Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95715.t1 | XP_003605744.1 | 99.7 | 335 | 1 | 0 | 1 | 335 | 35 | 369 | 4.50E-195 | 690.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95715.t1 | Q6WUC2 | 50.0 | 340 | 161 | 5 | 1 | 334 | 18 | 354 | 5.4e-96 | 352.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95715.t1 | A0A072THI7 | 99.7 | 335 | 1 | 0 | 1 | 335 | 1 | 335 | 3.3e-195 | 690.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene95715 | 0.815131 | 1.08E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene95715 | 0.800908 | 1.16E-48 | -1.69E-46 |
| MS.gene049232 | MS.gene95715 | 0.858796 | 6.44E-63 | -1.69E-46 |
| MS.gene049285 | MS.gene95715 | 0.806657 | 7.39E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene95715 | 0.81888 | 1.56E-52 | -1.69E-46 |
| MS.gene049552 | MS.gene95715 | 0.80356 | 3.29E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene95715 | 0.8172 | 3.73E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene95715 | 0.827723 | 1.34E-54 | -1.69E-46 |
| MS.gene049656 | MS.gene95715 | 0.800591 | 1.34E-48 | -1.69E-46 |
| MS.gene049865 | MS.gene95715 | 0.849214 | 3.73E-60 | -1.69E-46 |
| MS.gene05010 | MS.gene95715 | 0.86587 | 4.32E-65 | -1.69E-46 |
| MS.gene050170 | MS.gene95715 | 0.87225 | 3.68E-67 | -1.69E-46 |
| MS.gene050216 | MS.gene95715 | 0.816917 | 4.32E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene95715 | 0.847588 | 1.05E-59 | -1.69E-46 |
| MS.gene050375 | MS.gene95715 | 0.800831 | 1.20E-48 | -1.69E-46 |
| MS.gene050496 | MS.gene95715 | 0.888998 | 3.59E-73 | -1.69E-46 |
| MS.gene050502 | MS.gene95715 | 0.872804 | 2.40E-67 | -1.69E-46 |
| MS.gene050504 | MS.gene95715 | 0.831342 | 1.76E-55 | -1.69E-46 |
| MS.gene050518 | MS.gene95715 | 0.815896 | 7.31E-52 | -1.69E-46 |
| MS.gene050520 | MS.gene95715 | 0.826319 | 2.90E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene95715 | 0.85249 | 4.46E-61 | -1.69E-46 |
| MS.gene050662 | MS.gene95715 | 0.801328 | 9.48E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene95715 | 0.834973 | 2.20E-56 | -1.69E-46 |
| MS.gene050697 | MS.gene95715 | 0.827855 | 1.24E-54 | -1.69E-46 |
| MS.gene050699 | MS.gene95715 | 0.823147 | 1.62E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene95715 | 0.834913 | 2.28E-56 | -1.69E-46 |
| MS.gene05080 | MS.gene95715 | 0.827735 | 1.33E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene95715 | 0.847693 | 9.84E-60 | -1.69E-46 |
| MS.gene050871 | MS.gene95715 | 0.848955 | 4.41E-60 | -1.69E-46 |
| MS.gene050986 | MS.gene95715 | 0.862063 | 6.61E-64 | -1.69E-46 |
| MS.gene051268 | MS.gene95715 | 0.83852 | 2.74E-57 | -1.69E-46 |
| MS.gene051509 | MS.gene95715 | 0.852411 | 4.70E-61 | -1.69E-46 |
| MS.gene051551 | MS.gene95715 | 0.814327 | 1.63E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene95715 | 0.808107 | 3.64E-50 | -1.69E-46 |
| MS.gene051941 | MS.gene95715 | 0.830138 | 3.48E-55 | -1.69E-46 |
| MS.gene052066 | MS.gene95715 | 0.835721 | 1.42E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene95715 | 0.811119 | 8.21E-51 | -1.69E-46 |
| MS.gene052346 | MS.gene95715 | 0.814935 | 1.20E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene95715 | 0.81128 | 7.58E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene95715 | 0.82109 | 4.86E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene95715 | 0.81151 | 6.75E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene95715 | 0.803776 | 2.97E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene95715 | 0.810327 | 1.22E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene95715 | 0.879019 | 1.75E-69 | -1.69E-46 |
| MS.gene052999 | MS.gene95715 | 0.801257 | 9.81E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene95715 | 0.8355 | 1.62E-56 | -1.69E-46 |
| MS.gene053207 | MS.gene95715 | 0.810316 | 1.22E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene95715 | 0.805522 | 1.28E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene95715 | 0.810607 | 1.06E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene95715 | 0.844733 | 6.30E-59 | -1.69E-46 |
| MS.gene053479 | MS.gene95715 | 0.824622 | 7.31E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene95715 | 0.832635 | 8.45E-56 | -1.69E-46 |
| MS.gene053633 | MS.gene95715 | 0.811706 | 6.12E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene95715 | 0.819671 | 1.03E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene95715 | 0.809122 | 2.21E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene95715 | 0.846977 | 1.55E-59 | -1.69E-46 |
| MS.gene054600 | MS.gene95715 | 0.831132 | 1.99E-55 | -1.69E-46 |
| MS.gene05494 | MS.gene95715 | 0.805676 | 1.19E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene95715 | 0.835581 | 1.54E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene95715 | 0.806864 | 6.69E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene95715 | 0.832506 | 9.09E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene95715 | 0.810967 | 8.86E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene95715 | 0.819229 | 1.30E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene95715 | 0.816422 | 5.58E-52 | -1.69E-46 |
| MS.gene055748 | MS.gene95715 | 0.801146 | 1.03E-48 | -1.69E-46 |
| MS.gene055750 | MS.gene95715 | 0.817945 | 2.53E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene95715 | 0.810146 | 1.33E-50 | -1.69E-46 |
| MS.gene055776 | MS.gene95715 | 0.844301 | 8.23E-59 | -1.69E-46 |
| MS.gene05589 | MS.gene95715 | 0.87568 | 2.55E-68 | -1.69E-46 |
| MS.gene056040 | MS.gene95715 | 0.804131 | 2.50E-49 | -1.69E-46 |
| MS.gene056046 | MS.gene95715 | 0.805362 | 1.38E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene95715 | 0.828551 | 8.44E-55 | -1.69E-46 |
| MS.gene056446 | MS.gene95715 | 0.829365 | 5.36E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene95715 | 0.892291 | 1.82E-74 | -1.69E-46 |
| MS.gene056510 | MS.gene95715 | 0.849209 | 3.75E-60 | -1.69E-46 |
| MS.gene056657 | MS.gene95715 | 0.809381 | 1.95E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene95715 | 0.852437 | 4.62E-61 | -1.69E-46 |
| MS.gene057019 | MS.gene95715 | 0.801611 | 8.30E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene95715 | 0.806734 | 7.12E-50 | -1.69E-46 |
| MS.gene057086 | MS.gene95715 | 0.826541 | 2.56E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene95715 | 0.810765 | 9.79E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene95715 | 0.815631 | 8.38E-52 | -1.69E-46 |
| MS.gene057872 | MS.gene95715 | 0.830254 | 3.26E-55 | -1.69E-46 |
| MS.gene057876 | MS.gene95715 | 0.818367 | 2.03E-52 | -1.69E-46 |
| MS.gene05787 | MS.gene95715 | 0.81268 | 3.75E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene95715 | 0.812293 | 4.56E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene95715 | 0.852896 | 3.42E-61 | -1.69E-46 |
| MS.gene058419 | MS.gene95715 | 0.809127 | 2.21E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene95715 | 0.814985 | 1.17E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene95715 | 0.842574 | 2.38E-58 | -1.69E-46 |
| MS.gene059023 | MS.gene95715 | 0.830354 | 3.08E-55 | -1.69E-46 |
| MS.gene059129 | MS.gene95715 | 0.856733 | 2.64E-62 | -1.69E-46 |
| MS.gene059367 | MS.gene95715 | 0.841568 | 4.39E-58 | -1.69E-46 |
| MS.gene059667 | MS.gene95715 | 0.819181 | 1.33E-52 | -1.69E-46 |
| MS.gene059680 | MS.gene95715 | 0.837513 | 4.97E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene95715 | 0.812896 | 3.37E-51 | -1.69E-46 |
| MS.gene059837 | MS.gene95715 | 0.83715 | 6.16E-57 | -1.69E-46 |
| MS.gene059865 | MS.gene95715 | 0.857074 | 2.09E-62 | -1.69E-46 |
| MS.gene06000 | MS.gene95715 | 0.860172 | 2.49E-63 | -1.69E-46 |
| MS.gene060372 | MS.gene95715 | 0.812976 | 3.23E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene95715 | 0.823416 | 1.40E-53 | -1.69E-46 |
| MS.gene060595 | MS.gene95715 | -0.813642 | 2.31E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene95715 | 0.806701 | 7.24E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene95715 | 0.807233 | 5.59E-50 | -1.69E-46 |
| MS.gene060778 | MS.gene95715 | 0.88047 | 5.35E-70 | -1.69E-46 |
| MS.gene06077 | MS.gene95715 | 0.850021 | 2.22E-60 | -1.69E-46 |
| MS.gene060835 | MS.gene95715 | 0.812962 | 3.26E-51 | -1.69E-46 |
| MS.gene06097 | MS.gene95715 | 0.80759 | 4.69E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene95715 | 0.868494 | 6.26E-66 | -1.69E-46 |
| MS.gene061218 | MS.gene95715 | 0.815879 | 7.37E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95715.t1 | MTR_4g038440 | 99.701 | 335 | 1 | 0 | 1 | 335 | 35 | 369 | 0.0 | 698 |
| MS.gene95715.t1 | MTR_0079s0070 | 99.701 | 335 | 1 | 0 | 1 | 335 | 1 | 335 | 0.0 | 697 |
| MS.gene95715.t1 | MTR_0017s0100 | 85.672 | 335 | 48 | 0 | 1 | 335 | 35 | 369 | 0.0 | 615 |
| MS.gene95715.t1 | MTR_4g038440 | 100.000 | 236 | 0 | 0 | 1 | 236 | 35 | 270 | 4.87e-176 | 489 |
| MS.gene95715.t1 | MTR_3g083620 | 39.039 | 333 | 192 | 6 | 4 | 332 | 34 | 359 | 4.97e-81 | 251 |
| MS.gene95715.t1 | MTR_5g074600 | 41.935 | 341 | 186 | 7 | 1 | 334 | 24 | 359 | 8.22e-81 | 250 |
| MS.gene95715.t1 | MTR_5g074680 | 39.466 | 337 | 194 | 6 | 3 | 333 | 27 | 359 | 1.38e-77 | 242 |
| MS.gene95715.t1 | MTR_5g074580 | 39.233 | 339 | 194 | 7 | 3 | 334 | 27 | 360 | 1.35e-72 | 229 |
| MS.gene95715.t1 | MTR_7g118300 | 41.590 | 327 | 171 | 10 | 2 | 315 | 37 | 356 | 2.70e-72 | 229 |
| MS.gene95715.t1 | MTR_7g118320 | 38.318 | 321 | 179 | 11 | 7 | 315 | 30 | 343 | 1.76e-70 | 224 |
| MS.gene95715.t1 | MTR_8g024160 | 44.118 | 306 | 149 | 10 | 26 | 315 | 10 | 309 | 9.78e-70 | 221 |
| MS.gene95715.t1 | MTR_3g092900 | 36.364 | 319 | 190 | 8 | 10 | 320 | 36 | 349 | 1.12e-67 | 216 |
| MS.gene95715.t1 | MTR_5g098170 | 38.838 | 327 | 172 | 11 | 10 | 320 | 35 | 349 | 3.72e-67 | 215 |
| MS.gene95715.t1 | MTR_8g068750 | 38.602 | 329 | 183 | 11 | 9 | 324 | 47 | 369 | 2.83e-65 | 211 |
| MS.gene95715.t1 | MTR_4g079160 | 36.311 | 347 | 190 | 8 | 3 | 334 | 25 | 355 | 1.22e-64 | 208 |
| MS.gene95715.t1 | MTR_5g074540 | 36.905 | 336 | 188 | 7 | 3 | 334 | 26 | 341 | 1.95e-64 | 207 |
| MS.gene95715.t1 | MTR_1g076940 | 36.628 | 344 | 202 | 9 | 1 | 334 | 24 | 361 | 7.59e-64 | 206 |
| MS.gene95715.t1 | MTR_5g074610 | 36.873 | 339 | 177 | 8 | 1 | 334 | 20 | 326 | 2.21e-63 | 204 |
| MS.gene95715.t1 | MTR_0591s0010 | 36.593 | 317 | 184 | 9 | 10 | 315 | 48 | 358 | 5.27e-61 | 199 |
| MS.gene95715.t1 | MTR_7g014510 | 35.447 | 347 | 198 | 9 | 1 | 334 | 24 | 357 | 5.12e-59 | 194 |
| MS.gene95715.t1 | MTR_8g068870 | 35.849 | 318 | 187 | 9 | 9 | 315 | 33 | 344 | 7.27e-59 | 194 |
| MS.gene95715.t1 | MTR_8g068690 | 35.202 | 321 | 191 | 9 | 10 | 319 | 47 | 361 | 1.63e-58 | 193 |
| MS.gene95715.t1 | MTR_7g024500 | 34.441 | 331 | 205 | 7 | 4 | 331 | 26 | 347 | 1.48e-57 | 190 |
| MS.gene95715.t1 | MTR_7g024520 | 34.639 | 332 | 205 | 6 | 3 | 331 | 25 | 347 | 2.51e-57 | 189 |
| MS.gene95715.t1 | MTR_4g088345 | 34.024 | 338 | 214 | 7 | 1 | 334 | 24 | 356 | 3.55e-57 | 189 |
| MS.gene95715.t1 | MTR_4g088340 | 34.320 | 338 | 213 | 7 | 1 | 334 | 1 | 333 | 7.68e-57 | 187 |
| MS.gene95715.t1 | MTR_6g078850 | 35.000 | 320 | 191 | 9 | 8 | 315 | 50 | 364 | 2.01e-56 | 191 |
| MS.gene95715.t1 | MTR_7g014570 | 35.015 | 337 | 202 | 8 | 4 | 334 | 27 | 352 | 4.02e-56 | 186 |
| MS.gene95715.t1 | MTR_4g033150 | 35.191 | 341 | 207 | 8 | 4 | 334 | 27 | 363 | 1.13e-53 | 180 |
| MS.gene95715.t1 | MTR_4g088200 | 33.038 | 339 | 215 | 8 | 4 | 334 | 27 | 361 | 1.69e-53 | 179 |
| MS.gene95715.t1 | MTR_3g021440 | 34.688 | 320 | 195 | 10 | 10 | 321 | 43 | 356 | 1.70e-51 | 174 |
| MS.gene95715.t1 | MTR_7g012090 | 35.866 | 329 | 186 | 10 | 10 | 321 | 41 | 361 | 4.06e-51 | 174 |
| MS.gene95715.t1 | MTR_8g068570 | 49.708 | 171 | 83 | 3 | 133 | 302 | 150 | 318 | 6.05e-51 | 172 |
| MS.gene95715.t1 | MTR_2g055940 | 35.514 | 321 | 186 | 10 | 10 | 318 | 35 | 346 | 8.16e-51 | 172 |
| MS.gene95715.t1 | MTR_4g033015 | 35.088 | 342 | 208 | 8 | 3 | 334 | 26 | 363 | 1.13e-50 | 172 |
| MS.gene95715.t1 | MTR_7g012070 | 36.474 | 329 | 184 | 10 | 10 | 321 | 41 | 361 | 3.01e-50 | 171 |
| MS.gene95715.t1 | MTR_1g096310 | 34.985 | 323 | 192 | 8 | 10 | 320 | 41 | 357 | 7.99e-50 | 170 |
| MS.gene95715.t1 | MTR_7g012020 | 35.185 | 324 | 190 | 11 | 10 | 321 | 40 | 355 | 9.30e-50 | 170 |
| MS.gene95715.t1 | MTR_4g033200 | 34.795 | 342 | 209 | 8 | 3 | 334 | 26 | 363 | 1.23e-49 | 169 |
| MS.gene95715.t1 | MTR_1g036510 | 33.333 | 324 | 196 | 11 | 10 | 320 | 52 | 368 | 2.34e-49 | 169 |
| MS.gene95715.t1 | MTR_4g088190 | 34.694 | 343 | 207 | 9 | 4 | 334 | 27 | 364 | 5.38e-49 | 168 |
| MS.gene95715.t1 | MTR_7g012040 | 35.093 | 322 | 192 | 11 | 10 | 321 | 40 | 354 | 1.35e-48 | 167 |
| MS.gene95715.t1 | MTR_1g036490 | 32.743 | 339 | 206 | 12 | 10 | 333 | 38 | 369 | 1.64e-48 | 167 |
| MS.gene95715.t1 | MTR_1g036460 | 33.642 | 324 | 195 | 11 | 10 | 320 | 38 | 354 | 4.39e-48 | 166 |
| MS.gene95715.t1 | MTR_7g011990 | 33.951 | 324 | 191 | 11 | 10 | 321 | 41 | 353 | 2.63e-47 | 164 |
| MS.gene95715.t1 | MTR_3g021430 | 32.500 | 320 | 202 | 9 | 10 | 321 | 30 | 343 | 3.35e-47 | 163 |
| MS.gene95715.t1 | MTR_3g096050 | 32.523 | 329 | 212 | 8 | 9 | 331 | 31 | 355 | 5.88e-47 | 162 |
| MS.gene95715.t1 | MTR_2g072790 | 33.739 | 329 | 207 | 9 | 9 | 331 | 28 | 351 | 6.14e-47 | 162 |
| MS.gene95715.t1 | MTR_7g011900 | 34.056 | 323 | 193 | 10 | 10 | 320 | 41 | 355 | 7.28e-47 | 162 |
| MS.gene95715.t1 | MTR_8g068730 | 33.540 | 322 | 157 | 10 | 9 | 315 | 47 | 326 | 8.27e-45 | 156 |
| MS.gene95715.t1 | MTR_4g033170 | 32.647 | 340 | 213 | 8 | 3 | 334 | 26 | 357 | 7.46e-42 | 149 |
| MS.gene95715.t1 | MTR_3g096070 | 31.307 | 329 | 193 | 10 | 9 | 331 | 31 | 332 | 4.65e-40 | 144 |
| MS.gene95715.t1 | MTR_4g033085 | 32.047 | 337 | 219 | 7 | 3 | 334 | 26 | 357 | 2.37e-38 | 140 |
| MS.gene95715.t1 | MTR_8g068690 | 33.333 | 240 | 145 | 7 | 10 | 239 | 47 | 281 | 1.63e-37 | 135 |
| MS.gene95715.t1 | MTR_8g068600 | 35.193 | 233 | 136 | 7 | 15 | 237 | 27 | 254 | 4.04e-36 | 132 |
| MS.gene95715.t1 | MTR_8g068740 | 33.594 | 256 | 117 | 7 | 8 | 250 | 46 | 261 | 1.89e-34 | 127 |
| MS.gene95715.t1 | MTR_1g050220 | 40.373 | 161 | 79 | 6 | 172 | 329 | 152 | 298 | 1.14e-31 | 120 |
| MS.gene95715.t1 | MTR_3g096050 | 33.190 | 232 | 148 | 5 | 9 | 236 | 31 | 259 | 2.61e-31 | 119 |
| MS.gene95715.t1 | MTR_8g068620 | 48.673 | 113 | 57 | 1 | 127 | 239 | 2 | 113 | 3.80e-30 | 111 |
| MS.gene95715.t1 | MTR_7g012020 | 34.025 | 241 | 146 | 7 | 9 | 240 | 39 | 275 | 6.84e-30 | 116 |
| MS.gene95715.t1 | MTR_1g076930 | 32.051 | 234 | 150 | 6 | 8 | 236 | 8 | 237 | 2.64e-29 | 113 |
| MS.gene95715.t1 | MTR_4g025570 | 46.875 | 96 | 51 | 0 | 238 | 333 | 122 | 217 | 7.94e-27 | 105 |
| MS.gene95715.t1 | MTR_1g036510 | 30.802 | 237 | 151 | 6 | 10 | 236 | 52 | 285 | 2.83e-26 | 106 |
| MS.gene95715.t1 | MTR_0794s0020 | 30.531 | 226 | 147 | 5 | 4 | 222 | 27 | 249 | 1.75e-22 | 94.7 |
| MS.gene95715.t1 | MTR_7g012020 | 32.558 | 215 | 132 | 7 | 10 | 215 | 40 | 250 | 1.21e-21 | 92.8 |
| MS.gene95715.t1 | MTR_1g036510 | 27.778 | 216 | 143 | 6 | 10 | 215 | 52 | 264 | 2.61e-17 | 80.9 |
| MS.gene95715.t1 | MTR_8g068760 | 37.097 | 124 | 54 | 6 | 210 | 324 | 117 | 225 | 2.78e-15 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95715.t1 | AT5G54160 | 38.318 | 321 | 185 | 7 | 8 | 321 | 34 | 348 | 8.87e-73 | 229 |
| MS.gene95715.t1 | AT1G77520 | 37.574 | 338 | 190 | 9 | 10 | 331 | 46 | 378 | 9.14e-65 | 209 |
| MS.gene95715.t1 | AT4G35160 | 34.393 | 346 | 206 | 6 | 4 | 333 | 40 | 380 | 1.22e-61 | 201 |
| MS.gene95715.t1 | AT1G51990 | 32.840 | 338 | 211 | 9 | 8 | 334 | 30 | 362 | 6.76e-57 | 189 |
| MS.gene95715.t1 | AT1G33030 | 36.760 | 321 | 186 | 11 | 10 | 320 | 23 | 336 | 9.09e-56 | 185 |
| MS.gene95715.t1 | AT1G63140 | 36.364 | 330 | 189 | 9 | 8 | 321 | 44 | 368 | 9.23e-55 | 184 |
| MS.gene95715.t1 | AT1G63140 | 36.474 | 329 | 188 | 9 | 9 | 321 | 65 | 388 | 1.42e-54 | 184 |
| MS.gene95715.t1 | AT1G51990 | 32.544 | 338 | 212 | 9 | 8 | 334 | 30 | 362 | 1.88e-54 | 182 |
| MS.gene95715.t1 | AT1G77530 | 37.353 | 340 | 192 | 10 | 8 | 331 | 44 | 378 | 2.33e-54 | 182 |
| MS.gene95715.t1 | AT4G35150 | 30.294 | 340 | 185 | 7 | 4 | 333 | 26 | 323 | 7.81e-53 | 177 |
| MS.gene95715.t1 | AT5G53810 | 34.694 | 343 | 196 | 10 | 10 | 335 | 42 | 373 | 3.19e-52 | 177 |
| MS.gene95715.t1 | AT3G53140 | 34.821 | 336 | 201 | 10 | 8 | 331 | 27 | 356 | 1.37e-49 | 169 |
| MS.gene95715.t1 | AT1G62900 | 45.026 | 191 | 101 | 3 | 133 | 321 | 4 | 192 | 2.14e-48 | 162 |
| MS.gene95715.t1 | AT5G37170 | 36.052 | 233 | 142 | 5 | 104 | 331 | 1 | 231 | 6.43e-46 | 156 |
| MS.gene95715.t1 | AT1G21130 | 35.207 | 338 | 197 | 13 | 10 | 333 | 42 | 371 | 6.72e-46 | 160 |
| MS.gene95715.t1 | AT1G21100 | 35.207 | 338 | 197 | 12 | 10 | 333 | 42 | 371 | 1.24e-45 | 159 |
| MS.gene95715.t1 | AT5G37170 | 32.792 | 308 | 176 | 10 | 29 | 331 | 50 | 331 | 4.71e-45 | 157 |
| MS.gene95715.t1 | AT1G21120 | 34.320 | 338 | 200 | 12 | 10 | 333 | 42 | 371 | 4.91e-44 | 155 |
| MS.gene95715.t1 | AT1G21110 | 33.728 | 338 | 202 | 12 | 10 | 333 | 42 | 371 | 1.32e-43 | 154 |
| MS.gene95715.t1 | AT1G21120 | 34.320 | 338 | 200 | 12 | 10 | 333 | 90 | 419 | 1.40e-43 | 155 |
| MS.gene95715.t1 | AT1G76790 | 34.954 | 329 | 189 | 12 | 10 | 321 | 32 | 352 | 2.31e-41 | 148 |
| MS.gene95715.t1 | AT5G37170 | 39.560 | 182 | 105 | 4 | 153 | 331 | 4 | 183 | 7.78e-41 | 141 |
| MS.gene95715.t1 | AT1G33030 | 35.745 | 235 | 138 | 8 | 10 | 236 | 23 | 252 | 4.45e-31 | 118 |
| MS.gene95715.t1 | AT1G33030 | 35.745 | 235 | 138 | 8 | 10 | 236 | 23 | 252 | 6.13e-31 | 118 |
| MS.gene95715.t1 | AT1G63140 | 32.780 | 241 | 144 | 7 | 10 | 236 | 66 | 302 | 1.51e-26 | 107 |
| MS.gene95715.t1 | AT1G21130 | 33.891 | 239 | 140 | 10 | 10 | 236 | 42 | 274 | 3.19e-21 | 92.4 |
| MS.gene95715.t1 | AT1G63140 | 30.556 | 216 | 132 | 7 | 10 | 211 | 66 | 277 | 9.42e-17 | 79.7 |
| MS.gene95715.t1 | AT1G77530 | 32.727 | 220 | 130 | 8 | 10 | 215 | 46 | 261 | 6.80e-15 | 74.3 |
Find 78 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAACCAAAGACTTAATT+TGG | 0.166048 | 4.1:+55049846 | None:intergenic |
| GTAAATGGTTCATTTCCTTC+TGG | 0.225351 | 4.1:+55049401 | None:intergenic |
| GTTTAACCAAATTAAGTCTT+TGG | 0.272207 | 4.1:-55049852 | MS.gene95715:CDS |
| TGGGTGATACCATCAAAATT+AGG | 0.296621 | 4.1:+55049725 | None:intergenic |
| AAAATGGCACTGCTTTCTTT+AGG | 0.298524 | 4.1:-55050000 | MS.gene95715:CDS |
| GCTATCCCAGTGTCGGTAAA+TGG | 0.307296 | 4.1:+55049386 | None:intergenic |
| GGGTGATACCATCAAAATTA+GGG | 0.313744 | 4.1:+55049726 | None:intergenic |
| TAAATGGTTCATTTCCTTCT+GGG | 0.333897 | 4.1:+55049402 | None:intergenic |
| GATTGACACGTGCATCAAAA+TGG | 0.338738 | 4.1:-55050132 | MS.gene95715:CDS |
| CTTAAAAGTAGAGTGGAATC+AGG | 0.364299 | 4.1:+55050226 | None:intergenic |
| GGCAGTGGATTCTTCATGAT+TGG | 0.364458 | 4.1:-55049517 | MS.gene95715:intron |
| ATTCTGCACAATTTGAGTTA+AGG | 0.365186 | 4.1:+55050267 | None:intergenic |
| TAAAGATATTGAAGAATTGT+AGG | 0.382866 | 4.1:-55049478 | MS.gene95715:CDS |
| AGTCTTTGGTTGATGTTGGT+GGG | 0.383991 | 4.1:-55049838 | MS.gene95715:CDS |
| GTGTCGAGGGCTGTTATTGC+TGG | 0.396054 | 4.1:-55049887 | MS.gene95715:CDS |
| GTCTTTGGTTGATGTTGGTG+GGG | 0.401604 | 4.1:-55049837 | MS.gene95715:CDS |
| ACAATTTGAGTTAAGGATAG+TGG | 0.413559 | 4.1:+55050274 | None:intergenic |
| AAGTCTTTGGTTGATGTTGG+TGG | 0.413586 | 4.1:-55049839 | MS.gene95715:CDS |
| ATTAGTGAAATTATAAAAGA+AGG | 0.414681 | 4.1:-55050028 | MS.gene95715:CDS |
| AAGAAAGAACTGAAGAGAAC+TGG | 0.424963 | 4.1:-55049325 | MS.gene95715:CDS |
| GCCATAACGGTCTATAATAT+CGG | 0.426995 | 4.1:+55050300 | None:intergenic |
| CATCTTCCATGAATTTAGAC+TGG | 0.428951 | 4.1:+55049221 | None:intergenic |
| TTAGCAGGGTTCAAATGAAA+AGG | 0.429287 | 4.1:+55050055 | None:intergenic |
| ATTTCACTAATAAAGTTAGC+AGG | 0.435103 | 4.1:+55050040 | None:intergenic |
| GTTATTGCTGGATACAAAGA+TGG | 0.437111 | 4.1:-55049875 | MS.gene95715:CDS |
| ACTGCTTTCTTTAGGTGTCA+TGG | 0.450664 | 4.1:-55049992 | MS.gene95715:CDS |
| CATGAACAATTTGAAATGAC+GGG | 0.462928 | 4.1:-55049968 | MS.gene95715:CDS |
| AGGATAGTGGTTTGCCATAA+CGG | 0.463766 | 4.1:+55050287 | None:intergenic |
| AAGGCAATACCAGAGAAAAC+AGG | 0.476074 | 4.1:-55049455 | MS.gene95715:CDS |
| TCTTTGGTTGATGTTGGTGG+GGG | 0.478335 | 4.1:-55049836 | MS.gene95715:CDS |
| GCCGATATTATAGACCGTTA+TGG | 0.483784 | 4.1:-55050301 | MS.gene95715:CDS |
| ATGTTGCTTGCTCACAATGC+TGG | 0.486841 | 4.1:-55049353 | MS.gene95715:CDS |
| TAACTTTGATTTGCCTCATG+TGG | 0.490029 | 4.1:-55049759 | MS.gene95715:CDS |
| AAACATGTCTCCTCCAACAT+GGG | 0.498630 | 4.1:+55049706 | None:intergenic |
| TTAAAAGTAGAGTGGAATCA+GGG | 0.508759 | 4.1:+55050227 | None:intergenic |
| TTTGATGGTATCACCCATGT+TGG | 0.511129 | 4.1:-55049719 | MS.gene95715:CDS |
| GATCATTGTGGATCATGTAT+TGG | 0.519603 | 4.1:-55049426 | MS.gene95715:CDS |
| AATGAACCATTTACCGACAC+TGG | 0.520366 | 4.1:-55049392 | MS.gene95715:CDS |
| TGACTTGTTCAACCAAGGTA+TGG | 0.521535 | 4.1:-55049927 | MS.gene95715:CDS |
| GATGGTATCACCCATGTTGG+AGG | 0.521547 | 4.1:-55049716 | MS.gene95715:CDS |
| ATTAAGTCTTTGGTTGATGT+TGG | 0.530572 | 4.1:-55049842 | MS.gene95715:CDS |
| ACAATTTGAAATGACGGGGT+TGG | 0.533144 | 4.1:-55049963 | MS.gene95715:CDS |
| TCTTCAATATCTTTATGCAA+TGG | 0.534210 | 4.1:+55049486 | None:intergenic |
| CAAACATGTCTCCTCCAACA+TGG | 0.536952 | 4.1:+55049705 | None:intergenic |
| AAATACTTATTCAACGAGAC+AGG | 0.536963 | 4.1:-55049302 | MS.gene95715:CDS |
| TTTCACTAATAAAGTTAGCA+GGG | 0.540307 | 4.1:+55050041 | None:intergenic |
| TGCTGATGCTATTTACATGA+AGG | 0.545789 | 4.1:-55049669 | MS.gene95715:intron |
| TAGCAGGGTTCAAATGAAAA+GGG | 0.549937 | 4.1:+55050056 | None:intergenic |
| TCATGAACAATTTGAAATGA+CGG | 0.554113 | 4.1:-55049969 | MS.gene95715:CDS |
| TTATTGCTGGATACAAAGAT+GGG | 0.557554 | 4.1:-55049874 | MS.gene95715:CDS |
| GATATTGAAGAATTGTAGGA+AGG | 0.557857 | 4.1:-55049474 | MS.gene95715:CDS |
| TTTAAGAGTAATGAGAGTCA+TGG | 0.559249 | 4.1:-55050209 | MS.gene95715:CDS |
| ATCTTCCATGAATTTAGACT+GGG | 0.572590 | 4.1:+55049222 | None:intergenic |
| CACCGCTAGAATTGTGTCGA+GGG | 0.576078 | 4.1:-55049900 | MS.gene95715:CDS |
| TAGCGGTGCAAACCATACCT+TGG | 0.586631 | 4.1:+55049915 | None:intergenic |
| CATTACTCTTAAAAGTAGAG+TGG | 0.588009 | 4.1:+55050219 | None:intergenic |
| GCACCGCTAGAATTGTGTCG+AGG | 0.594031 | 4.1:-55049901 | MS.gene95715:CDS |
| ATGTAAATAGCATCAGCACT+AGG | 0.596076 | 4.1:+55049674 | None:intergenic |
| GTCAAATGCTATCCCAGTGT+CGG | 0.602762 | 4.1:+55049379 | None:intergenic |
| TGCTCTGCCATGCATCATTG+AGG | 0.607068 | 4.1:-55049249 | MS.gene95715:CDS |
| ATGAACCATTTACCGACACT+GGG | 0.609768 | 4.1:-55049391 | MS.gene95715:CDS |
| AAGTTAATAGCTTGAATGTG+AGG | 0.610156 | 4.1:+55049776 | None:intergenic |
| TACAATGACTTGTTCAACCA+AGG | 0.624846 | 4.1:-55049932 | MS.gene95715:CDS |
| TTGCTTGCTCACAATGCTGG+TGG | 0.636119 | 4.1:-55049350 | MS.gene95715:CDS |
| CAATCCGTAGAGAATTTCGC+CGG | 0.636485 | 4.1:+55050150 | None:intergenic |
| GGGTATCGGAGGATCTCTCT+CGG | 0.640837 | 4.1:-55049816 | MS.gene95715:CDS |
| TGATTCTCTAGCAACAACAT+TGG | 0.649459 | 4.1:+55050079 | None:intergenic |
| GATCATGTATTGGACCCAGA+AGG | 0.652817 | 4.1:-55049416 | MS.gene95715:CDS |
| GAAACCGGCGAAATTCTCTA+CGG | 0.654879 | 4.1:-55050154 | MS.gene95715:CDS |
| GGGAATGCCTCAATGATGCA+TGG | 0.663145 | 4.1:+55049242 | None:intergenic |
| AACAGGAAAAGTGATCATTG+TGG | 0.665184 | 4.1:-55049438 | MS.gene95715:CDS |
| TAAAAGTAGAGTGGAATCAG+GGG | 0.667415 | 4.1:+55050228 | None:intergenic |
| AGTAGAGTGGAATCAGGGGA+AGG | 0.670234 | 4.1:+55050232 | None:intergenic |
| ATGAACAATTTGAAATGACG+GGG | 0.676832 | 4.1:-55049967 | MS.gene95715:CDS |
| GGTGATACCATCAAAATTAG+GGG | 0.681590 | 4.1:+55049727 | None:intergenic |
| AGCCCTCGACACAATTCTAG+CGG | 0.693934 | 4.1:+55049898 | None:intergenic |
| GATACCATCAAAATTAGGGG+CGG | 0.701505 | 4.1:+55049730 | None:intergenic |
| GGGGCGGTTGAAACCACATG+AGG | 0.705484 | 4.1:+55049746 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACACATGAATTTAATTATAA+TGG | - | chr4.1:55050000-55050019 | MS.gene95715:CDS | 15.0% |
| !! | ATTAGTGAAATTATAAAAGA+AGG | - | chr4.1:55049562-55049581 | MS.gene95715:intron | 15.0% |
| !!! | TTAAAATTGACTTTATCTTT+GGG | - | chr4.1:55050045-55050064 | MS.gene95715:CDS | 15.0% |
| !!! | TTTAAAATTGACTTTATCTT+TGG | - | chr4.1:55050044-55050063 | MS.gene95715:CDS | 15.0% |
| !! | TAAAGATATTGAAGAATTGT+AGG | - | chr4.1:55050112-55050131 | MS.gene95715:CDS | 20.0% |
| !! | TTTCAAATTTATTGTGCATT+TGG | - | chr4.1:55049972-55049991 | MS.gene95715:CDS | 20.0% |
| ! | ATTTCACTAATAAAGTTAGC+AGG | + | chr4.1:55049553-55049572 | None:intergenic | 25.0% |
| ! | GTTTAACCAAATTAAGTCTT+TGG | - | chr4.1:55049738-55049757 | MS.gene95715:CDS | 25.0% |
| ! | TCTTCAATATCTTTATGCAA+TGG | + | chr4.1:55050107-55050126 | None:intergenic | 25.0% |
| ! | TTTCACTAATAAAGTTAGCA+GGG | + | chr4.1:55049552-55049571 | None:intergenic | 25.0% |
| !! | ATAAAAGAAGGCACAAAAAA+TGG | - | chr4.1:55049574-55049593 | MS.gene95715:intron | 25.0% |
| !! | TCATGAACAATTTGAAATGA+CGG | - | chr4.1:55049621-55049640 | MS.gene95715:intron | 25.0% |
| AAATACTTATTCAACGAGAC+AGG | - | chr4.1:55050288-55050307 | MS.gene95715:CDS | 30.0% | |
| AAGTTAATAGCTTGAATGTG+AGG | + | chr4.1:55049817-55049836 | None:intergenic | 30.0% | |
| ACAAGACACAAAAATGACAT+TGG | - | chr4.1:55049486-55049505 | MS.gene95715:CDS | 30.0% | |
| CATCAACCAAAGACTTAATT+TGG | + | chr4.1:55049747-55049766 | None:intergenic | 30.0% | |
| CATTACTCTTAAAAGTAGAG+TGG | + | chr4.1:55049374-55049393 | None:intergenic | 30.0% | |
| GATATTGAAGAATTGTAGGA+AGG | - | chr4.1:55050116-55050135 | MS.gene95715:CDS | 30.0% | |
| TAAATGGTTCATTTCCTTCT+GGG | + | chr4.1:55050191-55050210 | None:intergenic | 30.0% | |
| TTAAAAGTAGAGTGGAATCA+GGG | + | chr4.1:55049366-55049385 | None:intergenic | 30.0% | |
| TTATTGCTGGATACAAAGAT+GGG | - | chr4.1:55049716-55049735 | MS.gene95715:CDS | 30.0% | |
| TTTAAGAGTAATGAGAGTCA+TGG | - | chr4.1:55049381-55049400 | MS.gene95715:CDS | 30.0% | |
| ! | ACAATTTGAGTTAAGGATAG+TGG | + | chr4.1:55049319-55049338 | None:intergenic | 30.0% |
| ! | ATGAACAATTTGAAATGACG+GGG | - | chr4.1:55049623-55049642 | MS.gene95715:intron | 30.0% |
| ! | ATTAAGTCTTTGGTTGATGT+TGG | - | chr4.1:55049748-55049767 | MS.gene95715:CDS | 30.0% |
| ! | ATTCTGCACAATTTGAGTTA+AGG | + | chr4.1:55049326-55049345 | None:intergenic | 30.0% |
| ! | CATGAACAATTTGAAATGAC+GGG | - | chr4.1:55049622-55049641 | MS.gene95715:intron | 30.0% |
| !!! | ATGTCATTTTTGTGTCTTGT+AGG | + | chr4.1:55049486-55049505 | None:intergenic | 30.0% |
| !!! | ATTTTGATGATGTTGTAACG+AGG | + | chr4.1:55050318-55050337 | None:intergenic | 30.0% |
| !!! | TTTTGATGATGTTGTAACGA+GGG | + | chr4.1:55050317-55050336 | None:intergenic | 30.0% |
| AAAATGGCACTGCTTTCTTT+AGG | - | chr4.1:55049590-55049609 | MS.gene95715:intron | 35.0% | |
| AACAGGAAAAGTGATCATTG+TGG | - | chr4.1:55050152-55050171 | MS.gene95715:CDS | 35.0% | |
| AAGAAAGAACTGAAGAGAAC+TGG | - | chr4.1:55050265-55050284 | MS.gene95715:CDS | 35.0% | |
| AGTGCAGAAAAATCAGAAAC+CGG | - | chr4.1:55049421-55049440 | MS.gene95715:CDS | 35.0% | |
| ATGTAAATAGCATCAGCACT+AGG | + | chr4.1:55049919-55049938 | None:intergenic | 35.0% | |
| CTTAAAAGTAGAGTGGAATC+AGG | + | chr4.1:55049367-55049386 | None:intergenic | 35.0% | |
| GATCATTGTGGATCATGTAT+TGG | - | chr4.1:55050164-55050183 | MS.gene95715:CDS | 35.0% | |
| GCCATAACGGTCTATAATAT+CGG | + | chr4.1:55049293-55049312 | None:intergenic | 35.0% | |
| GGGTGATACCATCAAAATTA+GGG | + | chr4.1:55049867-55049886 | None:intergenic | 35.0% | |
| GGTGATACCATCAAAATTAG+GGG | + | chr4.1:55049866-55049885 | None:intergenic | 35.0% | |
| GTAAATGGTTCATTTCCTTC+TGG | + | chr4.1:55050192-55050211 | None:intergenic | 35.0% | |
| GTTATTGCTGGATACAAAGA+TGG | - | chr4.1:55049715-55049734 | MS.gene95715:CDS | 35.0% | |
| TAAAAGTAGAGTGGAATCAG+GGG | + | chr4.1:55049365-55049384 | None:intergenic | 35.0% | |
| TAGCAGGGTTCAAATGAAAA+GGG | + | chr4.1:55049537-55049556 | None:intergenic | 35.0% | |
| TGACTTTATCTTTGGGTGAA+TGG | - | chr4.1:55050052-55050071 | MS.gene95715:CDS | 35.0% | |
| TGATTCTCTAGCAACAACAT+TGG | + | chr4.1:55049514-55049533 | None:intergenic | 35.0% | |
| TGGGTGATACCATCAAAATT+AGG | + | chr4.1:55049868-55049887 | None:intergenic | 35.0% | |
| TGGTGACACTCTTCAAAATA+TGG | - | chr4.1:55050020-55050039 | MS.gene95715:CDS | 35.0% | |
| TTAGCAGGGTTCAAATGAAA+AGG | + | chr4.1:55049538-55049557 | None:intergenic | 35.0% | |
| ! | TGCTGATGCTATTTACATGA+AGG | - | chr4.1:55049921-55049940 | MS.gene95715:CDS | 35.0% |
| !! | ATCACTTTTCCTGTTTTCTC+TGG | + | chr4.1:55050147-55050166 | None:intergenic | 35.0% |
| !! | TAACTTTGATTTGCCTCATG+TGG | - | chr4.1:55049831-55049850 | MS.gene95715:CDS | 35.0% |
| !! | TACAATGACTTGTTCAACCA+AGG | - | chr4.1:55049658-55049677 | MS.gene95715:intron | 35.0% |
| AAACATGTCTCCTCCAACAT+GGG | + | chr4.1:55049887-55049906 | None:intergenic | 40.0% | |
| AAGGCAATACCAGAGAAAAC+AGG | - | chr4.1:55050135-55050154 | MS.gene95715:CDS | 40.0% | |
| AATGAACCATTTACCGACAC+TGG | - | chr4.1:55050198-55050217 | MS.gene95715:CDS | 40.0% | |
| ACTGCTTTCTTTAGGTGTCA+TGG | - | chr4.1:55049598-55049617 | MS.gene95715:intron | 40.0% | |
| ATGAACCATTTACCGACACT+GGG | - | chr4.1:55050199-55050218 | MS.gene95715:CDS | 40.0% | |
| GATACCATCAAAATTAGGGG+CGG | + | chr4.1:55049863-55049882 | None:intergenic | 40.0% | |
| GATTGACACGTGCATCAAAA+TGG | - | chr4.1:55049458-55049477 | MS.gene95715:CDS | 40.0% | |
| GCCGATATTATAGACCGTTA+TGG | - | chr4.1:55049289-55049308 | MS.gene95715:CDS | 40.0% | |
| ! | AAGTCTTTGGTTGATGTTGG+TGG | - | chr4.1:55049751-55049770 | MS.gene95715:CDS | 40.0% |
| ! | ACAATTTGAAATGACGGGGT+TGG | - | chr4.1:55049627-55049646 | MS.gene95715:intron | 40.0% |
| ! | AGGATAGTGGTTTGCCATAA+CGG | + | chr4.1:55049306-55049325 | None:intergenic | 40.0% |
| ! | AGTCTTTGGTTGATGTTGGT+GGG | - | chr4.1:55049752-55049771 | MS.gene95715:CDS | 40.0% |
| ! | TTTGATGGTATCACCCATGT+TGG | - | chr4.1:55049871-55049890 | MS.gene95715:CDS | 40.0% |
| !! | TGACTTGTTCAACCAAGGTA+TGG | - | chr4.1:55049663-55049682 | MS.gene95715:intron | 40.0% |
| !!! | TTTTGCTCTAAAAGCTGTCG+TGG | - | chr4.1:55049255-55049274 | MS.gene95715:CDS | 40.0% |
| CAAACATGTCTCCTCCAACA+TGG | + | chr4.1:55049888-55049907 | None:intergenic | 45.0% | |
| CAATCCGTAGAGAATTTCGC+CGG | + | chr4.1:55049443-55049462 | None:intergenic | 45.0% | |
| GAAACCGGCGAAATTCTCTA+CGG | - | chr4.1:55049436-55049455 | MS.gene95715:CDS | 45.0% | |
| GATCATGTATTGGACCCAGA+AGG | - | chr4.1:55050174-55050193 | MS.gene95715:CDS | 45.0% | |
| GTCAAATGCTATCCCAGTGT+CGG | + | chr4.1:55050214-55050233 | None:intergenic | 45.0% | |
| TATCTTTGGGTGAATGGCAG+TGG | - | chr4.1:55050058-55050077 | MS.gene95715:CDS | 45.0% | |
| ! | ATGTTGCTTGCTCACAATGC+TGG | - | chr4.1:55050237-55050256 | MS.gene95715:CDS | 45.0% |
| ! | GGCAGTGGATTCTTCATGAT+TGG | - | chr4.1:55050073-55050092 | MS.gene95715:CDS | 45.0% |
| ! | GTCTTTGGTTGATGTTGGTG+GGG | - | chr4.1:55049753-55049772 | MS.gene95715:CDS | 45.0% |
| ! | TCAACCGCCCCTAATTTTGA+TGG | - | chr4.1:55049856-55049875 | MS.gene95715:CDS | 45.0% |
| ! | TCTTTGGTTGATGTTGGTGG+GGG | - | chr4.1:55049754-55049773 | MS.gene95715:CDS | 45.0% |
| AGCCCTCGACACAATTCTAG+CGG | + | chr4.1:55049695-55049714 | None:intergenic | 50.0% | |
| AGTAGAGTGGAATCAGGGGA+AGG | + | chr4.1:55049361-55049380 | None:intergenic | 50.0% | |
| CACCGCTAGAATTGTGTCGA+GGG | - | chr4.1:55049690-55049709 | MS.gene95715:CDS | 50.0% | |
| GATGGTATCACCCATGTTGG+AGG | - | chr4.1:55049874-55049893 | MS.gene95715:CDS | 50.0% | |
| GGGAATGCCTCAATGATGCA+TGG | + | chr4.1:55050351-55050370 | None:intergenic | 50.0% | |
| TAGCGGTGCAAACCATACCT+TGG | + | chr4.1:55049678-55049697 | None:intergenic | 50.0% | |
| TGCTCTGCCATGCATCATTG+AGG | - | chr4.1:55050341-55050360 | MS.gene95715:CDS | 50.0% | |
| TTGCTTGCTCACAATGCTGG+TGG | - | chr4.1:55050240-55050259 | MS.gene95715:CDS | 50.0% | |
| ! | GTTGATGTTGGTGGGGGTAT+CGG | - | chr4.1:55049760-55049779 | MS.gene95715:CDS | 50.0% |
| !! | GCTATCCCAGTGTCGGTAAA+TGG | + | chr4.1:55050207-55050226 | None:intergenic | 50.0% |
| GCACCGCTAGAATTGTGTCG+AGG | - | chr4.1:55049689-55049708 | MS.gene95715:CDS | 55.0% | |
| GTGTCGAGGGCTGTTATTGC+TGG | - | chr4.1:55049703-55049722 | MS.gene95715:CDS | 55.0% | |
| !! | GGGTATCGGAGGATCTCTCT+CGG | - | chr4.1:55049774-55049793 | MS.gene95715:CDS | 55.0% |
| GGGGCGGTTGAAACCACATG+AGG | + | chr4.1:55049847-55049866 | None:intergenic | 60.0% | |
| !! | GATGTTGGTGGGGGTATCGG+AGG | - | chr4.1:55049763-55049782 | MS.gene95715:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 55049235 | 55050377 | 55049235 | ID=MS.gene95715 |
| chr4.1 | mRNA | 55049235 | 55050377 | 55049235 | ID=MS.gene95715.t1;Parent=MS.gene95715 |
| chr4.1 | exon | 55049670 | 55050377 | 55049670 | ID=MS.gene95715.t1.exon1;Parent=MS.gene95715.t1 |
| chr4.1 | CDS | 55049670 | 55050377 | 55049670 | ID=cds.MS.gene95715.t1;Parent=MS.gene95715.t1 |
| chr4.1 | exon | 55049235 | 55049534 | 55049235 | ID=MS.gene95715.t1.exon2;Parent=MS.gene95715.t1 |
| chr4.1 | CDS | 55049235 | 55049534 | 55049235 | ID=cds.MS.gene95715.t1;Parent=MS.gene95715.t1 |
| Gene Sequence |
| Protein sequence |
