Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28105.t1 | ABO77439.1 | 99.8 | 510 | 1 | 0 | 1 | 510 | 1 | 510 | 9.40E-293 | 1015.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28105.t1 | Q9LW96 | 90.4 | 510 | 49 | 0 | 1 | 510 | 1 | 510 | 7.8e-272 | 937.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28105.t1 | A4ULF9 | 99.8 | 510 | 1 | 0 | 1 | 510 | 1 | 510 | 6.8e-293 | 1015.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene28105 | 0.823167 | 1.60E-53 | -1.69E-46 |
| MS.gene049232 | MS.gene28105 | 0.86545 | 5.86E-65 | -1.69E-46 |
| MS.gene049285 | MS.gene28105 | 0.800825 | 1.20E-48 | -1.69E-46 |
| MS.gene049320 | MS.gene28105 | 0.817264 | 3.61E-52 | -1.69E-46 |
| MS.gene049396 | MS.gene28105 | 0.82233 | 2.51E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene28105 | 0.821225 | 4.52E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene28105 | 0.840388 | 8.96E-58 | -1.69E-46 |
| MS.gene049656 | MS.gene28105 | 0.805956 | 1.04E-49 | -1.69E-46 |
| MS.gene049865 | MS.gene28105 | 0.826309 | 2.91E-54 | -1.69E-46 |
| MS.gene05010 | MS.gene28105 | 0.855555 | 5.83E-62 | -1.69E-46 |
| MS.gene050170 | MS.gene28105 | 0.862518 | 4.79E-64 | -1.69E-46 |
| MS.gene050216 | MS.gene28105 | 0.823754 | 1.17E-53 | -1.69E-46 |
| MS.gene050323 | MS.gene28105 | 0.869577 | 2.79E-66 | -1.69E-46 |
| MS.gene050381 | MS.gene28105 | -0.802267 | 6.08E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene28105 | 0.883679 | 3.66E-71 | -1.69E-46 |
| MS.gene050502 | MS.gene28105 | 0.901272 | 3.17E-78 | -1.69E-46 |
| MS.gene050504 | MS.gene28105 | 0.82888 | 7.03E-55 | -1.69E-46 |
| MS.gene050518 | MS.gene28105 | 0.804998 | 1.65E-49 | -1.69E-46 |
| MS.gene050520 | MS.gene28105 | 0.817324 | 3.50E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene28105 | 0.806496 | 8.00E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene28105 | 0.8565 | 3.09E-62 | -1.69E-46 |
| MS.gene050662 | MS.gene28105 | 0.826151 | 3.18E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene28105 | 0.83087 | 2.30E-55 | -1.69E-46 |
| MS.gene050697 | MS.gene28105 | 0.84204 | 3.30E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene28105 | 0.812642 | 3.83E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene28105 | 0.840363 | 9.10E-58 | -1.69E-46 |
| MS.gene05080 | MS.gene28105 | 0.82834 | 9.50E-55 | -1.69E-46 |
| MS.gene05081 | MS.gene28105 | 0.800647 | 1.31E-48 | -1.69E-46 |
| MS.gene050868 | MS.gene28105 | 0.864992 | 8.15E-65 | -1.69E-46 |
| MS.gene050871 | MS.gene28105 | 0.866417 | 2.90E-65 | -1.69E-46 |
| MS.gene050986 | MS.gene28105 | 0.86163 | 8.97E-64 | -1.69E-46 |
| MS.gene051268 | MS.gene28105 | 0.831158 | 1.96E-55 | -1.69E-46 |
| MS.gene051509 | MS.gene28105 | 0.889231 | 2.92E-73 | -1.69E-46 |
| MS.gene051551 | MS.gene28105 | 0.811588 | 6.49E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene28105 | 0.809676 | 1.68E-50 | -1.69E-46 |
| MS.gene051941 | MS.gene28105 | 0.836224 | 1.06E-56 | -1.69E-46 |
| MS.gene052066 | MS.gene28105 | 0.834735 | 2.52E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene28105 | 0.828608 | 8.18E-55 | -1.69E-46 |
| MS.gene052346 | MS.gene28105 | 0.814907 | 1.21E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene28105 | 0.806529 | 7.87E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene28105 | 0.81146 | 6.93E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene28105 | 0.803603 | 3.22E-49 | -1.69E-46 |
| MS.gene052504 | MS.gene28105 | 0.827279 | 1.71E-54 | -1.69E-46 |
| MS.gene052506 | MS.gene28105 | 0.830306 | 3.16E-55 | -1.69E-46 |
| MS.gene052822 | MS.gene28105 | 0.833795 | 4.34E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene28105 | 0.800531 | 1.38E-48 | -1.69E-46 |
| MS.gene052966 | MS.gene28105 | 0.864864 | 8.95E-65 | -1.69E-46 |
| MS.gene052999 | MS.gene28105 | 0.807193 | 5.70E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene28105 | 0.838207 | 3.30E-57 | -1.69E-46 |
| MS.gene053207 | MS.gene28105 | 0.807066 | 6.06E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene28105 | 0.800928 | 1.14E-48 | -1.69E-46 |
| MS.gene053436 | MS.gene28105 | 0.826906 | 2.10E-54 | -1.69E-46 |
| MS.gene053479 | MS.gene28105 | 0.806968 | 6.36E-50 | -1.69E-46 |
| MS.gene053505 | MS.gene28105 | 0.811102 | 8.28E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene28105 | 0.834797 | 2.44E-56 | -1.69E-46 |
| MS.gene053626 | MS.gene28105 | 0.806399 | 8.38E-50 | -1.69E-46 |
| MS.gene053633 | MS.gene28105 | 0.813082 | 3.06E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene28105 | 0.829854 | 4.08E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene28105 | 0.808306 | 3.30E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene28105 | 0.81496 | 1.18E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene28105 | 0.848125 | 7.48E-60 | -1.69E-46 |
| MS.gene054600 | MS.gene28105 | 0.818345 | 2.06E-52 | -1.69E-46 |
| MS.gene05494 | MS.gene28105 | 0.819959 | 8.83E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene28105 | 0.832507 | 9.09E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene28105 | 0.81115 | 8.08E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene28105 | 0.825066 | 5.74E-54 | -1.69E-46 |
| MS.gene055502 | MS.gene28105 | 0.806547 | 7.80E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene28105 | 0.821674 | 3.56E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene28105 | 0.829855 | 4.08E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene28105 | 0.808183 | 3.51E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene28105 | 0.837474 | 5.09E-57 | -1.69E-46 |
| MS.gene055751 | MS.gene28105 | 0.822181 | 2.72E-53 | -1.69E-46 |
| MS.gene055776 | MS.gene28105 | 0.860014 | 2.78E-63 | -1.69E-46 |
| MS.gene05589 | MS.gene28105 | 0.878504 | 2.66E-69 | -1.69E-46 |
| MS.gene056166 | MS.gene28105 | 0.836676 | 8.14E-57 | -1.69E-46 |
| MS.gene056387 | MS.gene28105 | 0.802905 | 4.49E-49 | -1.69E-46 |
| MS.gene056422 | MS.gene28105 | 0.81392 | 2.00E-51 | -1.69E-46 |
| MS.gene056446 | MS.gene28105 | 0.819282 | 1.26E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene28105 | 0.89676 | 2.71E-76 | -1.69E-46 |
| MS.gene056510 | MS.gene28105 | 0.845213 | 4.67E-59 | -1.69E-46 |
| MS.gene056657 | MS.gene28105 | 0.808086 | 3.68E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene28105 | 0.852209 | 5.36E-61 | -1.69E-46 |
| MS.gene057019 | MS.gene28105 | 0.822108 | 2.83E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene28105 | 0.812429 | 4.26E-51 | -1.69E-46 |
| MS.gene057086 | MS.gene28105 | 0.87748 | 6.07E-69 | -1.69E-46 |
| MS.gene057331 | MS.gene28105 | 0.811497 | 6.80E-51 | -1.69E-46 |
| MS.gene057473 | MS.gene28105 | -0.80252 | 5.39E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene28105 | 0.824031 | 1.01E-53 | -1.69E-46 |
| MS.gene057872 | MS.gene28105 | 0.814857 | 1.24E-51 | -1.69E-46 |
| MS.gene057876 | MS.gene28105 | 0.810288 | 1.24E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene28105 | 0.802013 | 6.86E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene28105 | -0.809276 | 2.05E-50 | -1.69E-46 |
| MS.gene058173 | MS.gene28105 | -0.807033 | 6.16E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene28105 | -0.812662 | 3.79E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene28105 | 0.815462 | 9.13E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene28105 | 0.826565 | 2.53E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene28105 | 0.812913 | 3.34E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene28105 | 0.819212 | 1.31E-52 | -1.69E-46 |
| MS.gene058978 | MS.gene28105 | -0.822914 | 1.84E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene28105 | 0.837231 | 5.87E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene28105 | 0.816225 | 6.17E-52 | -1.69E-46 |
| MS.gene059129 | MS.gene28105 | 0.861725 | 8.39E-64 | -1.69E-46 |
| MS.gene05913 | MS.gene28105 | 0.813193 | 2.90E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene28105 | 0.859413 | 4.21E-63 | -1.69E-46 |
| MS.gene059368 | MS.gene28105 | 0.819659 | 1.03E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene28105 | 0.834338 | 3.17E-56 | -1.69E-46 |
| MS.gene059680 | MS.gene28105 | 0.836604 | 8.49E-57 | -1.69E-46 |
| MS.gene059837 | MS.gene28105 | 0.816667 | 4.91E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene28105 | 0.879539 | 1.15E-69 | -1.69E-46 |
| MS.gene06000 | MS.gene28105 | 0.862307 | 5.56E-64 | -1.69E-46 |
| MS.gene060372 | MS.gene28105 | 0.82964 | 4.60E-55 | -1.69E-46 |
| MS.gene060482 | MS.gene28105 | 0.828047 | 1.12E-54 | -1.69E-46 |
| MS.gene060593 | MS.gene28105 | -0.802039 | 6.78E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene28105 | -0.807 | 6.26E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene28105 | 0.806984 | 6.31E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene28105 | 0.818606 | 1.80E-52 | -1.69E-46 |
| MS.gene060778 | MS.gene28105 | 0.885921 | 5.36E-72 | -1.69E-46 |
| MS.gene06077 | MS.gene28105 | 0.838794 | 2.33E-57 | -1.69E-46 |
| MS.gene060835 | MS.gene28105 | 0.833942 | 3.99E-56 | -1.69E-46 |
| MS.gene06097 | MS.gene28105 | 0.836109 | 1.13E-56 | -1.69E-46 |
| MS.gene060982 | MS.gene28105 | 0.882102 | 1.38E-70 | -1.69E-46 |
| MS.gene061218 | MS.gene28105 | 0.837653 | 4.58E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28105.t1 | MTR_8g091320 | 99.216 | 510 | 4 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1047 |
| MS.gene28105.t1 | MTR_3g087590 | 92.353 | 510 | 39 | 0 | 1 | 510 | 1 | 510 | 0.0 | 989 |
| MS.gene28105.t1 | MTR_3g087590 | 90.672 | 461 | 42 | 1 | 1 | 461 | 1 | 460 | 0.0 | 872 |
| MS.gene28105.t1 | MTR_3g087590 | 92.000 | 425 | 34 | 0 | 86 | 510 | 4 | 428 | 0.0 | 824 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28105.t1 | AT5G10170 | 88.431 | 510 | 59 | 0 | 1 | 510 | 1 | 510 | 0.0 | 952 |
| MS.gene28105.t1 | AT2G22240 | 87.255 | 510 | 65 | 0 | 1 | 510 | 1 | 510 | 0.0 | 947 |
| MS.gene28105.t1 | AT4G39800 | 86.497 | 511 | 68 | 1 | 1 | 510 | 1 | 511 | 0.0 | 929 |
| MS.gene28105.t1 | AT2G22240 | 86.667 | 450 | 60 | 0 | 1 | 450 | 1 | 450 | 0.0 | 828 |
| MS.gene28105.t1 | AT2G22240 | 87.632 | 380 | 47 | 0 | 131 | 510 | 1 | 380 | 0.0 | 708 |
Find 142 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGAATTTAAGGGAGTTTA+AGG | 0.097688 | 4.4:-10117607 | MS.gene28105:intron |
| ACAAACAAATGTCCCTAAAT+TGG | 0.138163 | 4.4:-10119698 | MS.gene28105:CDS |
| ACATTATAGTACCCCAATTT+AGG | 0.150535 | 4.4:+10119685 | None:intergenic |
| ATTCAGCAAGCCAATTATTT+TGG | 0.191379 | 4.4:-10118628 | MS.gene28105:CDS |
| AAACTCATATTTGACTGTTT+TGG | 0.228775 | 4.4:+10119726 | None:intergenic |
| AGTTAGCGAACCAAAATAAT+TGG | 0.245511 | 4.4:+10118618 | None:intergenic |
| TGACACTACTGAAAATCTTT+TGG | 0.270475 | 4.4:-10117505 | MS.gene28105:CDS |
| CGTGCTAATAACATAATTAA+AGG | 0.275850 | 4.4:-10117747 | MS.gene28105:CDS |
| AGACCATGTTGTTGTCATTA+AGG | 0.291823 | 4.4:-10116809 | MS.gene28105:intron |
| CAAACAAATGTCCCTAAATT+GGG | 0.324468 | 4.4:-10119697 | MS.gene28105:CDS |
| AGGACCAAGTCCAAGATAAT+TGG | 0.325843 | 4.4:+10116582 | None:intergenic |
| CTTCACTTCACTTGTATTCA+AGG | 0.329578 | 4.4:+10116163 | None:intergenic |
| AATAGTGAGTTACAACCATT+TGG | 0.336347 | 4.4:-10116956 | MS.gene28105:CDS |
| ACCTTCAACCCTCTATGCTT+TGG | 0.341561 | 4.4:-10117451 | MS.gene28105:CDS |
| CACATGTGAAGATTCACTTT+TGG | 0.343814 | 4.4:-10116610 | MS.gene28105:CDS |
| GAATCTATGGTTCCACTTCC+TGG | 0.352749 | 4.4:-10117810 | MS.gene28105:CDS |
| ACCACAAACCTTCCGCTCTA+AGG | 0.355614 | 4.4:-10116905 | MS.gene28105:CDS |
| TTAATTTCAGGGGTATATCT+TGG | 0.355833 | 4.4:-10118666 | MS.gene28105:intron |
| CAGGGTAATGCTTGTTGGGT+GGG | 0.357428 | 4.4:-10119568 | MS.gene28105:CDS |
| TTTGGCTGCTCCAATTATCT+TGG | 0.359211 | 4.4:-10116592 | MS.gene28105:CDS |
| CCTCATGTTCAGATTTGAAC+TGG | 0.361883 | 4.4:+10116535 | None:intergenic |
| CATTATAGTACCCCAATTTA+GGG | 0.361937 | 4.4:+10119686 | None:intergenic |
| AAGGCCATACATGGAATCTA+TGG | 0.367694 | 4.4:-10117823 | MS.gene28105:CDS |
| GTGTTGGTTGATTTCCTTGT+GGG | 0.376334 | 4.4:-10117166 | MS.gene28105:CDS |
| AACAGCAATGCCATCCTCTA+TGG | 0.381819 | 4.4:-10116847 | MS.gene28105:CDS |
| TTCATCAGGGTTGATTGATC+TGG | 0.389212 | 4.4:-10117254 | MS.gene28105:intron |
| TGCTCCAATTATCTTGGACT+TGG | 0.391793 | 4.4:-10116586 | MS.gene28105:CDS |
| CATCCTCAGTTACCTCTCTA+AGG | 0.392661 | 4.4:-10116395 | MS.gene28105:CDS |
| TGATTAGCAGCAATGAAATC+AGG | 0.394949 | 4.4:+10117777 | None:intergenic |
| TAGACCTACAGAAACAATTA+AGG | 0.395631 | 4.4:-10117842 | MS.gene28105:CDS |
| GTTGATTTCCTTGTGGGAGC+TGG | 0.403764 | 4.4:-10117160 | MS.gene28105:CDS |
| GAAAATGTTCCTTTCATCAA+TGG | 0.409621 | 4.4:-10117417 | MS.gene28105:CDS |
| AACCATTTGGGAAACAATGA+TGG | 0.410930 | 4.4:-10116943 | MS.gene28105:CDS |
| TAATTTCAGGGGTATATCTT+GGG | 0.413688 | 4.4:-10118665 | MS.gene28105:intron |
| AATGTTTATCGAGAATTTCA+AGG | 0.417336 | 4.4:-10119863 | MS.gene28105:CDS |
| GAGTAACGTTGTTGATGATA+TGG | 0.424116 | 4.4:-10116872 | MS.gene28105:CDS |
| TTGGAAGAAGGCTCTTGAAT+GGG | 0.425690 | 4.4:+10118545 | None:intergenic |
| TTCCATCATTGTTTCCCAAA+TGG | 0.426194 | 4.4:+10116941 | None:intergenic |
| TCCTTAGAGCGGAAGGTTTG+TGG | 0.427164 | 4.4:+10116904 | None:intergenic |
| GATTTCATTGCTGCTAATCA+AGG | 0.429621 | 4.4:-10117774 | MS.gene28105:CDS |
| ATTGTCAGGGTAATGCTTGT+TGG | 0.429729 | 4.4:-10119573 | MS.gene28105:intron |
| ATCAAAAGGAATAGTTTGAT+TGG | 0.432968 | 4.4:-10117229 | MS.gene28105:CDS |
| TTGTCAGGGTAATGCTTGTT+GGG | 0.436978 | 4.4:-10119572 | MS.gene28105:intron |
| TTTGACAATGCATTCACAAC+TGG | 0.437976 | 4.4:+10116252 | None:intergenic |
| TCTGTTCTCATGAACAAGTT+CGG | 0.440423 | 4.4:+10119777 | None:intergenic |
| AGGACATTGTGTGGGGAGGA+TGG | 0.450002 | 4.4:-10117920 | MS.gene28105:CDS |
| TTAATGACAACAACATGGTC+TGG | 0.452801 | 4.4:+10116811 | None:intergenic |
| ATCATCAACAACGTTACTCT+TGG | 0.458421 | 4.4:+10116876 | None:intergenic |
| TCAAGGATCATGTTGTTCTC+AGG | 0.459581 | 4.4:+10116180 | None:intergenic |
| CCTCCCCACACAATGTCCTC+AGG | 0.463901 | 4.4:+10117924 | None:intergenic |
| TCAGGGTAATGCTTGTTGGG+TGG | 0.469540 | 4.4:-10119569 | MS.gene28105:intron |
| CTGATGCCATGGGCAGAGCT+AGG | 0.472135 | 4.4:-10117875 | MS.gene28105:CDS |
| TTTGCAGTATGTGCCTTATG+TGG | 0.475408 | 4.4:-10116709 | MS.gene28105:intron |
| GGGCATGTATTTCCTCCCCT+TGG | 0.477592 | 4.4:+10118566 | None:intergenic |
| GCCAAAGCATAGAGGGTTGA+AGG | 0.480940 | 4.4:+10117450 | None:intergenic |
| GTCAAAGCAGAGAGCTATGC+TGG | 0.484045 | 4.4:-10116235 | MS.gene28105:CDS |
| GGAACCATAGATTCCATGTA+TGG | 0.485779 | 4.4:+10117819 | None:intergenic |
| AGGGTAATGCTTGTTGGGTG+GGG | 0.488044 | 4.4:-10119567 | MS.gene28105:CDS |
| ATTGGAAGAAGGCTCTTGAA+TGG | 0.495541 | 4.4:+10118544 | None:intergenic |
| GTTGGGTGGGGTGGAAACAA+TGG | 0.495989 | 4.4:-10119555 | MS.gene28105:CDS |
| CCTCAAAACACCTTTGTCCC+AGG | 0.498483 | 4.4:-10117390 | MS.gene28105:intron |
| GTCTCTGTGTACTTCACGTT+AGG | 0.503662 | 4.4:+10119832 | None:intergenic |
| CTCTGCCCATGGCATCAGCT+AGG | 0.505167 | 4.4:+10117880 | None:intergenic |
| GTAATGCTTGTTGGGTGGGG+TGG | 0.506229 | 4.4:-10119564 | MS.gene28105:CDS |
| ATGGCCTTAATTGTTTCTGT+AGG | 0.506495 | 4.4:+10117838 | None:intergenic |
| TATGAGAGCTTGTGTTGGAT+TGG | 0.506967 | 4.4:-10116205 | MS.gene28105:CDS |
| ATAGTGAGTTACAACCATTT+GGG | 0.509679 | 4.4:-10116955 | MS.gene28105:CDS |
| TTGACAAGGTTGTTGTACTC+TGG | 0.509739 | 4.4:-10117572 | MS.gene28105:CDS |
| AACAATGGTTCAACCCTCAC+TGG | 0.512708 | 4.4:-10119540 | MS.gene28105:CDS |
| TGATTGATCTGGCCATCAAA+AGG | 0.517296 | 4.4:-10117243 | MS.gene28105:CDS |
| AAAAGGAATAGTTTGATTGG+TGG | 0.521557 | 4.4:-10117226 | MS.gene28105:CDS |
| ATTCAAGAGCCTTCTTCCAA+TGG | 0.522792 | 4.4:-10118542 | MS.gene28105:intron |
| TGCAATAACACCACCAGTGA+GGG | 0.527477 | 4.4:+10119527 | None:intergenic |
| ATCAGAGTGGGGTCTTTCCA+AGG | 0.531213 | 4.4:-10118583 | MS.gene28105:CDS |
| TGGAAAATAACCTGGGACAA+AGG | 0.532733 | 4.4:+10117380 | None:intergenic |
| GCATTCACAACTGGTGTACC+TGG | 0.532746 | 4.4:+10116261 | None:intergenic |
| ACATGGTCTGGATGTTCACC+AGG | 0.533094 | 4.4:+10116823 | None:intergenic |
| GTACACTTCAGAGATATTCA+TGG | 0.535066 | 4.4:-10116661 | MS.gene28105:CDS |
| AATGCCATCCTCTATGGCCC+TGG | 0.535161 | 4.4:-10116841 | MS.gene28105:CDS |
| GGACATTGTGTGGGGAGGAT+GGG | 0.541581 | 4.4:-10117919 | MS.gene28105:CDS |
| GAAACAATTAAGGCCATACA+TGG | 0.543865 | 4.4:-10117832 | MS.gene28105:CDS |
| GGAGATTTCCTTAGAGCGGA+AGG | 0.545632 | 4.4:+10116897 | None:intergenic |
| GGGTATATCTTGGGCAACAA+AGG | 0.546534 | 4.4:-10118656 | MS.gene28105:CDS |
| TGAGGGCTTCCATTGATGAA+AGG | 0.547926 | 4.4:+10117408 | None:intergenic |
| TGATGCCATGGGCAGAGCTA+GGG | 0.550756 | 4.4:-10117874 | MS.gene28105:CDS |
| AACATTATGAGAGCTTGTGT+TGG | 0.551621 | 4.4:-10116210 | MS.gene28105:CDS |
| AGGTACAGTAATATTGTTGT+GGG | 0.552337 | 4.4:-10117534 | MS.gene28105:CDS |
| CAAGCATCAGCTATCAGAGT+GGG | 0.553091 | 4.4:-10118595 | MS.gene28105:CDS |
| TACAACAACCTTGTCAACCT+TGG | 0.561169 | 4.4:+10117578 | None:intergenic |
| TTGCAGTATGTGCCTTATGT+GGG | 0.570413 | 4.4:-10116708 | MS.gene28105:intron |
| AACACAAGCCAAAGCATAGA+GGG | 0.570612 | 4.4:+10117443 | None:intergenic |
| GACCATATACCATTGGAAGA+AGG | 0.571238 | 4.4:+10118533 | None:intergenic |
| TAGTGCTAAGTTCAGCAAGA+AGG | 0.571347 | 4.4:+10116562 | None:intergenic |
| GGGTCATAGATACCAGGAAG+TGG | 0.573301 | 4.4:+10117798 | None:intergenic |
| CTTAGAGAGGTAACTGAGGA+TGG | 0.576023 | 4.4:+10116396 | None:intergenic |
| GAACACAAGCCAAAGCATAG+AGG | 0.576694 | 4.4:+10117442 | None:intergenic |
| TTCACCAGGGCCATAGAGGA+TGG | 0.577400 | 4.4:+10116837 | None:intergenic |
| GGTTGTTTCGTAACTGTACA+CGG | 0.578811 | 4.4:+10119798 | None:intergenic |
| TCAGAGTGGGGTCTTTCCAA+GGG | 0.579867 | 4.4:-10118582 | MS.gene28105:CDS |
| CTTGAACCTAGCTGATGCCA+TGG | 0.584374 | 4.4:-10117886 | MS.gene28105:CDS |
| TGAGGATGGTTGCAACAGCA+TGG | 0.587792 | 4.4:+10116410 | None:intergenic |
| GGAAACTACCAAGGTTGACA+AGG | 0.587852 | 4.4:-10117586 | MS.gene28105:CDS |
| CTCCCCACACAATGTCCTCA+GGG | 0.593846 | 4.4:+10117925 | None:intergenic |
| TACACTTCAGAGATATTCAT+GGG | 0.596479 | 4.4:-10116660 | MS.gene28105:CDS |
| TTGTAACTCACTATTGATGT+TGG | 0.596496 | 4.4:+10116964 | None:intergenic |
| TGCAGTATGTGCCTTATGTG+GGG | 0.598201 | 4.4:-10116707 | MS.gene28105:intron |
| CCAGTTCAAATCTGAACATG+AGG | 0.602754 | 4.4:-10116535 | MS.gene28105:intron |
| GATTAGCAGCAATGAAATCA+GGG | 0.607120 | 4.4:+10117778 | None:intergenic |
| AAATCAGGGTCATAGATACC+AGG | 0.611731 | 4.4:+10117792 | None:intergenic |
| TTGAACCTAGCTGATGCCAT+GGG | 0.612923 | 4.4:-10117885 | MS.gene28105:CDS |
| AAACCCTGAGGACATTGTGT+GGG | 0.613562 | 4.4:-10117928 | MS.gene28105:CDS |
| GAGGTACAGTAATATTGTTG+TGG | 0.617271 | 4.4:-10117535 | MS.gene28105:CDS |
| CTTTGATACCAGCTCCCACA+AGG | 0.618754 | 4.4:+10117152 | None:intergenic |
| AAACAAATGTCCCTAAATTG+GGG | 0.618805 | 4.4:-10119696 | MS.gene28105:intron |
| TCTTGGAGATTTCCTTAGAG+CGG | 0.619855 | 4.4:+10116893 | None:intergenic |
| AAATTATTACAGGTTCCACC+AGG | 0.620232 | 4.4:-10116279 | MS.gene28105:intron |
| TGGAAGAAGGCTCTTGAATG+GGG | 0.622421 | 4.4:+10118546 | None:intergenic |
| ATTACTGTACCTCTCAGTGT+TGG | 0.631307 | 4.4:+10117545 | None:intergenic |
| TTACAAGTGGAGCCTTAGAG+AGG | 0.632655 | 4.4:+10116383 | None:intergenic |
| GATGTTCACCAGGGCCATAG+AGG | 0.640338 | 4.4:+10116833 | None:intergenic |
| ACAGAAATAACACTTATGAG+TGG | 0.643058 | 4.4:-10119759 | MS.gene28105:CDS |
| AACCCTGAGGACATTGTGTG+GGG | 0.647259 | 4.4:-10117927 | MS.gene28105:CDS |
| TGTGTTGGTTGATTTCCTTG+TGG | 0.647692 | 4.4:-10117167 | MS.gene28105:CDS |
| GGAGTTTAAGGAAACTACCA+AGG | 0.653956 | 4.4:-10117595 | MS.gene28105:CDS |
| TAAACCCTGAGGACATTGTG+TGG | 0.656587 | 4.4:-10117929 | MS.gene28105:CDS |
| CAGAGTGGGGTCTTTCCAAG+GGG | 0.658537 | 4.4:-10118581 | MS.gene28105:CDS |
| AGTGGGGTCTTTCCAAGGGG+AGG | 0.661000 | 4.4:-10118578 | MS.gene28105:CDS |
| AAACACCCTAGCTCTGCCCA+TGG | 0.664245 | 4.4:+10117869 | None:intergenic |
| GAGCCTTAGAGAGGTAACTG+AGG | 0.664939 | 4.4:+10116392 | None:intergenic |
| GGTGGAGATGACTTCAAGAG+TGG | 0.665221 | 4.4:-10117208 | MS.gene28105:CDS |
| TCTGGACTGCCAACACTGAG+AGG | 0.669777 | 4.4:-10117554 | MS.gene28105:CDS |
| AATGGTTCAACCCTCACTGG+TGG | 0.671303 | 4.4:-10119537 | MS.gene28105:CDS |
| TTGCAATAACACCACCAGTG+AGG | 0.674489 | 4.4:+10119526 | None:intergenic |
| GCAGTATGTGCCTTATGTGG+GGG | 0.685589 | 4.4:-10116706 | MS.gene28105:intron |
| TTCACAACTGGTGTACCTGG+TGG | 0.687619 | 4.4:+10116264 | None:intergenic |
| AAGCATCAGCTATCAGAGTG+GGG | 0.693552 | 4.4:-10118594 | MS.gene28105:CDS |
| ACTTCAGAGATATTCATGGG+TGG | 0.695938 | 4.4:-10116657 | MS.gene28105:CDS |
| TCAAGCATCAGCTATCAGAG+TGG | 0.702819 | 4.4:-10118596 | MS.gene28105:CDS |
| CCTGAGGACATTGTGTGGGG+AGG | 0.704840 | 4.4:-10117924 | MS.gene28105:CDS |
| GTACCTTAATGACAACAACA+TGG | 0.735330 | 4.4:+10116806 | None:intergenic |
| AACTCAACAGGTAAACCCTG+AGG | 0.738510 | 4.4:-10117940 | MS.gene28105:intron |
| CATGGTCTGGATGTTCACCA+GGG | 0.754977 | 4.4:+10116824 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACGAAATTAAAATTAATTAA+AGG | + | chr4.4:10118684-10118703 | None:intergenic | 10.0% |
| !! | CGAAATTAAAATTAATTAAA+GGG | + | chr4.4:10118683-10118702 | None:intergenic | 10.0% |
| !! | GAATAAAATAACAAAAATAA+TGG | + | chr4.4:10116558-10116577 | None:intergenic | 10.0% |
| !! | TAATAATTGAATAAACAAAA+TGG | + | chr4.4:10119545-10119564 | None:intergenic | 10.0% |
| !!! | AAATATTTTCCATTTTTAAA+AGG | + | chr4.4:10117739-10117758 | None:intergenic | 10.0% |
| !!! | AATGTATTTTATGAATTTAA+GGG | - | chr4.4:10118416-10118435 | MS.gene28105:intron | 10.0% |
| !!! | AGTACTTTTTTTTTTTTTTT+TGG | - | chr4.4:10118944-10118963 | MS.gene28105:intron | 10.0% |
| !!! | ATATCTATTAATTTTCTATA+AGG | - | chr4.4:10119693-10119712 | MS.gene28105:intron | 10.0% |
| !!! | TAATGTATTTTATGAATTTA+AGG | - | chr4.4:10118415-10118434 | MS.gene28105:intron | 10.0% |
| !! | AAAACACAAATAATAATAGA+AGG | - | chr4.4:10117301-10117320 | MS.gene28105:intron | 15.0% |
| !! | AAATCACAACATATATTAAT+TGG | + | chr4.4:10118720-10118739 | None:intergenic | 15.0% |
| !! | TAAGTTATAAAATGATCATA+GGG | + | chr4.4:10118393-10118412 | None:intergenic | 15.0% |
| !! | TAATTGTTACAAATTATTAC+AGG | - | chr4.4:10119743-10119762 | MS.gene28105:CDS | 15.0% |
| !!! | AATTGATATTTGAATTTTGT+TGG | - | chr4.4:10119031-10119050 | MS.gene28105:intron | 15.0% |
| !!! | ATACTCTTTTGTTAATTAAT+TGG | - | chr4.4:10119293-10119312 | MS.gene28105:intron | 15.0% |
| !!! | ATTATTATTTGTGTTTTTAC+CGG | + | chr4.4:10117298-10117317 | None:intergenic | 15.0% |
| !!! | ATTGATATTTGAATTTTGTT+GGG | - | chr4.4:10119032-10119051 | MS.gene28105:intron | 15.0% |
| !!! | GTAATTTCATTTTTTTTTAG+AGG | - | chr4.4:10118038-10118057 | MS.gene28105:intron | 15.0% |
| !!! | TTCAAATATCCTTTTTAAAT+TGG | + | chr4.4:10117682-10117701 | None:intergenic | 15.0% |
| !! | AATAAAGACAGAATAAAAGT+TGG | + | chr4.4:10119251-10119270 | None:intergenic | 20.0% |
| !! | ATAGAAGGAAATATTTGATA+TGG | - | chr4.4:10117316-10117335 | MS.gene28105:intron | 20.0% |
| !! | GTAAGTTATAAAATGATCAT+AGG | + | chr4.4:10118394-10118413 | None:intergenic | 20.0% |
| !! | TACTTTGAATTGTATTGAAA+AGG | - | chr4.4:10117597-10117616 | MS.gene28105:CDS | 20.0% |
| !! | TTATTATGTTAGCACAAAAA+AGG | - | chr4.4:10119001-10119020 | MS.gene28105:intron | 20.0% |
| !!! | AATATTTGATATGGCAATTT+TGG | - | chr4.4:10117325-10117344 | MS.gene28105:intron | 20.0% |
| !!! | ATATTTGATATGGCAATTTT+GGG | - | chr4.4:10117326-10117345 | MS.gene28105:intron | 20.0% |
| !!! | ATCAATAATTTTTGTGGTTA+TGG | - | chr4.4:10116643-10116662 | MS.gene28105:CDS | 20.0% |
| !!! | ATCATCATCAATAATTTTTG+TGG | - | chr4.4:10116637-10116656 | MS.gene28105:CDS | 20.0% |
| !!! | TATTCTGTCTTTATTTTTGT+TGG | - | chr4.4:10119256-10119275 | MS.gene28105:intron | 20.0% |
| !!! | TTTTCTCAAACTAATAAAAC+AGG | + | chr4.4:10117775-10117794 | None:intergenic | 20.0% |
| !!! | TTTTTATGTTGATATTGTCA+GGG | - | chr4.4:10116446-10116465 | MS.gene28105:intron | 20.0% |
| !!! | TTTTTTATGTTGATATTGTC+AGG | - | chr4.4:10116445-10116464 | MS.gene28105:intron | 20.0% |
| ! | AAATGACTTTCATGAAAGAA+AGG | + | chr4.4:10117525-10117544 | None:intergenic | 25.0% |
| ! | AAATTAATTAAAGGGCAGTT+TGG | + | chr4.4:10118675-10118694 | None:intergenic | 25.0% |
| ! | AATGACTTTCATGAAAGAAA+GGG | + | chr4.4:10117524-10117543 | None:intergenic | 25.0% |
| ! | ACAAAAATTTAAAGAGAGAG+AGG | - | chr4.4:10117123-10117142 | MS.gene28105:intron | 25.0% |
| ! | ATCAAAAGGAATAGTTTGAT+TGG | - | chr4.4:10118803-10118822 | MS.gene28105:intron | 25.0% |
| ! | ATTAAGATGAAACTAACTCT+CGG | + | chr4.4:10116533-10116552 | None:intergenic | 25.0% |
| ! | CAAAAATTTAAAGAGAGAGA+GGG | - | chr4.4:10117124-10117143 | MS.gene28105:intron | 25.0% |
| ! | CATTGTAGAAAGAAAATGTT+TGG | + | chr4.4:10117180-10117199 | None:intergenic | 25.0% |
| ! | CGTGCTAATAACATAATTAA+AGG | - | chr4.4:10118285-10118304 | MS.gene28105:intron | 25.0% |
| ! | TATGAATTTAAGGGAGTTTA+AGG | - | chr4.4:10118425-10118444 | MS.gene28105:intron | 25.0% |
| ! | TGAAATTAAAGTCACAGATA+TGG | + | chr4.4:10117355-10117374 | None:intergenic | 25.0% |
| ! | TTAGATAAAGTAGCACTATT+AGG | + | chr4.4:10118918-10118937 | None:intergenic | 25.0% |
| ! | TTGAATATAGACTCAAAATG+AGG | + | chr4.4:10116379-10116398 | None:intergenic | 25.0% |
| !! | AAACTCATATTTGACTGTTT+TGG | + | chr4.4:10116309-10116328 | None:intergenic | 25.0% |
| !! | AACTCATATTTGACTGTTTT+GGG | + | chr4.4:10116308-10116327 | None:intergenic | 25.0% |
| !! | AATCAAACTATTCCTTTTGA+TGG | + | chr4.4:10118804-10118823 | None:intergenic | 25.0% |
| !! | ACATTTTCTTTCTACAATGA+AGG | - | chr4.4:10117181-10117200 | MS.gene28105:CDS | 25.0% |
| !! | ATATCTGTGACTTTAATTTC+AGG | - | chr4.4:10117354-10117373 | MS.gene28105:intron | 25.0% |
| !! | ATTGAATTTTGCTTGTATGT+TGG | - | chr4.4:10118755-10118774 | MS.gene28105:intron | 25.0% |
| !! | CTCTCTCTTTAAATTTTTGT+TGG | + | chr4.4:10117123-10117142 | None:intergenic | 25.0% |
| !! | TATCTGTGACTTTAATTTCA+GGG | - | chr4.4:10117355-10117374 | MS.gene28105:intron | 25.0% |
| !!! | TATCATTTTGTTTGTATACG+TGG | + | chr4.4:10116739-10116758 | None:intergenic | 25.0% |
| AAAAGGAATAGTTTGATTGG+TGG | - | chr4.4:10118806-10118825 | MS.gene28105:intron | 30.0% | |
| AAACAAATGTCCCTAAATTG+GGG | - | chr4.4:10116336-10116355 | MS.gene28105:intron | 30.0% | |
| AATAGTGAGTTACAACCATT+TGG | - | chr4.4:10119076-10119095 | MS.gene28105:intron | 30.0% | |
| ACAAACAAATGTCCCTAAAT+TGG | - | chr4.4:10116334-10116353 | MS.gene28105:intron | 30.0% | |
| ACAGAAATAACACTTATGAG+TGG | - | chr4.4:10116273-10116292 | MS.gene28105:intron | 30.0% | |
| ACATTATAGTACCCCAATTT+AGG | + | chr4.4:10116350-10116369 | None:intergenic | 30.0% | |
| ACTTGTAAGTCTAATGTAGA+TGG | - | chr4.4:10119664-10119683 | MS.gene28105:intron | 30.0% | |
| AGGTACAGTAATATTGTTGT+GGG | - | chr4.4:10118498-10118517 | MS.gene28105:intron | 30.0% | |
| AGTTAGCGAACCAAAATAAT+TGG | + | chr4.4:10117417-10117436 | None:intergenic | 30.0% | |
| ATAGTGAGTTACAACCATTT+GGG | - | chr4.4:10119077-10119096 | MS.gene28105:intron | 30.0% | |
| ATCTACATTAGACTTACAAG+TGG | + | chr4.4:10119665-10119684 | None:intergenic | 30.0% | |
| ATGTTTAACCTATTTAGCAC+CGG | + | chr4.4:10117219-10117238 | None:intergenic | 30.0% | |
| CAAACAAATGTCCCTAAATT+GGG | - | chr4.4:10116335-10116354 | MS.gene28105:intron | 30.0% | |
| CATTATAGTACCCCAATTTA+GGG | + | chr4.4:10116349-10116368 | None:intergenic | 30.0% | |
| CTGTAAATAAAAACAGCAAC+AGG | + | chr4.4:10119585-10119604 | None:intergenic | 30.0% | |
| GAAAATGTTCCTTTCATCAA+TGG | - | chr4.4:10118615-10118634 | MS.gene28105:CDS | 30.0% | |
| GACTTCTGTACAATTTATCA+TGG | - | chr4.4:10117097-10117116 | MS.gene28105:intron | 30.0% | |
| GTCGCATAACCAATTTAAAA+AGG | - | chr4.4:10117670-10117689 | MS.gene28105:intron | 30.0% | |
| GTGGTTATGGTAAAAATGAA+AGG | - | chr4.4:10116656-10116675 | MS.gene28105:CDS | 30.0% | |
| TACACTTCAGAGATATTCAT+GGG | - | chr4.4:10119372-10119391 | MS.gene28105:intron | 30.0% | |
| TAGACCTACAGAAACAATTA+AGG | - | chr4.4:10118190-10118209 | MS.gene28105:intron | 30.0% | |
| TTAAATTGGTTATGCGACAA+GGG | + | chr4.4:10117668-10117687 | None:intergenic | 30.0% | |
| TTGTAACTCACTATTGATGT+TGG | + | chr4.4:10119071-10119090 | None:intergenic | 30.0% | |
| TTTAAATTGGTTATGCGACA+AGG | + | chr4.4:10117669-10117688 | None:intergenic | 30.0% | |
| ! | ATCTGTGACTTTAATTTCAG+GGG | - | chr4.4:10117356-10117375 | MS.gene28105:intron | 30.0% |
| ! | ATTCAGCAAGCCAATTATTT+TGG | - | chr4.4:10117404-10117423 | MS.gene28105:CDS | 30.0% |
| ! | TAATTTCAGGGGTATATCTT+GGG | - | chr4.4:10117367-10117386 | MS.gene28105:intron | 30.0% |
| ! | TATTTATTCCGGTGCTAAAT+AGG | - | chr4.4:10117208-10117227 | MS.gene28105:CDS | 30.0% |
| ! | TGACACTACTGAAAATCTTT+TGG | - | chr4.4:10118527-10118546 | MS.gene28105:intron | 30.0% |
| ! | TTAATTTCAGGGGTATATCT+TGG | - | chr4.4:10117366-10117385 | MS.gene28105:intron | 30.0% |
| !! | ATGAAGGTGCTTATTTATTC+CGG | - | chr4.4:10117197-10117216 | MS.gene28105:CDS | 30.0% |
| !! | GAGTTCAGTCCTTTTAAAAA+TGG | - | chr4.4:10117727-10117746 | MS.gene28105:CDS | 30.0% |
| !!! | ACAACTTTTTTCTGAAGTGT+TGG | + | chr4.4:10117025-10117044 | None:intergenic | 30.0% |
| !!! | CAACTTTTTTCTGAAGTGTT+GGG | + | chr4.4:10117024-10117043 | None:intergenic | 30.0% |
| !!! | CTGTTGCTGTTTTTATTTAC+AGG | - | chr4.4:10119583-10119602 | MS.gene28105:intron | 30.0% |
| AAATTATTACAGGTTCCACC+AGG | - | chr4.4:10119753-10119772 | MS.gene28105:CDS | 35.0% | |
| AACATTATGAGAGCTTGTGT+TGG | - | chr4.4:10119822-10119841 | MS.gene28105:CDS | 35.0% | |
| AACCATTTGGGAAACAATGA+TGG | - | chr4.4:10119089-10119108 | MS.gene28105:intron | 35.0% | |
| ACACAACAAGAAGTAAGATG+TGG | - | chr4.4:10117899-10117918 | MS.gene28105:CDS | 35.0% | |
| AGACCATGTTGTTGTCATTA+AGG | - | chr4.4:10119223-10119242 | MS.gene28105:intron | 35.0% | |
| ATAGACTCAAAATGAGGAGA+AGG | + | chr4.4:10116373-10116392 | None:intergenic | 35.0% | |
| ATCATCAACAACGTTACTCT+TGG | + | chr4.4:10119159-10119178 | None:intergenic | 35.0% | |
| ATCCACTTAAACACCCAAAA+TGG | + | chr4.4:10116937-10116956 | None:intergenic | 35.0% | |
| GAAACAATTAAGGCCATACA+TGG | - | chr4.4:10118200-10118219 | MS.gene28105:intron | 35.0% | |
| GACAAAAATCAAGTCTGTGT+TGG | - | chr4.4:10118850-10118869 | MS.gene28105:intron | 35.0% | |
| GAGGTACAGTAATATTGTTG+TGG | - | chr4.4:10118497-10118516 | MS.gene28105:intron | 35.0% | |
| GATTAGCAGCAATGAAATCA+GGG | + | chr4.4:10118257-10118276 | None:intergenic | 35.0% | |
| GATTTCATTGCTGCTAATCA+AGG | - | chr4.4:10118258-10118277 | MS.gene28105:intron | 35.0% | |
| GTACACTTCAGAGATATTCA+TGG | - | chr4.4:10119371-10119390 | MS.gene28105:intron | 35.0% | |
| GTACCTTAATGACAACAACA+TGG | + | chr4.4:10119229-10119248 | None:intergenic | 35.0% | |
| TCACTTGTGCAACATAAAAC+CGG | - | chr4.4:10117276-10117295 | MS.gene28105:intron | 35.0% | |
| TCTGTTCTCATGAACAAGTT+CGG | + | chr4.4:10116258-10116277 | None:intergenic | 35.0% | |
| TGATTAGCAGCAATGAAATC+AGG | + | chr4.4:10118258-10118277 | None:intergenic | 35.0% | |
| TTAATGACAACAACATGGTC+TGG | + | chr4.4:10119224-10119243 | None:intergenic | 35.0% | |
| TTCCATCATTGTTTCCCAAA+TGG | + | chr4.4:10119094-10119113 | None:intergenic | 35.0% | |
| TTTGACAATGCATTCACAAC+TGG | + | chr4.4:10119783-10119802 | None:intergenic | 35.0% | |
| ! | AGAATACCTCCTTTTTCTGA+AGG | - | chr4.4:10117704-10117723 | MS.gene28105:intron | 35.0% |
| ! | CACATGTGAAGATTCACTTT+TGG | - | chr4.4:10119422-10119441 | MS.gene28105:intron | 35.0% |
| ! | GAATACCTCCTTTTTCTGAA+GGG | - | chr4.4:10117705-10117724 | MS.gene28105:CDS | 35.0% |
| !! | ATGGCCTTAATTGTTTCTGT+AGG | + | chr4.4:10118197-10118216 | None:intergenic | 35.0% |
| !! | GAGTAACGTTGTTGATGATA+TGG | - | chr4.4:10119160-10119179 | MS.gene28105:intron | 35.0% |
| !! | TGTTTGGTGCTTATAGAGAA+TGG | + | chr4.4:10117164-10117183 | None:intergenic | 35.0% |
| !!! | TGAAAATCTTTTGGCTTCTG+TGG | - | chr4.4:10118536-10118555 | MS.gene28105:intron | 35.0% |
| !!! | TTTTTTCTGAAGTGTTGGGT+TGG | + | chr4.4:10117020-10117039 | None:intergenic | 35.0% |
| AAATCAGGGTCATAGATACC+AGG | + | chr4.4:10118243-10118262 | None:intergenic | 40.0% | |
| AACACAAGCCAAAGCATAGA+GGG | + | chr4.4:10118592-10118611 | None:intergenic | 40.0% | |
| AAGGCCATACATGGAATCTA+TGG | - | chr4.4:10118209-10118228 | MS.gene28105:intron | 40.0% | |
| ACTGAACTCCCTTCAGAAAA+AGG | + | chr4.4:10117716-10117735 | None:intergenic | 40.0% | |
| ACTTCAGAGATATTCATGGG+TGG | - | chr4.4:10119375-10119394 | MS.gene28105:intron | 40.0% | |
| AGAAAGGGACCATATACCAT+TGG | + | chr4.4:10117509-10117528 | None:intergenic | 40.0% | |
| AGCATGTCTTTCAACTCAAC+AGG | - | chr4.4:10118080-10118099 | MS.gene28105:intron | 40.0% | |
| AGCCTTCTTCCAATGGTATA+TGG | - | chr4.4:10117497-10117516 | MS.gene28105:CDS | 40.0% | |
| AGGACCAAGTCCAAGATAAT+TGG | + | chr4.4:10119453-10119472 | None:intergenic | 40.0% | |
| ATTACTGTACCTCTCAGTGT+TGG | + | chr4.4:10118490-10118509 | None:intergenic | 40.0% | |
| ATTCAAGAGCCTTCTTCCAA+TGG | - | chr4.4:10117490-10117509 | MS.gene28105:CDS | 40.0% | |
| ATTGGAAGAAGGCTCTTGAA+TGG | + | chr4.4:10117491-10117510 | None:intergenic | 40.0% | |
| ATTGTCAGGGTAATGCTTGT+TGG | - | chr4.4:10116459-10116478 | MS.gene28105:intron | 40.0% | |
| CCAGTTCAAATCTGAACATG+AGG | - | chr4.4:10119497-10119516 | MS.gene28105:intron | 40.0% | |
| CCTCATGTTCAGATTTGAAC+TGG | + | chr4.4:10119500-10119519 | None:intergenic | 40.0% | |
| GACCATATACCATTGGAAGA+AGG | + | chr4.4:10117502-10117521 | None:intergenic | 40.0% | |
| GGAACCATAGATTCCATGTA+TGG | + | chr4.4:10118216-10118235 | None:intergenic | 40.0% | |
| GGAGTTTAAGGAAACTACCA+AGG | - | chr4.4:10118437-10118456 | MS.gene28105:intron | 40.0% | |
| GGCAGTTTGGAAAATAACCT+GGG | + | chr4.4:10118662-10118681 | None:intergenic | 40.0% | |
| TACAACAACCTTGTCAACCT+TGG | + | chr4.4:10118457-10118476 | None:intergenic | 40.0% | |
| TAGTGCTAAGTTCAGCAAGA+AGG | + | chr4.4:10119473-10119492 | None:intergenic | 40.0% | |
| TATGAGAGCTTGTGTTGGAT+TGG | - | chr4.4:10119827-10119846 | MS.gene28105:CDS | 40.0% | |
| TCAAGGATCATGTTGTTCTC+AGG | + | chr4.4:10119855-10119874 | None:intergenic | 40.0% | |
| TCTTGGAGATTTCCTTAGAG+CGG | + | chr4.4:10119142-10119161 | None:intergenic | 40.0% | |
| TGATTGATCTGGCCATCAAA+AGG | - | chr4.4:10118789-10118808 | MS.gene28105:intron | 40.0% | |
| TGCTCCAATTATCTTGGACT+TGG | - | chr4.4:10119446-10119465 | MS.gene28105:intron | 40.0% | |
| TGGAAAATAACCTGGGACAA+AGG | + | chr4.4:10118655-10118674 | None:intergenic | 40.0% | |
| TTGACAAGGTTGTTGTACTC+TGG | - | chr4.4:10118460-10118479 | MS.gene28105:intron | 40.0% | |
| TTGCAGTATGTGCCTTATGT+GGG | - | chr4.4:10119324-10119343 | MS.gene28105:intron | 40.0% | |
| TTGGAAGAAGGCTCTTGAAT+GGG | + | chr4.4:10117490-10117509 | None:intergenic | 40.0% | |
| TTGTCAGGGTAATGCTTGTT+GGG | - | chr4.4:10116460-10116479 | MS.gene28105:intron | 40.0% | |
| TTTGCAGTATGTGCCTTATG+TGG | - | chr4.4:10119323-10119342 | MS.gene28105:intron | 40.0% | |
| TTTGGCTGCTCCAATTATCT+TGG | - | chr4.4:10119440-10119459 | MS.gene28105:intron | 40.0% | |
| ! | GGTTGTTTCGTAACTGTACA+CGG | + | chr4.4:10116237-10116256 | None:intergenic | 40.0% |
| ! | TTCATCAGGGTTGATTGATC+TGG | - | chr4.4:10118778-10118797 | MS.gene28105:intron | 40.0% |
| ! | TTGGTGCTTATAGAGAATGG+TGG | + | chr4.4:10117161-10117180 | None:intergenic | 40.0% |
| !! | ACAACAGAGCACTCCATTTT+GGG | - | chr4.4:10116921-10116940 | MS.gene28105:CDS | 40.0% |
| !! | CTCCATTTTGGGTGTTTAAG+TGG | - | chr4.4:10116932-10116951 | MS.gene28105:CDS | 40.0% |
| !! | GCTTGTATGTTGGTTCATCA+GGG | - | chr4.4:10118765-10118784 | MS.gene28105:intron | 40.0% |
| !! | GTGTTGGTTGATTTCCTTGT+GGG | - | chr4.4:10118866-10118885 | MS.gene28105:intron | 40.0% |
| !! | TACAACAGAGCACTCCATTT+TGG | - | chr4.4:10116920-10116939 | MS.gene28105:CDS | 40.0% |
| !! | TGCTTGTATGTTGGTTCATC+AGG | - | chr4.4:10118764-10118783 | MS.gene28105:intron | 40.0% |
| !! | TGTGTTGGTTGATTTCCTTG+TGG | - | chr4.4:10118865-10118884 | MS.gene28105:intron | 40.0% |
| AAACCCTGAGGACATTGTGT+GGG | - | chr4.4:10118104-10118123 | MS.gene28105:intron | 45.0% | |
| AACAATGGTTCAACCCTCAC+TGG | - | chr4.4:10116492-10116511 | MS.gene28105:intron | 45.0% | |
| AACAGCAATGCCATCCTCTA+TGG | - | chr4.4:10119185-10119204 | MS.gene28105:intron | 45.0% | |
| AACTCAACAGGTAAACCCTG+AGG | - | chr4.4:10118092-10118111 | MS.gene28105:intron | 45.0% | |
| AAGCATCAGCTATCAGAGTG+GGG | - | chr4.4:10117438-10117457 | MS.gene28105:CDS | 45.0% | |
| ACCTTCAACCCTCTATGCTT+TGG | - | chr4.4:10118581-10118600 | MS.gene28105:CDS | 45.0% | |
| CAAGCATCAGCTATCAGAGT+GGG | - | chr4.4:10117437-10117456 | MS.gene28105:CDS | 45.0% | |
| CATCCTCAGTTACCTCTCTA+AGG | - | chr4.4:10119637-10119656 | MS.gene28105:intron | 45.0% | |
| CTTAGAGAGGTAACTGAGGA+TGG | + | chr4.4:10119639-10119658 | None:intergenic | 45.0% | |
| GAACACAAGCCAAAGCATAG+AGG | + | chr4.4:10118593-10118612 | None:intergenic | 45.0% | |
| GAACTCCCTTCAGAAAAAGG+AGG | + | chr4.4:10117713-10117732 | None:intergenic | 45.0% | |
| GAATCTATGGTTCCACTTCC+TGG | - | chr4.4:10118222-10118241 | MS.gene28105:intron | 45.0% | |
| GGAAACTACCAAGGTTGACA+AGG | - | chr4.4:10118446-10118465 | MS.gene28105:intron | 45.0% | |
| GGGCAGTTTGGAAAATAACC+TGG | + | chr4.4:10118663-10118682 | None:intergenic | 45.0% | |
| GGGTATATCTTGGGCAACAA+AGG | - | chr4.4:10117376-10117395 | MS.gene28105:intron | 45.0% | |
| GTCTCTGTGTACTTCACGTT+AGG | + | chr4.4:10116203-10116222 | None:intergenic | 45.0% | |
| TAAACCCTGAGGACATTGTG+TGG | - | chr4.4:10118103-10118122 | MS.gene28105:intron | 45.0% | |
| TCAAGCATCAGCTATCAGAG+TGG | - | chr4.4:10117436-10117455 | MS.gene28105:CDS | 45.0% | |
| TGAGGGCTTCCATTGATGAA+AGG | + | chr4.4:10118627-10118646 | None:intergenic | 45.0% | |
| TGCAATAACACCACCAGTGA+GGG | + | chr4.4:10116508-10116527 | None:intergenic | 45.0% | |
| TGCAGTATGTGCCTTATGTG+GGG | - | chr4.4:10119325-10119344 | MS.gene28105:intron | 45.0% | |
| TGGAAGAAGGCTCTTGAATG+GGG | + | chr4.4:10117489-10117508 | None:intergenic | 45.0% | |
| TTACAAGTGGAGCCTTAGAG+AGG | + | chr4.4:10119652-10119671 | None:intergenic | 45.0% | |
| TTGAACCTAGCTGATGCCAT+GGG | - | chr4.4:10118147-10118166 | MS.gene28105:intron | 45.0% | |
| TTGCAATAACACCACCAGTG+AGG | + | chr4.4:10116509-10116528 | None:intergenic | 45.0% | |
| ! | ATGGAGTGCTCTGTTGTAGA+TGG | + | chr4.4:10116918-10116937 | None:intergenic | 45.0% |
| !!! | CTGGGACAAAGGTGTTTTGA+GGG | + | chr4.4:10118644-10118663 | None:intergenic | 45.0% |
| AACCCTGAGGACATTGTGTG+GGG | - | chr4.4:10118105-10118124 | MS.gene28105:intron | 50.0% | |
| AATGGTTCAACCCTCACTGG+TGG | - | chr4.4:10116495-10116514 | MS.gene28105:intron | 50.0% | |
| ACATGGTCTGGATGTTCACC+AGG | + | chr4.4:10119212-10119231 | None:intergenic | 50.0% | |
| ACCACAAACCTTCCGCTCTA+AGG | - | chr4.4:10119127-10119146 | MS.gene28105:intron | 50.0% | |
| ATCAGAGTGGGGTCTTTCCA+AGG | - | chr4.4:10117449-10117468 | MS.gene28105:CDS | 50.0% | |
| CATGGTCTGGATGTTCACCA+GGG | + | chr4.4:10119211-10119230 | None:intergenic | 50.0% | |
| CCTCAAAACACCTTTGTCCC+AGG | - | chr4.4:10118642-10118661 | MS.gene28105:CDS | 50.0% | |
| CTTGAACCTAGCTGATGCCA+TGG | - | chr4.4:10118146-10118165 | MS.gene28105:intron | 50.0% | |
| CTTTGATACCAGCTCCCACA+AGG | + | chr4.4:10118883-10118902 | None:intergenic | 50.0% | |
| GAGCCTTAGAGAGGTAACTG+AGG | + | chr4.4:10119643-10119662 | None:intergenic | 50.0% | |
| GCAGTATGTGCCTTATGTGG+GGG | - | chr4.4:10119326-10119345 | MS.gene28105:intron | 50.0% | |
| GCATTCACAACTGGTGTACC+TGG | + | chr4.4:10119774-10119793 | None:intergenic | 50.0% | |
| GCCAAAGCATAGAGGGTTGA+AGG | + | chr4.4:10118585-10118604 | None:intergenic | 50.0% | |
| GGAGATTTCCTTAGAGCGGA+AGG | + | chr4.4:10119138-10119157 | None:intergenic | 50.0% | |
| GGGTCATAGATACCAGGAAG+TGG | + | chr4.4:10118237-10118256 | None:intergenic | 50.0% | |
| GGTGGAGATGACTTCAAGAG+TGG | - | chr4.4:10118824-10118843 | MS.gene28105:intron | 50.0% | |
| GTCAAAGCAGAGAGCTATGC+TGG | - | chr4.4:10119797-10119816 | MS.gene28105:CDS | 50.0% | |
| TCAGAGTGGGGTCTTTCCAA+GGG | - | chr4.4:10117450-10117469 | MS.gene28105:CDS | 50.0% | |
| TCCTTAGAGCGGAAGGTTTG+TGG | + | chr4.4:10119131-10119150 | None:intergenic | 50.0% | |
| TGAGGATGGTTGCAACAGCA+TGG | + | chr4.4:10119625-10119644 | None:intergenic | 50.0% | |
| TTCACAACTGGTGTACCTGG+TGG | + | chr4.4:10119771-10119790 | None:intergenic | 50.0% | |
| ! | AGGGTAATGCTTGTTGGGTG+GGG | - | chr4.4:10116465-10116484 | MS.gene28105:intron | 50.0% |
| ! | CAGGGTAATGCTTGTTGGGT+GGG | - | chr4.4:10116464-10116483 | MS.gene28105:intron | 50.0% |
| ! | GTTGATTTCCTTGTGGGAGC+TGG | - | chr4.4:10118872-10118891 | MS.gene28105:intron | 50.0% |
| ! | TCAGGGTAATGCTTGTTGGG+TGG | - | chr4.4:10116463-10116482 | MS.gene28105:intron | 50.0% |
| !!! | CCTGGGACAAAGGTGTTTTG+AGG | + | chr4.4:10118645-10118664 | None:intergenic | 50.0% |
| AATGCCATCCTCTATGGCCC+TGG | - | chr4.4:10119191-10119210 | MS.gene28105:intron | 55.0% | |
| AGGACATTGTGTGGGGAGGA+TGG | - | chr4.4:10118112-10118131 | MS.gene28105:intron | 55.0% | |
| CAGAGTGGGGTCTTTCCAAG+GGG | - | chr4.4:10117451-10117470 | MS.gene28105:CDS | 55.0% | |
| CTCCCCACACAATGTCCTCA+GGG | + | chr4.4:10118110-10118129 | None:intergenic | 55.0% | |
| GATGTTCACCAGGGCCATAG+AGG | + | chr4.4:10119202-10119221 | None:intergenic | 55.0% | |
| GGACATTGTGTGGGGAGGAT+GGG | - | chr4.4:10118113-10118132 | MS.gene28105:intron | 55.0% | |
| GGGCATGTATTTCCTCCCCT+TGG | + | chr4.4:10117469-10117488 | None:intergenic | 55.0% | |
| GTTGGGTGGGGTGGAAACAA+TGG | - | chr4.4:10116477-10116496 | MS.gene28105:intron | 55.0% | |
| TCTGGACTGCCAACACTGAG+AGG | - | chr4.4:10118478-10118497 | MS.gene28105:intron | 55.0% | |
| TGATGCCATGGGCAGAGCTA+GGG | - | chr4.4:10118158-10118177 | MS.gene28105:intron | 55.0% | |
| TTCACCAGGGCCATAGAGGA+TGG | + | chr4.4:10119198-10119217 | None:intergenic | 55.0% | |
| ! | CTCTTGCTGTCCCCCACATA+AGG | + | chr4.4:10119339-10119358 | None:intergenic | 55.0% |
| ! | GTAATGCTTGTTGGGTGGGG+TGG | - | chr4.4:10116468-10116487 | MS.gene28105:intron | 55.0% |
| !! | AAACACCCTAGCTCTGCCCA+TGG | + | chr4.4:10118166-10118185 | None:intergenic | 55.0% |
| AGTGGGGTCTTTCCAAGGGG+AGG | - | chr4.4:10117454-10117473 | MS.gene28105:CDS | 60.0% | |
| CCTCCCCACACAATGTCCTC+AGG | + | chr4.4:10118111-10118130 | None:intergenic | 60.0% | |
| CCTGAGGACATTGTGTGGGG+AGG | - | chr4.4:10118108-10118127 | MS.gene28105:intron | 60.0% | |
| CTCTGCCCATGGCATCAGCT+AGG | + | chr4.4:10118155-10118174 | None:intergenic | 60.0% | |
| CTGATGCCATGGGCAGAGCT+AGG | - | chr4.4:10118157-10118176 | MS.gene28105:intron | 60.0% | |
| GGGGGACAGCAAGAGAGCAA+TGG | - | chr4.4:10119344-10119363 | MS.gene28105:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 10116170 | 10119884 | 10116170 | ID=MS.gene28105 |
| chr4.4 | mRNA | 10116170 | 10119884 | 10116170 | ID=MS.gene28105.t1;Parent=MS.gene28105 |
| chr4.4 | exon | 10119697 | 10119884 | 10119697 | ID=MS.gene28105.t1.exon1;Parent=MS.gene28105.t1 |
| chr4.4 | CDS | 10119697 | 10119884 | 10119697 | ID=cds.MS.gene28105.t1;Parent=MS.gene28105.t1 |
| chr4.4 | exon | 10119519 | 10119587 | 10119519 | ID=MS.gene28105.t1.exon2;Parent=MS.gene28105.t1 |
| chr4.4 | CDS | 10119519 | 10119587 | 10119519 | ID=cds.MS.gene28105.t1;Parent=MS.gene28105.t1 |
| chr4.4 | exon | 10118543 | 10118678 | 10118543 | ID=MS.gene28105.t1.exon3;Parent=MS.gene28105.t1 |
| chr4.4 | CDS | 10118543 | 10118678 | 10118543 | ID=cds.MS.gene28105.t1;Parent=MS.gene28105.t1 |
| chr4.4 | exon | 10117705 | 10117952 | 10117705 | ID=MS.gene28105.t1.exon4;Parent=MS.gene28105.t1 |
| chr4.4 | CDS | 10117705 | 10117952 | 10117705 | ID=cds.MS.gene28105.t1;Parent=MS.gene28105.t1 |
| chr4.4 | exon | 10117391 | 10117617 | 10117391 | ID=MS.gene28105.t1.exon5;Parent=MS.gene28105.t1 |
| chr4.4 | CDS | 10117391 | 10117617 | 10117391 | ID=cds.MS.gene28105.t1;Parent=MS.gene28105.t1 |
| chr4.4 | exon | 10117153 | 10117268 | 10117153 | ID=MS.gene28105.t1.exon6;Parent=MS.gene28105.t1 |
| chr4.4 | CDS | 10117153 | 10117268 | 10117153 | ID=cds.MS.gene28105.t1;Parent=MS.gene28105.t1 |
| chr4.4 | exon | 10116810 | 10116986 | 10116810 | ID=MS.gene28105.t1.exon7;Parent=MS.gene28105.t1 |
| chr4.4 | CDS | 10116810 | 10116986 | 10116810 | ID=cds.MS.gene28105.t1;Parent=MS.gene28105.t1 |
| chr4.4 | exon | 10116536 | 10116724 | 10116536 | ID=MS.gene28105.t1.exon8;Parent=MS.gene28105.t1 |
| chr4.4 | CDS | 10116536 | 10116724 | 10116536 | ID=cds.MS.gene28105.t1;Parent=MS.gene28105.t1 |
| chr4.4 | exon | 10116387 | 10116449 | 10116387 | ID=MS.gene28105.t1.exon9;Parent=MS.gene28105.t1 |
| chr4.4 | CDS | 10116387 | 10116449 | 10116387 | ID=cds.MS.gene28105.t1;Parent=MS.gene28105.t1 |
| chr4.4 | exon | 10116170 | 10116289 | 10116170 | ID=MS.gene28105.t1.exon10;Parent=MS.gene28105.t1 |
| chr4.4 | CDS | 10116170 | 10116289 | 10116170 | ID=cds.MS.gene28105.t1;Parent=MS.gene28105.t1 |
| Gene Sequence |
| Protein sequence |
