Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34038.t1 | XP_003591899.1 | 98.6 | 280 | 4 | 0 | 22 | 301 | 1 | 280 | 1.90E-155 | 558.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34038.t1 | G7I387 | 98.6 | 280 | 4 | 0 | 22 | 301 | 1 | 280 | 1.3e-155 | 558.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene34038.t1 | TR | GNAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene34038 | 0.812258 | 4.64E-51 | -1.69E-46 |
| MS.gene049171 | MS.gene34038 | 0.876276 | 1.59E-68 | -1.69E-46 |
| MS.gene049222 | MS.gene34038 | 0.858922 | 5.91E-63 | -1.69E-46 |
| MS.gene049232 | MS.gene34038 | 0.804745 | 1.86E-49 | -1.69E-46 |
| MS.gene049257 | MS.gene34038 | 0.848222 | 7.03E-60 | -1.69E-46 |
| MS.gene049285 | MS.gene34038 | 0.825212 | 5.30E-54 | -1.69E-46 |
| MS.gene049320 | MS.gene34038 | 0.806862 | 6.69E-50 | -1.69E-46 |
| MS.gene049373 | MS.gene34038 | 0.821186 | 4.62E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene34038 | 0.823378 | 1.43E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene34038 | 0.852418 | 4.68E-61 | -1.69E-46 |
| MS.gene049865 | MS.gene34038 | 0.851079 | 1.12E-60 | -1.69E-46 |
| MS.gene05010 | MS.gene34038 | 0.827993 | 1.15E-54 | -1.69E-46 |
| MS.gene050170 | MS.gene34038 | 0.91699 | 9.14E-86 | -1.69E-46 |
| MS.gene050323 | MS.gene34038 | 0.849692 | 2.75E-60 | -1.69E-46 |
| MS.gene050496 | MS.gene34038 | 0.849577 | 2.96E-60 | -1.69E-46 |
| MS.gene050504 | MS.gene34038 | 0.851639 | 7.79E-61 | -1.69E-46 |
| MS.gene050518 | MS.gene34038 | 0.815452 | 9.18E-52 | -1.69E-46 |
| MS.gene050538 | MS.gene34038 | 0.808121 | 3.62E-50 | -1.69E-46 |
| MS.gene050553 | MS.gene34038 | 0.822365 | 2.46E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene34038 | 0.866176 | 3.45E-65 | -1.69E-46 |
| MS.gene050612 | MS.gene34038 | 0.833297 | 5.78E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene34038 | 0.813689 | 2.25E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene34038 | 0.833191 | 6.14E-56 | -1.69E-46 |
| MS.gene050747 | MS.gene34038 | 0.857443 | 1.63E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene34038 | 0.815667 | 8.22E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene34038 | 0.838691 | 2.47E-57 | -1.69E-46 |
| MS.gene05081 | MS.gene34038 | 0.882965 | 6.69E-71 | -1.69E-46 |
| MS.gene050868 | MS.gene34038 | 0.890736 | 7.52E-74 | -1.69E-46 |
| MS.gene050871 | MS.gene34038 | 0.88933 | 2.67E-73 | -1.69E-46 |
| MS.gene050876 | MS.gene34038 | 0.80426 | 2.35E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene34038 | 0.894407 | 2.54E-75 | -1.69E-46 |
| MS.gene050950 | MS.gene34038 | 0.850582 | 1.55E-60 | -1.69E-46 |
| MS.gene050986 | MS.gene34038 | 0.824723 | 6.92E-54 | -1.69E-46 |
| MS.gene051268 | MS.gene34038 | 0.8434 | 1.43E-58 | -1.69E-46 |
| MS.gene051317 | MS.gene34038 | 0.858553 | 7.61E-63 | -1.69E-46 |
| MS.gene051552 | MS.gene34038 | -0.838812 | 2.30E-57 | -1.69E-46 |
| MS.gene051734 | MS.gene34038 | 0.801567 | 8.47E-49 | -1.69E-46 |
| MS.gene051761 | MS.gene34038 | -0.814862 | 1.24E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene34038 | 0.875192 | 3.74E-68 | -1.69E-46 |
| MS.gene051858 | MS.gene34038 | 0.810735 | 9.94E-51 | -1.69E-46 |
| MS.gene051874 | MS.gene34038 | 0.801712 | 7.91E-49 | -1.69E-46 |
| MS.gene051941 | MS.gene34038 | 0.850879 | 1.28E-60 | -1.69E-46 |
| MS.gene051973 | MS.gene34038 | -0.801988 | 6.94E-49 | -1.69E-46 |
| MS.gene052015 | MS.gene34038 | -0.829909 | 3.95E-55 | -1.69E-46 |
| MS.gene052164 | MS.gene34038 | 0.848439 | 6.12E-60 | -1.69E-46 |
| MS.gene052211 | MS.gene34038 | -0.803433 | 3.49E-49 | -1.69E-46 |
| MS.gene052346 | MS.gene34038 | 0.81848 | 1.92E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene34038 | 0.844183 | 8.85E-59 | -1.69E-46 |
| MS.gene052486 | MS.gene34038 | 0.855986 | 4.36E-62 | -1.69E-46 |
| MS.gene052494 | MS.gene34038 | -0.835027 | 2.13E-56 | -1.69E-46 |
| MS.gene052501 | MS.gene34038 | 0.828954 | 6.75E-55 | -1.69E-46 |
| MS.gene052503 | MS.gene34038 | 0.864548 | 1.12E-64 | -1.69E-46 |
| MS.gene052505 | MS.gene34038 | 0.814848 | 1.25E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene34038 | 0.826604 | 2.48E-54 | -1.69E-46 |
| MS.gene052606 | MS.gene34038 | -0.827055 | 1.93E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene34038 | 0.828363 | 9.37E-55 | -1.69E-46 |
| MS.gene052822 | MS.gene34038 | 0.81496 | 1.18E-51 | -1.69E-46 |
| MS.gene052823 | MS.gene34038 | 0.866809 | 2.17E-65 | -1.69E-46 |
| MS.gene052825 | MS.gene34038 | 0.870811 | 1.10E-66 | -1.69E-46 |
| MS.gene052870 | MS.gene34038 | 0.806823 | 6.82E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene34038 | 0.813415 | 2.59E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene34038 | 0.867519 | 1.29E-65 | -1.69E-46 |
| MS.gene052982 | MS.gene34038 | 0.809364 | 1.96E-50 | -1.69E-46 |
| MS.gene053097 | MS.gene34038 | -0.853304 | 2.61E-61 | -1.69E-46 |
| MS.gene053203 | MS.gene34038 | 0.876272 | 1.59E-68 | -1.69E-46 |
| MS.gene053207 | MS.gene34038 | 0.803518 | 3.35E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene34038 | 0.801245 | 9.86E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene34038 | 0.80038 | 1.48E-48 | -1.69E-46 |
| MS.gene053420 | MS.gene34038 | -0.801712 | 7.91E-49 | -1.69E-46 |
| MS.gene053421 | MS.gene34038 | -0.824955 | 6.10E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene34038 | 0.822553 | 2.23E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene34038 | 0.871341 | 7.36E-67 | -1.69E-46 |
| MS.gene053480 | MS.gene34038 | 0.871036 | 9.28E-67 | -1.69E-46 |
| MS.gene053574 | MS.gene34038 | 0.82086 | 5.49E-53 | -1.69E-46 |
| MS.gene053626 | MS.gene34038 | 0.803432 | 3.50E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene34038 | 0.802423 | 5.65E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene34038 | 0.883563 | 4.04E-71 | -1.69E-46 |
| MS.gene053997 | MS.gene34038 | 0.839078 | 1.96E-57 | -1.69E-46 |
| MS.gene054107 | MS.gene34038 | 0.819212 | 1.31E-52 | -1.69E-46 |
| MS.gene054343 | MS.gene34038 | 0.816855 | 4.46E-52 | -1.69E-46 |
| MS.gene054344 | MS.gene34038 | 0.874675 | 5.61E-68 | -1.69E-46 |
| MS.gene054408 | MS.gene34038 | 0.846133 | 2.63E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene34038 | 0.838391 | 2.96E-57 | -1.69E-46 |
| MS.gene054600 | MS.gene34038 | 0.834497 | 2.90E-56 | -1.69E-46 |
| MS.gene054706 | MS.gene34038 | -0.8207 | 5.97E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene34038 | 0.88613 | 4.47E-72 | -1.69E-46 |
| MS.gene054851 | MS.gene34038 | -0.825529 | 4.46E-54 | -1.69E-46 |
| MS.gene054884 | MS.gene34038 | -0.817825 | 2.70E-52 | -1.69E-46 |
| MS.gene054927 | MS.gene34038 | 0.819345 | 1.22E-52 | -1.69E-46 |
| MS.gene05494 | MS.gene34038 | 0.828238 | 1.00E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene34038 | 0.828581 | 8.30E-55 | -1.69E-46 |
| MS.gene055158 | MS.gene34038 | -0.820878 | 5.43E-53 | -1.69E-46 |
| MS.gene055159 | MS.gene34038 | -0.83056 | 2.74E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene34038 | 0.831838 | 1.33E-55 | -1.69E-46 |
| MS.gene055224 | MS.gene34038 | 0.823121 | 1.64E-53 | -1.69E-46 |
| MS.gene055289 | MS.gene34038 | 0.809941 | 1.48E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene34038 | 0.83166 | 1.47E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene34038 | 0.84369 | 1.20E-58 | -1.69E-46 |
| MS.gene055577 | MS.gene34038 | 0.877226 | 7.45E-69 | -1.69E-46 |
| MS.gene055741 | MS.gene34038 | 0.830813 | 2.38E-55 | -1.69E-46 |
| MS.gene055744 | MS.gene34038 | 0.821141 | 4.73E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene34038 | 0.854179 | 1.46E-61 | -1.69E-46 |
| MS.gene055750 | MS.gene34038 | 0.843098 | 1.73E-58 | -1.69E-46 |
| MS.gene055751 | MS.gene34038 | 0.845902 | 3.04E-59 | -1.69E-46 |
| MS.gene05589 | MS.gene34038 | 0.906244 | 1.82E-80 | -1.69E-46 |
| MS.gene055941 | MS.gene34038 | 0.828701 | 7.76E-55 | -1.69E-46 |
| MS.gene056040 | MS.gene34038 | 0.839 | 2.06E-57 | -1.69E-46 |
| MS.gene056166 | MS.gene34038 | 0.849926 | 2.36E-60 | -1.69E-46 |
| MS.gene056387 | MS.gene34038 | 0.854612 | 1.10E-61 | -1.69E-46 |
| MS.gene056409 | MS.gene34038 | 0.818831 | 1.60E-52 | -1.69E-46 |
| MS.gene056450 | MS.gene34038 | 0.80767 | 4.51E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene34038 | 0.873833 | 1.08E-67 | -1.69E-46 |
| MS.gene056510 | MS.gene34038 | 0.842073 | 3.23E-58 | -1.69E-46 |
| MS.gene056610 | MS.gene34038 | 0.833604 | 4.85E-56 | -1.69E-46 |
| MS.gene056692 | MS.gene34038 | 0.829791 | 4.22E-55 | -1.69E-46 |
| MS.gene056694 | MS.gene34038 | -0.815485 | 9.02E-52 | -1.69E-46 |
| MS.gene056877 | MS.gene34038 | 0.83181 | 1.35E-55 | -1.69E-46 |
| MS.gene056878 | MS.gene34038 | 0.805917 | 1.06E-49 | -1.69E-46 |
| MS.gene056946 | MS.gene34038 | 0.811658 | 6.27E-51 | -1.69E-46 |
| MS.gene057019 | MS.gene34038 | 0.836078 | 1.16E-56 | -1.69E-46 |
| MS.gene057048 | MS.gene34038 | 0.806864 | 6.69E-50 | -1.69E-46 |
| MS.gene057332 | MS.gene34038 | 0.843772 | 1.14E-58 | -1.69E-46 |
| MS.gene057658 | MS.gene34038 | 0.863517 | 2.35E-64 | -1.69E-46 |
| MS.gene057831 | MS.gene34038 | 0.866616 | 2.50E-65 | -1.69E-46 |
| MS.gene057856 | MS.gene34038 | 0.811397 | 7.14E-51 | -1.69E-46 |
| MS.gene057857 | MS.gene34038 | 0.80852 | 2.97E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene34038 | 0.833763 | 4.42E-56 | -1.69E-46 |
| MS.gene058130 | MS.gene34038 | 0.810284 | 1.24E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene34038 | 0.858039 | 1.08E-62 | -1.69E-46 |
| MS.gene058171 | MS.gene34038 | -0.807107 | 5.94E-50 | -1.69E-46 |
| MS.gene058173 | MS.gene34038 | -0.803089 | 4.12E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene34038 | -0.810603 | 1.06E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene34038 | -0.841571 | 4.38E-58 | -1.69E-46 |
| MS.gene058338 | MS.gene34038 | 0.83659 | 8.56E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene34038 | 0.892752 | 1.19E-74 | -1.69E-46 |
| MS.gene058418 | MS.gene34038 | -0.87022 | 1.72E-66 | -1.69E-46 |
| MS.gene058419 | MS.gene34038 | 0.826781 | 2.25E-54 | -1.69E-46 |
| MS.gene058444 | MS.gene34038 | 0.807938 | 3.96E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene34038 | 0.844563 | 7.00E-59 | -1.69E-46 |
| MS.gene058773 | MS.gene34038 | 0.835322 | 1.79E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene34038 | 0.875742 | 2.42E-68 | -1.69E-46 |
| MS.gene059022 | MS.gene34038 | 0.841263 | 5.28E-58 | -1.69E-46 |
| MS.gene059023 | MS.gene34038 | 0.9076 | 4.25E-81 | -1.69E-46 |
| MS.gene059103 | MS.gene34038 | -0.834044 | 3.76E-56 | -1.69E-46 |
| MS.gene05914 | MS.gene34038 | 0.855497 | 6.06E-62 | -1.69E-46 |
| MS.gene059303 | MS.gene34038 | 0.875818 | 2.28E-68 | -1.69E-46 |
| MS.gene059480 | MS.gene34038 | -0.833254 | 5.93E-56 | -1.69E-46 |
| MS.gene059526 | MS.gene34038 | -0.812236 | 4.69E-51 | -1.69E-46 |
| MS.gene05960 | MS.gene34038 | -0.845749 | 3.34E-59 | -1.69E-46 |
| MS.gene059667 | MS.gene34038 | 0.833015 | 6.80E-56 | -1.69E-46 |
| MS.gene059677 | MS.gene34038 | 0.831602 | 1.52E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene34038 | 0.832694 | 8.17E-56 | -1.69E-46 |
| MS.gene059756 | MS.gene34038 | 0.835881 | 1.30E-56 | -1.69E-46 |
| MS.gene059801 | MS.gene34038 | 0.83703 | 6.61E-57 | -1.69E-46 |
| MS.gene059837 | MS.gene34038 | 0.835398 | 1.72E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene34038 | 0.828952 | 6.75E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene34038 | 0.802887 | 4.53E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene34038 | 0.819503 | 1.12E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene34038 | 0.848052 | 7.84E-60 | -1.69E-46 |
| MS.gene06000 | MS.gene34038 | 0.887862 | 9.83E-73 | -1.69E-46 |
| MS.gene060187 | MS.gene34038 | -0.823122 | 1.64E-53 | -1.69E-46 |
| MS.gene06027 | MS.gene34038 | 0.844919 | 5.61E-59 | -1.69E-46 |
| MS.gene060372 | MS.gene34038 | 0.806239 | 9.06E-50 | -1.69E-46 |
| MS.gene060485 | MS.gene34038 | 0.809496 | 1.84E-50 | -1.69E-46 |
| MS.gene060593 | MS.gene34038 | -0.828789 | 7.40E-55 | -1.69E-46 |
| MS.gene060595 | MS.gene34038 | -0.848596 | 5.54E-60 | -1.69E-46 |
| MS.gene060703 | MS.gene34038 | 0.802759 | 4.82E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene34038 | 0.871038 | 9.26E-67 | -1.69E-46 |
| MS.gene060778 | MS.gene34038 | 0.847782 | 9.30E-60 | -1.69E-46 |
| MS.gene06077 | MS.gene34038 | 0.891348 | 4.31E-74 | -1.69E-46 |
| MS.gene060872 | MS.gene34038 | -0.804002 | 2.66E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene34038 | 0.846806 | 1.72E-59 | -1.69E-46 |
| MS.gene060982 | MS.gene34038 | 0.870197 | 1.75E-66 | -1.69E-46 |
| MS.gene061044 | MS.gene34038 | -0.827739 | 1.32E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene34038 | 0.820791 | 5.69E-53 | -1.69E-46 |
| MS.gene061231 | MS.gene34038 | 0.830325 | 3.13E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34038.t1 | MTR_1g095000 | 98.571 | 280 | 4 | 0 | 22 | 301 | 1 | 280 | 0.0 | 574 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34038.t1 | AT2G39000 | 66.323 | 291 | 75 | 5 | 22 | 298 | 1 | 282 | 1.49e-136 | 388 |
| MS.gene34038.t1 | AT2G39000 | 76.444 | 225 | 53 | 0 | 74 | 298 | 2 | 226 | 2.52e-133 | 378 |
| MS.gene34038.t1 | AT2G39000 | 63.819 | 199 | 49 | 5 | 22 | 206 | 1 | 190 | 4.51e-80 | 241 |
| MS.gene34038.t1 | AT2G39000 | 62.814 | 199 | 49 | 5 | 22 | 205 | 1 | 189 | 1.62e-79 | 241 |
Find 68 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGATCAAACTTTCTTATT+TGG | 0.151315 | 1.4:-73969714 | MS.gene34038:CDS |
| ACCTGTCTGGTTGCTGTTAT+TGG | 0.195810 | 1.4:-73969744 | MS.gene34038:CDS |
| TTTCAAATCTATAAAGGTTC+CGG | 0.297267 | 1.4:-73968320 | MS.gene34038:CDS |
| TTTGATGTGTTTATAGGTTT+CGG | 0.302342 | 1.4:+73971392 | None:intergenic |
| TGTCGCAGAGGCCCCTTTCT+AGG | 0.313734 | 1.4:+73969591 | None:intergenic |
| GCAAGGTTTCAAATCTATAA+AGG | 0.323365 | 1.4:-73968326 | MS.gene34038:CDS |
| AATCAACTACTTTACCATCT+TGG | 0.323444 | 1.4:-73971340 | MS.gene34038:CDS |
| TCTAATGGAAATGAATATTC+AGG | 0.338599 | 1.4:+73969837 | None:intergenic |
| ATCAACTACTTTACCATCTT+GGG | 0.351438 | 1.4:-73971339 | MS.gene34038:CDS |
| AGGCAAGAATAGAGGATTGT+TGG | 0.356437 | 1.4:-73969893 | MS.gene34038:CDS |
| ATCCTCAACACAAAATCTAA+TGG | 0.371362 | 1.4:+73969822 | None:intergenic |
| GGCACGACATCCCCAACTTC+TGG | 0.376576 | 1.4:+73968402 | None:intergenic |
| TTTCTTACTCCCTCTCAATC+AGG | 0.386333 | 1.4:-73971290 | MS.gene34038:intron |
| AGTGAAGACTTCAAGATTGC+GGG | 0.393136 | 1.4:-73969690 | MS.gene34038:CDS |
| GCCTCTCTAACAGTGATCTC+AGG | 0.394323 | 1.4:+73969912 | None:intergenic |
| GGCAAGAATAGAGGATTGTT+GGG | 0.399207 | 1.4:-73969892 | MS.gene34038:CDS |
| TTCAAATCTATAAAGGTTCC+GGG | 0.414198 | 1.4:-73968319 | MS.gene34038:CDS |
| TGTGTTGAGGATGGATAGAT+TGG | 0.415569 | 1.4:-73969811 | MS.gene34038:CDS |
| AGAATCACAAGCCAGAAGTT+GGG | 0.428773 | 1.4:-73968413 | MS.gene34038:CDS |
| AGGTTCCGGGAGGAGCTAAC+TGG | 0.431391 | 1.4:-73968306 | MS.gene34038:CDS |
| AGCTAAACAATTGGTGGCTA+AGG | 0.435007 | 1.4:-73968437 | MS.gene34038:CDS |
| TGCAGACTTTCTACCTAGAA+AGG | 0.446932 | 1.4:-73969604 | MS.gene34038:CDS |
| ATGAAGTTGAACTTCACATC+TGG | 0.450823 | 1.4:+73968265 | None:intergenic |
| CAGAATCACAAGCCAGAAGT+TGG | 0.456663 | 1.4:-73968414 | MS.gene34038:CDS |
| GCAGGATTCTCTTTACCAAA+TGG | 0.460775 | 1.4:-73969777 | MS.gene34038:CDS |
| GAAAGGAATAGCTAAACAAT+TGG | 0.467703 | 1.4:-73968446 | MS.gene34038:CDS |
| AAAGAAAATTCATGAGATGA+TGG | 0.481589 | 1.4:+73971311 | None:intergenic |
| GCAGACTTTCTACCTAGAAA+GGG | 0.481732 | 1.4:-73969603 | MS.gene34038:CDS |
| TAGATTTGAAACCTTGCCCT+TGG | 0.481800 | 1.4:+73968332 | None:intergenic |
| TGGTATAACTTTGTTGCCGC+AGG | 0.491255 | 1.4:+73968352 | None:intergenic |
| AGATTGGTGGCTATGTTAGC+AGG | 0.496959 | 1.4:-73969795 | MS.gene34038:CDS |
| GAACAAATCAACAACTTGAC+TGG | 0.498714 | 1.4:+73969947 | None:intergenic |
| GTGGTATTGACCGCATTTCG+TGG | 0.521118 | 1.4:+73971432 | None:intergenic |
| TGTTAGAGAGGCAAGAATAG+AGG | 0.524179 | 1.4:-73969901 | MS.gene34038:CDS |
| CTCAACAAGGGATATGTGGC+TGG | 0.532427 | 1.4:-73969648 | MS.gene34038:CDS |
| TATTGACCGCATTTCGTGGA+GGG | 0.534157 | 1.4:+73971436 | None:intergenic |
| GCCAATAACAGCAACCAGAC+AGG | 0.535502 | 1.4:+73969743 | None:intergenic |
| AATAGAGGATTGTTGGGAAG+TGG | 0.538776 | 1.4:-73969886 | MS.gene34038:CDS |
| GAATCACAAGCCAGAAGTTG+GGG | 0.540089 | 1.4:-73968412 | MS.gene34038:CDS |
| AAGCCTCAACAAGGGATATG+TGG | 0.555870 | 1.4:-73969652 | MS.gene34038:CDS |
| AGGAATAGCTAAACAATTGG+TGG | 0.557067 | 1.4:-73968443 | MS.gene34038:CDS |
| CCTCTCTAACAGTGATCTCA+GGG | 0.558058 | 1.4:+73969913 | None:intergenic |
| TGGTTGCAAAAGAACCTGTC+TGG | 0.566369 | 1.4:-73969757 | MS.gene34038:CDS |
| CCCTGAGATCACTGTTAGAG+AGG | 0.573199 | 1.4:-73969913 | MS.gene34038:CDS |
| AAGTGAAGACTTCAAGATTG+CGG | 0.578803 | 1.4:-73969691 | MS.gene34038:CDS |
| GTTGAGGATGGATAGATTGG+TGG | 0.579094 | 1.4:-73969808 | MS.gene34038:CDS |
| AGGGGCCTCTGCGACAGAGA+AGG | 0.581862 | 1.4:-73969584 | MS.gene34038:intron |
| TGAGGCCAGTTAGCTCCTCC+CGG | 0.584487 | 1.4:+73968301 | None:intergenic |
| TTGTTGTTGTTGCTTACAAG+AGG | 0.600254 | 1.4:+73971485 | None:intergenic |
| CAGCCACATATCCCTTGTTG+AGG | 0.606889 | 1.4:+73969649 | None:intergenic |
| GAAATGCGGTCAATACCACT+TGG | 0.610789 | 1.4:-73971428 | MS.gene34038:CDS |
| ACAAAGTTATACCAAGGGCA+AGG | 0.614543 | 1.4:-73968343 | MS.gene34038:CDS |
| TATAGGTTTCGGAGATACTG+AGG | 0.630791 | 1.4:+73971403 | None:intergenic |
| GTATTGACCGCATTTCGTGG+AGG | 0.631265 | 1.4:+73971435 | None:intergenic |
| TGGGAAATTAAGCCTCAACA+AGG | 0.631474 | 1.4:-73969661 | MS.gene34038:CDS |
| TAAATCGCAGTGTAATGCAA+TGG | 0.632285 | 1.4:+73968381 | None:intergenic |
| CAGACTTTCTACCTAGAAAG+GGG | 0.636163 | 1.4:-73969602 | MS.gene34038:CDS |
| AATTGCATACATATCAAATG+TGG | 0.643430 | 1.4:-73968491 | MS.gene34038:CDS |
| CGGCAACAAAGTTATACCAA+GGG | 0.644825 | 1.4:-73968348 | MS.gene34038:CDS |
| AGACAACCCTCCACGAAATG+CGG | 0.648290 | 1.4:-73971442 | MS.gene34038:CDS |
| GCGGCAACAAAGTTATACCA+AGG | 0.651915 | 1.4:-73968349 | MS.gene34038:CDS |
| ACTCACCTTCTCTGTCGCAG+AGG | 0.668717 | 1.4:+73969579 | None:intergenic |
| GGGAAATTAAGCCTCAACAA+GGG | 0.686786 | 1.4:-73969660 | MS.gene34038:CDS |
| CTGCGATTTACGAAATCCTG+CGG | 0.698179 | 1.4:-73968368 | MS.gene34038:CDS |
| GATGATGGTGAAACCCAAGA+TGG | 0.699762 | 1.4:+73971326 | None:intergenic |
| GGAGATACTGAGGTTCCAAG+TGG | 0.704704 | 1.4:+73971413 | None:intergenic |
| AAATCTATAAAGGTTCCGGG+AGG | 0.724022 | 1.4:-73968316 | MS.gene34038:CDS |
| CTCTCTAACAGTGATCTCAG+GGG | 0.746520 | 1.4:+73969914 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAATTTTAACATGTTT+TGG | + | chr1.4:73970448-73970467 | None:intergenic | 10.0% |
| !!! | TTCTTTGTTTTTTTTTTTTA+AGG | - | chr1.4:73968479-73968498 | MS.gene34038:CDS | 10.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr1.4:73969338-73969319 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr1.4:73969339-73969320 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | + | chr1.4:73969098-73969117 | None:intergenic | 15.0% |
| !! | TTATGTATAAAAACTATTGT+AGG | - | chr1.4:73971200-73971219 | MS.gene34038:intron | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr1.4:73969229-73969248 | MS.gene34038:intron | 15.0% |
| !!! | AAACTGATTAATTTTGTTAT+TGG | - | chr1.4:73968535-73968554 | MS.gene34038:intron | 15.0% |
| !!! | ACTTTTTCAAGTTTTTAATT+TGG | - | chr1.4:73968454-73968473 | MS.gene34038:CDS | 15.0% |
| !!! | ATAAAAAGTAGTTTGTATTT+TGG | + | chr1.4:73970402-73970421 | None:intergenic | 15.0% |
| !!! | GCATGTTTTTAAATAATTTT+GGG | + | chr1.4:73969601-73969620 | None:intergenic | 15.0% |
| !!! | TAATTAACCCTATTTTAAAT+TGG | - | chr1.4:73969384-73969403 | MS.gene34038:intron | 15.0% |
| !!! | TGCATGTTTTTAAATAATTT+TGG | + | chr1.4:73969602-73969621 | None:intergenic | 15.0% |
| !!! | TGTATCTTTTTCTTATAATT+GGG | + | chr1.4:73970642-73970661 | None:intergenic | 15.0% |
| !!! | TTGTATCTTTTTCTTATAAT+TGG | + | chr1.4:73970643-73970662 | None:intergenic | 15.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | + | chr1.4:73968967-73968986 | None:intergenic | 20.0% |
| !! | AAATTCTAAGCTTGATTAAT+AGG | - | chr1.4:73969440-73969459 | MS.gene34038:intron | 20.0% |
| !! | AACATGTATTTGAATACTAT+CGG | + | chr1.4:73969411-73969430 | None:intergenic | 20.0% |
| !! | ACCTATTTATTTACTACAAT+TGG | - | chr1.4:73968741-73968760 | MS.gene34038:intron | 20.0% |
| !! | ATCAAAATTATAGCATTAAG+TGG | - | chr1.4:73970794-73970813 | MS.gene34038:intron | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | + | chr1.4:73968968-73968987 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | + | chr1.4:73969063-73969082 | None:intergenic | 20.0% |
| !!! | ATTTAATTTAGAGTCATGTT+TGG | - | chr1.4:73970763-73970782 | MS.gene34038:intron | 20.0% |
| !!! | GAAATTTTTGATGTGTTTAT+AGG | + | chr1.4:73968336-73968355 | None:intergenic | 20.0% |
| !!! | TAGTTAGGTAGTATTTTAAA+GGG | - | chr1.4:73968813-73968832 | MS.gene34038:intron | 20.0% |
| !!! | TATAAGGTCTCTATTTTATA+GGG | + | chr1.4:73968874-73968893 | None:intergenic | 20.0% |
| !!! | TATGTTTCTAACTATGTATA+AGG | - | chr1.4:73971103-73971122 | MS.gene34038:intron | 20.0% |
| !!! | TTAGTTAGGTAGTATTTTAA+AGG | - | chr1.4:73968812-73968831 | MS.gene34038:intron | 20.0% |
| !!! | TTATAAGGTCTCTATTTTAT+AGG | + | chr1.4:73968875-73968894 | None:intergenic | 20.0% |
| !!! | TTTAATTTAGAGTCATGTTT+GGG | - | chr1.4:73970764-73970783 | MS.gene34038:intron | 20.0% |
| !!! | TTTTAAGGAATTTACTAGAT+GGG | - | chr1.4:73968494-73968513 | MS.gene34038:CDS | 20.0% |
| !!! | TTTTTAAGGAATTTACTAGA+TGG | - | chr1.4:73968493-73968512 | MS.gene34038:CDS | 20.0% |
| ! | AAAGAAAATTCATGAGATGA+TGG | + | chr1.4:73968411-73968430 | None:intergenic | 25.0% |
| ! | AATTGCATACATATCAAATG+TGG | - | chr1.4:73971228-73971247 | MS.gene34038:intron | 25.0% |
| ! | AGAGAAAAATTTAGACAGAA+AGG | - | chr1.4:73971256-73971275 | MS.gene34038:intron | 25.0% |
| ! | AGATAACTTGAAAATTACAC+AGG | + | chr1.4:73970364-73970383 | None:intergenic | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | + | chr1.4:73968934-73968953 | None:intergenic | 25.0% |
| ! | ATATGGAATAGATGCATTAA+AGG | + | chr1.4:73970713-73970732 | None:intergenic | 25.0% |
| ! | ATCTATTCCATATAAACAGT+AGG | - | chr1.4:73970720-73970739 | MS.gene34038:intron | 25.0% |
| ! | ATGCATTAAAGGACAAAATA+AGG | + | chr1.4:73970702-73970721 | None:intergenic | 25.0% |
| ! | CAAAGTTAACATCACAAATT+AGG | + | chr1.4:73969707-73969726 | None:intergenic | 25.0% |
| ! | CTTGATCAAACTTTCTTATT+TGG | - | chr1.4:73970005-73970024 | MS.gene34038:intron | 25.0% |
| ! | GCCAATTGTAGTAAATAAAT+AGG | + | chr1.4:73968745-73968764 | None:intergenic | 25.0% |
| ! | TATAAAAACTATTGTAGGAC+TGG | - | chr1.4:73971205-73971224 | MS.gene34038:intron | 25.0% |
| ! | TCTAATGGAAATGAATATTC+AGG | + | chr1.4:73969885-73969904 | None:intergenic | 25.0% |
| ! | TGCATTAAAGGACAAAATAA+GGG | + | chr1.4:73970701-73970720 | None:intergenic | 25.0% |
| ! | TTTCAAATCTATAAAGGTTC+CGG | - | chr1.4:73971399-73971418 | MS.gene34038:CDS | 25.0% |
| ! | TTTGATGTGTTTATAGGTTT+CGG | + | chr1.4:73968330-73968349 | None:intergenic | 25.0% |
| !! | AACATAGTTTACCATTTTGA+AGG | + | chr1.4:73971089-73971108 | None:intergenic | 25.0% |
| !! | ACATAGTTTACCATTTTGAA+GGG | + | chr1.4:73971088-73971107 | None:intergenic | 25.0% |
| !! | ATCTTTTTCTTATAATTGGG+AGG | + | chr1.4:73970639-73970658 | None:intergenic | 25.0% |
| !! | ATTTTGCGATAATTTTTTGC+GGG | + | chr1.4:73969062-73969081 | None:intergenic | 25.0% |
| !! | CTAATTTGTGATGTTAACTT+TGG | - | chr1.4:73969705-73969724 | MS.gene34038:CDS | 25.0% |
| !! | TATCGGTCCAATTTAAAATA+GGG | + | chr1.4:73969394-73969413 | None:intergenic | 25.0% |
| !! | TTTCAATTAGTGTTGTTCAA+GGG | - | chr1.4:73968685-73968704 | MS.gene34038:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr1.4:73969258-73969277 | MS.gene34038:intron | 25.0% |
| !!! | AATTTTGTTATTGGATGAAG+TGG | - | chr1.4:73968544-73968563 | MS.gene34038:intron | 25.0% |
| !!! | ACAAACTACTTTTTATCTAG+AGG | - | chr1.4:73970406-73970425 | MS.gene34038:intron | 25.0% |
| !!! | ATTGTTTTTTTCTTTGACCA+GGG | - | chr1.4:73970833-73970852 | MS.gene34038:intron | 25.0% |
| !!! | TAAAACTTGTTTCTGAATCT+GGG | - | chr1.4:73970163-73970182 | MS.gene34038:intron | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr1.4:73969257-73969276 | MS.gene34038:intron | 25.0% |
| !!! | TATATTTTCACTTTTGAACC+TGG | - | chr1.4:73969555-73969574 | MS.gene34038:intron | 25.0% |
| !!! | TTAAAACTTGTTTCTGAATC+TGG | - | chr1.4:73970162-73970181 | MS.gene34038:intron | 25.0% |
| !!! | TTTTCAATTAGTGTTGTTCA+AGG | - | chr1.4:73968684-73968703 | MS.gene34038:intron | 25.0% |
| AAAAAGTTACCTGATTGAGA+GGG | + | chr1.4:73968441-73968460 | None:intergenic | 30.0% | |
| AAAAATTGTTGAGACATGTC+TGG | + | chr1.4:73970500-73970519 | None:intergenic | 30.0% | |
| AAGGAGTGAAATGGATATAT+GGG | - | chr1.4:73969667-73969686 | MS.gene34038:CDS | 30.0% | |
| AAGTAGAGACTAAACTTACA+AGG | - | chr1.4:73969335-73969354 | MS.gene34038:intron | 30.0% | |
| AAGTAGGGACTAAACTTATA+AGG | + | chr1.4:73968890-73968909 | None:intergenic | 30.0% | |
| AATCAACTACTTTACCATCT+TGG | - | chr1.4:73968379-73968398 | MS.gene34038:CDS | 30.0% | |
| ACTAGTAACATGAGTAAACT+AGG | + | chr1.4:73971154-73971173 | None:intergenic | 30.0% | |
| ATCAACTACTTTACCATCTT+GGG | - | chr1.4:73968380-73968399 | MS.gene34038:CDS | 30.0% | |
| ATCCTCAACACAAAATCTAA+TGG | + | chr1.4:73969900-73969919 | None:intergenic | 30.0% | |
| ATGTAAGTTAAGGAGTGAAA+TGG | - | chr1.4:73969658-73969677 | MS.gene34038:CDS | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | + | chr1.4:73969195-73969214 | None:intergenic | 30.0% | |
| CAGTGCAGAAAAACAAAATT+AGG | + | chr1.4:73968935-73968954 | None:intergenic | 30.0% | |
| GAAAATTACACAGGAATGAA+AGG | + | chr1.4:73970355-73970374 | None:intergenic | 30.0% | |
| GAAAGGAATAGCTAAACAAT+TGG | - | chr1.4:73971273-73971292 | MS.gene34038:intron | 30.0% | |
| GAACTTAAAGTTATGGTGTT+TGG | - | chr1.4:73969731-73969750 | MS.gene34038:CDS | 30.0% | |
| GCAAGGTTTCAAATCTATAA+AGG | - | chr1.4:73971393-73971412 | MS.gene34038:CDS | 30.0% | |
| TAAGGAGTGAAATGGATATA+TGG | - | chr1.4:73969666-73969685 | MS.gene34038:CDS | 30.0% | |
| TCTAAATTAAATGCTCTTCG+AGG | + | chr1.4:73970755-73970774 | None:intergenic | 30.0% | |
| TCTAAGCTTGATTAATAGGA+AGG | - | chr1.4:73969444-73969463 | MS.gene34038:intron | 30.0% | |
| TTCAAATCTATAAAGGTTCC+GGG | - | chr1.4:73971400-73971419 | MS.gene34038:CDS | 30.0% | |
| TTGGTAGGAACTTAAAGTTA+TGG | - | chr1.4:73969724-73969743 | MS.gene34038:CDS | 30.0% | |
| TTTGTGATGTTAACTTTGGT+AGG | - | chr1.4:73969709-73969728 | MS.gene34038:CDS | 30.0% | |
| ! | ATTAGATTTTGTGTTGAGGA+TGG | - | chr1.4:73969899-73969918 | MS.gene34038:CDS | 30.0% |
| ! | CTATCGGTCCAATTTAAAAT+AGG | + | chr1.4:73969395-73969414 | None:intergenic | 30.0% |
| ! | TTCCATTAGATTTTGTGTTG+AGG | - | chr1.4:73969895-73969914 | MS.gene34038:CDS | 30.0% |
| !! | AACTTTTCTTCTGAGAATGT+GGG | - | chr1.4:73968639-73968658 | MS.gene34038:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr1.4:73969351-73969370 | MS.gene34038:intron | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr1.4:73969350-73969369 | MS.gene34038:intron | 30.0% |
| !! | TTCTGTTTTAAACAAGTGCA+AGG | + | chr1.4:73970966-73970985 | None:intergenic | 30.0% |
| !!! | GATTGTTTTTTTCTTTGACC+AGG | - | chr1.4:73970832-73970851 | MS.gene34038:intron | 30.0% |
| AAGTGAAGACTTCAAGATTG+CGG | - | chr1.4:73970028-73970047 | MS.gene34038:intron | 35.0% | |
| AAGTTATGGTGTTTGGATGT+AGG | - | chr1.4:73969738-73969757 | MS.gene34038:CDS | 35.0% | |
| AATTAAATGCTCTTCGAGGA+TGG | + | chr1.4:73970751-73970770 | None:intergenic | 35.0% | |
| ACAATTGGCAATGCTATTGT+TGG | - | chr1.4:73968756-73968775 | MS.gene34038:intron | 35.0% | |
| ACTAGTAGTTCCTGATAAGT+GGG | - | chr1.4:73968784-73968803 | MS.gene34038:intron | 35.0% | |
| AGGAATAGCTAAACAATTGG+TGG | - | chr1.4:73971276-73971295 | MS.gene34038:intron | 35.0% | |
| AGGAGTGAAATGGATATATG+GGG | - | chr1.4:73969668-73969687 | MS.gene34038:CDS | 35.0% | |
| ATAAGTGGGTAGGTTTAGTT+AGG | - | chr1.4:73968798-73968817 | MS.gene34038:intron | 35.0% | |
| ATGAAGTTGAACTTCACATC+TGG | + | chr1.4:73971457-73971476 | None:intergenic | 35.0% | |
| ATGTGATAAATGTTACTCCC+TGG | + | chr1.4:73970853-73970872 | None:intergenic | 35.0% | |
| CACTCCTTAACTTACATAGA+TGG | + | chr1.4:73969655-73969674 | None:intergenic | 35.0% | |
| CCAGTCTCATGTATAAGAAA+AGG | - | chr1.4:73970599-73970618 | MS.gene34038:intron | 35.0% | |
| CTAGCCATCTATGTAAGTTA+AGG | - | chr1.4:73969648-73969667 | MS.gene34038:CDS | 35.0% | |
| GAAAAAGTTACCTGATTGAG+AGG | + | chr1.4:73968442-73968461 | None:intergenic | 35.0% | |
| GAACAAATCAACAACTTGAC+TGG | + | chr1.4:73969775-73969794 | None:intergenic | 35.0% | |
| GGTAACACCTACTGTTTATA+TGG | + | chr1.4:73970730-73970749 | None:intergenic | 35.0% | |
| TAAATCGCAGTGTAATGCAA+TGG | + | chr1.4:73971341-73971360 | None:intergenic | 35.0% | |
| TAGCTATTAGAAGATCAACC+AGG | + | chr1.4:73969576-73969595 | None:intergenic | 35.0% | |
| TCTCTTCATATTGATCACTG+AGG | - | chr1.4:73970993-73971012 | MS.gene34038:intron | 35.0% | |
| TGATGCTTGATTGCGAAATT+TGG | + | chr1.4:73969511-73969530 | None:intergenic | 35.0% | |
| TTCTTATACATGAGACTGGA+GGG | + | chr1.4:73970598-73970617 | None:intergenic | 35.0% | |
| TTTCTTATACATGAGACTGG+AGG | + | chr1.4:73970599-73970618 | None:intergenic | 35.0% | |
| ! | CCTTTTCTTATACATGAGAC+TGG | + | chr1.4:73970602-73970621 | None:intergenic | 35.0% |
| ! | TTCACATCTGGAGAAGTTTT+TGG | + | chr1.4:73971445-73971464 | None:intergenic | 35.0% |
| ! | TTGTTGTTGTTGCTTACAAG+AGG | + | chr1.4:73968237-73968256 | None:intergenic | 35.0% |
| !! | ACTTTTCTTCTGAGAATGTG+GGG | - | chr1.4:73968640-73968659 | MS.gene34038:intron | 35.0% |
| !! | AGACAAGCTAGAAGCATTTA+AGG | + | chr1.4:73970554-73970573 | None:intergenic | 35.0% |
| !! | AGATGGGTTTGTTGAATTTG+TGG | - | chr1.4:73968510-73968529 | MS.gene34038:intron | 35.0% |
| !! | ATAGGGACTCGCTATTTTAT+AGG | + | chr1.4:73968857-73968876 | None:intergenic | 35.0% |
| !! | CAACTTTTCTTCTGAGAATG+TGG | - | chr1.4:73968638-73968657 | MS.gene34038:intron | 35.0% |
| !! | TAGGGACTCGCTATTTTATA+GGG | + | chr1.4:73968856-73968875 | None:intergenic | 35.0% |
| AAATCTATAAAGGTTCCGGG+AGG | - | chr1.4:73971403-73971422 | MS.gene34038:CDS | 40.0% | |
| AATAGAGGATTGTTGGGAAG+TGG | - | chr1.4:73969833-73969852 | MS.gene34038:CDS | 40.0% | |
| ACAAAGTTATACCAAGGGCA+AGG | - | chr1.4:73971376-73971395 | MS.gene34038:CDS | 40.0% | |
| ACTAAACCTACCCACTTATC+AGG | + | chr1.4:73968797-73968816 | None:intergenic | 40.0% | |
| AGAATCACAAGCCAGAAGTT+GGG | - | chr1.4:73971306-73971325 | MS.gene34038:CDS | 40.0% | |
| AGGCAAGAATAGAGGATTGT+TGG | - | chr1.4:73969826-73969845 | MS.gene34038:CDS | 40.0% | |
| AGTGAAGACTTCAAGATTGC+GGG | - | chr1.4:73970029-73970048 | MS.gene34038:intron | 40.0% | |
| ATTGATCACTGAGGCAAGAA+TGG | - | chr1.4:73971002-73971021 | MS.gene34038:intron | 40.0% | |
| CAGACTTTCTACCTAGAAAG+GGG | - | chr1.4:73970117-73970136 | MS.gene34038:intron | 40.0% | |
| CGGCAACAAAGTTATACCAA+GGG | - | chr1.4:73971371-73971390 | MS.gene34038:CDS | 40.0% | |
| GACTAGTAGTTCCTGATAAG+TGG | - | chr1.4:73968783-73968802 | MS.gene34038:intron | 40.0% | |
| GCAGACTTTCTACCTAGAAA+GGG | - | chr1.4:73970116-73970135 | MS.gene34038:intron | 40.0% | |
| GCAGGATTCTCTTTACCAAA+TGG | - | chr1.4:73969942-73969961 | MS.gene34038:CDS | 40.0% | |
| GGCAAGAATAGAGGATTGTT+GGG | - | chr1.4:73969827-73969846 | MS.gene34038:CDS | 40.0% | |
| GGGAAATTAAGCCTCAACAA+GGG | - | chr1.4:73970059-73970078 | MS.gene34038:intron | 40.0% | |
| TATAGGTTTCGGAGATACTG+AGG | + | chr1.4:73968319-73968338 | None:intergenic | 40.0% | |
| TCCTGCATTACCCTTCAAAA+TGG | - | chr1.4:73971075-73971094 | MS.gene34038:intron | 40.0% | |
| TGACATGCGATGAAAGAACA+TGG | + | chr1.4:73970918-73970937 | None:intergenic | 40.0% | |
| TGCAGACTTTCTACCTAGAA+AGG | - | chr1.4:73970115-73970134 | MS.gene34038:intron | 40.0% | |
| TGGGAAATTAAGCCTCAACA+AGG | - | chr1.4:73970058-73970077 | MS.gene34038:intron | 40.0% | |
| TGTGTTGAGGATGGATAGAT+TGG | - | chr1.4:73969908-73969927 | MS.gene34038:CDS | 40.0% | |
| TGTTAGAGAGGCAAGAATAG+AGG | - | chr1.4:73969818-73969837 | MS.gene34038:CDS | 40.0% | |
| TTTCTTACTCCCTCTCAATC+AGG | - | chr1.4:73968429-73968448 | MS.gene34038:CDS | 40.0% | |
| ! | AGCTAAACAATTGGTGGCTA+AGG | - | chr1.4:73971282-73971301 | MS.gene34038:intron | 40.0% |
| ! | CAATTAGTGTTGTTCAAGGG+AGG | - | chr1.4:73968688-73968707 | MS.gene34038:intron | 40.0% |
| ! | CAGGTTCTTTTGCAACCATT+TGG | + | chr1.4:73969960-73969979 | None:intergenic | 40.0% |
| ! | TAGATTTGAAACCTTGCCCT+TGG | + | chr1.4:73971390-73971409 | None:intergenic | 40.0% |
| !! | ACCATTTTGAAGGGTAATGC+AGG | + | chr1.4:73971079-73971098 | None:intergenic | 40.0% |
| !! | CTGAGGCAAGAATGGATTTT+AGG | - | chr1.4:73971010-73971029 | MS.gene34038:intron | 40.0% |
| !! | TCAAGATTGCGGGTTTTGAT+GGG | - | chr1.4:73970039-73970058 | MS.gene34038:intron | 40.0% |
| !! | TTCAAGATTGCGGGTTTTGA+TGG | - | chr1.4:73970038-73970057 | MS.gene34038:intron | 40.0% |
| !!! | TCTGGAGAAGTTTTTGGTTG+AGG | + | chr1.4:73971439-73971458 | None:intergenic | 40.0% |
| AAGCCTCAACAAGGGATATG+TGG | - | chr1.4:73970067-73970086 | MS.gene34038:intron | 45.0% | |
| ACACAGGAATGAAAGGCAAG+CGG | + | chr1.4:73970348-73970367 | None:intergenic | 45.0% | |
| ATGGCTAGCGTAAAATCGAG+AGG | + | chr1.4:73969636-73969655 | None:intergenic | 45.0% | |
| CAGAATCACAAGCCAGAAGT+TGG | - | chr1.4:73971305-73971324 | MS.gene34038:CDS | 45.0% | |
| CCTCTCTAACAGTGATCTCA+GGG | + | chr1.4:73969809-73969828 | None:intergenic | 45.0% | |
| CGCATGTCAATAGTTCTTCG+TGG | - | chr1.4:73970929-73970948 | MS.gene34038:intron | 45.0% | |
| CTCTCTAACAGTGATCTCAG+GGG | + | chr1.4:73969808-73969827 | None:intergenic | 45.0% | |
| CTGCGATTTACGAAATCCTG+CGG | - | chr1.4:73971351-73971370 | MS.gene34038:CDS | 45.0% | |
| GAAATGCGGTCAATACCACT+TGG | - | chr1.4:73968291-73968310 | MS.gene34038:CDS | 45.0% | |
| GAAATGGATATATGGGGTGC+TGG | - | chr1.4:73969674-73969693 | MS.gene34038:CDS | 45.0% | |
| GAATCACAAGCCAGAAGTTG+GGG | - | chr1.4:73971307-73971326 | MS.gene34038:CDS | 45.0% | |
| GCGGCAACAAAGTTATACCA+AGG | - | chr1.4:73971370-73971389 | MS.gene34038:CDS | 45.0% | |
| GTAGTTCCTGATAAGTGGGT+AGG | - | chr1.4:73968788-73968807 | MS.gene34038:intron | 45.0% | |
| GTTGAGGATGGATAGATTGG+TGG | - | chr1.4:73969911-73969930 | MS.gene34038:CDS | 45.0% | |
| TATTGACCGCATTTCGTGGA+GGG | + | chr1.4:73968286-73968305 | None:intergenic | 45.0% | |
| TGAATCTGGGTTTGTGAGTG+AGG | - | chr1.4:73970176-73970195 | MS.gene34038:intron | 45.0% | |
| TGGCTAGCGTAAAATCGAGA+GGG | + | chr1.4:73969635-73969654 | None:intergenic | 45.0% | |
| TGGTATAACTTTGTTGCCGC+AGG | + | chr1.4:73971370-73971389 | None:intergenic | 45.0% | |
| TGGTTGCAAAAGAACCTGTC+TGG | - | chr1.4:73969962-73969981 | MS.gene34038:CDS | 45.0% | |
| ! | ACCTGTCTGGTTGCTGTTAT+TGG | - | chr1.4:73969975-73969994 | MS.gene34038:intron | 45.0% |
| ! | AGATTGGTGGCTATGTTAGC+AGG | - | chr1.4:73969924-73969943 | MS.gene34038:CDS | 45.0% |
| ! | GATGATGGTGAAACCCAAGA+TGG | + | chr1.4:73968396-73968415 | None:intergenic | 45.0% |
| ! | TAGTGTTGTTCAAGGGAGGT+AGG | - | chr1.4:73968692-73968711 | MS.gene34038:intron | 45.0% |
| !!! | ATAAGTAATTTTTTTTTTAT+AGG | - | chr1.4:73969290-73969309 | MS.gene34038:intron | 5.0% |
| !!! | TAAGTAATTTTTTTTTTATA+GGG | - | chr1.4:73969291-73969310 | MS.gene34038:intron | 5.0% |
| AGACAACCCTCCACGAAATG+CGG | - | chr1.4:73968277-73968296 | MS.gene34038:CDS | 50.0% | |
| CAGCCACATATCCCTTGTTG+AGG | + | chr1.4:73970073-73970092 | None:intergenic | 50.0% | |
| CCCTGAGATCACTGTTAGAG+AGG | - | chr1.4:73969806-73969825 | MS.gene34038:CDS | 50.0% | |
| CTCAACAAGGGATATGTGGC+TGG | - | chr1.4:73970071-73970090 | MS.gene34038:intron | 50.0% | |
| GCCAATAACAGCAACCAGAC+AGG | + | chr1.4:73969979-73969998 | None:intergenic | 50.0% | |
| GCCTCTCTAACAGTGATCTC+AGG | + | chr1.4:73969810-73969829 | None:intergenic | 50.0% | |
| GGAGATACTGAGGTTCCAAG+TGG | + | chr1.4:73968309-73968328 | None:intergenic | 50.0% | |
| GGCTAGCGTAAAATCGAGAG+GGG | + | chr1.4:73969634-73969653 | None:intergenic | 50.0% | |
| GTCTGAATTCGCTCGTCTTC+CGG | - | chr1.4:73970471-73970490 | MS.gene34038:intron | 50.0% | |
| GTTGAGACATGTCTGGACTC+CGG | + | chr1.4:73970493-73970512 | None:intergenic | 50.0% | |
| ! | ATGAGACTGGAGGGAGTATG+TGG | + | chr1.4:73970589-73970608 | None:intergenic | 50.0% |
| ! | GTATTGACCGCATTTCGTGG+AGG | + | chr1.4:73968287-73968306 | None:intergenic | 50.0% |
| !! | GTGGTATTGACCGCATTTCG+TGG | + | chr1.4:73968290-73968309 | None:intergenic | 50.0% |
| ACTCACCTTCTCTGTCGCAG+AGG | + | chr1.4:73970143-73970162 | None:intergenic | 55.0% | |
| AGGTTCCGGGAGGAGCTAAC+TGG | - | chr1.4:73971413-73971432 | MS.gene34038:CDS | 60.0% | |
| CTACCGCTCTGACTGCAGTG+CGG | + | chr1.4:73969478-73969497 | None:intergenic | 60.0% | |
| GGCACGACATCCCCAACTTC+TGG | + | chr1.4:73971320-73971339 | None:intergenic | 60.0% | |
| TGAGGCCAGTTAGCTCCTCC+CGG | + | chr1.4:73971421-73971440 | None:intergenic | 60.0% | |
| TGTCGCAGAGGCCCCTTTCT+AGG | + | chr1.4:73970131-73970150 | None:intergenic | 60.0% | |
| AGGGGCCTCTGCGACAGAGA+AGG | - | chr1.4:73970135-73970154 | MS.gene34038:intron | 65.0% | |
| CAGCCGCACTGCAGTCAGAG+CGG | - | chr1.4:73969472-73969491 | MS.gene34038:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 73968231 | 73971510 | 73968231 | ID=MS.gene34038 |
| chr1.4 | mRNA | 73968231 | 73971510 | 73968231 | ID=MS.gene34038.t1;Parent=MS.gene34038 |
| chr1.4 | exon | 73971291 | 73971510 | 73971291 | ID=MS.gene34038.t1.exon1;Parent=MS.gene34038.t1 |
| chr1.4 | CDS | 73971291 | 73971510 | 73971291 | ID=cds.MS.gene34038.t1;Parent=MS.gene34038.t1 |
| chr1.4 | exon | 73969585 | 73969981 | 73969585 | ID=MS.gene34038.t1.exon2;Parent=MS.gene34038.t1 |
| chr1.4 | CDS | 73969585 | 73969981 | 73969585 | ID=cds.MS.gene34038.t1;Parent=MS.gene34038.t1 |
| chr1.4 | exon | 73968231 | 73968519 | 73968231 | ID=MS.gene34038.t1.exon3;Parent=MS.gene34038.t1 |
| chr1.4 | CDS | 73968231 | 73968519 | 73968231 | ID=cds.MS.gene34038.t1;Parent=MS.gene34038.t1 |
| Gene Sequence |
| Protein sequence |
