Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72720.t1 | XP_003612461.2 | 95.5 | 582 | 24 | 2 | 1 | 581 | 1 | 581 | 3.80E-306 | 1060.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72720.t1 | O49675 | 72.5 | 517 | 131 | 5 | 72 | 578 | 80 | 595 | 4.3e-226 | 785.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72720.t1 | G7K3Y7 | 95.5 | 582 | 24 | 2 | 1 | 581 | 1 | 581 | 2.7e-306 | 1060.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene72720 | 0.853502 | 2.29E-61 | -1.69E-46 |
| MS.gene049171 | MS.gene72720 | 0.894065 | 3.50E-75 | -1.69E-46 |
| MS.gene049173 | MS.gene72720 | 0.817113 | 3.90E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene72720 | 0.836166 | 1.10E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene72720 | 0.888326 | 6.52E-73 | -1.69E-46 |
| MS.gene049232 | MS.gene72720 | 0.833933 | 4.01E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene72720 | 0.878887 | 1.95E-69 | -1.69E-46 |
| MS.gene049320 | MS.gene72720 | 0.888179 | 7.42E-73 | -1.69E-46 |
| MS.gene04939 | MS.gene72720 | 0.810547 | 1.09E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene72720 | 0.883463 | 4.39E-71 | -1.69E-46 |
| MS.gene049627 | MS.gene72720 | 0.823163 | 1.61E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene72720 | 0.840104 | 1.06E-57 | -1.69E-46 |
| MS.gene049657 | MS.gene72720 | 0.804012 | 2.65E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene72720 | 0.839995 | 1.14E-57 | -1.69E-46 |
| MS.gene05010 | MS.gene72720 | 0.866499 | 2.73E-65 | -1.69E-46 |
| MS.gene050163 | MS.gene72720 | 0.846131 | 2.63E-59 | -1.69E-46 |
| MS.gene050165 | MS.gene72720 | 0.824497 | 7.82E-54 | -1.69E-46 |
| MS.gene050170 | MS.gene72720 | 0.878018 | 3.94E-69 | -1.69E-46 |
| MS.gene050323 | MS.gene72720 | 0.836392 | 9.61E-57 | -1.69E-46 |
| MS.gene050333 | MS.gene72720 | 0.824898 | 6.29E-54 | -1.69E-46 |
| MS.gene050381 | MS.gene72720 | -0.815601 | 8.51E-52 | -1.69E-46 |
| MS.gene050479 | MS.gene72720 | -0.802937 | 4.43E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene72720 | 0.847919 | 8.53E-60 | -1.69E-46 |
| MS.gene050502 | MS.gene72720 | 0.816781 | 4.63E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene72720 | 0.887997 | 8.72E-73 | -1.69E-46 |
| MS.gene050518 | MS.gene72720 | 0.857588 | 1.47E-62 | -1.69E-46 |
| MS.gene050538 | MS.gene72720 | 0.826157 | 3.17E-54 | -1.69E-46 |
| MS.gene050547 | MS.gene72720 | -0.816701 | 4.83E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene72720 | 0.916329 | 2.03E-85 | -1.69E-46 |
| MS.gene050593 | MS.gene72720 | 0.823345 | 1.46E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene72720 | 0.871122 | 8.69E-67 | -1.69E-46 |
| MS.gene050675 | MS.gene72720 | 0.850358 | 1.79E-60 | -1.69E-46 |
| MS.gene050699 | MS.gene72720 | 0.909043 | 8.80E-82 | -1.69E-46 |
| MS.gene050747 | MS.gene72720 | 0.897958 | 8.48E-77 | -1.69E-46 |
| MS.gene050772 | MS.gene72720 | 0.885345 | 8.81E-72 | -1.69E-46 |
| MS.gene05080 | MS.gene72720 | 0.846747 | 1.79E-59 | -1.69E-46 |
| MS.gene05081 | MS.gene72720 | 0.821418 | 4.08E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene72720 | 0.845533 | 3.83E-59 | -1.69E-46 |
| MS.gene050871 | MS.gene72720 | 0.844252 | 8.48E-59 | -1.69E-46 |
| MS.gene050883 | MS.gene72720 | -0.821427 | 4.06E-53 | -1.69E-46 |
| MS.gene050904 | MS.gene72720 | 0.830322 | 3.13E-55 | -1.69E-46 |
| MS.gene050950 | MS.gene72720 | 0.880617 | 4.73E-70 | -1.69E-46 |
| MS.gene050986 | MS.gene72720 | 0.884412 | 1.96E-71 | -1.69E-46 |
| MS.gene05100 | MS.gene72720 | 0.857369 | 1.71E-62 | -1.69E-46 |
| MS.gene051167 | MS.gene72720 | -0.821758 | 3.41E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene72720 | 0.827846 | 1.25E-54 | -1.69E-46 |
| MS.gene051336 | MS.gene72720 | 0.840928 | 6.47E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene72720 | 0.809458 | 1.87E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene72720 | 0.87335 | 1.57E-67 | -1.69E-46 |
| MS.gene051666 | MS.gene72720 | 0.823253 | 1.53E-53 | -1.69E-46 |
| MS.gene051694 | MS.gene72720 | 0.829875 | 4.03E-55 | -1.69E-46 |
| MS.gene051810 | MS.gene72720 | 0.805649 | 1.21E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene72720 | 0.858657 | 7.09E-63 | -1.69E-46 |
| MS.gene051858 | MS.gene72720 | 0.818589 | 1.81E-52 | -1.69E-46 |
| MS.gene051941 | MS.gene72720 | 0.824234 | 9.02E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene72720 | 0.899345 | 2.17E-77 | -1.69E-46 |
| MS.gene052318 | MS.gene72720 | 0.805953 | 1.04E-49 | -1.69E-46 |
| MS.gene052346 | MS.gene72720 | 0.824327 | 8.57E-54 | -1.69E-46 |
| MS.gene052421 | MS.gene72720 | 0.81699 | 4.16E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene72720 | 0.882121 | 1.36E-70 | -1.69E-46 |
| MS.gene052486 | MS.gene72720 | 0.885108 | 1.08E-71 | -1.69E-46 |
| MS.gene052501 | MS.gene72720 | 0.875179 | 3.78E-68 | -1.69E-46 |
| MS.gene052503 | MS.gene72720 | 0.920539 | 1.13E-87 | -1.69E-46 |
| MS.gene052504 | MS.gene72720 | 0.807857 | 4.12E-50 | -1.69E-46 |
| MS.gene052505 | MS.gene72720 | 0.858754 | 6.63E-63 | -1.69E-46 |
| MS.gene052506 | MS.gene72720 | 0.854155 | 1.49E-61 | -1.69E-46 |
| MS.gene052615 | MS.gene72720 | 0.877678 | 5.18E-69 | -1.69E-46 |
| MS.gene052820 | MS.gene72720 | 0.807029 | 6.17E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene72720 | 0.846717 | 1.82E-59 | -1.69E-46 |
| MS.gene052823 | MS.gene72720 | 0.921471 | 3.43E-88 | -1.69E-46 |
| MS.gene052825 | MS.gene72720 | 0.914033 | 3.08E-84 | -1.69E-46 |
| MS.gene052966 | MS.gene72720 | 0.834976 | 2.19E-56 | -1.69E-46 |
| MS.gene052982 | MS.gene72720 | 0.841234 | 5.38E-58 | -1.69E-46 |
| MS.gene053117 | MS.gene72720 | 0.811908 | 5.53E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene72720 | 0.88691 | 2.27E-72 | -1.69E-46 |
| MS.gene053207 | MS.gene72720 | 0.85611 | 4.02E-62 | -1.69E-46 |
| MS.gene053213 | MS.gene72720 | 0.899381 | 2.10E-77 | -1.69E-46 |
| MS.gene053286 | MS.gene72720 | 0.897095 | 1.96E-76 | -1.69E-46 |
| MS.gene053420 | MS.gene72720 | -0.801479 | 8.83E-49 | -1.69E-46 |
| MS.gene053421 | MS.gene72720 | -0.804771 | 1.84E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene72720 | 0.950542 | 1.33E-108 | -1.69E-46 |
| MS.gene053479 | MS.gene72720 | 0.819468 | 1.14E-52 | -1.69E-46 |
| MS.gene053480 | MS.gene72720 | 0.878024 | 3.92E-69 | -1.69E-46 |
| MS.gene053549 | MS.gene72720 | -0.824197 | 9.20E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene72720 | 0.88852 | 5.49E-73 | -1.69E-46 |
| MS.gene053579 | MS.gene72720 | 0.811326 | 7.40E-51 | -1.69E-46 |
| MS.gene053626 | MS.gene72720 | 0.865898 | 4.23E-65 | -1.69E-46 |
| MS.gene053632 | MS.gene72720 | 0.886075 | 4.69E-72 | -1.69E-46 |
| MS.gene053824 | MS.gene72720 | 0.851994 | 6.18E-61 | -1.69E-46 |
| MS.gene053916 | MS.gene72720 | 0.828015 | 1.14E-54 | -1.69E-46 |
| MS.gene053997 | MS.gene72720 | 0.803473 | 3.43E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene72720 | 0.812951 | 3.27E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene72720 | 0.869178 | 3.76E-66 | -1.69E-46 |
| MS.gene054595 | MS.gene72720 | 0.882049 | 1.44E-70 | -1.69E-46 |
| MS.gene054600 | MS.gene72720 | 0.879493 | 1.19E-69 | -1.69E-46 |
| MS.gene054642 | MS.gene72720 | 0.864152 | 1.49E-64 | -1.69E-46 |
| MS.gene054706 | MS.gene72720 | -0.8191 | 1.39E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene72720 | 0.891539 | 3.62E-74 | -1.69E-46 |
| MS.gene054927 | MS.gene72720 | 0.887201 | 1.76E-72 | -1.69E-46 |
| MS.gene054954 | MS.gene72720 | 0.877671 | 5.21E-69 | -1.69E-46 |
| MS.gene05505 | MS.gene72720 | 0.823433 | 1.39E-53 | -1.69E-46 |
| MS.gene055154 | MS.gene72720 | -0.822709 | 2.05E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene72720 | 0.850222 | 1.95E-60 | -1.69E-46 |
| MS.gene055224 | MS.gene72720 | 0.8029 | 4.50E-49 | -1.69E-46 |
| MS.gene055289 | MS.gene72720 | 0.85444 | 1.23E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene72720 | 0.911533 | 5.46E-83 | -1.69E-46 |
| MS.gene055502 | MS.gene72720 | 0.885001 | 1.18E-71 | -1.69E-46 |
| MS.gene055577 | MS.gene72720 | 0.866316 | 3.12E-65 | -1.69E-46 |
| MS.gene055629 | MS.gene72720 | 0.831761 | 1.39E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene72720 | 0.844525 | 7.16E-59 | -1.69E-46 |
| MS.gene055748 | MS.gene72720 | 0.8517 | 7.48E-61 | -1.69E-46 |
| MS.gene055750 | MS.gene72720 | 0.856602 | 2.88E-62 | -1.69E-46 |
| MS.gene055751 | MS.gene72720 | 0.840859 | 6.75E-58 | -1.69E-46 |
| MS.gene055776 | MS.gene72720 | 0.826846 | 2.17E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene72720 | 0.888802 | 4.27E-73 | -1.69E-46 |
| MS.gene055941 | MS.gene72720 | 0.835343 | 1.77E-56 | -1.69E-46 |
| MS.gene056040 | MS.gene72720 | 0.878923 | 1.89E-69 | -1.69E-46 |
| MS.gene056046 | MS.gene72720 | 0.805976 | 1.03E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene72720 | 0.825743 | 3.97E-54 | -1.69E-46 |
| MS.gene056166 | MS.gene72720 | 0.847183 | 1.36E-59 | -1.69E-46 |
| MS.gene056374 | MS.gene72720 | 0.856335 | 3.45E-62 | -1.69E-46 |
| MS.gene056409 | MS.gene72720 | 0.845348 | 4.30E-59 | -1.69E-46 |
| MS.gene056446 | MS.gene72720 | 0.86312 | 3.12E-64 | -1.69E-46 |
| MS.gene056449 | MS.gene72720 | 0.812542 | 4.02E-51 | -1.69E-46 |
| MS.gene056450 | MS.gene72720 | 0.826062 | 3.33E-54 | -1.69E-46 |
| MS.gene056487 | MS.gene72720 | 0.801264 | 9.77E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene72720 | 0.904221 | 1.54E-79 | -1.69E-46 |
| MS.gene056510 | MS.gene72720 | 0.866874 | 2.07E-65 | -1.69E-46 |
| MS.gene056550 | MS.gene72720 | -0.813784 | 2.15E-51 | -1.69E-46 |
| MS.gene056610 | MS.gene72720 | 0.862966 | 3.48E-64 | -1.69E-46 |
| MS.gene056657 | MS.gene72720 | 0.887222 | 1.73E-72 | -1.69E-46 |
| MS.gene056692 | MS.gene72720 | 0.847261 | 1.29E-59 | -1.69E-46 |
| MS.gene056877 | MS.gene72720 | 0.800422 | 1.45E-48 | -1.69E-46 |
| MS.gene056878 | MS.gene72720 | 0.850559 | 1.57E-60 | -1.69E-46 |
| MS.gene056946 | MS.gene72720 | 0.80103 | 1.09E-48 | -1.69E-46 |
| MS.gene057048 | MS.gene72720 | 0.840073 | 1.08E-57 | -1.69E-46 |
| MS.gene057076 | MS.gene72720 | 0.823786 | 1.15E-53 | -1.69E-46 |
| MS.gene057086 | MS.gene72720 | 0.813265 | 2.79E-51 | -1.69E-46 |
| MS.gene057196 | MS.gene72720 | 0.817676 | 2.91E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene72720 | 0.810226 | 1.28E-50 | -1.69E-46 |
| MS.gene057332 | MS.gene72720 | 0.810149 | 1.33E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene72720 | 0.86969 | 2.56E-66 | -1.69E-46 |
| MS.gene057658 | MS.gene72720 | 0.865112 | 7.48E-65 | -1.69E-46 |
| MS.gene057734 | MS.gene72720 | 0.814859 | 1.24E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene72720 | 0.875244 | 3.59E-68 | -1.69E-46 |
| MS.gene057856 | MS.gene72720 | 0.807855 | 4.12E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene72720 | 0.848694 | 5.21E-60 | -1.69E-46 |
| MS.gene058019 | MS.gene72720 | 0.843374 | 1.46E-58 | -1.69E-46 |
| MS.gene058130 | MS.gene72720 | 0.822762 | 1.99E-53 | -1.69E-46 |
| MS.gene058157 | MS.gene72720 | 0.820912 | 5.34E-53 | -1.69E-46 |
| MS.gene058334 | MS.gene72720 | -0.8225 | 2.29E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene72720 | 0.855521 | 5.97E-62 | -1.69E-46 |
| MS.gene05837 | MS.gene72720 | 0.873241 | 1.71E-67 | -1.69E-46 |
| MS.gene058419 | MS.gene72720 | 0.901491 | 2.54E-78 | -1.69E-46 |
| MS.gene058544 | MS.gene72720 | 0.905449 | 4.24E-80 | -1.69E-46 |
| MS.gene058723 | MS.gene72720 | 0.821015 | 5.05E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene72720 | 0.849604 | 2.91E-60 | -1.69E-46 |
| MS.gene058838 | MS.gene72720 | 0.885688 | 6.55E-72 | -1.69E-46 |
| MS.gene05883 | MS.gene72720 | 0.840297 | 9.46E-58 | -1.69E-46 |
| MS.gene059022 | MS.gene72720 | 0.888509 | 5.54E-73 | -1.69E-46 |
| MS.gene059023 | MS.gene72720 | 0.891199 | 4.94E-74 | -1.69E-46 |
| MS.gene059103 | MS.gene72720 | -0.824433 | 8.09E-54 | -1.69E-46 |
| MS.gene05914 | MS.gene72720 | 0.822886 | 1.86E-53 | -1.69E-46 |
| MS.gene059303 | MS.gene72720 | 0.842143 | 3.09E-58 | -1.69E-46 |
| MS.gene05934 | MS.gene72720 | 0.818431 | 1.97E-52 | -1.69E-46 |
| MS.gene059367 | MS.gene72720 | 0.834949 | 2.23E-56 | -1.69E-46 |
| MS.gene059455 | MS.gene72720 | 0.801056 | 1.08E-48 | -1.69E-46 |
| MS.gene059480 | MS.gene72720 | -0.824434 | 8.09E-54 | -1.69E-46 |
| MS.gene059667 | MS.gene72720 | 0.857856 | 1.23E-62 | -1.69E-46 |
| MS.gene059677 | MS.gene72720 | 0.885004 | 1.18E-71 | -1.69E-46 |
| MS.gene059718 | MS.gene72720 | 0.891866 | 2.68E-74 | -1.69E-46 |
| MS.gene059756 | MS.gene72720 | 0.88261 | 9.01E-71 | -1.69E-46 |
| MS.gene059801 | MS.gene72720 | 0.842725 | 2.17E-58 | -1.69E-46 |
| MS.gene059837 | MS.gene72720 | 0.838034 | 3.65E-57 | -1.69E-46 |
| MS.gene059865 | MS.gene72720 | 0.85781 | 1.27E-62 | -1.69E-46 |
| MS.gene059902 | MS.gene72720 | 0.815988 | 6.97E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene72720 | 0.849323 | 3.48E-60 | -1.69E-46 |
| MS.gene060482 | MS.gene72720 | 0.83331 | 5.74E-56 | -1.69E-46 |
| MS.gene060485 | MS.gene72720 | 0.823047 | 1.71E-53 | -1.69E-46 |
| MS.gene060595 | MS.gene72720 | -0.813355 | 2.67E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene72720 | 0.824534 | 7.66E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene72720 | 0.862407 | 5.18E-64 | -1.69E-46 |
| MS.gene060778 | MS.gene72720 | 0.872776 | 2.45E-67 | -1.69E-46 |
| MS.gene06077 | MS.gene72720 | 0.920722 | 8.92E-88 | -1.69E-46 |
| MS.gene060835 | MS.gene72720 | 0.849187 | 3.80E-60 | -1.69E-46 |
| MS.gene06092 | MS.gene72720 | 0.870716 | 1.18E-66 | -1.69E-46 |
| MS.gene06097 | MS.gene72720 | 0.818779 | 1.64E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene72720 | 0.873168 | 1.81E-67 | -1.69E-46 |
| MS.gene061150 | MS.gene72720 | 0.869545 | 2.86E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72720.t1 | MTR_5g025270 | 96.907 | 582 | 16 | 2 | 1 | 581 | 1 | 581 | 0.0 | 1155 |
| MS.gene72720.t1 | MTR_5g025230 | 82.646 | 582 | 96 | 4 | 1 | 581 | 1 | 578 | 0.0 | 986 |
| MS.gene72720.t1 | MTR_5g025250 | 81.787 | 582 | 102 | 3 | 1 | 581 | 1 | 579 | 0.0 | 978 |
| MS.gene72720.t1 | MTR_2g070460 | 36.473 | 584 | 334 | 15 | 24 | 577 | 32 | 608 | 2.91e-123 | 376 |
| MS.gene72720.t1 | MTR_8g037315 | 38.447 | 515 | 292 | 8 | 83 | 577 | 27 | 536 | 1.60e-112 | 346 |
| MS.gene72720.t1 | MTR_8g037275 | 37.149 | 498 | 284 | 9 | 101 | 577 | 82 | 571 | 4.16e-105 | 328 |
| MS.gene72720.t1 | MTR_8g037290 | 36.948 | 498 | 285 | 9 | 101 | 577 | 82 | 571 | 9.42e-104 | 325 |
| MS.gene72720.t1 | MTR_8g037310 | 36.047 | 516 | 301 | 10 | 83 | 577 | 64 | 571 | 9.25e-103 | 322 |
| MS.gene72720.t1 | MTR_3g110195 | 28.596 | 570 | 330 | 20 | 49 | 570 | 38 | 578 | 4.05e-56 | 199 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72720.t1 | AT4G19170 | 68.393 | 560 | 149 | 6 | 29 | 578 | 54 | 595 | 0.0 | 795 |
| MS.gene72720.t1 | AT3G63520 | 39.692 | 519 | 283 | 8 | 83 | 580 | 28 | 537 | 8.70e-122 | 370 |
| MS.gene72720.t1 | AT1G30100 | 40.408 | 490 | 280 | 9 | 92 | 575 | 102 | 585 | 8.28e-120 | 367 |
| MS.gene72720.t1 | AT3G14440 | 40.121 | 496 | 282 | 10 | 92 | 580 | 112 | 599 | 1.28e-117 | 361 |
| MS.gene72720.t1 | AT4G18350 | 36.332 | 567 | 327 | 10 | 29 | 576 | 29 | 580 | 8.59e-117 | 359 |
| MS.gene72720.t1 | AT1G78390 | 38.462 | 494 | 284 | 11 | 96 | 581 | 176 | 657 | 1.69e-112 | 350 |
| MS.gene72720.t1 | AT3G24220 | 34.828 | 580 | 336 | 14 | 33 | 577 | 2 | 574 | 4.55e-103 | 323 |
| MS.gene72720.t1 | AT2G44990 | 25.044 | 567 | 300 | 28 | 112 | 572 | 75 | 622 | 5.97e-12 | 68.9 |
| MS.gene72720.t1 | AT2G44990 | 25.044 | 567 | 300 | 28 | 112 | 572 | 71 | 618 | 7.58e-12 | 68.6 |
Find 141 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCCTCTTGACATGATTTC+TGG | 0.188747 | 5.4:+16429324 | MS.gene72720:CDS |
| GTTATGGGTGGTGGTGGTGG+TGG | 0.196963 | 5.4:-16428452 | None:intergenic |
| ATTTGCATCAAAACGGAAAT+AGG | 0.215073 | 5.4:-16429190 | None:intergenic |
| CTTGTTATTATGATGGGTTT+TGG | 0.244030 | 5.4:-16428292 | None:intergenic |
| AATCCAATGCCGAAGATTTC+AGG | 0.254183 | 5.4:+16429711 | MS.gene72720:CDS |
| ACACAATGTGAAATCATTAA+AGG | 0.269615 | 5.4:+16428634 | MS.gene72720:CDS |
| TTTGATGGATGAGATGTTAA+AGG | 0.272209 | 5.4:-16428344 | None:intergenic |
| CAGCACGAAACCTGGATTTC+GGG | 0.277585 | 5.4:+16429631 | MS.gene72720:CDS |
| GGTCTGGGATTGTGATGTTT+GGG | 0.281478 | 5.4:-16428380 | None:intergenic |
| GTGAAGATAAATATTAAAAC+AGG | 0.290009 | 5.4:+16429585 | MS.gene72720:CDS |
| CTGGATTTCGGGGTGATAAA+TGG | 0.290879 | 5.4:+16429642 | MS.gene72720:CDS |
| GGTGATAAATGGTGATTATA+TGG | 0.293631 | 5.4:+16429653 | MS.gene72720:CDS |
| TCAGCACGAAACCTGGATTT+CGG | 0.304408 | 5.4:+16429630 | MS.gene72720:CDS |
| AATCTTGACGGCCGATTGTT+TGG | 0.307017 | 5.4:-16429065 | None:intergenic |
| GGGTCTGGGATTGTGATGTT+TGG | 0.319551 | 5.4:-16428381 | None:intergenic |
| TCCAGGTTTCGTGCTGATAA+TGG | 0.334748 | 5.4:-16429624 | None:intergenic |
| ACCGCGGCACGTGTCATATC+TGG | 0.338162 | 5.4:+16428916 | MS.gene72720:CDS |
| GAGGTTATGGGTGGTGGTGG+TGG | 0.353426 | 5.4:-16428455 | None:intergenic |
| AACACAAGTTTGGCTTTGTT+TGG | 0.358095 | 5.4:+16428973 | MS.gene72720:CDS |
| TTGCTTACTTGTTATTATGA+TGG | 0.362595 | 5.4:-16428299 | None:intergenic |
| AGGTTTGTTTATGCGGCAAT+TGG | 0.386277 | 5.4:+16429687 | MS.gene72720:CDS |
| GTGATAAATGGTGATTATAT+GGG | 0.388122 | 5.4:+16429654 | MS.gene72720:CDS |
| TTTGAGGTTATGGGTGGTGG+TGG | 0.388850 | 5.4:-16428458 | None:intergenic |
| TGGTTTAGCCAACACAAGTT+TGG | 0.393154 | 5.4:+16428963 | MS.gene72720:CDS |
| TGTTAAACATAACGATGTTC+CGG | 0.404869 | 5.4:+16429215 | MS.gene72720:CDS |
| TTGATGGATGAGATGTTAAA+GGG | 0.406557 | 5.4:-16428343 | None:intergenic |
| GCTAAACCAATGCCGTTAGA+AGG | 0.408884 | 5.4:-16428949 | None:intergenic |
| GGTGTAAGCTTGATTTCATA+AGG | 0.411021 | 5.4:-16429030 | None:intergenic |
| ATTATATGGGGAAGAAGAAT+AGG | 0.419503 | 5.4:+16429667 | MS.gene72720:CDS |
| GAAGTTGGATGTAGATTGTA+TGG | 0.425213 | 5.4:+16429765 | MS.gene72720:CDS |
| TGCTTACTTGTTATTATGAT+GGG | 0.425997 | 5.4:-16428298 | None:intergenic |
| GGGAGTGATGATGGTGTTTG+TGG | 0.434132 | 5.4:-16428484 | None:intergenic |
| CGTGGAAGAAACTGTGGGTT+TGG | 0.439102 | 5.4:-16428700 | None:intergenic |
| ACCATTATCAGCACGAAACC+TGG | 0.440073 | 5.4:+16429623 | MS.gene72720:CDS |
| CCTAAAATTGACGGCGACAC+TGG | 0.451020 | 5.4:+16429123 | MS.gene72720:CDS |
| AAACCATACGGCACCCTCCT+TGG | 0.455270 | 5.4:-16429957 | None:intergenic |
| TTGTATGGAGAGGATTGTTA+TGG | 0.460237 | 5.4:+16429780 | MS.gene72720:CDS |
| CATTTATCACCCCGAAATCC+AGG | 0.462433 | 5.4:-16429641 | None:intergenic |
| CCGATCCATCAAAAGTTTCA+AGG | 0.463927 | 5.4:+16429364 | MS.gene72720:CDS |
| AACGGCGCTTACATAAGAAA+TGG | 0.467272 | 5.4:+16428676 | MS.gene72720:CDS |
| ACTCCTGAAATCTTCGGCAT+TGG | 0.467844 | 5.4:-16429714 | None:intergenic |
| TAACACCATTTGCATCAAAA+CGG | 0.472715 | 5.4:-16429197 | None:intergenic |
| CGCGATCAATGCGTGGGATG+GGG | 0.473648 | 5.4:+16429464 | MS.gene72720:CDS |
| TACAATCCTTCTAACGGCAT+TGG | 0.476143 | 5.4:+16428943 | MS.gene72720:CDS |
| ACGCGATCAATGCGTGGGAT+GGG | 0.477959 | 5.4:+16429463 | MS.gene72720:CDS |
| ACACTTCCACCGTCAGTTAA+CGG | 0.480380 | 5.4:+16428658 | MS.gene72720:CDS |
| TGCTCGATGGAGAGAACATT+CGG | 0.481558 | 5.4:-16429519 | None:intergenic |
| AAAACACGTTTGGTATAAGT+TGG | 0.483154 | 5.4:-16428849 | None:intergenic |
| GTGACGAGTCGAAGATGAAA+TGG | 0.483688 | 5.4:+16429412 | MS.gene72720:CDS |
| TTATGTGCATGATGAGAAGA+AGG | 0.484903 | 5.4:+16429866 | MS.gene72720:CDS |
| GTTTGCCGTTAAAATCTTGA+CGG | 0.485908 | 5.4:-16429077 | None:intergenic |
| CACGCGATCAATGCGTGGGA+TGG | 0.488713 | 5.4:+16429462 | MS.gene72720:CDS |
| CCTCTTGACATGATTTCTGG+TGG | 0.488783 | 5.4:+16429327 | MS.gene72720:CDS |
| ATGAAATGGTTCGATGTGCC+AGG | 0.489596 | 5.4:+16429426 | MS.gene72720:CDS |
| GTCTGGGATTGTGATGTTTG+GGG | 0.492989 | 5.4:-16428379 | None:intergenic |
| TTGAAACCAGAAAACACGTT+TGG | 0.493801 | 5.4:-16428859 | None:intergenic |
| ATTGTTTGGATATCACCGTT+TGG | 0.495988 | 5.4:-16429051 | None:intergenic |
| AACGGTGATATCCAAACAAT+CGG | 0.496479 | 5.4:+16429054 | MS.gene72720:CDS |
| GAAGAATAGGTTTGTTTATG+CGG | 0.496498 | 5.4:+16429680 | MS.gene72720:CDS |
| AAGGGAGGGATAGAAGTTGT+TGG | 0.498248 | 5.4:-16428325 | None:intergenic |
| TTCACCACTCCTGAAATCTT+CGG | 0.499358 | 5.4:-16429720 | None:intergenic |
| TTAATGATTTCACATTGTGT+TGG | 0.501774 | 5.4:-16428631 | None:intergenic |
| CATGATTTCTGGTGGTTCAC+CGG | 0.502402 | 5.4:+16429335 | MS.gene72720:CDS |
| TCCCTACGACACCGACAACT+TGG | 0.502703 | 5.4:-16430012 | None:intergenic |
| GTCGCCGGAGTTTGAGATTG+TGG | 0.504977 | 5.4:+16429920 | MS.gene72720:CDS |
| TACAAAATCGAAAACGAAGC+TGG | 0.505480 | 5.4:+16428823 | MS.gene72720:CDS |
| AGTAATGCTGGGAGTGATGA+TGG | 0.506662 | 5.4:-16428493 | None:intergenic |
| AAAGGAGGATGGTGAAGAAG+AGG | 0.507917 | 5.4:+16429824 | MS.gene72720:CDS |
| GGTCTTGTCATGGAGAAAAC+CGG | 0.510037 | 5.4:-16429234 | None:intergenic |
| GGTTTGTTTATGCGGCAATT+GGG | 0.511453 | 5.4:+16429688 | MS.gene72720:CDS |
| ACTGCTCATCCTAAAATTGA+CGG | 0.512038 | 5.4:+16429114 | MS.gene72720:CDS |
| ATGATTTCACATTGTGTTGG+AGG | 0.513822 | 5.4:-16428628 | None:intergenic |
| GGAGTTTGAGATTGTGGCGG+AGG | 0.515266 | 5.4:+16429926 | MS.gene72720:CDS |
| ATTTCTGGTGGTTCACCGGT+AGG | 0.517067 | 5.4:+16429339 | MS.gene72720:CDS |
| TGGATGAGATGTTAAAGGGA+GGG | 0.519687 | 5.4:-16428339 | None:intergenic |
| CACCAAGTTGTCGGTGTCGT+AGG | 0.521647 | 5.4:+16430010 | MS.gene72720:CDS |
| CACGCCATTACAATCTCAAA+CGG | 0.522637 | 5.4:+16428760 | MS.gene72720:CDS |
| ACCAAGTTGTCGGTGTCGTA+GGG | 0.523828 | 5.4:+16430011 | MS.gene72720:CDS |
| GCGAAATCATGAAGAAAAGA+AGG | 0.525570 | 5.4:-16429255 | None:intergenic |
| CCATCAAAAGTTTCAAGGAT+CGG | 0.531863 | 5.4:+16429369 | MS.gene72720:CDS |
| TGATTTCACATTGTGTTGGA+GGG | 0.543631 | 5.4:-16428627 | None:intergenic |
| TCATGCACGCGATCAATGCG+TGG | 0.547541 | 5.4:+16429457 | MS.gene72720:CDS |
| GAAATCAAGCTTACACCAAA+CGG | 0.548084 | 5.4:+16429036 | MS.gene72720:CDS |
| GTGTTTACGGATATTCAGCT+TGG | 0.550330 | 5.4:+16429297 | MS.gene72720:CDS |
| TTTGATGGATCGGAACCTAC+CGG | 0.550565 | 5.4:-16429354 | None:intergenic |
| ATTTGTAAGTTTGAACGTAA+CGG | 0.551232 | 5.4:-16428801 | None:intergenic |
| GGTGATGGATGCAAAGTCGC+CGG | 0.561761 | 5.4:+16429905 | MS.gene72720:CDS |
| TAAGCTTGATTTCATAAGGA+AGG | 0.561782 | 5.4:-16429026 | None:intergenic |
| ATGGATGAGATGTTAAAGGG+AGG | 0.562849 | 5.4:-16428340 | None:intergenic |
| GGAGGGAGTTCGTCTAAGAC+TGG | 0.563695 | 5.4:-16428610 | None:intergenic |
| TACCACCTCTTCGACGGTGA+TGG | 0.565615 | 5.4:+16428730 | MS.gene72720:CDS |
| TATGGAGAGGATTGTTATGG+TGG | 0.566167 | 5.4:+16429783 | MS.gene72720:CDS |
| GGAGGGATAGAAGTTGTTGG+TGG | 0.570969 | 5.4:-16428322 | None:intergenic |
| TGCCATCACCGTCGAAGAGG+TGG | 0.571502 | 5.4:-16428732 | None:intergenic |
| GAGTGACATCACCAAGTTGT+CGG | 0.571610 | 5.4:+16430001 | MS.gene72720:CDS |
| TCACCGTCGAAGAGGTGGTA+AGG | 0.575068 | 5.4:-16428727 | None:intergenic |
| TCCGCCACAATCTCAAACTC+CGG | 0.575111 | 5.4:-16429924 | None:intergenic |
| CTTATAGCTTCTGCTGCACG+TGG | 0.575305 | 5.4:+16428886 | MS.gene72720:CDS |
| AGGATGAGCAGTCATACTCA+TGG | 0.575328 | 5.4:-16429103 | None:intergenic |
| AACGTAACGGCTACAGAGTG+TGG | 0.575577 | 5.4:-16428788 | None:intergenic |
| GCGTGCATGATATTAAATCC+TGG | 0.576415 | 5.4:-16429444 | None:intergenic |
| TATGTGCATGATGAGAAGAA+GGG | 0.578787 | 5.4:+16429867 | MS.gene72720:CDS |
| AAGAAAAGAAGGTCTTGTCA+TGG | 0.578816 | 5.4:-16429244 | None:intergenic |
| AAACAAAGCCAAACTTGTGT+TGG | 0.580683 | 5.4:-16428971 | None:intergenic |
| TCTCTCCATCGTATGCTCGA+TGG | 0.582461 | 5.4:-16429532 | None:intergenic |
| TATGACACGTGCCGCGGTGA+CGG | 0.586484 | 5.4:-16428911 | None:intergenic |
| AACAATCCATGAAAACCATA+CGG | 0.587297 | 5.4:-16429969 | None:intergenic |
| AATGTGTTGAGTAGTAATGC+TGG | 0.590033 | 5.4:-16428505 | None:intergenic |
| CCACCAGAAATCATGTCAAG+AGG | 0.590568 | 5.4:-16429327 | None:intergenic |
| TGATAAATGGTGATTATATG+GGG | 0.591790 | 5.4:+16429655 | MS.gene72720:CDS |
| GATGGTGAAGAAGAGGATGA+TGG | 0.592671 | 5.4:+16429831 | MS.gene72720:CDS |
| CGGAGGTGAAGTTGCCAAGG+AGG | 0.593842 | 5.4:+16429943 | MS.gene72720:CDS |
| ATGTAAGCGCCGTTAACTGA+CGG | 0.594999 | 5.4:-16428667 | None:intergenic |
| GTGGGATGGGGAAGATGATG+AGG | 0.595645 | 5.4:+16429476 | MS.gene72720:CDS |
| GGAGGTGAAGTTGCCAAGGA+GGG | 0.600925 | 5.4:+16429944 | MS.gene72720:CDS |
| TTGCCAAGGAGGGTGCCGTA+TGG | 0.604907 | 5.4:+16429954 | MS.gene72720:CDS |
| ATGAGAAGAAGGGAGAGTCA+AGG | 0.607088 | 5.4:+16429877 | MS.gene72720:CDS |
| GTGTTGAAAGGTGAGGAAGT+TGG | 0.610000 | 5.4:+16429750 | MS.gene72720:CDS |
| GGACAATACAATCCTTCTAA+CGG | 0.610598 | 5.4:+16428937 | MS.gene72720:CDS |
| TGGCGGAGGTGAAGTTGCCA+AGG | 0.613374 | 5.4:+16429940 | MS.gene72720:CDS |
| GGTCCACGTGGAAGAAACTG+TGG | 0.628559 | 5.4:-16428706 | None:intergenic |
| TCCAGATATGACACGTGCCG+CGG | 0.630149 | 5.4:-16428917 | None:intergenic |
| GCATGCCATCACCGTCGAAG+AGG | 0.632272 | 5.4:-16428735 | None:intergenic |
| GTGAAGATTGATGTGTTGAA+AGG | 0.637036 | 5.4:+16429738 | MS.gene72720:CDS |
| CATGCACGCGATCAATGCGT+GGG | 0.637360 | 5.4:+16429458 | MS.gene72720:CDS |
| GGACCTTACCACCTCTTCGA+CGG | 0.645380 | 5.4:+16428724 | MS.gene72720:CDS |
| TGGATGTAGATTGTATGGAG+AGG | 0.648715 | 5.4:+16429770 | MS.gene72720:CDS |
| AACCCACAGTTTCTTCCACG+TGG | 0.651198 | 5.4:+16428703 | MS.gene72720:CDS |
| GCCGGAGTTTGAGATTGTGG+CGG | 0.652926 | 5.4:+16429923 | MS.gene72720:CDS |
| TGAAGATAAATATTAAAACA+GGG | 0.655068 | 5.4:+16429586 | MS.gene72720:CDS |
| AGCACGAAACCTGGATTTCG+GGG | 0.660216 | 5.4:+16429632 | MS.gene72720:CDS |
| GATTGATGTGTTGAAAGGTG+AGG | 0.662195 | 5.4:+16429743 | MS.gene72720:CDS |
| AATGCCGAAGATTTCAGGAG+TGG | 0.663954 | 5.4:+16429716 | MS.gene72720:CDS |
| TCTCTCCATCGAGCATACGA+TGG | 0.671121 | 5.4:+16429527 | MS.gene72720:CDS |
| ATGTGTTGAGTAGTAATGCT+GGG | 0.681095 | 5.4:-16428504 | None:intergenic |
| GTCCACGTGGAAGAAACTGT+GGG | 0.688234 | 5.4:-16428705 | None:intergenic |
| ATGGTGGCATAGGACCGTAA+CGG | 0.707951 | 5.4:-16429161 | None:intergenic |
| TAAGCGCCGTTAACTGACGG+TGG | 0.708248 | 5.4:-16428664 | None:intergenic |
| GACTCGTCACTAGCATAACG+AGG | 0.742544 | 5.4:-16429399 | None:intergenic |
| AAGAGGTGGTAAGGTCCACG+TGG | 0.744047 | 5.4:-16428718 | None:intergenic |
| TGCACGTGGCTCCGTCACCG+CGG | 0.771494 | 5.4:+16428900 | MS.gene72720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAGATAAATATTAAAACA+GGG | + | chr5.4:16429586-16429605 | MS.gene72720:CDS | 15.0% |
| !! | GTGAAGATAAATATTAAAAC+AGG | + | chr5.4:16429585-16429604 | MS.gene72720:CDS | 20.0% |
| ! | AAACGGAAATAGGTTAAAAA+TGG | - | chr5.4:16429183-16429202 | None:intergenic | 25.0% |
| ! | ACACAATGTGAAATCATTAA+AGG | + | chr5.4:16428634-16428653 | MS.gene72720:CDS | 25.0% |
| ! | ATTTGTAAGTTTGAACGTAA+CGG | - | chr5.4:16428804-16428823 | None:intergenic | 25.0% |
| ! | GTGATAAATGGTGATTATAT+GGG | + | chr5.4:16429654-16429673 | MS.gene72720:CDS | 25.0% |
| ! | TGATAAATGGTGATTATATG+GGG | + | chr5.4:16429655-16429674 | MS.gene72720:CDS | 25.0% |
| ! | TTAATGATTTCACATTGTGT+TGG | - | chr5.4:16428634-16428653 | None:intergenic | 25.0% |
| !! | TAAAAAGTATGCTGTGTTTA+CGG | + | chr5.4:16429284-16429303 | MS.gene72720:CDS | 25.0% |
| !!! | TGCTTACTTGTTATTATGAT+GGG | - | chr5.4:16428301-16428320 | None:intergenic | 25.0% |
| !!! | TTGCTTACTTGTTATTATGA+TGG | - | chr5.4:16428302-16428321 | None:intergenic | 25.0% |
| !!! | TTGTTATTATGATGGGTTTT+GGG | - | chr5.4:16428294-16428313 | None:intergenic | 25.0% |
| !!! | TTTTGAGACAAAACATGTTT+TGG | - | chr5.4:16428583-16428602 | None:intergenic | 25.0% |
| AAAACACGTTTGGTATAAGT+TGG | - | chr5.4:16428852-16428871 | None:intergenic | 30.0% | |
| AACAATCCATGAAAACCATA+CGG | - | chr5.4:16429972-16429991 | None:intergenic | 30.0% | |
| ATTATATGGGGAAGAAGAAT+AGG | + | chr5.4:16429667-16429686 | MS.gene72720:CDS | 30.0% | |
| ATTTGCATCAAAACGGAAAT+AGG | - | chr5.4:16429193-16429212 | None:intergenic | 30.0% | |
| GGTGATAAATGGTGATTATA+TGG | + | chr5.4:16429653-16429672 | MS.gene72720:CDS | 30.0% | |
| TAACACCATTTGCATCAAAA+CGG | - | chr5.4:16429200-16429219 | None:intergenic | 30.0% | |
| TAAGCTTGATTTCATAAGGA+AGG | - | chr5.4:16429029-16429048 | None:intergenic | 30.0% | |
| TGTTAAACATAACGATGTTC+CGG | + | chr5.4:16429215-16429234 | MS.gene72720:CDS | 30.0% | |
| ! | GAAGAATAGGTTTGTTTATG+CGG | + | chr5.4:16429680-16429699 | MS.gene72720:CDS | 30.0% |
| ! | GGTAACAAACTTTTTGCTTT+AGG | + | chr5.4:16428994-16429013 | MS.gene72720:CDS | 30.0% |
| ! | TTGATGGATGAGATGTTAAA+GGG | - | chr5.4:16428346-16428365 | None:intergenic | 30.0% |
| ! | TTTGATGGATGAGATGTTAA+AGG | - | chr5.4:16428347-16428366 | None:intergenic | 30.0% |
| !! | CACAGCATACTTTTTAGTAA+TGG | - | chr5.4:16429280-16429299 | None:intergenic | 30.0% |
| !! | TATTTCCGTTTTGATGCAAA+TGG | + | chr5.4:16429192-16429211 | MS.gene72720:CDS | 30.0% |
| !! | TTTTCATGGATTGTTTGTGA+AGG | + | chr5.4:16429977-16429996 | MS.gene72720:CDS | 30.0% |
| !! | TTTTCCGTTTGAGATTGTAA+TGG | - | chr5.4:16428767-16428786 | None:intergenic | 30.0% |
| !!! | CTTGTTATTATGATGGGTTT+TGG | - | chr5.4:16428295-16428314 | None:intergenic | 30.0% |
| !!! | TTGTGGTTTTTTGAGGTTAT+GGG | - | chr5.4:16428470-16428489 | None:intergenic | 30.0% |
| !!! | TTTGTGGTTTTTTGAGGTTA+TGG | - | chr5.4:16428471-16428490 | None:intergenic | 30.0% |
| AAACAAAGCCAAACTTGTGT+TGG | - | chr5.4:16428974-16428993 | None:intergenic | 35.0% | |
| AACGGTGATATCCAAACAAT+CGG | + | chr5.4:16429054-16429073 | MS.gene72720:CDS | 35.0% | |
| AATCCTCTTGACATGATTTC+TGG | + | chr5.4:16429324-16429343 | MS.gene72720:CDS | 35.0% | |
| AATGTGTTGAGTAGTAATGC+TGG | - | chr5.4:16428508-16428527 | None:intergenic | 35.0% | |
| ACTGCTCATCCTAAAATTGA+CGG | + | chr5.4:16429114-16429133 | MS.gene72720:CDS | 35.0% | |
| ATGATTTCACATTGTGTTGG+AGG | - | chr5.4:16428631-16428650 | None:intergenic | 35.0% | |
| ATGTGTTGAGTAGTAATGCT+GGG | - | chr5.4:16428507-16428526 | None:intergenic | 35.0% | |
| ATTGTTTGGATATCACCGTT+TGG | - | chr5.4:16429054-16429073 | None:intergenic | 35.0% | |
| CCATCAAAAGTTTCAAGGAT+CGG | + | chr5.4:16429369-16429388 | MS.gene72720:CDS | 35.0% | |
| CGGAAATAGGTTAAAAATGG+TGG | - | chr5.4:16429180-16429199 | None:intergenic | 35.0% | |
| GAAATCAAGCTTACACCAAA+CGG | + | chr5.4:16429036-16429055 | MS.gene72720:CDS | 35.0% | |
| GAAGTTGGATGTAGATTGTA+TGG | + | chr5.4:16429765-16429784 | MS.gene72720:CDS | 35.0% | |
| GCGAAATCATGAAGAAAAGA+AGG | - | chr5.4:16429258-16429277 | None:intergenic | 35.0% | |
| GGACAATACAATCCTTCTAA+CGG | + | chr5.4:16428937-16428956 | MS.gene72720:CDS | 35.0% | |
| GGTGTAAGCTTGATTTCATA+AGG | - | chr5.4:16429033-16429052 | None:intergenic | 35.0% | |
| GTGAAGATTGATGTGTTGAA+AGG | + | chr5.4:16429738-16429757 | MS.gene72720:CDS | 35.0% | |
| GTTTGCCGTTAAAATCTTGA+CGG | - | chr5.4:16429080-16429099 | None:intergenic | 35.0% | |
| TACAAAATCGAAAACGAAGC+TGG | + | chr5.4:16428823-16428842 | MS.gene72720:CDS | 35.0% | |
| TAGGTTAAAAATGGTGGCAT+AGG | - | chr5.4:16429174-16429193 | None:intergenic | 35.0% | |
| TATGTGCATGATGAGAAGAA+GGG | + | chr5.4:16429867-16429886 | MS.gene72720:CDS | 35.0% | |
| TGATTTCACATTGTGTTGGA+GGG | - | chr5.4:16428630-16428649 | None:intergenic | 35.0% | |
| TTATGTGCATGATGAGAAGA+AGG | + | chr5.4:16429866-16429885 | MS.gene72720:CDS | 35.0% | |
| TTGAAACCAGAAAACACGTT+TGG | - | chr5.4:16428862-16428881 | None:intergenic | 35.0% | |
| TTGTATGGAGAGGATTGTTA+TGG | + | chr5.4:16429780-16429799 | MS.gene72720:CDS | 35.0% | |
| ! | AAGAAAAGAAGGTCTTGTCA+TGG | - | chr5.4:16429247-16429266 | None:intergenic | 35.0% |
| ! | CTTATACCAAACGTGTTTTC+TGG | + | chr5.4:16428853-16428872 | MS.gene72720:CDS | 35.0% |
| ! | GAAACTTTTGCTTTCCGTTA+CGG | + | chr5.4:16429147-16429166 | MS.gene72720:CDS | 35.0% |
| !! | AACACAAGTTTGGCTTTGTT+TGG | + | chr5.4:16428973-16428992 | MS.gene72720:CDS | 35.0% |
| !! | ACATGTTTTGGATCTACAGA+TGG | - | chr5.4:16428571-16428590 | None:intergenic | 35.0% |
| !! | CCTTGAAACTTTTGATGGAT+CGG | - | chr5.4:16429367-16429386 | None:intergenic | 35.0% |
| !! | TGATGTTTGGGGTTTTTCTT+TGG | - | chr5.4:16428371-16428390 | None:intergenic | 35.0% |
| !! | TTTTATTGGTGGGTCTATGA+AGG | - | chr5.4:16428548-16428567 | None:intergenic | 35.0% |
| !!! | ATGGTGTTTGTGGTTTTTTG+AGG | - | chr5.4:16428477-16428496 | None:intergenic | 35.0% |
| !!! | CTACAGATGGTTTTATTGGT+GGG | - | chr5.4:16428558-16428577 | None:intergenic | 35.0% |
| !!! | GGATCTACAGATGGTTTTAT+TGG | - | chr5.4:16428562-16428581 | None:intergenic | 35.0% |
| !!! | GGGTTTTTCTTTGGTTTTGA+TGG | - | chr5.4:16428362-16428381 | None:intergenic | 35.0% |
| !!! | TCTACAGATGGTTTTATTGG+TGG | - | chr5.4:16428559-16428578 | None:intergenic | 35.0% |
| AACGGCGCTTACATAAGAAA+TGG | + | chr5.4:16428676-16428695 | MS.gene72720:CDS | 40.0% | |
| AATCCAATGCCGAAGATTTC+AGG | + | chr5.4:16429711-16429730 | MS.gene72720:CDS | 40.0% | |
| ATGGATGAGATGTTAAAGGG+AGG | - | chr5.4:16428343-16428362 | None:intergenic | 40.0% | |
| CACGCCATTACAATCTCAAA+CGG | + | chr5.4:16428760-16428779 | MS.gene72720:CDS | 40.0% | |
| CCGATCCATCAAAAGTTTCA+AGG | + | chr5.4:16429364-16429383 | MS.gene72720:CDS | 40.0% | |
| GATTGATGTGTTGAAAGGTG+AGG | + | chr5.4:16429743-16429762 | MS.gene72720:CDS | 40.0% | |
| GCGTGCATGATATTAAATCC+TGG | - | chr5.4:16429447-16429466 | None:intergenic | 40.0% | |
| GTGTTTACGGATATTCAGCT+TGG | + | chr5.4:16429297-16429316 | MS.gene72720:CDS | 40.0% | |
| TACAATCCTTCTAACGGCAT+TGG | + | chr5.4:16428943-16428962 | MS.gene72720:CDS | 40.0% | |
| TATGGAGAGGATTGTTATGG+TGG | + | chr5.4:16429783-16429802 | MS.gene72720:CDS | 40.0% | |
| TGGATGAGATGTTAAAGGGA+GGG | - | chr5.4:16428342-16428361 | None:intergenic | 40.0% | |
| TGGATGTAGATTGTATGGAG+AGG | + | chr5.4:16429770-16429789 | MS.gene72720:CDS | 40.0% | |
| TGGTTTAGCCAACACAAGTT+TGG | + | chr5.4:16428963-16428982 | MS.gene72720:CDS | 40.0% | |
| TTCACCACTCCTGAAATCTT+CGG | - | chr5.4:16429723-16429742 | None:intergenic | 40.0% | |
| ! | AGGTTTGTTTATGCGGCAAT+TGG | + | chr5.4:16429687-16429706 | MS.gene72720:CDS | 40.0% |
| ! | ATCGGCCGTCAAGATTTTAA+CGG | + | chr5.4:16429072-16429091 | MS.gene72720:CDS | 40.0% |
| ! | CCGATCCTTGAAACTTTTGA+TGG | - | chr5.4:16429372-16429391 | None:intergenic | 40.0% |
| ! | GGTGTAGGAAGAGTTTTTGT+GGG | - | chr5.4:16428430-16428449 | None:intergenic | 40.0% |
| ! | GGTTTGTTTATGCGGCAATT+GGG | + | chr5.4:16429688-16429707 | MS.gene72720:CDS | 40.0% |
| ! | GTGTAGGAAGAGTTTTTGTG+GGG | - | chr5.4:16428429-16428448 | None:intergenic | 40.0% |
| ! | TGTAGGAAGAGTTTTTGTGG+GGG | - | chr5.4:16428428-16428447 | None:intergenic | 40.0% |
| !!! | AGAGTCAAGGTTTTTGGTGA+TGG | + | chr5.4:16429890-16429909 | MS.gene72720:CDS | 40.0% |
| !!! | TGGTTTTTTGAGGTTATGGG+TGG | - | chr5.4:16428467-16428486 | None:intergenic | 40.0% |
| !!! | TGTAGTGGTGGTGGTTTTTA+GGG | - | chr5.4:16428404-16428423 | None:intergenic | 40.0% |
| !!! | TTTTTTGAGGTTATGGGTGG+TGG | - | chr5.4:16428464-16428483 | None:intergenic | 40.0% |
| AAAGGAGGATGGTGAAGAAG+AGG | + | chr5.4:16429824-16429843 | MS.gene72720:CDS | 45.0% | |
| AAGGGAGGGATAGAAGTTGT+TGG | - | chr5.4:16428328-16428347 | None:intergenic | 45.0% | |
| AATCTTGACGGCCGATTGTT+TGG | - | chr5.4:16429068-16429087 | None:intergenic | 45.0% | |
| AATGCCGAAGATTTCAGGAG+TGG | + | chr5.4:16429716-16429735 | MS.gene72720:CDS | 45.0% | |
| ACACTTCCACCGTCAGTTAA+CGG | + | chr5.4:16428658-16428677 | MS.gene72720:CDS | 45.0% | |
| ACCATTATCAGCACGAAACC+TGG | + | chr5.4:16429623-16429642 | MS.gene72720:CDS | 45.0% | |
| ACTCCTGAAATCTTCGGCAT+TGG | - | chr5.4:16429717-16429736 | None:intergenic | 45.0% | |
| AGGATGAGCAGTCATACTCA+TGG | - | chr5.4:16429106-16429125 | None:intergenic | 45.0% | |
| AGTAATGCTGGGAGTGATGA+TGG | - | chr5.4:16428496-16428515 | None:intergenic | 45.0% | |
| ATGAAATGGTTCGATGTGCC+AGG | + | chr5.4:16429426-16429445 | MS.gene72720:CDS | 45.0% | |
| ATGAGAAGAAGGGAGAGTCA+AGG | + | chr5.4:16429877-16429896 | MS.gene72720:CDS | 45.0% | |
| CATTTATCACCCCGAAATCC+AGG | - | chr5.4:16429644-16429663 | None:intergenic | 45.0% | |
| CCACCAGAAATCATGTCAAG+AGG | - | chr5.4:16429330-16429349 | None:intergenic | 45.0% | |
| CTGGATTTCGGGGTGATAAA+TGG | + | chr5.4:16429642-16429661 | MS.gene72720:CDS | 45.0% | |
| GAGTGACATCACCAAGTTGT+CGG | + | chr5.4:16430001-16430020 | MS.gene72720:CDS | 45.0% | |
| GATGGTGAAGAAGAGGATGA+TGG | + | chr5.4:16429831-16429850 | MS.gene72720:CDS | 45.0% | |
| GCTAAACCAATGCCGTTAGA+AGG | - | chr5.4:16428952-16428971 | None:intergenic | 45.0% | |
| GTGACGAGTCGAAGATGAAA+TGG | + | chr5.4:16429412-16429431 | MS.gene72720:CDS | 45.0% | |
| GTGTTGAAAGGTGAGGAAGT+TGG | + | chr5.4:16429750-16429769 | MS.gene72720:CDS | 45.0% | |
| TCAGCACGAAACCTGGATTT+CGG | + | chr5.4:16429630-16429649 | MS.gene72720:CDS | 45.0% | |
| TCCTCCTTTGCCACGAAAAA+CGG | - | chr5.4:16429813-16429832 | None:intergenic | 45.0% | |
| TGCTCGATGGAGAGAACATT+CGG | - | chr5.4:16429522-16429541 | None:intergenic | 45.0% | |
| ! | ATGTAAGCGCCGTTAACTGA+CGG | - | chr5.4:16428670-16428689 | None:intergenic | 45.0% |
| ! | CCTCTTGACATGATTTCTGG+TGG | + | chr5.4:16429327-16429346 | MS.gene72720:CDS | 45.0% |
| ! | GAAGGGAGAGTCAAGGTTTT+TGG | + | chr5.4:16429884-16429903 | MS.gene72720:CDS | 45.0% |
| ! | GGGTGTAGGAAGAGTTTTTG+TGG | - | chr5.4:16428431-16428450 | None:intergenic | 45.0% |
| ! | GGTCTGGGATTGTGATGTTT+GGG | - | chr5.4:16428383-16428402 | None:intergenic | 45.0% |
| ! | GGTCTTGTCATGGAGAAAAC+CGG | - | chr5.4:16429237-16429256 | None:intergenic | 45.0% |
| ! | GTAGGAAGAGTTTTTGTGGG+GGG | - | chr5.4:16428427-16428446 | None:intergenic | 45.0% |
| ! | GTCTGGGATTGTGATGTTTG+GGG | - | chr5.4:16428382-16428401 | None:intergenic | 45.0% |
| ! | TCCAGGTTTCGTGCTGATAA+TGG | - | chr5.4:16429627-16429646 | None:intergenic | 45.0% |
| ! | TTTGATGGATCGGAACCTAC+CGG | - | chr5.4:16429357-16429376 | None:intergenic | 45.0% |
| ! | TTTTTCGTGGCAAAGGAGGA+TGG | + | chr5.4:16429813-16429832 | MS.gene72720:CDS | 45.0% |
| !! | CATGATTTCTGGTGGTTCAC+CGG | + | chr5.4:16429335-16429354 | MS.gene72720:CDS | 45.0% |
| !!! | GTGTAGTGGTGGTGGTTTTT+AGG | - | chr5.4:16428405-16428424 | None:intergenic | 45.0% |
| AACCCACAGTTTCTTCCACG+TGG | + | chr5.4:16428703-16428722 | MS.gene72720:CDS | 50.0% | |
| AACGTAACGGCTACAGAGTG+TGG | - | chr5.4:16428791-16428810 | None:intergenic | 50.0% | |
| AGCACGAAACCTGGATTTCG+GGG | + | chr5.4:16429632-16429651 | MS.gene72720:CDS | 50.0% | |
| ATGGTGGCATAGGACCGTAA+CGG | - | chr5.4:16429164-16429183 | None:intergenic | 50.0% | |
| CAGCACGAAACCTGGATTTC+GGG | + | chr5.4:16429631-16429650 | MS.gene72720:CDS | 50.0% | |
| CCTAAAATTGACGGCGACAC+TGG | + | chr5.4:16429123-16429142 | MS.gene72720:CDS | 50.0% | |
| CGTGGAAGAAACTGTGGGTT+TGG | - | chr5.4:16428703-16428722 | None:intergenic | 50.0% | |
| CTTATAGCTTCTGCTGCACG+TGG | + | chr5.4:16428886-16428905 | MS.gene72720:CDS | 50.0% | |
| GACTCGTCACTAGCATAACG+AGG | - | chr5.4:16429402-16429421 | None:intergenic | 50.0% | |
| GGAGGGATAGAAGTTGTTGG+TGG | - | chr5.4:16428325-16428344 | None:intergenic | 50.0% | |
| GTCCACGTGGAAGAAACTGT+GGG | - | chr5.4:16428708-16428727 | None:intergenic | 50.0% | |
| TCCGCCACAATCTCAAACTC+CGG | - | chr5.4:16429927-16429946 | None:intergenic | 50.0% | |
| TCTCTCCATCGAGCATACGA+TGG | + | chr5.4:16429527-16429546 | MS.gene72720:CDS | 50.0% | |
| TCTCTCCATCGTATGCTCGA+TGG | - | chr5.4:16429535-16429554 | None:intergenic | 50.0% | |
| ! | CCAGTGTCGCCGTCAATTTT+AGG | - | chr5.4:16429126-16429145 | None:intergenic | 50.0% |
| ! | GGGTCTGGGATTGTGATGTT+TGG | - | chr5.4:16428384-16428403 | None:intergenic | 50.0% |
| ! | TTTGAGGTTATGGGTGGTGG+TGG | - | chr5.4:16428461-16428480 | None:intergenic | 50.0% |
| !! | AGTTTTTGTGGGGGGTGTAG+TGG | - | chr5.4:16428419-16428438 | None:intergenic | 50.0% |
| !! | ATTTCTGGTGGTTCACCGGT+AGG | + | chr5.4:16429339-16429358 | MS.gene72720:CDS | 50.0% |
| !! | GGGAGTGATGATGGTGTTTG+TGG | - | chr5.4:16428487-16428506 | None:intergenic | 50.0% |
| !!! | AGGGTGCCGTATGGTTTTCA+TGG | + | chr5.4:16429963-16429982 | MS.gene72720:CDS | 50.0% |
| !!! | GGTGGTGGTTTTTAGGGTCT+GGG | - | chr5.4:16428398-16428417 | None:intergenic | 50.0% |
| !!! | TGAGCCGTTTTTCGTGGCAA+AGG | + | chr5.4:16429806-16429825 | MS.gene72720:CDS | 50.0% |
| !!! | TGGTGGTGGTTTTTAGGGTC+TGG | - | chr5.4:16428399-16428418 | None:intergenic | 50.0% |
| AAACCATACGGCACCCTCCT+TGG | - | chr5.4:16429960-16429979 | None:intergenic | 55.0% | |
| AAGAGGTGGTAAGGTCCACG+TGG | - | chr5.4:16428721-16428740 | None:intergenic | 55.0% | |
| ACGCGATCAATGCGTGGGAT+GGG | + | chr5.4:16429463-16429482 | MS.gene72720:CDS | 55.0% | |
| CATGCACGCGATCAATGCGT+GGG | + | chr5.4:16429458-16429477 | MS.gene72720:CDS | 55.0% | |
| GGACCTTACCACCTCTTCGA+CGG | + | chr5.4:16428724-16428743 | MS.gene72720:CDS | 55.0% | |
| GGAGGTGAAGTTGCCAAGGA+GGG | + | chr5.4:16429944-16429963 | MS.gene72720:CDS | 55.0% | |
| GGTCCACGTGGAAGAAACTG+TGG | - | chr5.4:16428709-16428728 | None:intergenic | 55.0% | |
| GTGGGATGGGGAAGATGATG+AGG | + | chr5.4:16429476-16429495 | MS.gene72720:CDS | 55.0% | |
| TACCACCTCTTCGACGGTGA+TGG | + | chr5.4:16428730-16428749 | MS.gene72720:CDS | 55.0% | |
| TCACCGTCGAAGAGGTGGTA+AGG | - | chr5.4:16428730-16428749 | None:intergenic | 55.0% | |
| TCATGCACGCGATCAATGCG+TGG | + | chr5.4:16429457-16429476 | MS.gene72720:CDS | 55.0% | |
| TCCAGATATGACACGTGCCG+CGG | - | chr5.4:16428920-16428939 | None:intergenic | 55.0% | |
| ! | GCCGGAGTTTGAGATTGTGG+CGG | + | chr5.4:16429923-16429942 | MS.gene72720:CDS | 55.0% |
| ! | GGAGGGAGTTCGTCTAAGAC+TGG | - | chr5.4:16428613-16428632 | None:intergenic | 55.0% |
| ! | GGAGTTTGAGATTGTGGCGG+AGG | + | chr5.4:16429926-16429945 | MS.gene72720:CDS | 55.0% |
| ! | GTCGCCGGAGTTTGAGATTG+TGG | + | chr5.4:16429920-16429939 | MS.gene72720:CDS | 55.0% |
| ! | TAAGCGCCGTTAACTGACGG+TGG | - | chr5.4:16428667-16428686 | None:intergenic | 55.0% |
| !! | GGTGATGGATGCAAAGTCGC+CGG | + | chr5.4:16429905-16429924 | MS.gene72720:CDS | 55.0% |
| !! | TTATGGGTGGTGGTGGTGGT+GGG | - | chr5.4:16428454-16428473 | None:intergenic | 55.0% |
| !! | TTTTGTGGGGGGTGTAGTGG+TGG | - | chr5.4:16428416-16428435 | None:intergenic | 55.0% |
| !!! | GCCGTTTTTCGTGGCAAAGG+AGG | + | chr5.4:16429809-16429828 | MS.gene72720:CDS | 55.0% |
| !!! | TGGTGGTGAGCCGTTTTTCG+TGG | + | chr5.4:16429800-16429819 | MS.gene72720:CDS | 55.0% |
| ACCGCGGCACGTGTCATATC+TGG | + | chr5.4:16428916-16428935 | MS.gene72720:CDS | 60.0% | |
| CACGCGATCAATGCGTGGGA+TGG | + | chr5.4:16429462-16429481 | MS.gene72720:CDS | 60.0% | |
| CGCGATCAATGCGTGGGATG+GGG | + | chr5.4:16429464-16429483 | MS.gene72720:CDS | 60.0% | |
| CGGAGGTGAAGTTGCCAAGG+AGG | + | chr5.4:16429943-16429962 | MS.gene72720:CDS | 60.0% | |
| GCATGCCATCACCGTCGAAG+AGG | - | chr5.4:16428738-16428757 | None:intergenic | 60.0% | |
| TATGACACGTGCCGCGGTGA+CGG | - | chr5.4:16428914-16428933 | None:intergenic | 60.0% | |
| TGCCATCACCGTCGAAGAGG+TGG | - | chr5.4:16428735-16428754 | None:intergenic | 60.0% | |
| TGGCGGAGGTGAAGTTGCCA+AGG | + | chr5.4:16429940-16429959 | MS.gene72720:CDS | 60.0% | |
| !! | GAGGTTATGGGTGGTGGTGG+TGG | - | chr5.4:16428458-16428477 | None:intergenic | 60.0% |
| !! | GTTATGGGTGGTGGTGGTGG+TGG | - | chr5.4:16428455-16428474 | None:intergenic | 60.0% |
| !! | TATGGGTGGTGGTGGTGGTG+GGG | - | chr5.4:16428453-16428472 | None:intergenic | 60.0% |
| !! | TTGCCAAGGAGGGTGCCGTA+TGG | + | chr5.4:16429954-16429973 | MS.gene72720:CDS | 60.0% |
| ! | TGTGGGGGGTGTAGTGGTGG+TGG | - | chr5.4:16428413-16428432 | None:intergenic | 65.0% |
| !! | ATGGGTGGTGGTGGTGGTGG+GGG | - | chr5.4:16428452-16428471 | None:intergenic | 65.0% |
| TGCACGTGGCTCCGTCACCG+CGG | + | chr5.4:16428900-16428919 | MS.gene72720:CDS | 70.0% | |
| !! | GTGGTGGTGGTGGGGGGTGT+AGG | - | chr5.4:16428445-16428464 | None:intergenic | 70.0% |
| !! | TGGGTGGTGGTGGTGGTGGG+GGG | - | chr5.4:16428451-16428470 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 16428286 | 16430031 | 16428286 | ID=MS.gene72720 |
| chr5.4 | mRNA | 16428286 | 16430031 | 16428286 | ID=MS.gene72720.t1;Parent=MS.gene72720 |
| chr5.4 | exon | 16428286 | 16430031 | 16428286 | ID=MS.gene72720.t1.exon1;Parent=MS.gene72720.t1 |
| chr5.4 | CDS | 16428286 | 16430031 | 16428286 | ID=cds.MS.gene72720.t1;Parent=MS.gene72720.t1 |
| Gene Sequence |
| Protein sequence |
