35.0% |
| ! | TTTGCACTTTTACCCGATAT+GGG | - | chr1.3:43478682-43478701 | MS.gene81747:intron | 35.0% |
| !! | AGATGTTTCTGTTTCTGACA+TGG | + | chr1.3:43477066-43477085 | None:intergenic | 35.0% |
| !! | CACAACATTGACTTAGATAG+TGG | - | chr1.3:43479240-43479259 | MS.gene81747:intron | 35.0% |
| !! | CTACTGGAGTTTTTGTTTCT+GGG | - | chr1.3:43477231-43477250 | MS.gene81747:intron | 35.0% |
| !! | GGTATGGTCTATTGTTTTGT+AGG | - | chr1.3:43480009-43480028 | MS.gene81747:intron | 35.0% |
| !! | TGTTGATGATGAAGTTGAAG+TGG | + | chr1.3:43477093-43477112 | None:intergenic | 35.0% |
| !! | TTTGGAACCTTTTTCTTGCA+TGG | + | chr1.3:43479372-43479391 | None:intergenic | 35.0% |
| !! | TTTTTGGGAAACTTGGTATC+TGG | + | chr1.3:43477982-43478001 | None:intergenic | 35.0% |
| !!! | GGTCTGTGGATTTTTTACAT+AGG | - | chr1.3:43478142-43478161 | MS.gene81747:intron | 35.0% |
| !!! | TTTTTGCAGTCATTGACTTG+CGG | - | chr1.3:43481196-43481215 | MS.gene81747:intron | 35.0% |
| AATCGTTGTAAGATGCGAGA+TGG | + | chr1.3:43480414-43480433 | None:intergenic | 40.0% | |
| AATGATTCCCCCTTTGTATG+TGG | + | chr1.3:43480875-43480894 | None:intergenic | 40.0% | |
| ACAACCTTCGCACGAAAATT+CGG | + | chr1.3:43480203-43480222 | None:intergenic | 40.0% | |
| ACACATGAATTGTTATCGCC+TGG | + | chr1.3:43477867-43477886 | None:intergenic | 40.0% | |
| ACACCAACACTTCTAATCGA+AGG | + | chr1.3:43477513-43477532 | None:intergenic | 40.0% | |
| ACATGAATTGTTATCGCCTG+GGG | + | chr1.3:43477865-43477884 | None:intergenic | 40.0% | |
| ACCATCAATATCTACTGGAG+GGG | + | chr1.3:43478579-43478598 | None:intergenic | 40.0% | |
| CACATGAATTGTTATCGCCT+GGG | + | chr1.3:43477866-43477885 | None:intergenic | 40.0% | |
| CACCGAAGCCACTTAAATTA+TGG | - | chr1.3:43481408-43481427 | MS.gene81747:intron | 40.0% | |
| CACGACATGGTATTTGTCAA+TGG | - | chr1.3:43482057-43482076 | MS.gene81747:CDS | 40.0% | |
| CAGCCAAAGATATCTTCCTT+TGG | + | chr1.3:43479390-43479409 | None:intergenic | 40.0% | |
| CATAATTTAAGTGGCTTCGG+TGG | + | chr1.3:43481410-43481429 | None:intergenic | 40.0% | |
| CCTTGTTAACACTAGTAGTG+CGG | - | chr1.3:43479736-43479755 | MS.gene81747:intron | 40.0% | |
| GACAAGACTCTTGAGATTCT+TGG | - | chr1.3:43477179-43477198 | MS.gene81747:CDS | 40.0% | |
| GACCATACCTTTCGACAAAA+TGG | + | chr1.3:43479998-43480017 | None:intergenic | 40.0% | |
| GAGACAATCGTACCATGTAA+GGG | + | chr1.3:43480250-43480269 | None:intergenic | 40.0% | |
| GATGAATGGTTATACAACGG+TGG | - | chr1.3:43478719-43478738 | MS.gene81747:intron | 40.0% | |
| GCCCATAATTTAAGTGGCTT+CGG | + | chr1.3:43481413-43481432 | None:intergenic | 40.0% | |
| GCGATAACAATTCATGTGTC+GGG | - | chr1.3:43477868-43477887 | MS.gene81747:intron | 40.0% | |
| GGCGATAACAATTCATGTGT+CGG | - | chr1.3:43477867-43477886 | MS.gene81747:intron | 40.0% | |
| GTAAAGTGAGTTAACTCGCT+TGG | - | chr1.3:43477799-43477818 | MS.gene81747:intron | 40.0% | |
| GTGTTTGGATCTTCCAAGAA+AGG | + | chr1.3:43482122-43482141 | None:intergenic | 40.0% | |
| TAGGATGATAAGGTGGTTTG+GGG | + | chr1.3:43479192-43479211 | None:intergenic | 40.0% | |
| TATGCTTGGTCGCATTACAA+AGG | - | chr1.3:43481225-43481244 | MS.gene81747:intron | 40.0% | |
| TCAGAAAACTGGACATTTCC+AGG | - | chr1.3:43481985-43482004 | MS.gene81747:CDS | 40.0% | |
| TCATTAAGCATTAGGATGCG+TGG | + | chr1.3:43481463-43481482 | None:intergenic | 40.0% | |
| TCTTTACAAGCTTCACGACA+TGG | - | chr1.3:43482044-43482063 | MS.gene81747:CDS | 40.0% | |
| TGCCATTATTCCTACTTCTG+CGG | - | chr1.3:43478652-43478671 | MS.gene81747:intron | 40.0% | |
| TTCTATCCTTGCCCAAGAAA+CGG | - | chr1.3:43480176-43480195 | MS.gene81747:intron | 40.0% | |
| TTCTTGGAAGATCCAAACAC+TGG | - | chr1.3:43482122-43482141 | MS.gene81747:CDS | 40.0% | |
| TTGCTTATCACACCTTGTGA+TGG | - | chr1.3:43480472-43480491 | MS.gene81747:intron | 40.0% | |
| ! | AAGCAGTTTAGCTTAGTGAC+TGG | + | chr1.3:43480348-43480367 | None:intergenic | 40.0% |
| ! | AATCGTACGTGAAGTACTTG+TGG | - | chr1.3:43481777-43481796 | MS.gene81747:intron | 40.0% |
| ! | ACGTGAAGTACTTGTGGAAT+TGG | - | chr1.3:43481783-43481802 | MS.gene81747:intron | 40.0% |
| ! | ATAGCAAAGCGTTTAGGTTC+AGG | + | chr1.3:43477152-43477171 | None:intergenic | 40.0% |
| ! | ATGCCTTCGATTAGAAGTGT+TGG | - | chr1.3:43477507-43477526 | MS.gene81747:intron | 40.0% |
| ! | GTCCATTTTGTCGAAAGGTA+TGG | - | chr1.3:43479993-43480012 | MS.gene81747:intron | 40.0% |
| ! | GTTTGCACTTTTACCCGATA+TGG | - | chr1.3:43478681-43478700 | MS.gene81747:intron | 40.0% |
| ! | TAGCAAAGCGTTTAGGTTCA+GGG | + | chr1.3:43477151-43477170 | None:intergenic | 40.0% |
| ! | TCACGTACGATTTTGCAGAA+AGG | + | chr1.3:43481769-43481788 | None:intergenic | 40.0% |
| ! | TCCCTTTGCTATGTATTGGA+AGG | - | chr1.3:43481264-43481283 | MS.gene81747:intron | 40.0% |
| !! | AGTGGCTTGATTGATTTGGT+TGG | - | chr1.3:43478121-43478140 | MS.gene81747:intron | 40.0% |
| !! | GCTACTGGAGTTTTTGTTTC+TGG | - | chr1.3:43477230-43477249 | MS.gene81747:intron | 40.0% |
| !! | GTATTTCTGCGGTTTTAGTG+TGG | - | chr1.3:43479570-43479589 | MS.gene81747:intron | 40.0% |
| !! | TATTAGGTTGACCCAAACAC+TGG | - | chr1.3:43480541-43480560 | MS.gene81747:intron | 40.0% |
| !! | TGATTGATTTGGTTGGTCTG+TGG | - | chr1.3:43478128-43478147 | MS.gene81747:intron | 40.0% |
| !! | TGGTGTTACAGAGCATGTAT+GGG | - | chr1.3:43477527-43477546 | MS.gene81747:intron | 40.0% |
| !! | TTGGTGTTACAGAGCATGTA+TGG | - | chr1.3:43477526-43477545 | MS.gene81747:intron | 40.0% |
| !!! | ACGCTTTTGGTTTGTGACAA+TGG | - | chr1.3:43477316-43477335 | MS.gene81747:intron | 40.0% |
| !!! | CTTTTTTGTTGTGCCTTTGC+AGG | - | chr1.3:43478968-43478987 | MS.gene81747:CDS | 40.0% |
| AAAGCGAAAGAGCAAGGGAA+GGG | + | chr1.3:43477210-43477229 | None:intergenic | 45.0% | |
| AACACTAGTAGTGCGGTTTC+AGG | - | chr1.3:43479743-43479762 | MS.gene81747:intron | 45.0% | |
| ACATCGAAACGCCAGTGTTT+GGG | + | chr1.3:43480555-43480574 | None:intergenic | 45.0% | |
| AGCCGCAGAAGTAGGAATAA+TGG | + | chr1.3:43478657-43478676 | None:intergenic | 45.0% | |
| AGTAGCAAAGCGAAAGAGCA+AGG | + | chr1.3:43477216-43477235 | None:intergenic | 45.0% | |
| ATTATGTGTTCTGCAGGCGA+TGG | - | chr1.3:43481054-43481073 | MS.gene81747:intron | 45.0% | |
| ATTCCTACTTCTGCGGCTAT+CGG | - | chr1.3:43478659-43478678 | MS.gene81747:intron | 45.0% | |
| CAACCTTCGCACGAAAATTC+GGG | + | chr1.3:43480202-43480221 | None:intergenic | 45.0% | |
| CATGAATTGTTATCGCCTGG+GGG | + | chr1.3:43477864-43477883 | None:intergenic | 45.0% | |
| CCGCACTACTAGTGTTAACA+AGG | + | chr1.3:43479739-43479758 | None:intergenic | 45.0% | |
| GAAAATTCGGGCCGTTTCTT+GGG | + | chr1.3:43480190-43480209 | None:intergenic | 45.0% | |
| GGAGACAATCGTACCATGTA+AGG | + | chr1.3:43480251-43480270 | None:intergenic | 45.0% | |
| GTAGCAAAGCGAAAGAGCAA+GGG | + | chr1.3:43477215-43477234 | None:intergenic | 45.0% | |
| GTGTCAAATTCAAATCCCCC+AGG | - | chr1.3:43477846-43477865 | MS.gene81747:intron | 45.0% | |
| TACATCGAAACGCCAGTGTT+TGG | + | chr1.3:43480556-43480575 | None:intergenic | 45.0% | |
| TGGTTCACAGGTACCTTTCT+TGG | - | chr1.3:43482106-43482125 | MS.gene81747:CDS | 45.0% | |
| TGTTAGACGCTGACACATGT+CGG | - | chr1.3:43477474-43477493 | MS.gene81747:intron | 45.0% | |
| TTGCTCTTTCGCTTTGCTAC+TGG | - | chr1.3:43477215-43477234 | MS.gene81747:intron | 45.0% | |
| ! | AAGCTGCATCCGTTGATGAA+TGG | - | chr1.3:43478705-43478724 | MS.gene81747:intron | 45.0% |
| ! | AGCAAAGCGTTTAGGTTCAG+GGG | + | chr1.3:43477150-43477169 | None:intergenic | 45.0% |
| ! | CAGCTGTCCATTTTGTCGAA+AGG | - | chr1.3:43479988-43480007 | MS.gene81747:intron | 45.0% |
| ! | GGTTCAGGGGGTTTGAAATT+TGG | + | chr1.3:43477137-43477156 | None:intergenic | 45.0% |
| ! | TCAGGGGGTTTGAAATTTGG+AGG | + | chr1.3:43477134-43477153 | None:intergenic | 45.0% |
| ! | TTCTAATCGAAGGCATGTCC+CGG | + | chr1.3:43477503-43477522 | None:intergenic | 45.0% |
| !! | AATTTGTGCATCGACTTGGC+TGG | - | chr1.3:43477571-43477590 | MS.gene81747:intron | 45.0% |
| !! | ACTGGAGAGATGATGGATTG+TGG | + | chr1.3:43479158-43479177 | None:intergenic | 45.0% |
| !! | ACTTGCGGTTTTGCTATGCT+TGG | - | chr1.3:43481211-43481230 | MS.gene81747:intron | 45.0% |
| !! | ACTTGGCTGGTTTCACTGTT+GGG | - | chr1.3:43477584-43477603 | MS.gene81747:intron | 45.0% |
| !! | AGTTGCGGTAAATTGGCCTT+TGG | + | chr1.3:43478528-43478547 | None:intergenic | 45.0% |
| !! | ATTGGTCTTCCGCTAGTAGA+CGG | - | chr1.3:43477922-43477941 | MS.gene81747:CDS | 45.0% |
| !!! | TCTGGGCAGTAGTTTTGTTC+TGG | + | chr1.3:43477024-43477043 | None:intergenic | 45.0% |
| !!! | TTATAAAGTTTTTTTTTTTT+GGG | + | chr1.3:43477997-43478016 | None:intergenic | 5.0% |
| !!! | TTTATAAAGTTTTTTTTTTT+TGG | + | chr1.3:43477998-43478017 | None:intergenic | 5.0% |
| AAACCGATAGCCGCAGAAGT+AGG | + | chr1.3:43478665-43478684 | None:intergenic | 50.0% | |
| ACGGATGCAGCTTCCCATAT+CGG | + | chr1.3:43478698-43478717 | None:intergenic | 50.0% | |
| ATTGAAGCCAGAGCAAAGCC+CGG | + | chr1.3:43477904-43477923 | None:intergenic | 50.0% | |
| CAAAGCGAAAGAGCAAGGGA+AGG | + | chr1.3:43477211-43477230 | None:intergenic | 50.0% | |
| CCAAGGATCGACTAATCCAG+GGG | + | chr1.3:43477958-43477977 | None:intergenic | 50.0% | |
| CCCAAGGATCGACTAATCCA+GGG | + | chr1.3:43477959-43477978 | None:intergenic | 50.0% | |
| CGAAAATTCGGGCCGTTTCT+TGG | + | chr1.3:43480191-43480210 | None:intergenic | 50.0% | |
| CGTGCGAAGGTTGTTGAGAT+GGG | - | chr1.3:43480209-43480228 | MS.gene81747:intron | 50.0% | |
| GAAACTTGGTATCTGGCCCA+AGG | + | chr1.3:43477975-43477994 | None:intergenic | 50.0% | |
| GAGTTAACTCGCTTGGACGT+GGG | - | chr1.3:43477806-43477825 | MS.gene81747:intron | 50.0% | |
| GCCCCTCCAGTAGATATTGA+TGG | - | chr1.3:43478575-43478594 | MS.gene81747:CDS | 50.0% | |
| GGTATTCGTGAGCCTGTTTC+TGG | - | chr1.3:43478596-43478615 | MS.gene81747:intron | 50.0% | |
| TCGTGCGAAGGTTGTTGAGA+TGG | - | chr1.3:43480208-43480227 | MS.gene81747:intron | 50.0% | |
| TGAGTTAACTCGCTTGGACG+TGG | - | chr1.3:43477805-43477824 | MS.gene81747:intron | 50.0% | |
| ! | GATGCGTGGTTTGCATGTTG+TGG | + | chr1.3:43481449-43481468 | None:intergenic | 50.0% |
| ! | GCAAAGCGTTTAGGTTCAGG+GGG | + | chr1.3:43477149-43477168 | None:intergenic | 50.0% |
| ! | GGCTTTGCTCTGGCTTCAAT+TGG | - | chr1.3:43477904-43477923 | MS.gene81747:intron | 50.0% |
| ! | GGGGGTTTGAAATTTGGAGG+AGG | + | chr1.3:43477131-43477150 | None:intergenic | 50.0% |
| !! | CCCTGGATTAGTCGATCCTT+GGG | - | chr1.3:43477956-43477975 | MS.gene81747:intron | 50.0% |
| !! | CTTGGCTGGTTTCACTGTTG+GGG | - | chr1.3:43477585-43477604 | MS.gene81747:intron | 50.0% |
| !! | GACTTGGCTGGTTTCACTGT+TGG | - | chr1.3:43477583-43477602 | MS.gene81747:intron | 50.0% |
| CAGAGTTCCTGTTCCAGCCA+TGG | + | chr1.3:43476961-43476980 | None:intergenic | 55.0% | |
| CCAATCCCACCGTCTACTAG+CGG | + | chr1.3:43477934-43477953 | None:intergenic | 55.0% | |
| CGCAAGGACTGGAGAGATGA+TGG | + | chr1.3:43479165-43479184 | None:intergenic | 55.0% | |
| CGGATGCAGCTTCCCATATC+GGG | + | chr1.3:43478697-43478716 | None:intergenic | 55.0% | |
| GCCCAAGGATCGACTAATCC+AGG | + | chr1.3:43477960-43477979 | None:intergenic | 55.0% | |
| GCGAAGGTTGTTGAGATGGG+TGG | - | chr1.3:43480212-43480231 | MS.gene81747:intron | 55.0% | |
| GTCTTCCGCTAGTAGACGGT+GGG | - | chr1.3:43477926-43477945 | MS.gene81747:CDS | 55.0% | |
| TTTGGGGAAGTCGCAAGGAC+TGG | + | chr1.3:43479176-43479195 | None:intergenic | 55.0% | |
| ! | GTGGGAGTGTGCTCCTCTTT+AGG | - | chr1.3:43477824-43477843 | MS.gene81747:intron | 55.0% |
| !! | CCCCTGGATTAGTCGATCCT+TGG | - | chr1.3:43477955-43477974 | MS.gene81747:intron | 55.0% |
| AGCCAGAGCAAAGCCCGGTA+TGG | + | chr1.3:43477899-43477918 | None:intergenic | 60.0% | |
| CCGCTAGTAGACGGTGGGAT+TGG | - | chr1.3:43477931-43477950 | MS.gene81747:CDS | 60.0% | |
| CGCTGACACATGTCGGACAC+CGG | - | chr1.3:43477481-43477500 | MS.gene81747:intron | 60.0% | |
| GAGCAAAGCCCGGTATGGAC+TGG | + | chr1.3:43477894-43477913 | None:intergenic | 60.0% | |
| GCTGACACATGTCGGACACC+GGG | - | chr1.3:43477482-43477501 | MS.gene81747:intron | 60.0% | |
| GGCTTCGGTGGTAACTTCGC+TGG | + | chr1.3:43481398-43481417 | None:intergenic | 60.0% | |
| GGTCTTCCGCTAGTAGACGG+TGG | - | chr1.3:43477925-43477944 | MS.gene81747:CDS | 60.0% | |
| GTCCATACCGGGCTTTGCTC+TGG | - | chr1.3:43477894-43477913 | MS.gene81747:intron | 60.0% | |
| TGTGTCGGGCCAGTCCATAC+CGG | - | chr1.3:43477882-43477901 | MS.gene81747:intron | 60.0% | |
| TTCGGGCCGTTTCTTGGGCA+AGG | + | chr1.3:43480185-43480204 | None:intergenic | 60.0% | |
| ! | CGGCCCGAATTTTCGTGCGA+AGG | - | chr1.3:43480196-43480215 | MS.gene81747:intron | 60.0% |
| ! | GGTGGTTTGGGGAAGTCGCA+AGG | + | chr1.3:43479181-43479200 | None:intergenic | 60.0% |
| GTGTCGGGCCAGTCCATACC+GGG | - | chr1.3:43477883-43477902 | MS.gene81747:intron | 65.0% | |
| !! | AGACGGTGGGATTGGTCCCC+TGG | - | chr1.3:43477939-43477958 | MS.gene81747:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 43476954 | 43482205 | 43476954 | ID=MS.gene81747 |
| chr1.3 | mRNA | 43476954 | 43482205 | 43476954 | ID=MS.gene81747.t1;Parent=MS.gene81747 |
| chr1.3 | exon | 43481907 | 43482205 | 43481907 | ID=MS.gene81747.t1.exon1;Parent=MS.gene81747.t1 |
| chr1.3 | CDS | 43481907 | 43482205 | 43481907 | ID=cds.MS.gene81747.t1;Parent=MS.gene81747.t1 |
| chr1.3 | exon | 43480105 | 43480169 | 43480105 | ID=MS.gene81747.t1.exon2;Parent=MS.gene81747.t1 |
| chr1.3 | CDS | 43480105 | 43480169 | 43480105 | ID=cds.MS.gene81747.t1;Parent=MS.gene81747.t1 |
| chr1.3 | exon | 43479322 | 43479394 | 43479322 | ID=MS.gene81747.t1.exon3;Parent=MS.gene81747.t1 |
| chr1.3 | CDS | 43479322 | 43479394 | 43479322 | ID=cds.MS.gene81747.t1;Parent=MS.gene81747.t1 |
| chr1.3 | exon | 43479150 | 43479168 | 43479150 | ID=MS.gene81747.t1.exon4;Parent=MS.gene81747.t1 |
| chr1.3 | CDS | 43479150 | 43479168 | 43479150 | ID=cds.MS.gene81747.t1;Parent=MS.gene81747.t1 |
| chr1.3 | exon | 43478903 | 43479022 | 43478903 | ID=MS.gene81747.t1.exon5;Parent=MS.gene81747.t1 |
| chr1.3 | CDS | 43478903 | 43479022 | 43478903 | ID=cds.MS.gene81747.t1;Parent=MS.gene81747.t1 |
| chr1.3 | exon | 43478543 | 43478612 | 43478543 | ID=MS.gene81747.t1.exon6;Parent=MS.gene81747.t1 |
| chr1.3 | CDS | 43478543 | 43478612 | 43478543 | ID=cds.MS.gene81747.t1;Parent=MS.gene81747.t1 |
| chr1.3 | exon | 43478046 | 43478089 | 43478046 | ID=MS.gene81747.t1.exon7;Parent=MS.gene81747.t1 |
| chr1.3 | CDS | 43478046 | 43478089 | 43478046 | ID=cds.MS.gene81747.t1;Parent=MS.gene81747.t1 |
| chr1.3 | exon | 43477913 | 43477954 | 43477913 | ID=MS.gene81747.t1.exon8;Parent=MS.gene81747.t1 |
| chr1.3 | CDS | 43477913 | 43477954 | 43477913 | ID=cds.MS.gene81747.t1;Parent=MS.gene81747.t1 |
| chr1.3 | exon | 43477720 | 43477779 | 43477720 | ID=MS.gene81747.t1.exon9;Parent=MS.gene81747.t1 |
| chr1.3 | CDS | 43477720 | 43477779 | 43477720 | ID=cds.MS.gene81747.t1;Parent=MS.gene81747.t1 |
| chr1.3 | exon | 43477332 | 43477399 | 43477332 | ID=MS.gene81747.t1.exon10;Parent=MS.gene81747.t1 |
| chr1.3 | CDS | 43477332 | 43477399 | 43477332 | ID=cds.MS.gene81747.t1;Parent=MS.gene81747.t1 |
| chr1.3 | exon | 43477153 | 43477210 | 43477153 | ID=MS.gene81747.t1.exon11;Parent=MS.gene81747.t1 |
| chr1.3 | CDS | 43477153 | 43477210 | 43477153 | ID=cds.MS.gene81747.t1;Parent=MS.gene81747.t1 |
| chr1.3 | exon | 43476954 | 43477043 | 43476954 | ID=MS.gene81747.t1.exon12;Parent=MS.gene81747.t1 |
| chr1.3 | CDS | 43476954 | 43477043 | 43476954 | ID=cds.MS.gene81747.t1;Parent=MS.gene81747.t1 |
| Gene Sequence |
| Protein sequence |
