Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57264.t1 | XP_013465889.1 | 98.2 | 452 | 8 | 0 | 1 | 452 | 1 | 452 | 4.60E-259 | 903.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57264.t1 | Q8H1F5 | 58.2 | 318 | 86 | 8 | 11 | 288 | 21 | 331 | 7.8e-90 | 332.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57264.t1 | A0A072VP83 | 98.2 | 452 | 8 | 0 | 1 | 452 | 1 | 452 | 3.3e-259 | 903.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene57264.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene57264 | 0.824828 | 6.53E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene57264 | 0.8098 | 1.58E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene57264 | 0.825771 | 3.91E-54 | -1.69E-46 |
| MS.gene049232 | MS.gene57264 | 0.801386 | 9.23E-49 | -1.69E-46 |
| MS.gene049373 | MS.gene57264 | 0.81346 | 2.53E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene57264 | 0.826673 | 2.38E-54 | -1.69E-46 |
| MS.gene049633 | MS.gene57264 | 0.847311 | 1.25E-59 | -1.69E-46 |
| MS.gene049865 | MS.gene57264 | 0.816269 | 6.03E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene57264 | 0.801542 | 8.57E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene57264 | 0.849523 | 3.06E-60 | -1.69E-46 |
| MS.gene050323 | MS.gene57264 | 0.84353 | 1.32E-58 | -1.69E-46 |
| MS.gene050496 | MS.gene57264 | 0.839845 | 1.24E-57 | -1.69E-46 |
| MS.gene050502 | MS.gene57264 | 0.800554 | 1.36E-48 | -1.69E-46 |
| MS.gene050504 | MS.gene57264 | 0.830812 | 2.38E-55 | -1.69E-46 |
| MS.gene050553 | MS.gene57264 | 0.809954 | 1.47E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene57264 | 0.815325 | 9.80E-52 | -1.69E-46 |
| MS.gene050593 | MS.gene57264 | 0.80701 | 6.23E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene57264 | 0.81001 | 1.43E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene57264 | 0.83904 | 2.01E-57 | -1.69E-46 |
| MS.gene050699 | MS.gene57264 | 0.815558 | 8.70E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene57264 | 0.824074 | 9.83E-54 | -1.69E-46 |
| MS.gene050772 | MS.gene57264 | 0.817217 | 3.70E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene57264 | 0.825886 | 3.67E-54 | -1.69E-46 |
| MS.gene05081 | MS.gene57264 | 0.82506 | 5.76E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene57264 | 0.864373 | 1.27E-64 | -1.69E-46 |
| MS.gene050871 | MS.gene57264 | 0.867295 | 1.52E-65 | -1.69E-46 |
| MS.gene050904 | MS.gene57264 | 0.813183 | 2.91E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene57264 | 0.819263 | 1.27E-52 | -1.69E-46 |
| MS.gene050986 | MS.gene57264 | 0.805916 | 1.06E-49 | -1.69E-46 |
| MS.gene051268 | MS.gene57264 | 0.831362 | 1.74E-55 | -1.69E-46 |
| MS.gene051838 | MS.gene57264 | 0.856338 | 3.44E-62 | -1.69E-46 |
| MS.gene051858 | MS.gene57264 | 0.824196 | 9.20E-54 | -1.69E-46 |
| MS.gene051874 | MS.gene57264 | 0.821047 | 4.97E-53 | -1.69E-46 |
| MS.gene051941 | MS.gene57264 | 0.843393 | 1.44E-58 | -1.69E-46 |
| MS.gene052164 | MS.gene57264 | 0.839283 | 1.74E-57 | -1.69E-46 |
| MS.gene052346 | MS.gene57264 | 0.823806 | 1.14E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene57264 | 0.808615 | 2.84E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene57264 | 0.832173 | 1.10E-55 | -1.69E-46 |
| MS.gene052503 | MS.gene57264 | 0.834778 | 2.46E-56 | -1.69E-46 |
| MS.gene052506 | MS.gene57264 | 0.810284 | 1.24E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene57264 | 0.832623 | 8.51E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene57264 | 0.826411 | 2.75E-54 | -1.69E-46 |
| MS.gene052825 | MS.gene57264 | 0.833544 | 5.02E-56 | -1.69E-46 |
| MS.gene052872 | MS.gene57264 | 0.811715 | 6.09E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene57264 | 0.866262 | 3.24E-65 | -1.69E-46 |
| MS.gene053203 | MS.gene57264 | 0.857652 | 1.41E-62 | -1.69E-46 |
| MS.gene053207 | MS.gene57264 | 0.825482 | 4.58E-54 | -1.69E-46 |
| MS.gene053213 | MS.gene57264 | 0.803671 | 3.12E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene57264 | 0.807331 | 5.33E-50 | -1.69E-46 |
| MS.gene053318 | MS.gene57264 | 0.839745 | 1.32E-57 | -1.69E-46 |
| MS.gene053436 | MS.gene57264 | 0.806459 | 8.14E-50 | -1.69E-46 |
| MS.gene053449 | MS.gene57264 | 0.805452 | 1.33E-49 | -1.69E-46 |
| MS.gene053479 | MS.gene57264 | 0.862178 | 6.09E-64 | -1.69E-46 |
| MS.gene053480 | MS.gene57264 | 0.848393 | 6.31E-60 | -1.69E-46 |
| MS.gene053574 | MS.gene57264 | 0.819636 | 1.05E-52 | -1.69E-46 |
| MS.gene053626 | MS.gene57264 | 0.819165 | 1.34E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene57264 | 0.806706 | 7.22E-50 | -1.69E-46 |
| MS.gene053633 | MS.gene57264 | 0.83264 | 8.43E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene57264 | 0.855818 | 4.89E-62 | -1.69E-46 |
| MS.gene053997 | MS.gene57264 | 0.817301 | 3.54E-52 | -1.69E-46 |
| MS.gene054003 | MS.gene57264 | 0.83398 | 3.91E-56 | -1.69E-46 |
| MS.gene054595 | MS.gene57264 | 0.849917 | 2.38E-60 | -1.69E-46 |
| MS.gene054600 | MS.gene57264 | 0.825376 | 4.85E-54 | -1.69E-46 |
| MS.gene05470 | MS.gene57264 | 0.816483 | 5.40E-52 | -1.69E-46 |
| MS.gene054927 | MS.gene57264 | 0.805607 | 1.23E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene57264 | 0.842506 | 2.48E-58 | -1.69E-46 |
| MS.gene054954 | MS.gene57264 | 0.80508 | 1.59E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene57264 | 0.82894 | 6.80E-55 | -1.69E-46 |
| MS.gene055224 | MS.gene57264 | 0.804408 | 2.19E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene57264 | 0.807991 | 3.86E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene57264 | 0.833718 | 4.54E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene57264 | 0.863901 | 1.79E-64 | -1.69E-46 |
| MS.gene055722 | MS.gene57264 | 0.82383 | 1.12E-53 | -1.69E-46 |
| MS.gene055741 | MS.gene57264 | 0.811554 | 6.61E-51 | -1.69E-46 |
| MS.gene055744 | MS.gene57264 | 0.80226 | 6.10E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene57264 | 0.807359 | 5.25E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene57264 | 0.843918 | 1.04E-58 | -1.69E-46 |
| MS.gene055909 | MS.gene57264 | 0.814262 | 1.68E-51 | -1.69E-46 |
| MS.gene055911 | MS.gene57264 | 0.812494 | 4.12E-51 | -1.69E-46 |
| MS.gene055941 | MS.gene57264 | 0.85191 | 6.52E-61 | -1.69E-46 |
| MS.gene05601 | MS.gene57264 | 0.820333 | 7.25E-53 | -1.69E-46 |
| MS.gene056040 | MS.gene57264 | 0.817352 | 3.45E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene57264 | 0.839398 | 1.62E-57 | -1.69E-46 |
| MS.gene056387 | MS.gene57264 | 0.82802 | 1.13E-54 | -1.69E-46 |
| MS.gene056448 | MS.gene57264 | 0.807742 | 4.36E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene57264 | 0.840811 | 6.94E-58 | -1.69E-46 |
| MS.gene056510 | MS.gene57264 | 0.846123 | 2.65E-59 | -1.69E-46 |
| MS.gene05666 | MS.gene57264 | 0.815173 | 1.06E-51 | -1.69E-46 |
| MS.gene056877 | MS.gene57264 | 0.826721 | 2.32E-54 | -1.69E-46 |
| MS.gene056878 | MS.gene57264 | 0.808127 | 3.61E-50 | -1.69E-46 |
| MS.gene057019 | MS.gene57264 | 0.815905 | 7.27E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene57264 | 0.826109 | 3.25E-54 | -1.69E-46 |
| MS.gene057086 | MS.gene57264 | 0.82989 | 4.00E-55 | -1.69E-46 |
| MS.gene057289 | MS.gene57264 | 0.815103 | 1.10E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene57264 | 0.804016 | 2.64E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene57264 | 0.813015 | 3.17E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene57264 | 0.821777 | 3.37E-53 | -1.69E-46 |
| MS.gene057856 | MS.gene57264 | 0.835731 | 1.41E-56 | -1.69E-46 |
| MS.gene057857 | MS.gene57264 | 0.85311 | 2.97E-61 | -1.69E-46 |
| MS.gene05787 | MS.gene57264 | 0.820003 | 8.63E-53 | -1.69E-46 |
| MS.gene058130 | MS.gene57264 | 0.805797 | 1.12E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene57264 | 0.849879 | 2.44E-60 | -1.69E-46 |
| MS.gene058338 | MS.gene57264 | 0.820935 | 5.27E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene57264 | 0.856987 | 2.22E-62 | -1.69E-46 |
| MS.gene058419 | MS.gene57264 | 0.800887 | 1.17E-48 | -1.69E-46 |
| MS.gene058773 | MS.gene57264 | 0.807612 | 4.64E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene57264 | 0.823788 | 1.15E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene57264 | 0.810825 | 9.51E-51 | -1.69E-46 |
| MS.gene059023 | MS.gene57264 | 0.85377 | 1.92E-61 | -1.69E-46 |
| MS.gene059129 | MS.gene57264 | 0.817706 | 2.87E-52 | -1.69E-46 |
| MS.gene059303 | MS.gene57264 | 0.840699 | 7.43E-58 | -1.69E-46 |
| MS.gene059367 | MS.gene57264 | 0.823234 | 1.55E-53 | -1.69E-46 |
| MS.gene059368 | MS.gene57264 | 0.80652 | 7.90E-50 | -1.69E-46 |
| MS.gene059680 | MS.gene57264 | 0.81638 | 5.70E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene57264 | 0.840283 | 9.54E-58 | -1.69E-46 |
| MS.gene059756 | MS.gene57264 | 0.818579 | 1.82E-52 | -1.69E-46 |
| MS.gene059801 | MS.gene57264 | 0.821131 | 4.75E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene57264 | 0.827105 | 1.88E-54 | -1.69E-46 |
| MS.gene059902 | MS.gene57264 | 0.813691 | 2.25E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene57264 | 0.807306 | 5.39E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene57264 | 0.806285 | 8.86E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene57264 | 0.870355 | 1.55E-66 | -1.69E-46 |
| MS.gene060187 | MS.gene57264 | -0.815154 | 1.07E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene57264 | 0.822363 | 2.47E-53 | -1.69E-46 |
| MS.gene060485 | MS.gene57264 | 0.81167 | 6.23E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene57264 | -0.828637 | 8.05E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene57264 | 0.824155 | 9.41E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene57264 | 0.856867 | 2.41E-62 | -1.69E-46 |
| MS.gene06077 | MS.gene57264 | 0.841535 | 4.48E-58 | -1.69E-46 |
| MS.gene060835 | MS.gene57264 | 0.810295 | 1.24E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene57264 | 0.830609 | 2.67E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene57264 | 0.801899 | 7.24E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene57264 | 0.851264 | 9.94E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57264.t1 | MTR_1g016010 | 98.230 | 452 | 8 | 0 | 1 | 452 | 1 | 452 | 0.0 | 932 |
| MS.gene57264.t1 | MTR_2g099990 | 48.577 | 492 | 176 | 16 | 11 | 452 | 1 | 465 | 1.35e-132 | 390 |
| MS.gene57264.t1 | MTR_8g017210 | 47.129 | 505 | 187 | 14 | 1 | 433 | 1 | 497 | 6.76e-129 | 383 |
| MS.gene57264.t1 | MTR_2g099990 | 48.941 | 425 | 151 | 16 | 65 | 452 | 1 | 396 | 8.63e-113 | 338 |
| MS.gene57264.t1 | MTR_4g059870 | 73.711 | 194 | 50 | 1 | 16 | 208 | 12 | 205 | 5.03e-105 | 321 |
| MS.gene57264.t1 | MTR_1g094115 | 76.216 | 185 | 41 | 3 | 38 | 222 | 45 | 226 | 8.32e-102 | 314 |
| MS.gene57264.t1 | MTR_2g093960 | 44.784 | 393 | 162 | 10 | 40 | 420 | 31 | 380 | 1.18e-101 | 310 |
| MS.gene57264.t1 | MTR_1g112270 | 81.013 | 158 | 29 | 1 | 44 | 201 | 47 | 203 | 1.52e-97 | 304 |
| MS.gene57264.t1 | MTR_1g112270 | 75.740 | 169 | 29 | 2 | 44 | 201 | 47 | 214 | 6.26e-94 | 295 |
| MS.gene57264.t1 | MTR_2g090745 | 79.618 | 157 | 31 | 1 | 51 | 207 | 17 | 172 | 9.80e-92 | 285 |
| MS.gene57264.t1 | MTR_1g094115 | 69.189 | 185 | 37 | 4 | 38 | 222 | 45 | 209 | 1.77e-86 | 274 |
| MS.gene57264.t1 | MTR_2g017720 | 72.727 | 121 | 27 | 2 | 46 | 166 | 318 | 432 | 2.22e-52 | 182 |
| MS.gene57264.t1 | MTR_3g102000 | 48.193 | 166 | 68 | 5 | 68 | 229 | 36 | 187 | 3.63e-36 | 133 |
| MS.gene57264.t1 | MTR_5g030560 | 72.000 | 50 | 14 | 0 | 46 | 95 | 11 | 60 | 2.73e-21 | 88.2 |
| MS.gene57264.t1 | MTR_1g093095 | 34.161 | 161 | 91 | 6 | 47 | 194 | 91 | 249 | 1.94e-19 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57264.t1 | AT1G55110 | 59.752 | 323 | 93 | 7 | 7 | 294 | 17 | 337 | 2.95e-120 | 358 |
| MS.gene57264.t1 | AT1G55110 | 59.752 | 323 | 93 | 7 | 7 | 294 | 17 | 337 | 2.95e-120 | 358 |
| MS.gene57264.t1 | AT1G55110 | 59.752 | 323 | 93 | 7 | 7 | 294 | 17 | 337 | 2.95e-120 | 358 |
| MS.gene57264.t1 | AT5G66730 | 75.000 | 196 | 41 | 3 | 10 | 203 | 4 | 193 | 4.35e-106 | 324 |
| MS.gene57264.t1 | AT3G50700 | 72.864 | 199 | 50 | 2 | 5 | 203 | 1 | 195 | 2.61e-105 | 320 |
| MS.gene57264.t1 | AT3G13810 | 69.444 | 216 | 46 | 2 | 8 | 203 | 12 | 227 | 1.73e-104 | 320 |
| MS.gene57264.t1 | AT3G13810 | 69.444 | 216 | 46 | 2 | 8 | 203 | 17 | 232 | 2.11e-104 | 320 |
| MS.gene57264.t1 | AT3G13810 | 69.444 | 216 | 46 | 2 | 8 | 203 | 17 | 232 | 2.11e-104 | 320 |
| MS.gene57264.t1 | AT3G45260 | 79.532 | 171 | 35 | 0 | 40 | 210 | 38 | 208 | 1.47e-103 | 316 |
| MS.gene57264.t1 | AT3G45260 | 79.532 | 171 | 35 | 0 | 40 | 210 | 38 | 208 | 1.47e-103 | 316 |
| MS.gene57264.t1 | AT1G03840 | 77.841 | 176 | 38 | 1 | 38 | 213 | 38 | 212 | 1.15e-102 | 315 |
| MS.gene57264.t1 | AT5G03150 | 76.966 | 178 | 38 | 1 | 40 | 214 | 52 | 229 | 1.77e-102 | 315 |
| MS.gene57264.t1 | AT2G02080 | 42.757 | 428 | 142 | 10 | 38 | 371 | 51 | 469 | 1.86e-102 | 315 |
| MS.gene57264.t1 | AT2G02080 | 42.757 | 428 | 142 | 10 | 38 | 371 | 51 | 469 | 1.86e-102 | 315 |
| MS.gene57264.t1 | AT2G02080 | 42.757 | 428 | 142 | 10 | 38 | 371 | 51 | 469 | 1.86e-102 | 315 |
| MS.gene57264.t1 | AT2G02080 | 42.757 | 428 | 142 | 10 | 38 | 371 | 51 | 469 | 1.86e-102 | 315 |
| MS.gene57264.t1 | AT3G13810 | 69.014 | 213 | 46 | 2 | 11 | 203 | 1 | 213 | 4.26e-102 | 313 |
| MS.gene57264.t1 | AT4G02670 | 47.382 | 382 | 141 | 11 | 41 | 399 | 55 | 399 | 8.02e-102 | 310 |
| MS.gene57264.t1 | AT4G02670 | 60.227 | 264 | 67 | 6 | 41 | 295 | 53 | 287 | 8.22e-102 | 310 |
| MS.gene57264.t1 | AT5G44160 | 75.000 | 188 | 46 | 1 | 24 | 211 | 20 | 206 | 2.21e-101 | 311 |
| MS.gene57264.t1 | AT1G14580 | 74.566 | 173 | 43 | 1 | 31 | 203 | 43 | 214 | 6.07e-101 | 310 |
| MS.gene57264.t1 | AT1G14580 | 74.566 | 173 | 43 | 1 | 31 | 203 | 43 | 214 | 6.07e-101 | 310 |
| MS.gene57264.t1 | AT1G14580 | 75.439 | 171 | 41 | 1 | 33 | 203 | 59 | 228 | 1.27e-100 | 309 |
| MS.gene57264.t1 | AT1G03840 | 76.705 | 176 | 38 | 2 | 38 | 213 | 38 | 210 | 7.30e-99 | 305 |
| MS.gene57264.t1 | AT2G02070 | 80.368 | 163 | 31 | 1 | 41 | 203 | 52 | 213 | 1.62e-98 | 308 |
| MS.gene57264.t1 | AT2G02070 | 80.368 | 163 | 31 | 1 | 41 | 203 | 52 | 213 | 1.62e-98 | 308 |
| MS.gene57264.t1 | AT5G60470 | 74.405 | 168 | 43 | 0 | 41 | 208 | 44 | 211 | 1.25e-96 | 298 |
| MS.gene57264.t1 | AT5G60470 | 74.405 | 168 | 43 | 0 | 41 | 208 | 40 | 207 | 1.41e-96 | 298 |
| MS.gene57264.t1 | AT3G13810 | 64.414 | 222 | 53 | 2 | 8 | 203 | 12 | 233 | 7.69e-95 | 295 |
| MS.gene57264.t1 | AT5G44160 | 79.141 | 163 | 33 | 1 | 49 | 211 | 6 | 167 | 2.45e-94 | 291 |
| MS.gene57264.t1 | AT3G13810 | 83.553 | 152 | 25 | 0 | 52 | 203 | 68 | 219 | 3.41e-94 | 293 |
| MS.gene57264.t1 | AT2G02080 | 41.646 | 401 | 131 | 10 | 65 | 371 | 1 | 392 | 4.47e-89 | 278 |
| MS.gene57264.t1 | AT2G02080 | 41.646 | 401 | 131 | 10 | 65 | 371 | 1 | 392 | 4.47e-89 | 278 |
| MS.gene57264.t1 | AT5G60470 | 73.885 | 157 | 41 | 0 | 52 | 208 | 46 | 202 | 6.84e-89 | 278 |
| MS.gene57264.t1 | AT1G68130 | 63.529 | 170 | 56 | 2 | 29 | 197 | 34 | 198 | 8.45e-75 | 241 |
| MS.gene57264.t1 | AT2G01940 | 62.722 | 169 | 61 | 2 | 28 | 195 | 32 | 199 | 3.16e-73 | 237 |
| MS.gene57264.t1 | AT1G25250 | 57.895 | 190 | 71 | 4 | 10 | 197 | 9 | 191 | 4.78e-72 | 232 |
| MS.gene57264.t1 | AT2G01940 | 61.765 | 170 | 62 | 3 | 28 | 195 | 32 | 200 | 1.07e-69 | 228 |
| MS.gene57264.t1 | AT1G25250 | 63.758 | 149 | 52 | 2 | 51 | 197 | 20 | 168 | 5.02e-68 | 221 |
| MS.gene57264.t1 | AT1G68130 | 64.286 | 112 | 39 | 1 | 87 | 197 | 1 | 112 | 1.63e-47 | 166 |
| MS.gene57264.t1 | AT1G25250 | 61.947 | 113 | 41 | 2 | 87 | 197 | 1 | 113 | 4.32e-45 | 159 |
| MS.gene57264.t1 | AT2G01940 | 62.727 | 110 | 40 | 1 | 87 | 195 | 1 | 110 | 1.64e-44 | 159 |
| MS.gene57264.t1 | AT1G34370 | 34.810 | 158 | 90 | 4 | 50 | 194 | 14 | 171 | 1.14e-22 | 98.2 |
| MS.gene57264.t1 | AT1G34370 | 34.810 | 158 | 90 | 4 | 50 | 194 | 224 | 381 | 3.87e-22 | 99.4 |
| MS.gene57264.t1 | AT1G34370 | 34.810 | 158 | 90 | 4 | 50 | 194 | 224 | 381 | 3.87e-22 | 99.4 |
| MS.gene57264.t1 | AT5G22890 | 31.395 | 172 | 103 | 4 | 36 | 194 | 185 | 354 | 4.04e-22 | 97.8 |
| MS.gene57264.t1 | AT1G13290 | 34.395 | 157 | 92 | 5 | 62 | 208 | 93 | 248 | 7.93e-20 | 90.1 |
| MS.gene57264.t1 | AT3G57670 | 32.749 | 171 | 96 | 6 | 62 | 215 | 209 | 377 | 4.38e-19 | 89.0 |
| MS.gene57264.t1 | AT3G20880 | 31.902 | 163 | 93 | 6 | 62 | 208 | 248 | 408 | 7.09e-19 | 89.0 |
| MS.gene57264.t1 | AT1G51220 | 33.803 | 142 | 83 | 5 | 62 | 194 | 170 | 309 | 1.04e-18 | 87.4 |
| MS.gene57264.t1 | AT1G08290 | 34.507 | 142 | 83 | 4 | 62 | 194 | 172 | 312 | 1.99e-17 | 83.6 |
| MS.gene57264.t1 | AT1G34790 | 32.571 | 175 | 105 | 5 | 28 | 194 | 107 | 276 | 2.17e-17 | 83.2 |
Find 85 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTAGTGCCACAAATTT+TGG | 0.055414 | 1.4:+6297556 | None:intergenic |
| TCTCATTGTTTGGCTTCTTA+TGG | 0.135453 | 1.4:-6296384 | MS.gene57264:CDS |
| GAGGAACAATATTCCCATTT+TGG | 0.167286 | 1.4:-6296201 | MS.gene57264:CDS |
| AACCATGGCTTTGATGAAAT+TGG | 0.176098 | 1.4:+6296721 | None:intergenic |
| CTCATTGTTTGGCTTCTTAT+GGG | 0.236544 | 1.4:-6296383 | MS.gene57264:CDS |
| AGTAACCATGATGGAATTTC+TGG | 0.247409 | 1.4:+6296654 | None:intergenic |
| TTTGAGTTGAAAGAATTATT+AGG | 0.263924 | 1.4:+6296582 | None:intergenic |
| AGGAAGATTTCTCTTCCTTT+TGG | 0.267985 | 1.4:+6298478 | None:intergenic |
| AGAGACTTGTTCAATATATC+TGG | 0.300064 | 1.4:-6296096 | MS.gene57264:CDS |
| GGAAACAAAGTTGTAGGGTT+AGG | 0.304016 | 1.4:+6296603 | None:intergenic |
| TGTTTGTTGCTAAGAGAGTT+TGG | 0.304831 | 1.4:+6297870 | None:intergenic |
| ATGCAAACTCACGTGCCTTC+AGG | 0.323277 | 1.4:-6296450 | MS.gene57264:CDS |
| GTTTGTTGCTAAGAGAGTTT+GGG | 0.340724 | 1.4:+6297871 | None:intergenic |
| TTCAATATATCTGGAATTGA+TGG | 0.346876 | 1.4:-6296087 | MS.gene57264:CDS |
| ACCATGGCTTTGATGAAATT+GGG | 0.358760 | 1.4:+6296722 | None:intergenic |
| ATGCCTTCACGTGAAGAAAT+AGG | 0.359256 | 1.4:-6296420 | MS.gene57264:CDS |
| TTATTAGGAAACAAAGTTGT+AGG | 0.372201 | 1.4:+6296597 | None:intergenic |
| AGGGCACTTGGTGACCTAAC+TGG | 0.384172 | 1.4:-6297677 | MS.gene57264:CDS |
| GAAACAAAGTTGTAGGGTTA+GGG | 0.390096 | 1.4:+6296604 | None:intergenic |
| AAAGCTAGCACTTGTGCCTC+AGG | 0.393473 | 1.4:+6297899 | None:intergenic |
| AGTGCTTCTTGATTCCAGTT+AGG | 0.403331 | 1.4:+6297663 | None:intergenic |
| GATAATGGTTCAAATGGGTT+GGG | 0.421089 | 1.4:+6296631 | None:intergenic |
| TGGGAGTGAGAAGAGAATAG+AGG | 0.421836 | 1.4:+6296741 | None:intergenic |
| TGATAATGGTTCAAATGGGT+TGG | 0.442086 | 1.4:+6296630 | None:intergenic |
| GGGAGTGAGAAGAGAATAGA+GGG | 0.447356 | 1.4:+6296742 | None:intergenic |
| GCACGTGAGTTTGCATTAAG+TGG | 0.454018 | 1.4:+6296457 | None:intergenic |
| TCTTGTCATCTCATGATCAT+TGG | 0.454690 | 1.4:+6296149 | None:intergenic |
| ATTTAATTACCTGGGTGGCC+AGG | 0.460193 | 1.4:+6298458 | None:intergenic |
| GCTTCTTCAGCAACCAAGAA+TGG | 0.463212 | 1.4:-6298530 | MS.gene57264:CDS |
| TGCATTAAGTGGGGTATACA+AGG | 0.466426 | 1.4:+6296468 | None:intergenic |
| GTGTTCACCATGACCCTTCA+AGG | 0.470912 | 1.4:-6297697 | MS.gene57264:CDS |
| GAGAGATAATAATAACTTTG+AGG | 0.471825 | 1.4:-6296220 | MS.gene57264:CDS |
| CGTGAAGAAATAGGAACTAC+TGG | 0.478841 | 1.4:-6296411 | MS.gene57264:CDS |
| AAAAGGAAGAGAAATCTTCC+TGG | 0.478919 | 1.4:-6298476 | MS.gene57264:CDS |
| TATTAGGAAACAAAGTTGTA+GGG | 0.486072 | 1.4:+6296598 | None:intergenic |
| AAAGCTCATTCCAAAATTTG+TGG | 0.492046 | 1.4:-6297566 | MS.gene57264:CDS |
| AAACTCTCTTAGCAACAAAC+AGG | 0.496554 | 1.4:-6297868 | MS.gene57264:CDS |
| AGATTCTTACCTTGAGAAGA+GGG | 0.498855 | 1.4:+6297514 | None:intergenic |
| GGAAGCACGGTGAGAAGAAG+TGG | 0.500086 | 1.4:-6297634 | MS.gene57264:CDS |
| CACGTGAGTTTGCATTAAGT+GGG | 0.505578 | 1.4:+6296458 | None:intergenic |
| ATCTAGAACCACAAGCCAAA+AGG | 0.506626 | 1.4:-6298493 | MS.gene57264:CDS |
| AAATTCAAAATCAAACTCCT+TGG | 0.521123 | 1.4:-6296035 | MS.gene57264:CDS |
| AGAGATGATGAAAGGTTTGT+CGG | 0.525812 | 1.4:-6298600 | None:intergenic |
| TGGTGAACACATGTTGGCTC+TGG | 0.526908 | 1.4:+6297710 | None:intergenic |
| CATGACCCTTCAAGGGCACT+TGG | 0.527782 | 1.4:-6297689 | MS.gene57264:CDS |
| TCCCAATTTCATCAAAGCCA+TGG | 0.529104 | 1.4:-6296723 | MS.gene57264:CDS |
| AACTCACGTGCCTTCAGGAA+TGG | 0.529955 | 1.4:-6296445 | MS.gene57264:CDS |
| GTTATGCAGTTCAGTCGGAT+TGG | 0.535164 | 1.4:-6297589 | MS.gene57264:CDS |
| TGCTTACCATGCAAACTCAA+AGG | 0.555451 | 1.4:+6296063 | None:intergenic |
| GTTCCTATTTCTTCACGTGA+AGG | 0.556573 | 1.4:+6296417 | None:intergenic |
| AGGTCACCAAGTGCCCTTGA+AGG | 0.557241 | 1.4:+6297683 | None:intergenic |
| TAAGACCAGAAATTCCATCA+TGG | 0.562745 | 1.4:-6296659 | MS.gene57264:CDS |
| TAAACGTTATGCAGTTCAGT+CGG | 0.567043 | 1.4:-6297594 | MS.gene57264:CDS |
| AAGATTCTTACCTTGAGAAG+AGG | 0.572213 | 1.4:+6297513 | None:intergenic |
| GATGGTCCTTTGAGTTTGCA+TGG | 0.572532 | 1.4:-6296069 | MS.gene57264:CDS |
| CAAGTGCCCTTGAAGGGTCA+TGG | 0.580343 | 1.4:+6297690 | None:intergenic |
| TTACTGCTGCTATGAGCATG+AGG | 0.586599 | 1.4:-6296260 | MS.gene57264:CDS |
| AAAAGCAACATTATAAAGAG+TGG | 0.587418 | 1.4:-6296177 | MS.gene57264:CDS |
| GTGATAGTGGTTGAAAACCA+TGG | 0.587939 | 1.4:+6296706 | None:intergenic |
| TTTGTTGCTAAGAGAGTTTG+GGG | 0.590009 | 1.4:+6297872 | None:intergenic |
| GGAGTGATAGAGATGATGAA+AGG | 0.590165 | 1.4:-6298608 | None:intergenic |
| CAAAATCAAACTCCTTGGTG+AGG | 0.595112 | 1.4:-6296030 | None:intergenic |
| AGAGAGGACATAATTTGCCA+TGG | 0.596190 | 1.4:-6297787 | MS.gene57264:CDS |
| ATTTGTGAGATTTGTAACAA+AGG | 0.598660 | 1.4:-6297842 | MS.gene57264:CDS |
| GGTCACCAAGTGCCCTTGAA+GGG | 0.601914 | 1.4:+6297684 | None:intergenic |
| AAGCTAGCACTTGTGCCTCA+GGG | 0.605138 | 1.4:+6297900 | None:intergenic |
| CTGTGATAAAACATCACAGA+AGG | 0.605312 | 1.4:+6296791 | None:intergenic |
| TGATGTGATGTATGGTAGTG+AGG | 0.613764 | 1.4:-6296307 | MS.gene57264:CDS |
| AATCTTCAGCTTCATAAGAG+AGG | 0.614070 | 1.4:-6297803 | MS.gene57264:CDS |
| TGTTCACCATGACCCTTCAA+GGG | 0.614167 | 1.4:-6297696 | MS.gene57264:CDS |
| GATGTGATGTATGGTAGTGA+GGG | 0.620627 | 1.4:-6296306 | MS.gene57264:CDS |
| AGCAACATTATAAAGAGTGG+TGG | 0.627418 | 1.4:-6296174 | MS.gene57264:CDS |
| AGAAATCTTCCTGGCCACCC+AGG | 0.633086 | 1.4:-6298467 | MS.gene57264:intron |
| TGGGTTGGGAGTAACCATGA+TGG | 0.633109 | 1.4:+6296645 | None:intergenic |
| ACTGTGGAACCCTCTTCTCA+AGG | 0.634375 | 1.4:-6297523 | MS.gene57264:intron |
| AAAGAGTATAAGTGTGACTG+TGG | 0.643514 | 1.4:-6297539 | MS.gene57264:CDS |
| TACTGCTGCTATGAGCATGA+GGG | 0.646189 | 1.4:-6296259 | MS.gene57264:CDS |
| AAAGCAGTGGCAGACATGTG+AGG | 0.650724 | 1.4:+6296540 | None:intergenic |
| GATGATGAAAGGTTTGTCGG+TGG | 0.652402 | 1.4:-6298597 | MS.gene57264:CDS |
| GAAGGCATAACCATTCCTGA+AGG | 0.663015 | 1.4:+6296435 | None:intergenic |
| ACGTGAGTTTGCATTAAGTG+GGG | 0.668311 | 1.4:+6296459 | None:intergenic |
| CCTGAATATCAGCCTCACCA+AGG | 0.685282 | 1.4:+6296018 | None:intergenic |
| GGGTCATGGTGAACACATGT+TGG | 0.693614 | 1.4:+6297704 | None:intergenic |
| ATGTGATTTAATTACCTGGG+TGG | 0.694614 | 1.4:+6298453 | None:intergenic |
| ACTGCTGCTATGAGCATGAG+GGG | 0.697079 | 1.4:-6296258 | MS.gene57264:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATCTTATTAATTTAAATT+TGG | - | chr1.4:6297131-6297150 | MS.gene57264:intron | 10.0% |
| !! | AAATACAAAGAAATTAATCA+AGG | - | chr1.4:6297482-6297501 | MS.gene57264:intron | 15.0% |
| !! | AATACAAAGAAATTAATCAA+GGG | - | chr1.4:6297483-6297502 | MS.gene57264:intron | 15.0% |
| !! | AATATAAATTGGTATATTGA+AGG | - | chr1.4:6296242-6296261 | MS.gene57264:CDS | 15.0% |
| !! | AGTAATTTAAATTTAAAGGA+AGG | + | chr1.4:6297733-6297752 | None:intergenic | 15.0% |
| !! | ATTTAAAAAAGATTACCTTA+TGG | + | chr1.4:6297318-6297337 | None:intergenic | 15.0% |
| !! | CAAGAGTAATTTAAATTTAA+AGG | + | chr1.4:6297737-6297756 | None:intergenic | 15.0% |
| !! | TTGAAAAAATATATGCATTA+TGG | + | chr1.4:6297365-6297384 | None:intergenic | 15.0% |
| !! | AAAAAAGTCCTCTAAATTAT+TGG | - | chr1.4:6296598-6296617 | MS.gene57264:CDS | 20.0% |
| !! | ATACAAAGAAATTAATCAAG+GGG | - | chr1.4:6297484-6297503 | MS.gene57264:intron | 20.0% |
| !! | ATTCCCTAAAAAAAATCAAT+AGG | + | chr1.4:6296624-6296643 | None:intergenic | 20.0% |
| !! | TAATATATCTAGAGACTAAT+CGG | + | chr1.4:6297625-6297644 | None:intergenic | 20.0% |
| !! | TACTATTAGTTGAAATTATG+AGG | + | chr1.4:6297517-6297536 | None:intergenic | 20.0% |
| !! | TTAAATATAATGTACTTTGC+AGG | - | chr1.4:6297332-6297351 | MS.gene57264:intron | 20.0% |
| !!! | AATTTATTTTTGATTGCAGA+AGG | - | chr1.4:6297792-6297811 | MS.gene57264:CDS | 20.0% |
| !!! | ATTTATTTTTGATTGCAGAA+GGG | - | chr1.4:6297793-6297812 | MS.gene57264:CDS | 20.0% |
| !!! | TAATAAAATTTGTCGCTTAT+TGG | + | chr1.4:6297677-6297696 | None:intergenic | 20.0% |
| !!! | TTGTATTTTTTCCTTGTTTA+CGG | + | chr1.4:6297470-6297489 | None:intergenic | 20.0% |
| !!! | TTTGAGTTGAAAGAATTATT+AGG | + | chr1.4:6298049-6298068 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGTTAATGCAATG+TGG | - | chr1.4:6297291-6297310 | MS.gene57264:intron | 20.0% |
| ! | AAAAGCAACATTATAAAGAG+TGG | - | chr1.4:6298451-6298470 | MS.gene57264:intron | 25.0% |
| ! | AAATTCAAAATCAAACTCCT+TGG | - | chr1.4:6298593-6298612 | MS.gene57264:CDS | 25.0% |
| ! | ACTTACCTATCAAAAAAGAT+AGG | - | chr1.4:6296341-6296360 | MS.gene57264:CDS | 25.0% |
| ! | AGTAAATGTTTAGTATGAGT+CGG | - | chr1.4:6297533-6297552 | MS.gene57264:CDS | 25.0% |
| ! | ATTGATGTGATTTAATTACC+TGG | + | chr1.4:6296182-6296201 | None:intergenic | 25.0% |
| ! | ATTTGTGAGATTTGTAACAA+AGG | - | chr1.4:6296786-6296805 | MS.gene57264:CDS | 25.0% |
| ! | CAAAAAAGATAGGGTTTAAT+TGG | - | chr1.4:6296351-6296370 | MS.gene57264:CDS | 25.0% |
| ! | CTTACCTATCAAAAAAGATA+GGG | - | chr1.4:6296342-6296361 | MS.gene57264:CDS | 25.0% |
| ! | GAGAGATAATAATAACTTTG+AGG | - | chr1.4:6298408-6298427 | MS.gene57264:intron | 25.0% |
| ! | GATACAAACAAACTAAATCA+TGG | - | chr1.4:6297162-6297181 | MS.gene57264:intron | 25.0% |
| ! | TATTAGGAAACAAAGTTGTA+GGG | + | chr1.4:6298033-6298052 | None:intergenic | 25.0% |
| ! | TTATTAGGAAACAAAGTTGT+AGG | + | chr1.4:6298034-6298053 | None:intergenic | 25.0% |
| ! | TTGATGTGATTTAATTACCT+GGG | + | chr1.4:6296181-6296200 | None:intergenic | 25.0% |
| !! | GCTAGTCTAGTAATATAAAT+TGG | - | chr1.4:6296231-6296250 | MS.gene57264:CDS | 25.0% |
| !! | GTTTTACCATTGAATATTTG+TGG | - | chr1.4:6296671-6296690 | MS.gene57264:CDS | 25.0% |
| !! | TTCAATATATCTGGAATTGA+TGG | - | chr1.4:6298541-6298560 | MS.gene57264:CDS | 25.0% |
| !!! | AATGTTGCTTTTACCAAAAT+GGG | + | chr1.4:6298443-6298462 | None:intergenic | 25.0% |
| !!! | GTTTTGATAATGGTTCAAAT+GGG | + | chr1.4:6298005-6298024 | None:intergenic | 25.0% |
| !!! | TAAACCCTATCTTTTTTGAT+AGG | + | chr1.4:6296349-6296368 | None:intergenic | 25.0% |
| !!! | TAATGTTGCTTTTACCAAAA+TGG | + | chr1.4:6298444-6298463 | None:intergenic | 25.0% |
| !!! | TGGCCTATTGATTTTTTTTA+GGG | - | chr1.4:6296618-6296637 | MS.gene57264:CDS | 25.0% |
| !!! | TGTATTTTTTCCTTGTTTAC+GGG | + | chr1.4:6297469-6297488 | None:intergenic | 25.0% |
| !!! | TGTTAGTAGTTAGTTTGTTA+GGG | + | chr1.4:6296322-6296341 | None:intergenic | 25.0% |
| !!! | TTGGCCTATTGATTTTTTTT+AGG | - | chr1.4:6296617-6296636 | MS.gene57264:CDS | 25.0% |
| AAAGCTCATTCCAAAATTTG+TGG | - | chr1.4:6297062-6297081 | MS.gene57264:intron | 30.0% | |
| AACAAATATTGCATGCTCTT+TGG | + | chr1.4:6297588-6297607 | None:intergenic | 30.0% | |
| CAATATATCACCTAAATCCA+TGG | + | chr1.4:6296416-6296435 | None:intergenic | 30.0% | |
| GCTGAAAAATGTTGTTCATT+TGG | - | chr1.4:6296693-6296712 | MS.gene57264:CDS | 30.0% | |
| GCTTTATAACTCATATCTCT+TGG | + | chr1.4:6296392-6296411 | None:intergenic | 30.0% | |
| TCAACCACTATCACTAAAAA+AGG | - | chr1.4:6297931-6297950 | MS.gene57264:intron | 30.0% | |
| TCAATAGGCCAATAATTTAG+AGG | + | chr1.4:6296609-6296628 | None:intergenic | 30.0% | |
| TGGATTTAGGTGATATATTG+TGG | - | chr1.4:6296416-6296435 | MS.gene57264:CDS | 30.0% | |
| TTGAAGGAGCTATATATAGA+AGG | - | chr1.4:6296258-6296277 | MS.gene57264:CDS | 30.0% | |
| TTTCAGCCACAAATATTCAA+TGG | + | chr1.4:6296680-6296699 | None:intergenic | 30.0% | |
| ! | AGAGACTTGTTCAATATATC+TGG | - | chr1.4:6298532-6298551 | MS.gene57264:CDS | 30.0% |
| ! | AGCTATATATAGAAGGTGTA+GGG | - | chr1.4:6296265-6296284 | MS.gene57264:CDS | 30.0% |
| ! | ATATGAGTTATAAAGCACCA+TGG | - | chr1.4:6296396-6296415 | MS.gene57264:CDS | 30.0% |
| ! | TTATAAAGCACCATGGATTT+AGG | - | chr1.4:6296403-6296422 | MS.gene57264:CDS | 30.0% |
| !! | GTGTTAGTAGTTAGTTTGTT+AGG | + | chr1.4:6296323-6296342 | None:intergenic | 30.0% |
| !! | TTTCTTTTCTTTAGCTTCCA+TGG | + | chr1.4:6296861-6296880 | None:intergenic | 30.0% |
| !!! | ACAAGAGATTTTTTGAGTCT+TGG | - | chr1.4:6298496-6298515 | MS.gene57264:CDS | 30.0% |
| !!! | GGTTTTGATAATGGTTCAAA+TGG | + | chr1.4:6298006-6298025 | None:intergenic | 30.0% |
| !!! | TACTGGTTTTTCTCATTGTT+TGG | - | chr1.4:6298234-6298253 | MS.gene57264:intron | 30.0% |
| !!! | TGTTCCTTTTTTAGTGATAG+TGG | + | chr1.4:6297938-6297957 | None:intergenic | 30.0% |
| AAAAGGAAGAGAAATCTTCC+TGG | - | chr1.4:6296152-6296171 | MS.gene57264:CDS | 35.0% | |
| AAACTCTCTTAGCAACAAAC+AGG | - | chr1.4:6296760-6296779 | MS.gene57264:CDS | 35.0% | |
| AAGATTCTTACCTTGAGAAG+AGG | + | chr1.4:6297118-6297137 | None:intergenic | 35.0% | |
| AATCTTCAGCTTCATAAGAG+AGG | - | chr1.4:6296825-6296844 | MS.gene57264:intron | 35.0% | |
| ACAAAGAAAAGTAGTAGCCA+AGG | + | chr1.4:6296564-6296583 | None:intergenic | 35.0% | |
| AGATTCTTACCTTGAGAAGA+GGG | + | chr1.4:6297117-6297136 | None:intergenic | 35.0% | |
| AGCAACATTATAAAGAGTGG+TGG | - | chr1.4:6298454-6298473 | MS.gene57264:intron | 35.0% | |
| ATGTGATTTAATTACCTGGG+TGG | + | chr1.4:6296178-6296197 | None:intergenic | 35.0% | |
| CTGTGATAAAACATCACAGA+AGG | + | chr1.4:6297840-6297859 | None:intergenic | 35.0% | |
| GAAACAAAGTTGTAGGGTTA+GGG | + | chr1.4:6298027-6298046 | None:intergenic | 35.0% | |
| TAAACGTTATGCAGTTCAGT+CGG | - | chr1.4:6297034-6297053 | MS.gene57264:intron | 35.0% | |
| TAAGACCAGAAATTCCATCA+TGG | - | chr1.4:6297969-6297988 | MS.gene57264:intron | 35.0% | |
| TCTTGTCATCTCATGATCAT+TGG | + | chr1.4:6298482-6298501 | None:intergenic | 35.0% | |
| TTAATGCAATGTGGTCCATA+AGG | - | chr1.4:6297300-6297319 | MS.gene57264:intron | 35.0% | |
| TTTGTTGCTAAGAGAGTTTG+GGG | + | chr1.4:6296759-6296778 | None:intergenic | 35.0% | |
| ! | AAAGAGTATAAGTGTGACTG+TGG | - | chr1.4:6297089-6297108 | MS.gene57264:intron | 35.0% |
| ! | AGGAAGATTTCTCTTCCTTT+TGG | + | chr1.4:6296153-6296172 | None:intergenic | 35.0% |
| ! | AGTAACCATGATGGAATTTC+TGG | + | chr1.4:6297977-6297996 | None:intergenic | 35.0% |
| ! | CTCATTGTTTGGCTTCTTAT+GGG | - | chr1.4:6298245-6298264 | MS.gene57264:intron | 35.0% |
| ! | CTCTTTAGTGCCACAAATTT+TGG | + | chr1.4:6297075-6297094 | None:intergenic | 35.0% |
| ! | CTTCTGTGATGTTTTATCAC+AGG | - | chr1.4:6297838-6297857 | MS.gene57264:CDS | 35.0% |
| ! | CTTTTGCATGATGTGATGTA+TGG | - | chr1.4:6298313-6298332 | MS.gene57264:intron | 35.0% |
| ! | GAGCTATATATAGAAGGTGT+AGG | - | chr1.4:6296264-6296283 | MS.gene57264:CDS | 35.0% |
| ! | GAGGAACAATATTCCCATTT+TGG | - | chr1.4:6298427-6298446 | MS.gene57264:intron | 35.0% |
| ! | GATAATGGTTCAAATGGGTT+GGG | + | chr1.4:6298000-6298019 | None:intergenic | 35.0% |
| ! | GTCTCTCTCTTATCTCTTTT+TGG | + | chr1.4:6297216-6297235 | None:intergenic | 35.0% |
| ! | GTTTGTTGCTAAGAGAGTTT+GGG | + | chr1.4:6296760-6296779 | None:intergenic | 35.0% |
| ! | TATCTCTTGGTGATAGATTG+TGG | + | chr1.4:6296379-6296398 | None:intergenic | 35.0% |
| ! | TCTCATTGTTTGGCTTCTTA+TGG | - | chr1.4:6298244-6298263 | MS.gene57264:intron | 35.0% |
| ! | TGTTGAAGCTTTTCCATTCT+TGG | + | chr1.4:6296114-6296133 | None:intergenic | 35.0% |
| ! | TGTTTGTTGCTAAGAGAGTT+TGG | + | chr1.4:6296761-6296780 | None:intergenic | 35.0% |
| !! | AACCATGGCTTTGATGAAAT+TGG | + | chr1.4:6297910-6297929 | None:intergenic | 35.0% |
| !! | ACCATGGCTTTGATGAAATT+GGG | + | chr1.4:6297909-6297928 | None:intergenic | 35.0% |
| !! | CTGCAAAAAGCATCACAAAT+AGG | - | chr1.4:6298112-6298131 | MS.gene57264:intron | 35.0% |
| !! | TAGGGTTAGGGTTTTGATAA+TGG | + | chr1.4:6298015-6298034 | None:intergenic | 35.0% |
| !! | TAGTTAGTTTGTTAGGGAAG+TGG | + | chr1.4:6296316-6296335 | None:intergenic | 35.0% |
| !! | TGATAATGGTTCAAATGGGT+TGG | + | chr1.4:6298001-6298020 | None:intergenic | 35.0% |
| !!! | GAATCAAGAAGCACTTTTTC+AGG | - | chr1.4:6296973-6296992 | MS.gene57264:intron | 35.0% |
| ACACTGATGCATAGTCACAT+AGG | - | chr1.4:6296521-6296540 | MS.gene57264:CDS | 40.0% | |
| ACGTGAGTTTGCATTAAGTG+GGG | + | chr1.4:6298172-6298191 | None:intergenic | 40.0% | |
| AGGTATGACATATAGTCGCT+TGG | + | chr1.4:6297713-6297732 | None:intergenic | 40.0% | |
| AGTGCTTCTTGATTCCAGTT+AGG | + | chr1.4:6296968-6296987 | None:intergenic | 40.0% | |
| ATGCCTTCACGTGAAGAAAT+AGG | - | chr1.4:6298208-6298227 | MS.gene57264:intron | 40.0% | |
| CACGTGAGTTTGCATTAAGT+GGG | + | chr1.4:6298173-6298192 | None:intergenic | 40.0% | |
| CGTGAAGAAATAGGAACTAC+TGG | - | chr1.4:6298217-6298236 | MS.gene57264:intron | 40.0% | |
| GGAAACAAAGTTGTAGGGTT+AGG | + | chr1.4:6298028-6298047 | None:intergenic | 40.0% | |
| GGTATGACATATAGTCGCTT+GGG | + | chr1.4:6297712-6297731 | None:intergenic | 40.0% | |
| GTCGCTTATTGGAGATGAAT+TGG | + | chr1.4:6297666-6297685 | None:intergenic | 40.0% | |
| TCCCAATTTCATCAAAGCCA+TGG | - | chr1.4:6297905-6297924 | MS.gene57264:intron | 40.0% | |
| TGCATTAAGTGGGGTATACA+AGG | + | chr1.4:6298163-6298182 | None:intergenic | 40.0% | |
| TGCTTACCATGCAAACTCAA+AGG | + | chr1.4:6298568-6298587 | None:intergenic | 40.0% | |
| ! | AGAGAGGACATAATTTGCCA+TGG | - | chr1.4:6296841-6296860 | MS.gene57264:intron | 40.0% |
| ! | ATCTAGAACCACAAGCCAAA+AGG | - | chr1.4:6296135-6296154 | MS.gene57264:CDS | 40.0% |
| ! | GATGTGATGTATGGTAGTGA+GGG | - | chr1.4:6298322-6298341 | MS.gene57264:intron | 40.0% |
| ! | GTTCCTATTTCTTCACGTGA+AGG | + | chr1.4:6298214-6298233 | None:intergenic | 40.0% |
| ! | TGATGTGATGTATGGTAGTG+AGG | - | chr1.4:6298321-6298340 | MS.gene57264:intron | 40.0% |
| !! | ATAAAACACCGACTCCAACA+CGG | - | chr1.4:6296447-6296466 | MS.gene57264:CDS | 40.0% |
| !! | GTGATAGTGGTTGAAAACCA+TGG | + | chr1.4:6297925-6297944 | None:intergenic | 40.0% |
| !!! | AAGCACTTTTTCAGGAAGCA+CGG | - | chr1.4:6296981-6297000 | MS.gene57264:intron | 40.0% |
| !!! | TTTCTCTTCCTTTTGGCTTG+TGG | + | chr1.4:6296146-6296165 | None:intergenic | 40.0% |
| AGAGCTTAAGCCCGTAAACA+AGG | - | chr1.4:6297456-6297475 | MS.gene57264:intron | 45.0% | |
| ATTTAATTACCTGGGTGGCC+AGG | + | chr1.4:6296173-6296192 | None:intergenic | 45.0% | |
| GCACGTGAGTTTGCATTAAG+TGG | + | chr1.4:6298174-6298193 | None:intergenic | 45.0% | |
| GCTTCTTCAGCAACCAAGAA+TGG | - | chr1.4:6296098-6296117 | MS.gene57264:CDS | 45.0% | |
| GGGAGTGAGAAGAGAATAGA+GGG | + | chr1.4:6297889-6297908 | None:intergenic | 45.0% | |
| GTTATGCAGTTCAGTCGGAT+TGG | - | chr1.4:6297039-6297058 | MS.gene57264:intron | 45.0% | |
| TACTGCTGCTATGAGCATGA+GGG | - | chr1.4:6298369-6298388 | MS.gene57264:intron | 45.0% | |
| TGGGAGTGAGAAGAGAATAG+AGG | + | chr1.4:6297890-6297909 | None:intergenic | 45.0% | |
| TGTTCACCATGACCCTTCAA+GGG | - | chr1.4:6296932-6296951 | MS.gene57264:intron | 45.0% | |
| TTACTGCTGCTATGAGCATG+AGG | - | chr1.4:6298368-6298387 | MS.gene57264:intron | 45.0% | |
| ! | GAAGGCATAACCATTCCTGA+AGG | + | chr1.4:6298196-6298215 | None:intergenic | 45.0% |
| ! | GATGGTCCTTTGAGTTTGCA+TGG | - | chr1.4:6298559-6298578 | MS.gene57264:CDS | 45.0% |
| !! | TGCTTTTTGCAGCAAAGCAG+TGG | + | chr1.4:6298104-6298123 | None:intergenic | 45.0% |
| !!! | TGGTTTTGTTTCAGACCCTG+AGG | - | chr1.4:6296713-6296732 | MS.gene57264:CDS | 45.0% |
| !! | ATAAAAAAAAATAAAAATCA+AGG | + | chr1.4:6297429-6297448 | None:intergenic | 5.0% |
| AAAGCAGTGGCAGACATGTG+AGG | + | chr1.4:6298091-6298110 | None:intergenic | 50.0% | |
| AAAGCTAGCACTTGTGCCTC+AGG | + | chr1.4:6296732-6296751 | None:intergenic | 50.0% | |
| AACTCACGTGCCTTCAGGAA+TGG | - | chr1.4:6298183-6298202 | MS.gene57264:intron | 50.0% | |
| AAGCTAGCACTTGTGCCTCA+GGG | + | chr1.4:6296731-6296750 | None:intergenic | 50.0% | |
| ACTGCTGCTATGAGCATGAG+GGG | - | chr1.4:6298370-6298389 | MS.gene57264:intron | 50.0% | |
| ACTGTGGAACCCTCTTCTCA+AGG | - | chr1.4:6297105-6297124 | MS.gene57264:intron | 50.0% | |
| ATGCAAACTCACGTGCCTTC+AGG | - | chr1.4:6298178-6298197 | MS.gene57264:intron | 50.0% | |
| GGGTCATGGTGAACACATGT+TGG | + | chr1.4:6296927-6296946 | None:intergenic | 50.0% | |
| GTCATGTCTGATGACCGTGT+TGG | + | chr1.4:6296464-6296483 | None:intergenic | 50.0% | |
| GTGTTCACCATGACCCTTCA+AGG | - | chr1.4:6296931-6296950 | MS.gene57264:intron | 50.0% | |
| TAGCACCATGAGATGCTCCT+TGG | - | chr1.4:6296544-6296563 | MS.gene57264:CDS | 50.0% | |
| TCTGATGACCGTGTTGGAGT+CGG | + | chr1.4:6296458-6296477 | None:intergenic | 50.0% | |
| ! | TGGGTTGGGAGTAACCATGA+TGG | + | chr1.4:6297986-6298005 | None:intergenic | 50.0% |
| !! | AGTAGCCAAGGAGCATCTCA+TGG | + | chr1.4:6296552-6296571 | None:intergenic | 50.0% |
| !! | TGGTGAACACATGTTGGCTC+TGG | + | chr1.4:6296921-6296940 | None:intergenic | 50.0% |
| AGAAATCTTCCTGGCCACCC+AGG | - | chr1.4:6296161-6296180 | MS.gene57264:CDS | 55.0% | |
| AGGTCACCAAGTGCCCTTGA+AGG | + | chr1.4:6296948-6296967 | None:intergenic | 55.0% | |
| CAAGTGCCCTTGAAGGGTCA+TGG | + | chr1.4:6296941-6296960 | None:intergenic | 55.0% | |
| GGTCACCAAGTGCCCTTGAA+GGG | + | chr1.4:6296947-6296966 | None:intergenic | 55.0% | |
| TAGTCGCTTGGGTAGAGCGT+TGG | + | chr1.4:6297701-6297720 | None:intergenic | 55.0% | |
| ! | AGGGCACTTGGTGACCTAAC+TGG | - | chr1.4:6296951-6296970 | MS.gene57264:intron | 55.0% |
| ! | GGAAGCACGGTGAGAAGAAG+TGG | - | chr1.4:6296994-6297013 | MS.gene57264:intron | 55.0% |
| !! | CATGACCCTTCAAGGGCACT+TGG | - | chr1.4:6296939-6296958 | MS.gene57264:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 6296032 | 6298618 | 6296032 | ID=MS.gene57264 |
| chr1.4 | mRNA | 6296032 | 6298618 | 6296032 | ID=MS.gene57264.t1;Parent=MS.gene57264 |
| chr1.4 | exon | 6298468 | 6298618 | 6298468 | ID=MS.gene57264.t1.exon1;Parent=MS.gene57264.t1 |
| chr1.4 | CDS | 6298468 | 6298618 | 6298468 | ID=cds.MS.gene57264.t1;Parent=MS.gene57264.t1 |
| chr1.4 | exon | 6297524 | 6297923 | 6297524 | ID=MS.gene57264.t1.exon2;Parent=MS.gene57264.t1 |
| chr1.4 | CDS | 6297524 | 6297923 | 6297524 | ID=cds.MS.gene57264.t1;Parent=MS.gene57264.t1 |
| chr1.4 | exon | 6296032 | 6296839 | 6296032 | ID=MS.gene57264.t1.exon3;Parent=MS.gene57264.t1 |
| chr1.4 | CDS | 6296032 | 6296839 | 6296032 | ID=cds.MS.gene57264.t1;Parent=MS.gene57264.t1 |
| Gene Sequence |
| Protein sequence |
