Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55678.t1 | XP_013460527.1 | 92.4 | 327 | 25 | 0 | 1 | 327 | 1 | 327 | 1.40E-164 | 589 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55678.t1 | Q93V85 | 77.9 | 289 | 64 | 0 | 34 | 322 | 124 | 412 | 5.4e-125 | 448.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55678.t1 | A0A072UYN8 | 92.4 | 327 | 25 | 0 | 1 | 327 | 1 | 327 | 1.0e-164 | 589.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene55678 | 0.84435 | 7.99E-59 | -1.69E-46 |
| MS.gene049171 | MS.gene55678 | 0.883671 | 3.68E-71 | -1.69E-46 |
| MS.gene049217 | MS.gene55678 | 0.822566 | 2.21E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene55678 | 0.846808 | 1.72E-59 | -1.69E-46 |
| MS.gene049257 | MS.gene55678 | 0.844626 | 6.73E-59 | -1.69E-46 |
| MS.gene049285 | MS.gene55678 | 0.836099 | 1.14E-56 | -1.69E-46 |
| MS.gene049320 | MS.gene55678 | 0.81197 | 5.36E-51 | -1.69E-46 |
| MS.gene049373 | MS.gene55678 | 0.801177 | 1.02E-48 | -1.69E-46 |
| MS.gene04939 | MS.gene55678 | 0.819131 | 1.36E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene55678 | 0.869301 | 3.43E-66 | -1.69E-46 |
| MS.gene049633 | MS.gene55678 | 0.875367 | 3.26E-68 | -1.69E-46 |
| MS.gene049805 | MS.gene55678 | 0.836697 | 8.04E-57 | -1.69E-46 |
| MS.gene049865 | MS.gene55678 | 0.814889 | 1.22E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene55678 | 0.810134 | 1.34E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene55678 | 0.841441 | 4.74E-58 | -1.69E-46 |
| MS.gene050323 | MS.gene55678 | 0.827744 | 1.32E-54 | -1.69E-46 |
| MS.gene050444 | MS.gene55678 | 0.808365 | 3.21E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene55678 | 0.829069 | 6.33E-55 | -1.69E-46 |
| MS.gene050518 | MS.gene55678 | 0.802974 | 4.35E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene55678 | 0.851001 | 1.18E-60 | -1.69E-46 |
| MS.gene050547 | MS.gene55678 | -0.800807 | 1.21E-48 | -1.69E-46 |
| MS.gene050577 | MS.gene55678 | 0.834498 | 2.90E-56 | -1.69E-46 |
| MS.gene050593 | MS.gene55678 | 0.847337 | 1.23E-59 | -1.69E-46 |
| MS.gene050612 | MS.gene55678 | 0.840325 | 9.31E-58 | -1.69E-46 |
| MS.gene050647 | MS.gene55678 | -0.805134 | 1.55E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene55678 | 0.808505 | 3.00E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene55678 | 0.817715 | 2.86E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene55678 | 0.842246 | 2.91E-58 | -1.69E-46 |
| MS.gene050747 | MS.gene55678 | 0.85636 | 3.39E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene55678 | 0.844616 | 6.77E-59 | -1.69E-46 |
| MS.gene05080 | MS.gene55678 | 0.875677 | 2.55E-68 | -1.69E-46 |
| MS.gene05081 | MS.gene55678 | 0.954325 | 3.81E-112 | -1.69E-46 |
| MS.gene050868 | MS.gene55678 | 0.841843 | 3.72E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene55678 | 0.841648 | 4.18E-58 | -1.69E-46 |
| MS.gene050904 | MS.gene55678 | 0.811735 | 6.03E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene55678 | 0.853218 | 2.76E-61 | -1.69E-46 |
| MS.gene050986 | MS.gene55678 | 0.822813 | 1.94E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene55678 | 0.817148 | 3.83E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene55678 | 0.841953 | 3.47E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene55678 | 0.821775 | 3.38E-53 | -1.69E-46 |
| MS.gene051525 | MS.gene55678 | 0.813333 | 2.70E-51 | -1.69E-46 |
| MS.gene051552 | MS.gene55678 | -0.8219 | 3.16E-53 | -1.69E-46 |
| MS.gene051617 | MS.gene55678 | 0.806225 | 9.12E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene55678 | 0.820156 | 7.96E-53 | -1.69E-46 |
| MS.gene051734 | MS.gene55678 | 0.846253 | 2.44E-59 | -1.69E-46 |
| MS.gene051810 | MS.gene55678 | 0.80641 | 8.34E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene55678 | 0.919342 | 5.07E-87 | -1.69E-46 |
| MS.gene051858 | MS.gene55678 | 0.810602 | 1.06E-50 | -1.69E-46 |
| MS.gene051941 | MS.gene55678 | 0.82042 | 6.93E-53 | -1.69E-46 |
| MS.gene052134 | MS.gene55678 | 0.805998 | 1.02E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene55678 | 0.830825 | 2.36E-55 | -1.69E-46 |
| MS.gene052346 | MS.gene55678 | 0.803894 | 2.80E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene55678 | 0.823643 | 1.24E-53 | -1.69E-46 |
| MS.gene052469 | MS.gene55678 | 0.807296 | 5.42E-50 | -1.69E-46 |
| MS.gene052481 | MS.gene55678 | 0.841524 | 4.51E-58 | -1.69E-46 |
| MS.gene052482 | MS.gene55678 | 0.814571 | 1.44E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene55678 | 0.840361 | 9.11E-58 | -1.69E-46 |
| MS.gene052486 | MS.gene55678 | 0.823895 | 1.08E-53 | -1.69E-46 |
| MS.gene052501 | MS.gene55678 | 0.854837 | 9.43E-62 | -1.69E-46 |
| MS.gene052503 | MS.gene55678 | 0.864225 | 1.42E-64 | -1.69E-46 |
| MS.gene052505 | MS.gene55678 | 0.851075 | 1.12E-60 | -1.69E-46 |
| MS.gene052506 | MS.gene55678 | 0.818401 | 2.00E-52 | -1.69E-46 |
| MS.gene052615 | MS.gene55678 | 0.869057 | 4.12E-66 | -1.69E-46 |
| MS.gene052822 | MS.gene55678 | 0.812897 | 3.36E-51 | -1.69E-46 |
| MS.gene052823 | MS.gene55678 | 0.854738 | 1.01E-61 | -1.69E-46 |
| MS.gene052825 | MS.gene55678 | 0.858395 | 8.48E-63 | -1.69E-46 |
| MS.gene052870 | MS.gene55678 | 0.840823 | 6.89E-58 | -1.69E-46 |
| MS.gene052872 | MS.gene55678 | 0.850828 | 1.32E-60 | -1.69E-46 |
| MS.gene052966 | MS.gene55678 | 0.861506 | 9.78E-64 | -1.69E-46 |
| MS.gene052982 | MS.gene55678 | 0.83703 | 6.61E-57 | -1.69E-46 |
| MS.gene053107 | MS.gene55678 | 0.80519 | 1.50E-49 | -1.69E-46 |
| MS.gene053117 | MS.gene55678 | 0.808985 | 2.37E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene55678 | 0.852259 | 5.19E-61 | -1.69E-46 |
| MS.gene053207 | MS.gene55678 | 0.868652 | 5.57E-66 | -1.69E-46 |
| MS.gene053213 | MS.gene55678 | 0.822366 | 2.46E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene55678 | 0.815145 | 1.07E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene55678 | 0.807948 | 3.94E-50 | -1.69E-46 |
| MS.gene053479 | MS.gene55678 | 0.852632 | 4.07E-61 | -1.69E-46 |
| MS.gene053480 | MS.gene55678 | 0.868557 | 5.98E-66 | -1.69E-46 |
| MS.gene053574 | MS.gene55678 | 0.820921 | 5.31E-53 | -1.69E-46 |
| MS.gene053579 | MS.gene55678 | 0.807262 | 5.51E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene55678 | 0.836697 | 8.04E-57 | -1.69E-46 |
| MS.gene053824 | MS.gene55678 | 0.87716 | 7.85E-69 | -1.69E-46 |
| MS.gene053915 | MS.gene55678 | 0.802178 | 6.35E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene55678 | 0.800657 | 1.30E-48 | -1.69E-46 |
| MS.gene053997 | MS.gene55678 | 0.829847 | 4.09E-55 | -1.69E-46 |
| MS.gene054107 | MS.gene55678 | 0.823526 | 1.32E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene55678 | 0.82341 | 1.41E-53 | -1.69E-46 |
| MS.gene054344 | MS.gene55678 | 0.857608 | 1.45E-62 | -1.69E-46 |
| MS.gene054408 | MS.gene55678 | 0.829618 | 4.65E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene55678 | 0.845378 | 4.22E-59 | -1.69E-46 |
| MS.gene054600 | MS.gene55678 | 0.857356 | 1.73E-62 | -1.69E-46 |
| MS.gene054642 | MS.gene55678 | 0.811953 | 5.41E-51 | -1.69E-46 |
| MS.gene054706 | MS.gene55678 | -0.817733 | 2.83E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene55678 | 0.843228 | 1.59E-58 | -1.69E-46 |
| MS.gene054884 | MS.gene55678 | -0.847265 | 1.29E-59 | -1.69E-46 |
| MS.gene054927 | MS.gene55678 | 0.84533 | 4.34E-59 | -1.69E-46 |
| MS.gene05494 | MS.gene55678 | 0.828474 | 8.81E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene55678 | 0.81454 | 1.46E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene55678 | 0.87825 | 3.27E-69 | -1.69E-46 |
| MS.gene055224 | MS.gene55678 | 0.830162 | 3.43E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene55678 | 0.850374 | 1.77E-60 | -1.69E-46 |
| MS.gene055362 | MS.gene55678 | 0.828159 | 1.05E-54 | -1.69E-46 |
| MS.gene055370 | MS.gene55678 | 0.81933 | 1.23E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene55678 | 0.866758 | 2.26E-65 | -1.69E-46 |
| MS.gene055539 | MS.gene55678 | 0.82876 | 7.52E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene55678 | 0.872964 | 2.12E-67 | -1.69E-46 |
| MS.gene055722 | MS.gene55678 | 0.80556 | 1.26E-49 | -1.69E-46 |
| MS.gene055741 | MS.gene55678 | 0.835275 | 1.84E-56 | -1.69E-46 |
| MS.gene055744 | MS.gene55678 | 0.831519 | 1.59E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene55678 | 0.837156 | 6.14E-57 | -1.69E-46 |
| MS.gene055750 | MS.gene55678 | 0.804938 | 1.70E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene55678 | 0.81983 | 9.45E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene55678 | 0.870743 | 1.16E-66 | -1.69E-46 |
| MS.gene055941 | MS.gene55678 | 0.850922 | 1.24E-60 | -1.69E-46 |
| MS.gene056040 | MS.gene55678 | 0.819627 | 1.05E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene55678 | 0.852018 | 6.08E-61 | -1.69E-46 |
| MS.gene056351 | MS.gene55678 | 0.801487 | 8.80E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene55678 | 0.800525 | 1.38E-48 | -1.69E-46 |
| MS.gene056504 | MS.gene55678 | 0.841567 | 4.40E-58 | -1.69E-46 |
| MS.gene056510 | MS.gene55678 | 0.824355 | 8.44E-54 | -1.69E-46 |
| MS.gene056610 | MS.gene55678 | 0.81822 | 2.20E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene55678 | 0.805327 | 1.41E-49 | -1.69E-46 |
| MS.gene056692 | MS.gene55678 | 0.82383 | 1.12E-53 | -1.69E-46 |
| MS.gene056796 | MS.gene55678 | 0.812827 | 3.49E-51 | -1.69E-46 |
| MS.gene056877 | MS.gene55678 | 0.868951 | 4.46E-66 | -1.69E-46 |
| MS.gene057019 | MS.gene55678 | 0.804253 | 2.36E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene55678 | 0.817361 | 3.43E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene55678 | 0.84666 | 1.89E-59 | -1.69E-46 |
| MS.gene057086 | MS.gene55678 | 0.80055 | 1.37E-48 | -1.69E-46 |
| MS.gene057124 | MS.gene55678 | 0.837971 | 3.79E-57 | -1.69E-46 |
| MS.gene057196 | MS.gene55678 | 0.861455 | 1.01E-63 | -1.69E-46 |
| MS.gene057289 | MS.gene55678 | 0.809744 | 1.63E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene55678 | 0.81372 | 2.22E-51 | -1.69E-46 |
| MS.gene057332 | MS.gene55678 | 0.883989 | 2.81E-71 | -1.69E-46 |
| MS.gene057416 | MS.gene55678 | 0.830373 | 3.05E-55 | -1.69E-46 |
| MS.gene057658 | MS.gene55678 | 0.871746 | 5.40E-67 | -1.69E-46 |
| MS.gene057823 | MS.gene55678 | 0.800156 | 1.65E-48 | -1.69E-46 |
| MS.gene057831 | MS.gene55678 | 0.848029 | 7.95E-60 | -1.69E-46 |
| MS.gene057856 | MS.gene55678 | 0.827643 | 1.40E-54 | -1.69E-46 |
| MS.gene057857 | MS.gene55678 | 0.803522 | 3.35E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene55678 | 0.808644 | 2.80E-50 | -1.69E-46 |
| MS.gene058130 | MS.gene55678 | 0.824184 | 9.26E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene55678 | 0.881587 | 2.12E-70 | -1.69E-46 |
| MS.gene058376 | MS.gene55678 | 0.810535 | 1.10E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene55678 | 0.879813 | 9.17E-70 | -1.69E-46 |
| MS.gene058418 | MS.gene55678 | -0.834831 | 2.39E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene55678 | 0.8493 | 3.53E-60 | -1.69E-46 |
| MS.gene058444 | MS.gene55678 | 0.844556 | 7.03E-59 | -1.69E-46 |
| MS.gene058544 | MS.gene55678 | 0.860349 | 2.20E-63 | -1.69E-46 |
| MS.gene058700 | MS.gene55678 | 0.814508 | 1.49E-51 | -1.69E-46 |
| MS.gene058746 | MS.gene55678 | 0.803695 | 3.08E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene55678 | 0.827662 | 1.38E-54 | -1.69E-46 |
| MS.gene058838 | MS.gene55678 | 0.88991 | 1.59E-73 | -1.69E-46 |
| MS.gene059022 | MS.gene55678 | 0.825589 | 4.32E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene55678 | 0.913321 | 7.05E-84 | -1.69E-46 |
| MS.gene05914 | MS.gene55678 | 0.873929 | 1.00E-67 | -1.69E-46 |
| MS.gene059303 | MS.gene55678 | 0.825418 | 4.74E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene55678 | 0.828272 | 9.86E-55 | -1.69E-46 |
| MS.gene059455 | MS.gene55678 | 0.808291 | 3.33E-50 | -1.69E-46 |
| MS.gene059512 | MS.gene55678 | 0.828213 | 1.02E-54 | -1.69E-46 |
| MS.gene05960 | MS.gene55678 | -0.802117 | 6.53E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene55678 | 0.846131 | 2.63E-59 | -1.69E-46 |
| MS.gene059677 | MS.gene55678 | 0.837076 | 6.43E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene55678 | 0.845578 | 3.72E-59 | -1.69E-46 |
| MS.gene059756 | MS.gene55678 | 0.837683 | 4.50E-57 | -1.69E-46 |
| MS.gene059801 | MS.gene55678 | 0.81035 | 1.20E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene55678 | 0.809023 | 2.32E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene55678 | 0.804688 | 1.92E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene55678 | 0.834123 | 3.59E-56 | -1.69E-46 |
| MS.gene06027 | MS.gene55678 | 0.82991 | 3.95E-55 | -1.69E-46 |
| MS.gene060485 | MS.gene55678 | 0.814358 | 1.60E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene55678 | 0.845649 | 3.56E-59 | -1.69E-46 |
| MS.gene06077 | MS.gene55678 | 0.846211 | 2.51E-59 | -1.69E-46 |
| MS.gene060835 | MS.gene55678 | 0.855067 | 8.09E-62 | -1.69E-46 |
| MS.gene060837 | MS.gene55678 | 0.8013 | 9.61E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene55678 | 0.892049 | 2.27E-74 | -1.69E-46 |
| MS.gene060982 | MS.gene55678 | 0.846412 | 2.21E-59 | -1.69E-46 |
| MS.gene061150 | MS.gene55678 | 0.847719 | 9.68E-60 | -1.69E-46 |
| MS.gene061231 | MS.gene55678 | 0.84827 | 6.82E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55678.t1 | MTR_3g063240 | 92.355 | 327 | 25 | 0 | 1 | 327 | 1 | 327 | 0.0 | 606 |
| MS.gene55678.t1 | MTR_3g063250 | 89.441 | 322 | 33 | 1 | 7 | 327 | 79 | 400 | 0.0 | 528 |
| MS.gene55678.t1 | MTR_3g063250 | 88.927 | 289 | 31 | 1 | 7 | 294 | 79 | 367 | 1.88e-165 | 465 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55678.t1 | AT3G02690 | 72.555 | 317 | 83 | 2 | 7 | 322 | 99 | 412 | 6.31e-154 | 438 |
Find 90 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTCGATGCTGCTTGCTTTC+AGG | 0.034711 | 3.3:-57149058 | MS.gene55678:CDS |
| TAATATCGCCGTTCTTCTTC+TGG | 0.156426 | 3.3:-57149251 | MS.gene55678:CDS |
| TTACTTGCGGCTTTGCTATT+TGG | 0.173010 | 3.3:-57148329 | MS.gene55678:CDS |
| CAACGATAGTTGAAGGGTTA+TGG | 0.279629 | 3.3:-57149287 | MS.gene55678:CDS |
| GTCGATGCTGCTTGCTTTCA+GGG | 0.294962 | 3.3:-57149057 | MS.gene55678:CDS |
| TCTCACCTGTACAGCTTGTT+GGG | 0.295751 | 3.3:-57146651 | MS.gene55678:CDS |
| GGAGAAAACTTCAGCTGGTT+TGG | 0.296313 | 3.3:-57149016 | MS.gene55678:CDS |
| AGCATCGACGAGAGCAAATA+TGG | 0.297028 | 3.3:+57149071 | None:intergenic |
| TTCCTTCTGGCTTCCATGCT+TGG | 0.297169 | 3.3:-57149104 | MS.gene55678:CDS |
| TATTTCAGGTTTCTGTATCT+TGG | 0.302197 | 3.3:-57146682 | MS.gene55678:intron |
| AGAGGAAGGGCGTTTCCTTC+TGG | 0.304509 | 3.3:-57149117 | MS.gene55678:CDS |
| TTGCTATTTGGCGAGTCTAT+TGG | 0.312845 | 3.3:-57148317 | MS.gene55678:CDS |
| AGTTGGTCCCATCATTTGAT+AGG | 0.337361 | 3.3:+57147961 | None:intergenic |
| GGCGAGTCTATTGGAATTGT+TGG | 0.344856 | 3.3:-57148308 | MS.gene55678:CDS |
| CATCTTCTTCTGCACTTAAG+AGG | 0.346078 | 3.3:+57149340 | None:intergenic |
| AATATCGCCGTTCTTCTTCT+GGG | 0.346517 | 3.3:-57149250 | MS.gene55678:CDS |
| TTCTCACCTGTACAGCTTGT+TGG | 0.369065 | 3.3:-57146652 | MS.gene55678:CDS |
| GAGAAAACTTCAGCTGGTTT+GGG | 0.378742 | 3.3:-57149015 | MS.gene55678:CDS |
| GGGCTTGTACTTGGTGTTGT+AGG | 0.380113 | 3.3:-57148278 | MS.gene55678:CDS |
| CTTCTTCTGGGGCACTTCCA+TGG | 0.396917 | 3.3:-57149238 | MS.gene55678:CDS |
| AACGATAGTTGAAGGGTTAT+GGG | 0.412873 | 3.3:-57149286 | MS.gene55678:CDS |
| ATTGGAATTGTTGGAGCTGC+CGG | 0.417641 | 3.3:-57148299 | MS.gene55678:CDS |
| GGAGCTGCCGGGCTTGTACT+TGG | 0.418936 | 3.3:-57148287 | MS.gene55678:CDS |
| TGTGGGGAAGTGGGGAGTTG+TGG | 0.428196 | 3.3:-57147932 | MS.gene55678:CDS |
| AACAACGACCCTGCTGTAAG+TGG | 0.430978 | 3.3:-57147555 | MS.gene55678:CDS |
| ACCCATCCAGTTGCCATGAT+AGG | 0.438828 | 3.3:+57147840 | None:intergenic |
| AACTTCTCACTGTGGGGAAG+TGG | 0.449426 | 3.3:-57147942 | MS.gene55678:CDS |
| GTACAGTTCAACTGATGTAT+TGG | 0.457095 | 3.3:-57147520 | MS.gene55678:CDS |
| TTACAGCATATGGTTATTGG+TGG | 0.460064 | 3.3:-57147606 | MS.gene55678:intron |
| TCTGATCCTATCATGGCAAC+TGG | 0.460438 | 3.3:-57147846 | MS.gene55678:CDS |
| CATGATAGGATCAGAGTACT+TGG | 0.465171 | 3.3:+57147854 | None:intergenic |
| TCGTTTCGTCTCATTCCTGC+CGG | 0.471862 | 3.3:-57149168 | MS.gene55678:CDS |
| TTGGAATTGTTGGAGCTGCC+GGG | 0.483479 | 3.3:-57148298 | MS.gene55678:CDS |
| TTTGGAAGCGCTGTTAGCTA+TGG | 0.497044 | 3.3:-57147477 | MS.gene55678:CDS |
| TCATTGCCAACGATAGTTGA+AGG | 0.500413 | 3.3:-57149294 | MS.gene55678:CDS |
| CGTTTCGTCTCATTCCTGCC+GGG | 0.504091 | 3.3:-57149167 | MS.gene55678:CDS |
| CAAGTACTCTGATCCTATCA+TGG | 0.508310 | 3.3:-57147853 | MS.gene55678:CDS |
| TTAAGACTCCCACTTACAGC+AGG | 0.509878 | 3.3:+57147546 | None:intergenic |
| GGGTTGGAGAAAACTTCAGC+TGG | 0.512915 | 3.3:-57149021 | MS.gene55678:CDS |
| AAAGAAGTGATTCCGAAATA+CGG | 0.514005 | 3.3:-57149207 | MS.gene55678:CDS |
| CCGGCCCCAACAAGCTGTAC+AGG | 0.515978 | 3.3:+57146646 | None:intergenic |
| CCTGTACAGCTTGTTGGGGC+CGG | 0.516962 | 3.3:-57146646 | MS.gene55678:CDS |
| ATCCTATCATGGCAACTGGA+TGG | 0.520007 | 3.3:-57147842 | MS.gene55678:CDS |
| AAATGTAAGTGAACTGAGCT+TGG | 0.524209 | 3.3:+57147087 | None:intergenic |
| ACTTCTCACTGTGGGGAAGT+GGG | 0.524428 | 3.3:-57147941 | MS.gene55678:CDS |
| TTACCTTCCCTATCAAATGA+TGG | 0.526160 | 3.3:-57147969 | MS.gene55678:CDS |
| TCCTATCATGGCAACTGGAT+GGG | 0.527496 | 3.3:-57147841 | MS.gene55678:intron |
| TTGGCACTGTCATGGTTCGG+TGG | 0.529695 | 3.3:-57147881 | MS.gene55678:CDS |
| TGGCACTGTCATGGTTCGGT+GGG | 0.533959 | 3.3:-57147880 | MS.gene55678:CDS |
| GTTGGTCCCATCATTTGATA+GGG | 0.534214 | 3.3:+57147962 | None:intergenic |
| ACTTCCCCACAGTGAGAAGT+TGG | 0.536693 | 3.3:+57147944 | None:intergenic |
| AAAAGCAACAAGAAGGAACC+CGG | 0.541215 | 3.3:+57149149 | None:intergenic |
| TATTGCAGCTACAGTAATAC+CGG | 0.543443 | 3.3:+57146627 | None:intergenic |
| TTTGACAGTGGCTTTACTTG+CGG | 0.544816 | 3.3:-57148342 | MS.gene55678:CDS |
| CTTCTCACTGTGGGGAAGTG+GGG | 0.546730 | 3.3:-57147940 | MS.gene55678:CDS |
| ATATCGCCGTTCTTCTTCTG+GGG | 0.550209 | 3.3:-57149249 | MS.gene55678:CDS |
| GCTTCTTGCAGCTCAGAGCA+TGG | 0.554655 | 3.3:-57147907 | MS.gene55678:CDS |
| GCAAGTAAAGCCACTGTCAA+AGG | 0.555535 | 3.3:+57148344 | None:intergenic |
| GTCCCATCATTTGATAGGGA+AGG | 0.560690 | 3.3:+57147966 | None:intergenic |
| TACAACACCAAGTACAAGCC+CGG | 0.560997 | 3.3:+57148280 | None:intergenic |
| CTCTTAAGTGCAGAAGAAGA+TGG | 0.563214 | 3.3:-57149339 | MS.gene55678:CDS |
| TACTGTAGCTGCAATATACA+TGG | 0.565537 | 3.3:-57146620 | MS.gene55678:CDS |
| TGGGACCAACTTCTCACTGT+GGG | 0.567404 | 3.3:-57147949 | MS.gene55678:CDS |
| CAGTTGGCACTGTCATGGTT+CGG | 0.567605 | 3.3:-57147884 | MS.gene55678:CDS |
| TACCTTCCCTATCAAATGAT+GGG | 0.568733 | 3.3:-57147968 | MS.gene55678:CDS |
| CATAACCCTTCAACTATCGT+TGG | 0.574957 | 3.3:+57149288 | None:intergenic |
| CATGGCAGTTGGCACTGTCA+TGG | 0.583057 | 3.3:-57147889 | MS.gene55678:CDS |
| GCAACAAGAAGGAACCCGGC+AGG | 0.583290 | 3.3:+57149153 | None:intergenic |
| CATTGCCAACGATAGTTGAA+GGG | 0.584619 | 3.3:-57149293 | MS.gene55678:CDS |
| GACGAGAGCAAATATGGCGA+TGG | 0.586449 | 3.3:+57149077 | None:intergenic |
| GCAGCTCAGAGCATGGCAGT+TGG | 0.587376 | 3.3:-57147900 | MS.gene55678:CDS |
| AACCAGCAAAAGCAACAAGA+AGG | 0.591823 | 3.3:+57149142 | None:intergenic |
| TGATTCACAACCTTTGACAG+TGG | 0.592362 | 3.3:-57148354 | MS.gene55678:CDS |
| AACAAGCTGTACAGGTGAGA+AGG | 0.593339 | 3.3:+57146654 | None:intergenic |
| CTCACCTGTACAGCTTGTTG+GGG | 0.603980 | 3.3:-57146650 | MS.gene55678:CDS |
| CACTTCTTTCATCGCCACCA+TGG | 0.610773 | 3.3:+57149221 | None:intergenic |
| AGCCAAGCATGGAAGCCAGA+AGG | 0.612271 | 3.3:+57149102 | None:intergenic |
| TGGCGATGGAGAGCCAAGCA+TGG | 0.615881 | 3.3:+57149091 | None:intergenic |
| TAAGAATCGCTAATGCCACA+AGG | 0.616917 | 3.3:+57147577 | None:intergenic |
| GAAGTGCCCCAGAAGAAGAA+CGG | 0.628202 | 3.3:+57149243 | None:intergenic |
| CTTCTGGGGCACTTCCATGG+TGG | 0.634864 | 3.3:-57149235 | MS.gene55678:CDS |
| AAGAATCGCTAATGCCACAA+GGG | 0.636088 | 3.3:+57147578 | None:intergenic |
| ATAGTTGAAGGGTTATGGGA+AGG | 0.643808 | 3.3:-57149282 | MS.gene55678:CDS |
| TGTAGGACTTGTGTTACTCG+AGG | 0.646341 | 3.3:-57148261 | MS.gene55678:intron |
| ACAACGACCCTGCTGTAAGT+GGG | 0.654735 | 3.3:-57147554 | MS.gene55678:CDS |
| AGAATCGCTAATGCCACAAG+GGG | 0.656521 | 3.3:+57147579 | None:intergenic |
| TAAGACTCCCACTTACAGCA+GGG | 0.658809 | 3.3:+57147547 | None:intergenic |
| ATGGGACCAACTTCTCACTG+TGG | 0.681145 | 3.3:-57147950 | MS.gene55678:CDS |
| GGGACCAACTTCTCACTGTG+GGG | 0.711575 | 3.3:-57147948 | MS.gene55678:CDS |
| GAATCGCTAATGCCACAAGG+GGG | 0.752839 | 3.3:+57147580 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATTATAATTGTAAAAGA+TGG | + | chr3.3:57149077-57149096 | None:intergenic | 15.0% |
| !! | ACTATTCTATTATTATTGTT+TGG | - | chr3.3:57147033-57147052 | MS.gene55678:intron | 15.0% |
| !! | CTATTCTATTATTATTGTTT+GGG | - | chr3.3:57147034-57147053 | MS.gene55678:intron | 15.0% |
| !! | TAATATGACATATTCTTTAT+GGG | + | chr3.3:57148810-57148829 | None:intergenic | 15.0% |
| !!! | AAAAGTATTATGCATATAAT+TGG | - | chr3.3:57147795-57147814 | MS.gene55678:intron | 15.0% |
| !!! | ACTTTTCTTTTTCTTTTAAA+CGG | - | chr3.3:57147295-57147314 | MS.gene55678:intron | 15.0% |
| !! | AAAAGTTGTTGAGTTAAATT+TGG | - | chr3.3:57147515-57147534 | MS.gene55678:CDS | 20.0% |
| !! | AAATCTTCAAGTATACAAAA+TGG | + | chr3.3:57148753-57148772 | None:intergenic | 20.0% |
| !! | ATATAATTGGAACGATATTA+AGG | - | chr3.3:57147808-57147827 | MS.gene55678:intron | 20.0% |
| !! | CTAATATGACATATTCTTTA+TGG | + | chr3.3:57148811-57148830 | None:intergenic | 20.0% |
| !! | GTAGTAATAATGACTATATT+CGG | - | chr3.3:57147219-57147238 | MS.gene55678:intron | 20.0% |
| !! | TCAAAATTACAAAATCAACT+CGG | + | chr3.3:57147888-57147907 | None:intergenic | 20.0% |
| !! | TCTAATCGTTTAAAAAAAAG+AGG | - | chr3.3:57148250-57148269 | MS.gene55678:intron | 20.0% |
| !!! | ATTTTATAGAGTAATTTCAC+GGG | + | chr3.3:57147457-57147476 | None:intergenic | 20.0% |
| !!! | CATTTTATAGAGTAATTTCA+CGG | + | chr3.3:57147458-57147477 | None:intergenic | 20.0% |
| !!! | CTTTTCTTTTTCTTTTAAAC+GGG | - | chr3.3:57147296-57147315 | MS.gene55678:intron | 20.0% |
| !!! | GAAGTTTCTTTTTGTTTTTT+AGG | - | chr3.3:57148961-57148980 | MS.gene55678:intron | 20.0% |
| ! | ACGATATTAAGGATATGTTT+AGG | - | chr3.3:57147819-57147838 | MS.gene55678:intron | 25.0% |
| ! | ACTGAATAGTACATAATAGA+AGG | + | chr3.3:57147941-57147960 | None:intergenic | 25.0% |
| ! | ATATCCTCAAATAAGACTAT+AGG | - | chr3.3:57147078-57147097 | MS.gene55678:CDS | 25.0% |
| ! | CGTTTAAAAAAAAGAGGAAA+GGG | - | chr3.3:57148256-57148275 | MS.gene55678:intron | 25.0% |
| ! | CTTATTTGAGGATATATACA+AGG | + | chr3.3:57147073-57147092 | None:intergenic | 25.0% |
| ! | TAGTGGAATGATGATTATAT+AGG | - | chr3.3:57148191-57148210 | MS.gene55678:intron | 25.0% |
| ! | TCGTTTAAAAAAAAGAGGAA+AGG | - | chr3.3:57148255-57148274 | MS.gene55678:intron | 25.0% |
| !! | CAATAATACTGATTACAATG+TGG | + | chr3.3:57148718-57148737 | None:intergenic | 25.0% |
| !! | CATGTTTATGTTTCTTTTTG+AGG | - | chr3.3:57149225-57149244 | MS.gene55678:CDS | 25.0% |
| !! | TAGTACATAATAGAAGGTAT+TGG | + | chr3.3:57147935-57147954 | None:intergenic | 25.0% |
| !!! | ATATTCTTTATGGGTTGATA+TGG | + | chr3.3:57148801-57148820 | None:intergenic | 25.0% |
| !!! | ATGTTAATTTGCTAGAAGAA+AGG | + | chr3.3:57149189-57149208 | None:intergenic | 25.0% |
| !!! | ATTGATATTGCTGTTTTGTT+TGG | - | chr3.3:57147344-57147363 | MS.gene55678:intron | 25.0% |
| !!! | TTGATATTGCTGTTTTGTTT+GGG | - | chr3.3:57147345-57147364 | MS.gene55678:intron | 25.0% |
| !!! | TTGTTTTTGTGATGTATTAC+AGG | - | chr3.3:57148839-57148858 | MS.gene55678:intron | 25.0% |
| AAAGAAGTGATTCCGAAATA+CGG | - | chr3.3:57146750-57146769 | MS.gene55678:intron | 30.0% | |
| AAGAAAGGCTAGTGATAAAA+AGG | + | chr3.3:57149174-57149193 | None:intergenic | 30.0% | |
| ACAAAAAAAGGACCGTATTT+CGG | + | chr3.3:57146765-57146784 | None:intergenic | 30.0% | |
| AGCCAAAAATGTGTATACAA+AGG | + | chr3.3:57149252-57149271 | None:intergenic | 30.0% | |
| CATACAATGTGCATTAGATA+AGG | + | chr3.3:57147415-57147434 | None:intergenic | 30.0% | |
| CCATATGCTGTAAAAGAAAT+AGG | + | chr3.3:57148344-57148363 | None:intergenic | 30.0% | |
| CGAAACGAAGAAACAAAAAA+AGG | + | chr3.3:57146777-57146796 | None:intergenic | 30.0% | |
| CTTATCTAATGCACATTGTA+TGG | - | chr3.3:57147413-57147432 | MS.gene55678:intron | 30.0% | |
| CTTTAAATGCAAAGTCATTC+AGG | - | chr3.3:57149040-57149059 | MS.gene55678:CDS | 30.0% | |
| TAAGAACTTTGTAGAAGCTT+TGG | - | chr3.3:57148302-57148321 | MS.gene55678:CDS | 30.0% | |
| TGTTTGTAAACTGAAAGTAG+TGG | - | chr3.3:57148174-57148193 | MS.gene55678:intron | 30.0% | |
| TTGAGATGTACAATTTCTCT+TGG | - | chr3.3:57147904-57147923 | MS.gene55678:CDS | 30.0% | |
| ! | ACGAAAAGTTATGATTTTGC+AGG | + | chr3.3:57149150-57149169 | None:intergenic | 30.0% |
| ! | CTTTTACAGCATATGGTTAT+TGG | - | chr3.3:57148348-57148367 | MS.gene55678:CDS | 30.0% |
| ! | GACCTTTGTATACACATTTT+TGG | - | chr3.3:57149247-57149266 | MS.gene55678:CDS | 30.0% |
| ! | TTCTTTTACAGTGCAACTAA+AGG | - | chr3.3:57148507-57148526 | MS.gene55678:intron | 30.0% |
| !! | ATACTTTTGACTGCTAACTT+TGG | + | chr3.3:57147783-57147802 | None:intergenic | 30.0% |
| !! | CCTATTTCTTTTACAGCATA+TGG | - | chr3.3:57148341-57148360 | MS.gene55678:CDS | 30.0% |
| !! | TACTTTTGACTGCTAACTTT+GGG | + | chr3.3:57147782-57147801 | None:intergenic | 30.0% |
| !! | TATTTCAGGTTTCTGTATCT+TGG | - | chr3.3:57149275-57149294 | MS.gene55678:CDS | 30.0% |
| !! | TTCACCTATAGTCTTATTTG+AGG | + | chr3.3:57147085-57147104 | None:intergenic | 30.0% |
| !!! | TTGTATACACATTTTTGGCT+TGG | - | chr3.3:57149252-57149271 | MS.gene55678:CDS | 30.0% |
| AAAATCAGAAAGACAGCTGA+TGG | - | chr3.3:57149004-57149023 | MS.gene55678:intron | 35.0% | |
| AAATGTAAGTGAACTGAGCT+TGG | + | chr3.3:57148873-57148892 | None:intergenic | 35.0% | |
| AACGATAGTTGAAGGGTTAT+GGG | - | chr3.3:57146671-57146690 | MS.gene55678:CDS | 35.0% | |
| GACTATCTAGTGTGGATATA+TGG | - | chr3.3:57147569-57147588 | MS.gene55678:CDS | 35.0% | |
| GTACAGTTCAACTGATGTAT+TGG | - | chr3.3:57148437-57148456 | MS.gene55678:intron | 35.0% | |
| GTGTGTCATATTGATAGAAC+TGG | - | chr3.3:57147484-57147503 | MS.gene55678:CDS | 35.0% | |
| TACCTTCCCTATCAAATGAT+GGG | - | chr3.3:57147989-57148008 | MS.gene55678:intron | 35.0% | |
| TACTGTAGCTGCAATATACA+TGG | - | chr3.3:57149337-57149356 | MS.gene55678:CDS | 35.0% | |
| TATTGCAGCTACAGTAATAC+CGG | + | chr3.3:57149333-57149352 | None:intergenic | 35.0% | |
| TTACAGCATATGGTTATTGG+TGG | - | chr3.3:57148351-57148370 | MS.gene55678:CDS | 35.0% | |
| TTACCTTCCCTATCAAATGA+TGG | - | chr3.3:57147988-57148007 | MS.gene55678:intron | 35.0% | |
| TTCCAAAAATGGACATGTAG+AGG | + | chr3.3:57148467-57148486 | None:intergenic | 35.0% | |
| ! | TATTGATAGAACTGGACTAG+AGG | - | chr3.3:57147492-57147511 | MS.gene55678:CDS | 35.0% |
| ! | TGCACCATTTTGGATTAAAG+TGG | + | chr3.3:57148689-57148708 | None:intergenic | 35.0% |
| !! | AGTGCCACTTTAATCCAAAA+TGG | - | chr3.3:57148682-57148701 | MS.gene55678:intron | 35.0% |
| !! | CATAATAGAAGGTATTGGAC+AGG | + | chr3.3:57147930-57147949 | None:intergenic | 35.0% |
| !!! | CATTTTTGGCTTGGTATTTC+AGG | - | chr3.3:57149261-57149280 | MS.gene55678:CDS | 35.0% |
| AAAAATCGAGGCAAACATCG+GGG | + | chr3.3:57148900-57148919 | None:intergenic | 40.0% | |
| AAAAGCAACAAGAAGGAACC+CGG | + | chr3.3:57146811-57146830 | None:intergenic | 40.0% | |
| AACCAGCAAAAGCAACAAGA+AGG | + | chr3.3:57146818-57146837 | None:intergenic | 40.0% | |
| AACTTTGGGCTGTGCATAAA+GGG | + | chr3.3:57147768-57147787 | None:intergenic | 40.0% | |
| AAGAATCGCTAATGCCACAA+GGG | + | chr3.3:57148382-57148401 | None:intergenic | 40.0% | |
| AATATCGCCGTTCTTCTTCT+GGG | - | chr3.3:57146707-57146726 | MS.gene55678:intron | 40.0% | |
| ACGTAGTTTAAATCCCCTTC+GGG | - | chr3.3:57148639-57148658 | MS.gene55678:intron | 40.0% | |
| AGTTGGTCCCATCATTTGAT+AGG | + | chr3.3:57147999-57148018 | None:intergenic | 40.0% | |
| ATAGTTGAAGGGTTATGGGA+AGG | - | chr3.3:57146675-57146694 | MS.gene55678:CDS | 40.0% | |
| ATCTAGTGTGGATATATGGC+AGG | - | chr3.3:57147573-57147592 | MS.gene55678:CDS | 40.0% | |
| ATTCAGTAATGCAGCACTAC+TGG | - | chr3.3:57147954-57147973 | MS.gene55678:CDS | 40.0% | |
| ATTTGACCTTGTAACCTCAG+TGG | - | chr3.3:57148616-57148635 | MS.gene55678:intron | 40.0% | |
| CAAAAATCGAGGCAAACATC+GGG | + | chr3.3:57148901-57148920 | None:intergenic | 40.0% | |
| CAACGATAGTTGAAGGGTTA+TGG | - | chr3.3:57146670-57146689 | MS.gene55678:CDS | 40.0% | |
| CAACTCGGCAATGTATTTCT+TGG | + | chr3.3:57147873-57147892 | None:intergenic | 40.0% | |
| CAAGTACTCTGATCCTATCA+TGG | - | chr3.3:57148104-57148123 | MS.gene55678:intron | 40.0% | |
| CATAACCCTTCAACTATCGT+TGG | + | chr3.3:57146672-57146691 | None:intergenic | 40.0% | |
| CATCTTCTTCTGCACTTAAG+AGG | + | chr3.3:57146620-57146639 | None:intergenic | 40.0% | |
| CATTGCCAACGATAGTTGAA+GGG | - | chr3.3:57146664-57146683 | MS.gene55678:CDS | 40.0% | |
| CCAAAAATCGAGGCAAACAT+CGG | + | chr3.3:57148902-57148921 | None:intergenic | 40.0% | |
| CTCTTAAGTGCAGAAGAAGA+TGG | - | chr3.3:57146618-57146637 | MS.gene55678:CDS | 40.0% | |
| CTTGCTTTGACTATCTAGTG+TGG | - | chr3.3:57147561-57147580 | MS.gene55678:CDS | 40.0% | |
| GACGTAGTTTAAATCCCCTT+CGG | - | chr3.3:57148638-57148657 | MS.gene55678:intron | 40.0% | |
| GATTTAAACTACGTCCACTG+AGG | + | chr3.3:57148633-57148652 | None:intergenic | 40.0% | |
| GGCAATGTATTTCTTGGTTG+TGG | + | chr3.3:57147867-57147886 | None:intergenic | 40.0% | |
| GTTGGTCCCATCATTTGATA+GGG | + | chr3.3:57147998-57148017 | None:intergenic | 40.0% | |
| TAACTTTGGGCTGTGCATAA+AGG | + | chr3.3:57147769-57147788 | None:intergenic | 40.0% | |
| TAAGAATCGCTAATGCCACA+AGG | + | chr3.3:57148383-57148402 | None:intergenic | 40.0% | |
| TAATATCGCCGTTCTTCTTC+TGG | - | chr3.3:57146706-57146725 | MS.gene55678:intron | 40.0% | |
| TATTTCTTGGTTGTGGACAC+TGG | + | chr3.3:57147860-57147879 | None:intergenic | 40.0% | |
| TCATTGCCAACGATAGTTGA+AGG | - | chr3.3:57146663-57146682 | MS.gene55678:CDS | 40.0% | |
| TGACAATGGAAAAGAGTTGC+AGG | - | chr3.3:57148933-57148952 | MS.gene55678:intron | 40.0% | |
| TGATTCACAACCTTTGACAG+TGG | - | chr3.3:57147603-57147622 | MS.gene55678:CDS | 40.0% | |
| ! | CATGATAGGATCAGAGTACT+TGG | + | chr3.3:57148106-57148125 | None:intergenic | 40.0% |
| ! | CGATGTTTGCCTCGATTTTT+GGG | - | chr3.3:57148900-57148919 | MS.gene55678:intron | 40.0% |
| ! | CTCCTCTACATGTCCATTTT+TGG | - | chr3.3:57148462-57148481 | MS.gene55678:intron | 40.0% |
| ! | GAGAAAACTTCAGCTGGTTT+GGG | - | chr3.3:57146942-57146961 | MS.gene55678:intron | 40.0% |
| ! | TGCAACTCTTTTCCATTGTC+AGG | + | chr3.3:57148934-57148953 | None:intergenic | 40.0% |
| ! | TTTGACAGTGGCTTTACTTG+CGG | - | chr3.3:57147615-57147634 | MS.gene55678:intron | 40.0% |
| !! | TTACTTGCGGCTTTGCTATT+TGG | - | chr3.3:57147628-57147647 | MS.gene55678:intron | 40.0% |
| !! | TTGCTATTTGGCGAGTCTAT+TGG | - | chr3.3:57147640-57147659 | MS.gene55678:intron | 40.0% |
| !!! | CTTAAGAGGCACTCTTTTAC+TGG | + | chr3.3:57146606-57146625 | None:intergenic | 40.0% |
| !!! | TTCCTTCTTGTTGCTTTTGC+TGG | - | chr3.3:57146813-57146832 | MS.gene55678:intron | 40.0% |
| !!! | TTTTGCTGGTTCTAGAGGAA+GGG | - | chr3.3:57146827-57146846 | MS.gene55678:intron | 40.0% |
| AACAAGCTGTACAGGTGAGA+AGG | + | chr3.3:57149306-57149325 | None:intergenic | 45.0% | |
| AGAATCGCTAATGCCACAAG+GGG | + | chr3.3:57148381-57148400 | None:intergenic | 45.0% | |
| ATATCGCCGTTCTTCTTCTG+GGG | - | chr3.3:57146708-57146727 | MS.gene55678:intron | 45.0% | |
| ATCCTATCATGGCAACTGGA+TGG | - | chr3.3:57148115-57148134 | MS.gene55678:intron | 45.0% | |
| ATTGGAATTGTTGGAGCTGC+CGG | - | chr3.3:57147658-57147677 | MS.gene55678:intron | 45.0% | |
| CGTAGTTTAAATCCCCTTCG+GGG | - | chr3.3:57148640-57148659 | MS.gene55678:intron | 45.0% | |
| GCAAGTAAAGCCACTGTCAA+AGG | + | chr3.3:57147616-57147635 | None:intergenic | 45.0% | |
| GCAGTCTTACCCAAAAATCG+AGG | + | chr3.3:57148912-57148931 | None:intergenic | 45.0% | |
| GCTAACAGCGCTTCCAAAAA+TGG | + | chr3.3:57148478-57148497 | None:intergenic | 45.0% | |
| GGAGAAAACTTCAGCTGGTT+TGG | - | chr3.3:57146941-57146960 | MS.gene55678:intron | 45.0% | |
| GGCGAGTCTATTGGAATTGT+TGG | - | chr3.3:57147649-57147668 | MS.gene55678:intron | 45.0% | |
| GTCCCATCATTTGATAGGGA+AGG | + | chr3.3:57147994-57148013 | None:intergenic | 45.0% | |
| GTGTGAGGACTAAGTCACTT+AGG | + | chr3.3:57147746-57147765 | None:intergenic | 45.0% | |
| TAAGACTCCCACTTACAGCA+GGG | + | chr3.3:57148413-57148432 | None:intergenic | 45.0% | |
| TACAACACCAAGTACAAGCC+CGG | + | chr3.3:57147680-57147699 | None:intergenic | 45.0% | |
| TCCTATCATGGCAACTGGAT+GGG | - | chr3.3:57148116-57148135 | MS.gene55678:intron | 45.0% | |
| TCTGATCCTATCATGGCAAC+TGG | - | chr3.3:57148111-57148130 | MS.gene55678:intron | 45.0% | |
| TTAAGACTCCCACTTACAGC+AGG | + | chr3.3:57148414-57148433 | None:intergenic | 45.0% | |
| TTCTCACCTGTACAGCTTGT+TGG | - | chr3.3:57149305-57149324 | MS.gene55678:CDS | 45.0% | |
| ! | CCGATGTTTGCCTCGATTTT+TGG | - | chr3.3:57148899-57148918 | MS.gene55678:intron | 45.0% |
| ! | TCTCACCTGTACAGCTTGTT+GGG | - | chr3.3:57149306-57149325 | MS.gene55678:CDS | 45.0% |
| ! | TGTAGGACTTGTGTTACTCG+AGG | - | chr3.3:57147696-57147715 | MS.gene55678:intron | 45.0% |
| ! | TTCAGGGTTTTCTCGCTGAA+GGG | - | chr3.3:57146916-57146935 | MS.gene55678:intron | 45.0% |
| ! | TTTCAGGGTTTTCTCGCTGA+AGG | - | chr3.3:57146915-57146934 | MS.gene55678:intron | 45.0% |
| !! | AGCATCGACGAGAGCAAATA+TGG | + | chr3.3:57146889-57146908 | None:intergenic | 45.0% |
| !! | TTTGGAAGCGCTGTTAGCTA+TGG | - | chr3.3:57148480-57148499 | MS.gene55678:intron | 45.0% |
| !!! | CTTTTGCTGGTTCTAGAGGA+AGG | - | chr3.3:57146826-57146845 | MS.gene55678:intron | 45.0% |
| !!! | GTTGCTTTTGCTGGTTCTAG+AGG | - | chr3.3:57146822-57146841 | MS.gene55678:intron | 45.0% |
| AACAACGACCCTGCTGTAAG+TGG | - | chr3.3:57148402-57148421 | MS.gene55678:intron | 50.0% | |
| AACTTCTCACTGTGGGGAAG+TGG | - | chr3.3:57148015-57148034 | MS.gene55678:intron | 50.0% | |
| ACAACGACCCTGCTGTAAGT+GGG | - | chr3.3:57148403-57148422 | MS.gene55678:intron | 50.0% | |
| ACCCATCCAGTTGCCATGAT+AGG | + | chr3.3:57148120-57148139 | None:intergenic | 50.0% | |
| ACTTCCCCACAGTGAGAAGT+TGG | + | chr3.3:57148016-57148035 | None:intergenic | 50.0% | |
| ACTTCTCACTGTGGGGAAGT+GGG | - | chr3.3:57148016-57148035 | MS.gene55678:intron | 50.0% | |
| ATGGGACCAACTTCTCACTG+TGG | - | chr3.3:57148007-57148026 | MS.gene55678:intron | 50.0% | |
| CACTTCTTTCATCGCCACCA+TGG | + | chr3.3:57146739-57146758 | None:intergenic | 50.0% | |
| CAGTTGGCACTGTCATGGTT+CGG | - | chr3.3:57148073-57148092 | MS.gene55678:intron | 50.0% | |
| CCCTTCGGGGTAGTTGTAAA+GGG | - | chr3.3:57148653-57148672 | MS.gene55678:intron | 50.0% | |
| CCCTTTACAACTACCCCGAA+GGG | + | chr3.3:57148656-57148675 | None:intergenic | 50.0% | |
| CCTTTACAACTACCCCGAAG+GGG | + | chr3.3:57148655-57148674 | None:intergenic | 50.0% | |
| CTACGTCCACTGAGGTTACA+AGG | + | chr3.3:57148625-57148644 | None:intergenic | 50.0% | |
| GAATCGCTAATGCCACAAGG+GGG | + | chr3.3:57148380-57148399 | None:intergenic | 50.0% | |
| GACGAGAGCAAATATGGCGA+TGG | + | chr3.3:57146883-57146902 | None:intergenic | 50.0% | |
| GGGTTGGAGAAAACTTCAGC+TGG | - | chr3.3:57146936-57146955 | MS.gene55678:intron | 50.0% | |
| TCCCTTTACAACTACCCCGA+AGG | + | chr3.3:57148657-57148676 | None:intergenic | 50.0% | |
| TCGTTTCGTCTCATTCCTGC+CGG | - | chr3.3:57146789-57146808 | MS.gene55678:intron | 50.0% | |
| TGGGACCAACTTCTCACTGT+GGG | - | chr3.3:57148008-57148027 | MS.gene55678:intron | 50.0% | |
| TGGGTAAGACTGCCTGACAA+TGG | - | chr3.3:57148919-57148938 | MS.gene55678:intron | 50.0% | |
| TTGGAATTGTTGGAGCTGCC+GGG | - | chr3.3:57147659-57147678 | MS.gene55678:intron | 50.0% | |
| ! | AAGAGGAAAGGGCGTGTGAA+AGG | - | chr3.3:57148267-57148286 | MS.gene55678:CDS | 50.0% |
| ! | GAAGTGCCCCAGAAGAAGAA+CGG | + | chr3.3:57146717-57146736 | None:intergenic | 50.0% |
| ! | GTCGATGCTGCTTGCTTTCA+GGG | - | chr3.3:57146900-57146919 | MS.gene55678:intron | 50.0% |
| ! | GTGGAAGACGTGCACCATTT+TGG | + | chr3.3:57148699-57148718 | None:intergenic | 50.0% |
| !! | CTCACCTGTACAGCTTGTTG+GGG | - | chr3.3:57149307-57149326 | MS.gene55678:CDS | 50.0% |
| !! | GGGCTTGTACTTGGTGTTGT+AGG | - | chr3.3:57147679-57147698 | MS.gene55678:intron | 50.0% |
| !! | TTCCTTCTGGCTTCCATGCT+TGG | - | chr3.3:57146853-57146872 | MS.gene55678:intron | 50.0% |
| AGCCAAGCATGGAAGCCAGA+AGG | + | chr3.3:57146858-57146877 | None:intergenic | 55.0% | |
| CATGGCAGTTGGCACTGTCA+TGG | - | chr3.3:57148068-57148087 | MS.gene55678:intron | 55.0% | |
| CCCCTTCGGGGTAGTTGTAA+AGG | - | chr3.3:57148652-57148671 | MS.gene55678:intron | 55.0% | |
| CGTTTCGTCTCATTCCTGCC+GGG | - | chr3.3:57146790-57146809 | MS.gene55678:intron | 55.0% | |
| CTTCTCACTGTGGGGAAGTG+GGG | - | chr3.3:57148017-57148036 | MS.gene55678:intron | 55.0% | |
| GCTTCTTGCAGCTCAGAGCA+TGG | - | chr3.3:57148050-57148069 | MS.gene55678:intron | 55.0% | |
| GGGACCAACTTCTCACTGTG+GGG | - | chr3.3:57148009-57148028 | MS.gene55678:intron | 55.0% | |
| ! | CGTCGATGCTGCTTGCTTTC+AGG | - | chr3.3:57146899-57146918 | MS.gene55678:intron | 55.0% |
| ! | GGCTGTGCATAAAGGGTGTG+AGG | + | chr3.3:57147761-57147780 | None:intergenic | 55.0% |
| ! | GGGTTTTCTCGCTGAAGGGT+TGG | - | chr3.3:57146920-57146939 | MS.gene55678:intron | 55.0% |
| ! | TATTGGTGGTCTCCCCCTTG+TGG | - | chr3.3:57148365-57148384 | MS.gene55678:CDS | 55.0% |
| ! | TTGGCACTGTCATGGTTCGG+TGG | - | chr3.3:57148076-57148095 | MS.gene55678:intron | 55.0% |
| !! | AGAGGAAGGGCGTTTCCTTC+TGG | - | chr3.3:57146840-57146859 | MS.gene55678:intron | 55.0% |
| !! | CTTCTTCTGGGGCACTTCCA+TGG | - | chr3.3:57146719-57146738 | MS.gene55678:intron | 55.0% |
| !! | TGGCACTGTCATGGTTCGGT+GGG | - | chr3.3:57148077-57148096 | MS.gene55678:intron | 55.0% |
| GCAACAAGAAGGAACCCGGC+AGG | + | chr3.3:57146807-57146826 | None:intergenic | 60.0% | |
| GCAGCTCAGAGCATGGCAGT+TGG | - | chr3.3:57148057-57148076 | MS.gene55678:intron | 60.0% | |
| TGGCGATGGAGAGCCAAGCA+TGG | + | chr3.3:57146869-57146888 | None:intergenic | 60.0% | |
| TGTGGGGAAGTGGGGAGTTG+TGG | - | chr3.3:57148025-57148044 | MS.gene55678:intron | 60.0% | |
| !! | CCTGTACAGCTTGTTGGGGC+CGG | - | chr3.3:57149311-57149330 | MS.gene55678:CDS | 60.0% |
| !! | CTTCTGGGGCACTTCCATGG+TGG | - | chr3.3:57146722-57146741 | MS.gene55678:intron | 60.0% |
| CCGGCCCCAACAAGCTGTAC+AGG | + | chr3.3:57149314-57149333 | None:intergenic | 65.0% | |
| GGAGCTGCCGGGCTTGTACT+TGG | - | chr3.3:57147670-57147689 | MS.gene55678:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 57146594 | 57149385 | 57146594 | ID=MS.gene55678 |
| chr3.3 | mRNA | 57146594 | 57149385 | 57146594 | ID=MS.gene55678.t1;Parent=MS.gene55678 |
| chr3.3 | exon | 57149011 | 57149385 | 57149011 | ID=MS.gene55678.t1.exon1;Parent=MS.gene55678.t1 |
| chr3.3 | CDS | 57149011 | 57149385 | 57149011 | ID=cds.MS.gene55678.t1;Parent=MS.gene55678.t1 |
| chr3.3 | exon | 57148262 | 57148384 | 57148262 | ID=MS.gene55678.t1.exon2;Parent=MS.gene55678.t1 |
| chr3.3 | CDS | 57148262 | 57148384 | 57148262 | ID=cds.MS.gene55678.t1;Parent=MS.gene55678.t1 |
| chr3.3 | exon | 57147842 | 57147991 | 57147842 | ID=MS.gene55678.t1.exon3;Parent=MS.gene55678.t1 |
| chr3.3 | CDS | 57147842 | 57147991 | 57147842 | ID=cds.MS.gene55678.t1;Parent=MS.gene55678.t1 |
| chr3.3 | exon | 57147451 | 57147622 | 57147451 | ID=MS.gene55678.t1.exon4;Parent=MS.gene55678.t1 |
| chr3.3 | CDS | 57147451 | 57147622 | 57147451 | ID=cds.MS.gene55678.t1;Parent=MS.gene55678.t1 |
| chr3.3 | exon | 57147058 | 57147118 | 57147058 | ID=MS.gene55678.t1.exon5;Parent=MS.gene55678.t1 |
| chr3.3 | CDS | 57147058 | 57147118 | 57147058 | ID=cds.MS.gene55678.t1;Parent=MS.gene55678.t1 |
| chr3.3 | exon | 57146594 | 57146696 | 57146594 | ID=MS.gene55678.t1.exon6;Parent=MS.gene55678.t1 |
| chr3.3 | CDS | 57146594 | 57146696 | 57146594 | ID=cds.MS.gene55678.t1;Parent=MS.gene55678.t1 |
| Gene Sequence |
| Protein sequence |
