AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene33784

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33784.t1 MTR_4g088920 94.633 913 49 0 1 913 1 913 0.0 1791
MS.gene33784.t1 MTR_5g068600 30.721 804 465 23 33 791 43 799 4.41e-85 290
MS.gene33784.t1 MTR_5g068600 31.454 674 384 18 151 789 67 697 1.17e-77 267
MS.gene33784.t1 MTR_1g045670 30.049 203 130 3 414 605 743 944 8.65e-18 89.4
MS.gene33784.t1 MTR_1g100683 33.858 127 82 2 428 553 799 924 6.45e-15 80.1
MS.gene33784.t1 MTR_1g100683 33.858 127 82 2 428 553 799 924 6.45e-15 80.1
MS.gene33784.t1 MTR_7g109470 25.763 295 169 10 403 665 1003 1279 8.56e-15 79.7
MS.gene33784.t1 MTR_6g086270 26.230 244 148 7 413 630 878 1115 1.83e-13 75.5
MS.gene33784.t1 MTR_4g111945 22.261 283 187 7 414 664 649 930 4.28e-13 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33784.t1 AT1G65070 53.639 893 351 12 28 913 40 876 0.0 902
MS.gene33784.t1 AT1G65070 53.600 875 343 12 28 895 40 858 0.0 878
MS.gene33784.t1 AT1G65070 55.311 772 293 8 28 794 40 764 0.0 816
MS.gene33784.t1 AT1G65070 56.962 632 223 7 28 655 40 626 0.0 692
MS.gene33784.t1 AT5G54090 30.235 807 471 24 20 784 34 790 7.73e-83 284
MS.gene33784.t1 AT3G24320 28.218 202 133 3 415 605 498 698 3.70e-17 87.0
MS.gene33784.t1 AT3G24320 28.218 202 133 3 415 605 743 943 5.29e-17 87.0
MS.gene33784.t1 AT4G25540 32.624 141 92 3 414 552 799 938 1.33e-14 79.0
MS.gene33784.t1 AT4G02070 24.167 360 204 12 203 550 897 1199 1.75e-12 72.4
MS.gene33784.t1 AT4G02070 24.167 360 204 12 203 550 900 1202 1.75e-12 72.4
MS.gene33784.t1 AT3G24495 26.577 222 141 6 412 612 826 1046 3.87e-12 70.9
MS.gene33784.t1 AT3G18524 29.252 147 99 4 414 557 648 792 7.03e-12 70.1
MS.gene33784.t1 AT4G17380 23.651 241 155 7 423 657 545 762 1.24e-11 69.3
MS.gene33784.t1 AT4G17380 28.462 130 92 1 423 552 545 673 1.25e-11 68.9

Find 218 sgRNAs with CRISPR-Local

Find 388 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAATTCATTGGACTTTC+TGG 0.056329 4.3:-24079942 None:intergenic
CTCTGGAGCAACATACTTTA+TGG 0.200265 4.3:+24076420 MS.gene33784:CDS
CTCCGCTCTTGCTGCTGTTC+TGG 0.212629 4.3:-24077645 None:intergenic
AAACCTTGCAACCAACTTAT+AGG 0.224407 4.3:+24077514 MS.gene33784:CDS
GCAAAATTGTAATTTCCTAA+TGG 0.255352 4.3:+24076129 MS.gene33784:CDS
CGAAAAGCAACTAAAAGATT+TGG 0.258652 4.3:+24078350 MS.gene33784:CDS
ACATCATATACTCCACAATT+TGG 0.262844 4.3:+24078483 MS.gene33784:CDS
CTTGTTCTCATTGATGAAAT+TGG 0.280062 4.3:+24077327 MS.gene33784:CDS
ATAGTACCTAAACTGAAAAT+TGG 0.281975 4.3:-24076646 None:intergenic
CCAGAAAGTCCAATGAATTA+TGG 0.282003 4.3:+24079942 MS.gene33784:CDS
GAAGAACACTCGCTGCTTCC+AGG 0.290821 4.3:+24075217 MS.gene33784:CDS
TTGCATAGATTGCAATCTTT+TGG 0.292449 4.3:+24076174 MS.gene33784:CDS
CTAGAATGTGCGTGGGCATC+AGG 0.296994 4.3:+24076347 MS.gene33784:CDS
ATTCTCTCCGTTGCTGTTTC+CGG 0.310263 4.3:+24075159 MS.gene33784:CDS
GACCTTATCCTTGCAGATAT+TGG 0.312231 4.3:+24077057 MS.gene33784:CDS
AGCAATGGTGATATTTATTA+TGG 0.313667 4.3:+24079720 MS.gene33784:CDS
CAAAATTGTAATTTCCTAAT+GGG 0.314744 4.3:+24076130 MS.gene33784:CDS
TTGCATCCTCTAACTCTTGT+TGG 0.316694 4.3:-24078296 None:intergenic
TTCAAATCTATTGCTTCTTT+CGG 0.318025 4.3:-24076445 None:intergenic
AGGTCAAACCAAGGAAGTTT+TGG 0.325111 4.3:-24077039 None:intergenic
AACCTTGCAACCAACTTATA+GGG 0.326348 4.3:+24077515 MS.gene33784:CDS
TCATTAGATCAGAACGAAAA+AGG 0.327607 4.3:+24076230 MS.gene33784:CDS
CTTGGCAGGCAGATGCATTC+CGG 0.328681 4.3:-24077010 None:intergenic
AGGTTTGATCGAGAAGCTTT+TGG 0.334460 4.3:-24075074 None:intergenic
AGGGATTGAGGGTTTGTTGA+TGG 0.339868 4.3:-24074869 None:intergenic
TTCTTAGATGTTTGCACCGC+TGG 0.347990 4.3:-24079744 None:intergenic
GATCGACGCTTAGTAATAAA+TGG 0.355822 4.3:-24076325 None:intergenic
ACGGGCGCTGTTGGCGGCGG+AGG 0.366945 4.3:-24075022 None:intergenic
GGGATTGAGGGTTTGTTGAT+GGG 0.370731 4.3:-24074868 None:intergenic
GAAAAGCAACTAAAAGATTT+GGG 0.371137 4.3:+24078351 MS.gene33784:CDS
AGCATTCACTTCCACTTCAA+TGG 0.372505 4.3:+24074996 MS.gene33784:CDS
ATCAGAGATAAAATATTTGT+TGG 0.373046 4.3:+24076555 MS.gene33784:CDS
AAGGAGAAGCGAGGGATTGA+GGG 0.374390 4.3:-24074880 None:intergenic
TCTGAGTTGGGTAATGGAAA+TGG 0.381561 4.3:+24076823 MS.gene33784:CDS
GAGTACGTCCGACGGGTAAA+CGG 0.383430 4.3:-24075041 None:intergenic
ATTACAAAGAGAACTGAATA+TGG 0.386756 4.3:-24079840 None:intergenic
AACTAGTTCTCCCACTCATC+AGG 0.387558 4.3:+24078662 MS.gene33784:CDS
CAAGGTCTTCTGCCTCCCTT+TGG 0.387704 4.3:-24078230 None:intergenic
AGGGTTCTCTGGGGATGTAT+TGG 0.387828 4.3:+24077534 MS.gene33784:CDS
GTTCTGAATGCCAGCAGCTC+TGG 0.388227 4.3:+24076403 MS.gene33784:CDS
AACCAACTTATAGGGTTCTC+TGG 0.388468 4.3:+24077523 MS.gene33784:CDS
GTAATACATGGGATGGGCAC+TGG 0.389103 4.3:+24079858 MS.gene33784:CDS
TTGTAATTTCCTAATGGGCT+TGG 0.389277 4.3:+24076135 MS.gene33784:CDS
GAAACAATCTTGGTACAGTA+TGG 0.389406 4.3:+24078573 MS.gene33784:CDS
TTAAGCATAGCGCAATCTAT+TGG 0.392431 4.3:+24077570 MS.gene33784:CDS
AATTCTTCTGAGTTGGGTAA+TGG 0.397648 4.3:+24076817 MS.gene33784:CDS
TCCTAATGGGCTTGGAGCGC+AGG 0.398236 4.3:+24076143 MS.gene33784:CDS
GAAGGAGAAGCGAGGGATTG+AGG 0.404110 4.3:-24074881 None:intergenic
AATGCTCTATCAGTCATTAC+AGG 0.405453 4.3:+24077671 MS.gene33784:CDS
GTTCATAATTTCTGCATGAA+TGG 0.405550 4.3:-24077736 None:intergenic
CAAGTCCGTGTGAAGGGATT+GGG 0.412733 4.3:+24078510 MS.gene33784:CDS
GTCATCTCAGGACCTAATAC+TGG 0.416951 4.3:+24076934 MS.gene33784:CDS
GTTGACTTCAAAATTAGATC+TGG 0.420665 4.3:+24076898 MS.gene33784:CDS
TGCTGATCTAAGTACTTTGA+AGG 0.425952 4.3:+24077446 MS.gene33784:CDS
TCAGTTCTCTTTGTAATACA+TGG 0.427691 4.3:+24079846 MS.gene33784:CDS
ATTTGAACAACATGGAAGTT+AGG 0.428354 4.3:+24076461 MS.gene33784:CDS
GGGTAAACGGGCGCTGTTGG+CGG 0.429602 4.3:-24075028 None:intergenic
ACTAGAGTGGTGGTCATCTC+AGG 0.432380 4.3:+24076922 MS.gene33784:CDS
TAATACATGGGATGGGCACT+GGG 0.432402 4.3:+24079859 MS.gene33784:CDS
GTCTGGAAATTCTTCTGAGT+TGG 0.433211 4.3:+24076810 MS.gene33784:CDS
GTAGCAGAAGCAAGGTTTGA+AGG 0.434423 4.3:-24074899 None:intergenic
CTTCGAACGGTGCAAAGCTC+GGG 0.437748 4.3:-24075198 None:intergenic
GCATTCAGAACTATACCTTC+TGG 0.438902 4.3:-24076391 None:intergenic
TCCTGCGCTCCAAGCCCATT+AGG 0.439036 4.3:-24076144 None:intergenic
TCTGGAAATTCTTCTGAGTT+GGG 0.439306 4.3:+24076811 MS.gene33784:CDS
GCCTATGCTCAATGGATGAA+TGG 0.441853 4.3:+24076616 MS.gene33784:CDS
GCAAGTCCGTGTGAAGGGAT+TGG 0.444020 4.3:+24078509 MS.gene33784:CDS
TGAGTGGGAGAACTAGTTGC+AGG 0.444981 4.3:-24078657 None:intergenic
CTCCAATATCTGCAAGGATA+AGG 0.447195 4.3:-24077059 None:intergenic
ACGGGTCCAACAAGAGTTAG+AGG 0.448882 4.3:+24078290 MS.gene33784:CDS
TGCTGAGAGTTGCTTGCATA+TGG 0.449310 4.3:-24074977 None:intergenic
CCTATGCTCAATGGATGAAT+GGG 0.451608 4.3:+24076617 MS.gene33784:CDS
ACAGTACATCCATAATTCAT+TGG 0.451719 4.3:-24079951 None:intergenic
TATGGCAAAGGAAGCTCAAC+GGG 0.452879 4.3:+24078272 MS.gene33784:CDS
AGAAAAGTCCAAAACTTCCT+TGG 0.454680 4.3:+24077031 MS.gene33784:CDS
GCATTCACTTCCACTTCAAT+GGG 0.457389 4.3:+24074997 MS.gene33784:CDS
TAAACGGGCGCTGTTGGCGG+CGG 0.458599 4.3:-24075025 None:intergenic
AATCCTGGACTCTTTATTGA+AGG 0.459366 4.3:+24076261 MS.gene33784:CDS
TAGACGTGAAACGATGCTTA+TGG 0.459950 4.3:+24078254 MS.gene33784:CDS
CTTTAATTATTGAATTGAGT+TGG 0.464631 4.3:-24078380 None:intergenic
GTTAAAGGCTCAAGCTGAAA+AGG 0.465641 4.3:+24077707 MS.gene33784:CDS
TTCAAACTCTGAAGCGGCCG+AGG 0.466077 4.3:+24076486 MS.gene33784:CDS
ACCAACTTATAGGGTTCTCT+GGG 0.467907 4.3:+24077524 MS.gene33784:CDS
TTCAATGAAAACGTTGGGCC+TGG 0.468162 4.3:+24076969 MS.gene33784:CDS
GGATTGAGGGTTTGTTGATG+GGG 0.474954 4.3:-24074867 None:intergenic
GCAGGATTCTTTGCACTTGG+TGG 0.477236 4.3:-24078639 None:intergenic
AGTACGTCCGACGGGTAAAC+GGG 0.478043 4.3:-24075040 None:intergenic
CCGCAGATATTGTAAGATAC+TGG 0.478412 4.3:-24077388 None:intergenic
GTATGTTGCTCCAGAGCTGC+TGG 0.478675 4.3:-24076413 None:intergenic
GCCACAGTGGTAGAATTGCC+TGG 0.478854 4.3:+24078543 MS.gene33784:CDS
CAATGACATTGCGGTCGTGC+AGG 0.479424 4.3:+24076696 MS.gene33784:CDS
CTCATTGATGAAATTGGTAG+TGG 0.480474 4.3:+24077333 MS.gene33784:CDS
AGAGGATGCAAAATCTCAAA+TGG 0.483805 4.3:+24078308 MS.gene33784:CDS
ATCTAAGTACTTTGAAGGAA+AGG 0.486923 4.3:+24077451 MS.gene33784:CDS
GACGGGTAAACGGGCGCTGT+TGG 0.491238 4.3:-24075031 None:intergenic
TCTAAGTACTTTGAAGGAAA+GGG 0.492540 4.3:+24077452 MS.gene33784:CDS
GATAATGTCACACTAAGGTC+TGG 0.494415 4.3:+24076793 MS.gene33784:CDS
ACTGCTTCAATGAAAACGTT+GGG 0.494465 4.3:+24076964 MS.gene33784:CDS
CAAGAGCTGCCTATGCTCAA+TGG 0.496220 4.3:+24076608 MS.gene33784:CDS
TCTTCGAACGGTGCAAAGCT+CGG 0.496479 4.3:-24075199 None:intergenic
GTTGCAGGATTCTTTGCACT+TGG 0.499764 4.3:-24078642 None:intergenic
GATGGGGATGAAGAGGTTGC+AGG 0.501851 4.3:-24074851 None:intergenic
CTATTGTAGAAACCACTGAA+TGG 0.501864 4.3:+24079666 MS.gene33784:intron
GTTTGATAGTTTGAAACACT+TGG 0.502558 4.3:+24075245 MS.gene33784:CDS
CGATTTAACAGTAAATATTG+AGG 0.507073 4.3:+24076723 MS.gene33784:CDS
ACCTGCTTTCCCTGATGAGT+GGG 0.510949 4.3:-24078672 None:intergenic
TCTCTTTGTAATACATGGGA+TGG 0.512107 4.3:+24079851 MS.gene33784:CDS
TATGCGGCATCCATTACTCC+TGG 0.512692 4.3:+24076747 MS.gene33784:CDS
CGCTGATTGTCATCTCAAGA+TGG 0.514272 4.3:-24079809 None:intergenic
ACCACTGAATGGAAAATCCC+GGG 0.517125 4.3:+24079677 MS.gene33784:CDS
ATGCGATCAGCGCCACTGAT+GGG 0.523837 4.3:-24078459 None:intergenic
AACCCTATAAGTTGGTTGCA+AGG 0.524314 4.3:-24077517 None:intergenic
GCATCGTTTCACGTCTATCA+AGG 0.526470 4.3:-24078248 None:intergenic
CCACAGTGGTAGAATTGCCT+GGG 0.526487 4.3:+24078544 MS.gene33784:CDS
CAAACTATCAAACAATTCCC+TGG 0.528874 4.3:-24075235 None:intergenic
TCCCACTCATCAGGGAAAGC+AGG 0.529174 4.3:+24078671 MS.gene33784:CDS
TTCAGTTTAGGTACTATTGG+AGG 0.531767 4.3:+24076652 MS.gene33784:CDS
GTTCTGATCTAATGATCTCC+AGG 0.531958 4.3:-24076222 None:intergenic
ACTCAAAATTGCTCTTTCCT+CGG 0.533024 4.3:-24076503 None:intergenic
AACCACTGAATGGAAAATCC+CGG 0.535658 4.3:+24079676 MS.gene33784:CDS
CTTCCTTCAATAAAGAGTCC+AGG 0.535939 4.3:-24076264 None:intergenic
CAGTTCTCTTTGTAATACAT+GGG 0.538091 4.3:+24079847 MS.gene33784:CDS
TGGGCATCAGGGCTTCGTAT+AGG 0.539792 4.3:+24076359 MS.gene33784:CDS
GTTTGTTGATGGGGATGAAG+AGG 0.545453 4.3:-24074858 None:intergenic
TAATTGACCATGCACAAAAG+TGG 0.545555 4.3:+24077607 MS.gene33784:CDS
GGATTGGACTGAGTTGGACT+CGG 0.547239 4.3:-24074926 None:intergenic
GGAGAGCAAGTCCGTGTGAA+GGG 0.549755 4.3:+24078504 MS.gene33784:CDS
CCCCAGAGAACCCTATAAGT+TGG 0.550494 4.3:-24077525 None:intergenic
AAGGTTTGAAGGAGAAGCGA+GGG 0.550811 4.3:-24074888 None:intergenic
TTGTTGTTGAGGAATGAGTC+TGG 0.550825 4.3:-24075103 None:intergenic
CGGACTTGCTCTCCAAATTG+TGG 0.554429 4.3:-24078495 None:intergenic
TGGGGATGATGAAACAATCT+TGG 0.554483 4.3:+24078563 MS.gene33784:CDS
GTTCATCTCTAAGTTACCCC+GGG 0.556248 4.3:-24079694 None:intergenic
TCTGCGGGAACATGTTAACT+TGG 0.556527 4.3:+24077404 MS.gene33784:CDS
GTCTGTTGGAGTACGTCCGA+CGG 0.557543 4.3:-24075049 None:intergenic
AGAGACGACTCCAGGAGTAA+TGG 0.558135 4.3:-24076757 None:intergenic
AAGAACACTCGCTGCTTCCA+GGG 0.558472 4.3:+24075218 MS.gene33784:CDS
AACCAGAACAGCAGCAAGAG+CGG 0.560885 4.3:+24077643 MS.gene33784:CDS
AGGTTGCAGGTGAGTTGCAT+CGG 0.562147 4.3:-24074838 None:intergenic
GATTTAACAGTAAATATTGA+GGG 0.563255 4.3:+24076724 MS.gene33784:CDS
TATAGGTATTTGCTTCCAGA+AGG 0.564358 4.3:+24076376 MS.gene33784:CDS
TGCAGATATTGGAGATCACC+AGG 0.564613 4.3:+24077068 MS.gene33784:CDS
TCTGTTGGAGTACGTCCGAC+GGG 0.568179 4.3:-24075048 None:intergenic
TGATAGAGCAAGTGAAGACC+TGG 0.568238 4.3:+24076204 MS.gene33784:CDS
CTCTTTGTAATACATGGGAT+GGG 0.569356 4.3:+24079852 MS.gene33784:CDS
AGGTTGCAATTCTGTTGAAG+AGG 0.570911 4.3:+24076672 MS.gene33784:CDS
GCATCACTTATGTCAAAAGC+CGG 0.571118 4.3:+24076991 MS.gene33784:CDS
AACTGATCCTTCAGAAGGTG+TGG 0.571658 4.3:+24077356 MS.gene33784:CDS
CAGTATCTTACAATATCTGC+GGG 0.572845 4.3:+24077389 MS.gene33784:CDS
ATAGCCTCAAAACTCTCGAA+TGG 0.578502 4.3:+24074950 MS.gene33784:CDS
AGGAATGAGTCTGGCAGCGG+AGG 0.579503 4.3:-24075094 None:intergenic
TTCCTCCCAATCCCTTCACA+CGG 0.581458 4.3:-24078515 None:intergenic
GCCACTGATGGGAGAACCAA+CGG 0.582829 4.3:-24078448 None:intergenic
AAGATTGTTTCATCATCCCC+AGG 0.584283 4.3:-24078561 None:intergenic
AACTGCTTCAATGAAAACGT+TGG 0.585712 4.3:+24076963 MS.gene33784:CDS
TGGAGAGCAAGTCCGTGTGA+AGG 0.586036 4.3:+24078503 MS.gene33784:CDS
TGAAACGATGCTTATGGCAA+AGG 0.587621 4.3:+24078260 MS.gene33784:CDS
TTAGAGATGAACAGCAGCAA+TGG 0.589819 4.3:+24079705 MS.gene33784:CDS
TGTTCATCTCTAAGTTACCC+CGG 0.590270 4.3:-24079695 None:intergenic
GCTATCGGATTGGACTGAGT+TGG 0.590319 4.3:-24074932 None:intergenic
ACTAGTTCTCCCACTCATCA+GGG 0.590763 4.3:+24078663 MS.gene33784:CDS
TTGAGGAATGAGTCTGGCAG+CGG 0.591996 4.3:-24075097 None:intergenic
GCCGTTGGTTCTCCCATCAG+TGG 0.592897 4.3:+24078447 MS.gene33784:CDS
TTTCAGATAATGTCACACTA+AGG 0.593354 4.3:+24076788 MS.gene33784:CDS
TACCTGCTTTCCCTGATGAG+TGG 0.594282 4.3:-24078673 None:intergenic
TAGAATGTGCGTGGGCATCA+GGG 0.594705 4.3:+24076348 MS.gene33784:CDS
GGCGGAGGAGCCCATTGAAG+TGG 0.595273 4.3:-24075007 None:intergenic
AATGCGATCAGCGCCACTGA+TGG 0.596091 4.3:-24078460 None:intergenic
GCGTCGATCTAGAATGTGCG+TGG 0.598379 4.3:+24076339 MS.gene33784:CDS
AATTGACCATGCACAAAAGT+GGG 0.600519 4.3:+24077608 MS.gene33784:CDS
TAGGCTTTCAAACTCTGAAG+CGG 0.601365 4.3:+24076480 MS.gene33784:CDS
ATCTCAGGACCTAATACTGG+AGG 0.603222 4.3:+24076937 MS.gene33784:CDS
GAAAGAGCCACACCTTCTGA+AGG 0.603440 4.3:-24077363 None:intergenic
CTGTATCTAATCATTCACAC+AGG 0.610846 4.3:+24075271 MS.gene33784:CDS
AGCAATAGATTTGAACAACA+TGG 0.612310 4.3:+24076453 MS.gene33784:CDS
GTCCGTGTGAAGGGATTGGG+AGG 0.612668 4.3:+24078513 MS.gene33784:CDS
CCAGTATCTTACAATATCTG+CGG 0.612724 4.3:+24077388 MS.gene33784:CDS
TCGGTTGAGTAGCAGAAGCA+AGG 0.613416 4.3:-24074907 None:intergenic
GGATCTACGAGGTATGCGAC+TGG 0.616506 4.3:+24079773 MS.gene33784:CDS
GCTTCTAAAAGCGCGTCACA+AGG 0.619119 4.3:+24076853 MS.gene33784:CDS
AATTAGATCTGGAACTAGAG+TGG 0.621351 4.3:+24076909 MS.gene33784:CDS
AACAGCGCCCGTTTACCCGT+CGG 0.621694 4.3:+24075033 MS.gene33784:CDS
CCCATTCATCCATTGAGCAT+AGG 0.623957 4.3:-24076617 None:intergenic
AAAGCTCATACTCCTGCCGT+TGG 0.625973 4.3:+24078432 MS.gene33784:CDS
CAGTAAATATTGAGGGTATG+CGG 0.626418 4.3:+24076731 MS.gene33784:CDS
TTATGGCAAAGGAAGCTCAA+CGG 0.627066 4.3:+24078271 MS.gene33784:CDS
GGGAATAGTCAACAAACTAC+CGG 0.627765 4.3:-24075178 None:intergenic
AGTGGAACTGATCCTTCAGA+AGG 0.631076 4.3:+24077351 MS.gene33784:CDS
CAAGGTTTGAAGGAGAAGCG+AGG 0.631968 4.3:-24074889 None:intergenic
GAAAAGTCGAGTTGTTGTTG+AGG 0.632731 4.3:-24075114 None:intergenic
AGCAGCGAGTGTTCTTCGAA+CGG 0.642225 4.3:-24075211 None:intergenic
CTGATGGGAGAACCAACGGC+AGG 0.643450 4.3:-24078444 None:intergenic
GGTGATCTCCAATATCTGCA+AGG 0.644964 4.3:-24077065 None:intergenic
TTCCAGTGAAAATTCCATTG+CGG 0.649211 4.3:-24077493 None:intergenic
CGTCGATCTAGAATGTGCGT+GGG 0.653354 4.3:+24076340 MS.gene33784:CDS
TGACCATGCACAAAAGTGGG+TGG 0.654188 4.3:+24077611 MS.gene33784:CDS
GGGTAATGGAAATGGAACAA+TGG 0.655085 4.3:+24076831 MS.gene33784:CDS
CAAACTACCGGAAACAGCAA+CGG 0.655170 4.3:-24075166 None:intergenic
GAACAGCAGCAAGAGCGGAG+AGG 0.655853 4.3:+24077648 MS.gene33784:CDS
GCAAACATCTAAGAATACTG+TGG 0.660918 4.3:+24079752 MS.gene33784:CDS
GCTCTATCAGTCATTACAGG+AGG 0.665919 4.3:+24077674 MS.gene33784:CDS
TCTCAGGACCTAATACTGGA+GGG 0.667789 4.3:+24076938 MS.gene33784:CDS
CTGTTGCACGTGTTAAGTGA+AGG 0.669861 4.3:+24079970 MS.gene33784:CDS
TAGATCTGGAACTAGAGTGG+TGG 0.673809 4.3:+24076912 MS.gene33784:CDS
ACTTAGATCAGCATAATGAG+TGG 0.681388 4.3:-24077436 None:intergenic
CTATGCTCAATGGATGAATG+GGG 0.683732 4.3:+24076618 MS.gene33784:CDS
CACAGTGGTAGAATTGCCTG+GGG 0.691114 4.3:+24078545 MS.gene33784:CDS
TGATATTTATTATGGTCCAG+CGG 0.693969 4.3:+24079728 MS.gene33784:CDS
AATTATGAACGTGTACTCTG+AGG 0.698166 4.3:+24077749 MS.gene33784:CDS
AATACATGGGATGGGCACTG+GGG 0.701367 4.3:+24079860 MS.gene33784:CDS
TGAAGAGGACAATGACATTG+CGG 0.707528 4.3:+24076687 MS.gene33784:CDS
CCCAGGCAATTCTACCACTG+TGG 0.714085 4.3:-24078544 None:intergenic
GGGAGGAAAATTAGCCACAG+TGG 0.714859 4.3:+24078530 MS.gene33784:CDS
GCAAGGATAAGGTCAAACCA+AGG 0.720894 4.3:-24077048 None:intergenic
CCACTGAATGGAAAATCCCG+GGG 0.744139 4.3:+24079678 MS.gene33784:CDS
AAGAATACTGTGGATCTACG+AGG 0.748281 4.3:+24079762 MS.gene33784:CDS
GGTTCAAAATGAGTGACACG+AGG 0.753470 4.3:-24079921 None:intergenic
CCAACTTATAGGGTTCTCTG+GGG 0.797932 4.3:+24077525 MS.gene33784:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAGAATTGATATATTT+TGG + chr4.3:24079109-24079128 MS.gene33784:intron 10.0%
!! AAATACCTTTCAATAAAATT+TGG - chr4.3:24079045-24079064 None:intergenic 15.0%
!! AATTTCAGATAAACTTTAAA+AGG - chr4.3:24077867-24077886 None:intergenic 15.0%
!! ATAATGATTATCATACTATA+TGG - chr4.3:24077840-24077859 None:intergenic 15.0%
!! ATATAAGTAAAAGAAGTTAT+TGG + chr4.3:24079009-24079028 MS.gene33784:intron 15.0%
!! ATATATATATATATGTCATG+TGG + chr4.3:24077178-24077197 MS.gene33784:intron 15.0%
!!! AAGGTATTTTATATTTAATC+TGG + chr4.3:24079056-24079075 MS.gene33784:intron 15.0%
!!! AATTTTGTCTAAATCAAATT+AGG - chr4.3:24079529-24079548 None:intergenic 15.0%
!!! ATTTCAGATAAACTTTAAAA+GGG - chr4.3:24077866-24077885 None:intergenic 15.0%
!!! TTACTATTTTAGTAAGAATT+GGG + chr4.3:24079226-24079245 MS.gene33784:intron 15.0%
!! AAATAAAAGGAAACAGTTTA+TGG + chr4.3:24075491-24075510 MS.gene33784:intron 20.0%
!! AATAAAAGGAAACAGTTTAT+GGG + chr4.3:24075492-24075511 MS.gene33784:intron 20.0%
!! ATATTTAAATTAACAGCTCT+TGG - chr4.3:24078017-24078036 None:intergenic 20.0%
!! ATCAGAGATAAAATATTTGT+TGG + chr4.3:24076555-24076574 MS.gene33784:CDS 20.0%
!! CAAAATTGTAATTTCCTAAT+GGG + chr4.3:24076130-24076149 MS.gene33784:CDS 20.0%
!! CTTTAATTATTGAATTGAGT+TGG - chr4.3:24078383-24078402 None:intergenic 20.0%
!! GATTTAACAGTAAATATTGA+GGG + chr4.3:24076724-24076743 MS.gene33784:CDS 20.0%
!! TTGCAAAATAACTTTCTTAA+TGG - chr4.3:24078789-24078808 None:intergenic 20.0%
!!! ATTATCTAAAATATTCTTCG+TGG + chr4.3:24078975-24078994 MS.gene33784:intron 20.0%
!!! ATTTTTGTGAACTTTTACTT+TGG - chr4.3:24076055-24076074 None:intergenic 20.0%
!!! CATTTTTTCTTTTGAAGTAA+TGG + chr4.3:24079079-24079098 MS.gene33784:intron 20.0%
!!! CTTATTATATTTGAAACTAG+AGG - chr4.3:24078876-24078895 None:intergenic 20.0%
!!! GAAATCCAAATTTTATTGAA+AGG + chr4.3:24079037-24079056 MS.gene33784:intron 20.0%
!!! GTTACTATTTTAGTAAGAAT+TGG + chr4.3:24079225-24079244 MS.gene33784:intron 20.0%
!!! TACTATTTTAGTAAGAATTG+GGG + chr4.3:24079227-24079246 MS.gene33784:intron 20.0%
!!! TTAAGAAGCCAATTTTAAAA+AGG - chr4.3:24079506-24079525 None:intergenic 20.0%
!!! TTTTACTTTGGATTTGTAAA+AGG - chr4.3:24076043-24076062 None:intergenic 20.0%
! AAAAAAGTTCAGATATTACC+TGG - chr4.3:24077089-24077108 None:intergenic 25.0%
! AAATAGTAACAAATACTCTC+CGG - chr4.3:24079215-24079234 None:intergenic 25.0%
! AGCAATGGTGATATTTATTA+TGG + chr4.3:24079720-24079739 MS.gene33784:CDS 25.0%
! ATAGTACCTAAACTGAAAAT+TGG - chr4.3:24076649-24076668 None:intergenic 25.0%
! ATTAATAGATATCCAATCCT+CGG + chr4.3:24077985-24078004 MS.gene33784:intron 25.0%
! ATTACAAAGAGAACTGAATA+TGG - chr4.3:24079843-24079862 None:intergenic 25.0%
! ATTCAATGTGCCTATATTAT+AGG - chr4.3:24079456-24079475 None:intergenic 25.0%
! CAATTTCCAAATATGATGTT+AGG - chr4.3:24079419-24079438 None:intergenic 25.0%
! CGATTTAACAGTAAATATTG+AGG + chr4.3:24076723-24076742 MS.gene33784:CDS 25.0%
! CTAACATCATATTTGGAAAT+TGG + chr4.3:24079417-24079436 MS.gene33784:intron 25.0%
! GAAAAGCAACTAAAAGATTT+GGG + chr4.3:24078351-24078370 MS.gene33784:CDS 25.0%
! GCAAAATTGTAATTTCCTAA+TGG + chr4.3:24076129-24076148 MS.gene33784:CDS 25.0%
! GGTATTTATTACAGAAAAAC+AGG - chr4.3:24079391-24079410 None:intergenic 25.0%
! GTTGTTCTATCATGTAATTT+GGG + chr4.3:24079271-24079290 MS.gene33784:intron 25.0%
! TTAATATAGTTAACCTGTCA+AGG + chr4.3:24078739-24078758 MS.gene33784:intron 25.0%
! TTATTATAGTTTCTTCTCCT+TGG + chr4.3:24077813-24077832 MS.gene33784:intron 25.0%
! TTCAAATCTATTGCTTCTTT+CGG - chr4.3:24076448-24076467 None:intergenic 25.0%
! TTCAGATCATCCTATAATAT+AGG + chr4.3:24079443-24079462 MS.gene33784:intron 25.0%
! TTTCAGACATTTCTAATTGA+TGG + chr4.3:24075606-24075625 MS.gene33784:intron 25.0%
!! AAAATCTCTCAACTTTTAGT+GGG + chr4.3:24077256-24077275 MS.gene33784:CDS 25.0%
!! AATTTTGCAGTATTTCAAGA+AGG - chr4.3:24076117-24076136 None:intergenic 25.0%
!! ATTTTCAGTTTAGGTACTAT+TGG + chr4.3:24076649-24076668 MS.gene33784:CDS 25.0%
!! ATTTTGCAGTATTTCAAGAA+GGG - chr4.3:24076116-24076135 None:intergenic 25.0%
!! GTATTTTTCTTGACAAAGTT+CGG + chr4.3:24075922-24075941 MS.gene33784:intron 25.0%
!! GTTTTTCTGTAATAAATACC+AGG + chr4.3:24079391-24079410 MS.gene33784:intron 25.0%
!! TAACGGCATTATGAAAATTT+TGG - chr4.3:24078056-24078075 None:intergenic 25.0%
!! TCAATAGTTTAAGACATGTT+TGG + chr4.3:24075321-24075340 MS.gene33784:intron 25.0%
!! TGATGCAATTGTTTTCAATT+AGG + chr4.3:24076083-24076102 MS.gene33784:intron 25.0%
!! TTTTTGGATATATCCAATAG+CGG + chr4.3:24079149-24079168 MS.gene33784:intron 25.0%
!!! AAGTATCGTCTCAAATTTTT+CGG + chr4.3:24076284-24076303 MS.gene33784:CDS 25.0%
!!! ATCTGTCTCCTTTTTAAAAT+TGG + chr4.3:24079495-24079514 MS.gene33784:intron 25.0%
AAAAAGGAACATAGAAATCC+TGG + chr4.3:24076246-24076265 MS.gene33784:CDS 30.0%
AATTACATGATAGAACAACG+AGG - chr4.3:24079270-24079289 None:intergenic 30.0%
ACAGTACATCCATAATTCAT+TGG - chr4.3:24079954-24079973 None:intergenic 30.0%
ACATCATATACTCCACAATT+TGG + chr4.3:24078483-24078502 MS.gene33784:CDS 30.0%
ACTATTACTTAGCGTATGTT+TGG - chr4.3:24075662-24075681 None:intergenic 30.0%
ACTTATTTGAGCTAATCTAC+CGG - chr4.3:24075635-24075654 None:intergenic 30.0%
AGAAATTCTCTAAGCAATCA+AGG - chr4.3:24075726-24075745 None:intergenic 30.0%
AGCAATAGATTTGAACAACA+TGG + chr4.3:24076453-24076472 MS.gene33784:CDS 30.0%
AGTAATCTTATCTACTGAGT+TGG + chr4.3:24078811-24078830 MS.gene33784:intron 30.0%
ATTTGAACAACATGGAAGTT+AGG + chr4.3:24076461-24076480 MS.gene33784:CDS 30.0%
CAGTTCTCTTTGTAATACAT+GGG + chr4.3:24079847-24079866 MS.gene33784:CDS 30.0%
CATTACAGGAGGAAAAAAAT+CGG + chr4.3:24077685-24077704 MS.gene33784:CDS 30.0%
CGAAAAGCAACTAAAAGATT+TGG + chr4.3:24078350-24078369 MS.gene33784:CDS 30.0%
CGTTGTTCTATCATGTAATT+TGG + chr4.3:24079270-24079289 MS.gene33784:intron 30.0%
CTTGTTCTCATTGATGAAAT+TGG + chr4.3:24077327-24077346 MS.gene33784:CDS 30.0%
GATCTTTGCAAAAGAAGAAA+AGG - chr4.3:24078211-24078230 None:intergenic 30.0%
GGATTGGATATCTATTAATG+AGG - chr4.3:24077984-24078003 None:intergenic 30.0%
GTAATCTTATCTACTGAGTT+GGG + chr4.3:24078812-24078831 MS.gene33784:intron 30.0%
GTTCATAATTTCTGCATGAA+TGG - chr4.3:24077739-24077758 None:intergenic 30.0%
TCAGTTCTCTTTGTAATACA+TGG + chr4.3:24079846-24079865 MS.gene33784:CDS 30.0%
TCATTAGATCAGAACGAAAA+AGG + chr4.3:24076230-24076249 MS.gene33784:CDS 30.0%
TGATATTTATTATGGTCCAG+CGG + chr4.3:24079728-24079747 MS.gene33784:CDS 30.0%
TTAATAGATATCCAATCCTC+GGG + chr4.3:24077986-24078005 MS.gene33784:intron 30.0%
TTATCATACTATATGGACCA+AGG - chr4.3:24077833-24077852 None:intergenic 30.0%
TTGCTTAGAGAATTTCTGTA+TGG + chr4.3:24075729-24075748 MS.gene33784:intron 30.0%
TTTCAGATAATGTCACACTA+AGG + chr4.3:24076788-24076807 MS.gene33784:CDS 30.0%
! AAGTTGAGAGATTTTGTTCA+AGG - chr4.3:24077251-24077270 None:intergenic 30.0%
! AGTATCGTCTCAAATTTTTC+GGG + chr4.3:24076285-24076304 MS.gene33784:CDS 30.0%
! AGTTGAGAGATTTTGTTCAA+GGG - chr4.3:24077250-24077269 None:intergenic 30.0%
! ATCAACGTTTTTGATGTCTA+TGG + chr4.3:24075794-24075813 MS.gene33784:intron 30.0%
! ATCTAAGTACTTTGAAGGAA+AGG + chr4.3:24077451-24077470 MS.gene33784:CDS 30.0%
! ATGAAAATTTTGGATGGAAG+AGG - chr4.3:24078046-24078065 None:intergenic 30.0%
! CAAAATCTCTCAACTTTTAG+TGG + chr4.3:24077255-24077274 MS.gene33784:CDS 30.0%
! GGCATTATGAAAATTTTGGA+TGG - chr4.3:24078052-24078071 None:intergenic 30.0%
! GTATGTCCAATTTTCAGTTT+AGG + chr4.3:24076640-24076659 MS.gene33784:CDS 30.0%
! GTTGACTTCAAAATTAGATC+TGG + chr4.3:24076898-24076917 MS.gene33784:CDS 30.0%
! GTTTGATAGTTTGAAACACT+TGG + chr4.3:24075245-24075264 MS.gene33784:CDS 30.0%
! TCAACGTTTTTGATGTCTAT+GGG + chr4.3:24075795-24075814 MS.gene33784:intron 30.0%
! TCTAAGTACTTTGAAGGAAA+GGG + chr4.3:24077452-24077471 MS.gene33784:CDS 30.0%
! TTCTTTTGCAAAGATCCAAA+GGG + chr4.3:24078215-24078234 MS.gene33784:intron 30.0%
! TTGCATAGATTGCAATCTTT+TGG + chr4.3:24076174-24076193 MS.gene33784:CDS 30.0%
! TTTCATAATGCCGTTATTTC+TGG + chr4.3:24078060-24078079 MS.gene33784:intron 30.0%
! TTTTGCAGTATTTCAAGAAG+GGG - chr4.3:24076115-24076134 None:intergenic 30.0%
!! TTCATAATGCCGTTATTTCT+GGG + chr4.3:24078061-24078080 MS.gene33784:intron 30.0%
!!! ACACTCTTTTAAGACCTTAT+TGG - chr4.3:24075976-24075995 None:intergenic 30.0%
!!! CACTCTTTTAAGACCTTATT+GGG - chr4.3:24075975-24075994 None:intergenic 30.0%
!!! GATCTAATTTTGAAGTCAAC+TGG - chr4.3:24076898-24076917 None:intergenic 30.0%
AAACCTTGCAACCAACTTAT+AGG + chr4.3:24077514-24077533 MS.gene33784:CDS 35.0%
AACCTTGCAACCAACTTATA+GGG + chr4.3:24077515-24077534 MS.gene33784:CDS 35.0%
AACTGCTTCAATGAAAACGT+TGG + chr4.3:24076963-24076982 MS.gene33784:CDS 35.0%
AATCCTGGACTCTTTATTGA+AGG + chr4.3:24076261-24076280 MS.gene33784:CDS 35.0%
AATGCTCTATCAGTCATTAC+AGG + chr4.3:24077671-24077690 MS.gene33784:CDS 35.0%
AATTATGAACGTGTACTCTG+AGG + chr4.3:24077749-24077768 MS.gene33784:CDS 35.0%
AATTGACCATGCACAAAAGT+GGG + chr4.3:24077608-24077627 MS.gene33784:CDS 35.0%
ACTCAAAATTGCTCTTTCCT+CGG - chr4.3:24076506-24076525 None:intergenic 35.0%
ACTGCTTCAATGAAAACGTT+GGG + chr4.3:24076964-24076983 MS.gene33784:CDS 35.0%
ACTTAGATCAGCATAATGAG+TGG - chr4.3:24077439-24077458 None:intergenic 35.0%
AGAAAAGTCCAAAACTTCCT+TGG + chr4.3:24077031-24077050 MS.gene33784:CDS 35.0%
AGAAGAAAAGGAAAAGAGTG+AGG - chr4.3:24078199-24078218 None:intergenic 35.0%
AGAGGATGCAAAATCTCAAA+TGG + chr4.3:24078308-24078327 MS.gene33784:CDS 35.0%
CAAACTATCAAACAATTCCC+TGG - chr4.3:24075238-24075257 None:intergenic 35.0%
CAAATATGATGTTAGGAACC+TGG - chr4.3:24079412-24079431 None:intergenic 35.0%
CAGGTTCCTAACATCATATT+TGG + chr4.3:24079410-24079429 MS.gene33784:intron 35.0%
CAGTATCTTACAATATCTGC+GGG + chr4.3:24077389-24077408 MS.gene33784:CDS 35.0%
CATAATGTCATGTCCCAATA+AGG + chr4.3:24075959-24075978 MS.gene33784:intron 35.0%
CCAGAAAGTCCAATGAATTA+TGG + chr4.3:24079942-24079961 MS.gene33784:CDS 35.0%
CCAGTATCTTACAATATCTG+CGG + chr4.3:24077388-24077407 MS.gene33784:CDS 35.0%
CCATAATTCATTGGACTTTC+TGG - chr4.3:24079945-24079964 None:intergenic 35.0%
CTAATTGCTTTGCACTTTCT+TGG + chr4.3:24078158-24078177 MS.gene33784:intron 35.0%
CTATTGTAGAAACCACTGAA+TGG + chr4.3:24079666-24079685 MS.gene33784:intron 35.0%
CTCATTGATGAAATTGGTAG+TGG + chr4.3:24077333-24077352 MS.gene33784:CDS 35.0%
CTCTTTGTAATACATGGGAT+GGG + chr4.3:24079852-24079871 MS.gene33784:CDS 35.0%
CTGTATCTAATCATTCACAC+AGG + chr4.3:24075271-24075290 MS.gene33784:CDS 35.0%
GAAACAATCTTGGTACAGTA+TGG + chr4.3:24078573-24078592 MS.gene33784:CDS 35.0%
GAAGAAAAGGAAAAGAGTGA+GGG - chr4.3:24078198-24078217 None:intergenic 35.0%
GAGTATGTAAATAGCTAGAG+GGG + chr4.3:24079175-24079194 MS.gene33784:intron 35.0%
GATCGACGCTTAGTAATAAA+TGG - chr4.3:24076328-24076347 None:intergenic 35.0%
GCAAACATCTAAGAATACTG+TGG + chr4.3:24079752-24079771 MS.gene33784:CDS 35.0%
GGAGGAAAAAAATCGGTTAA+AGG + chr4.3:24077692-24077711 MS.gene33784:CDS 35.0%
GGAGTATGTAAATAGCTAGA+GGG + chr4.3:24079174-24079193 MS.gene33784:intron 35.0%
GGATATCTATTAATGAGGCA+CGG - chr4.3:24077979-24077998 None:intergenic 35.0%
TAATAGATATCCAATCCTCG+GGG + chr4.3:24077987-24078006 MS.gene33784:intron 35.0%
TAATTGACCATGCACAAAAG+TGG + chr4.3:24077607-24077626 MS.gene33784:CDS 35.0%
TATAGGTATTTGCTTCCAGA+AGG + chr4.3:24076376-24076395 MS.gene33784:CDS 35.0%
TATCATGTAATTTGGGTGAC+CGG + chr4.3:24079278-24079297 MS.gene33784:intron 35.0%
TCTCTTTGTAATACATGGGA+TGG + chr4.3:24079851-24079870 MS.gene33784:CDS 35.0%
TCTGGAAATTCTTCTGAGTT+GGG + chr4.3:24076811-24076830 MS.gene33784:CDS 35.0%
TGCTGATCTAAGTACTTTGA+AGG + chr4.3:24077446-24077465 MS.gene33784:CDS 35.0%
TTAAGCATAGCGCAATCTAT+TGG + chr4.3:24077570-24077589 MS.gene33784:CDS 35.0%
TTCAGTTTAGGTACTATTGG+AGG + chr4.3:24076652-24076671 MS.gene33784:CDS 35.0%
TTCCAGTGAAAATTCCATTG+CGG - chr4.3:24077496-24077515 None:intergenic 35.0%
TTTATTTCCATCATCTCTCG+AGG - chr4.3:24075478-24075497 None:intergenic 35.0%
! AATTAGATCTGGAACTAGAG+TGG + chr4.3:24076909-24076928 MS.gene33784:CDS 35.0%
! AATTCTTCTGAGTTGGGTAA+TGG + chr4.3:24076817-24076836 MS.gene33784:CDS 35.0%
! ACCATTTTCCCCAGAAATAA+CGG - chr4.3:24078073-24078092 None:intergenic 35.0%
! AGCAGCTTCTTTTATGCATT+TGG + chr4.3:24075889-24075908 MS.gene33784:intron 35.0%
! AGTATGAGCTTTTACAATGG+AGG - chr4.3:24078424-24078443 None:intergenic 35.0%
! CAGTAAATATTGAGGGTATG+CGG + chr4.3:24076731-24076750 MS.gene33784:CDS 35.0%
! CATTTCTAATTGATGGCTAC+CGG + chr4.3:24075613-24075632 MS.gene33784:intron 35.0%
! CTAATTGCACTTGTGCTTTT+GGG + chr4.3:24076006-24076025 MS.gene33784:intron 35.0%
! CTTCTTTTGCAAAGATCCAA+AGG + chr4.3:24078214-24078233 MS.gene33784:intron 35.0%
! GAAAGTGATGGAAACTGATT+GGG - chr4.3:24075553-24075572 None:intergenic 35.0%
! GCAGCTTCTTTTATGCATTT+GGG + chr4.3:24075890-24075909 MS.gene33784:intron 35.0%
! TCTAATTGCACTTGTGCTTT+TGG + chr4.3:24076005-24076024 MS.gene33784:intron 35.0%
! TGAAAGTGATGGAAACTGAT+TGG - chr4.3:24075554-24075573 None:intergenic 35.0%
! TTCTTTTATGCATTTGGGCT+AGG + chr4.3:24075895-24075914 MS.gene33784:intron 35.0%
!! AGGAGTATGAGCTTTTACAA+TGG - chr4.3:24078427-24078446 None:intergenic 35.0%
!! ATAGCTCTATTGCTATTTCG+CGG - chr4.3:24075587-24075606 None:intergenic 35.0%
!! CGAGAGATGATGGAAATAAA+AGG + chr4.3:24075478-24075497 MS.gene33784:intron 35.0%
!! GAGAACAAGTGATTGTTTTG+AGG - chr4.3:24077316-24077335 None:intergenic 35.0%
!! TATCCGTAAGTTTTTGGAAG+TGG + chr4.3:24077290-24077309 MS.gene33784:CDS 35.0%
!! TCATAATGCCGTTATTTCTG+GGG + chr4.3:24078062-24078081 MS.gene33784:intron 35.0%
!! TTCGTCACACTTTGATTTTC+TGG - chr4.3:24077924-24077943 None:intergenic 35.0%
!! TTGTAATTTCCTAATGGGCT+TGG + chr4.3:24076135-24076154 MS.gene33784:CDS 35.0%
!!! AGGAAGTTTTGGACTTTTCT+TGG - chr4.3:24077031-24077050 None:intergenic 35.0%
!!! ATGTTTTGAAAATGCCGCAA+TGG + chr4.3:24077479-24077498 MS.gene33784:CDS 35.0%
AACATTCAAGACCCAACAGA+TGG - chr4.3:24079561-24079580 None:intergenic 40.0%
AACCAACTTATAGGGTTCTC+TGG + chr4.3:24077523-24077542 MS.gene33784:CDS 40.0%
AACCACTGAATGGAAAATCC+CGG + chr4.3:24079676-24079695 MS.gene33784:CDS 40.0%
AAGAATACTGTGGATCTACG+AGG + chr4.3:24079762-24079781 MS.gene33784:CDS 40.0%
AAGATTGTTTCATCATCCCC+AGG - chr4.3:24078564-24078583 None:intergenic 40.0%
AAGTGTGACGAATGTTGTGA+AGG + chr4.3:24077932-24077951 MS.gene33784:intron 40.0%
ACATTCAAGACCCAACAGAT+GGG - chr4.3:24079560-24079579 None:intergenic 40.0%
ACCAACTTATAGGGTTCTCT+GGG + chr4.3:24077524-24077543 MS.gene33784:CDS 40.0%
AGCATTCACTTCCACTTCAA+TGG + chr4.3:24074996-24075015 MS.gene33784:CDS 40.0%
AGGCCACTTCCAAAAACTTA+CGG - chr4.3:24077296-24077315 None:intergenic 40.0%
AGGTTGCAATTCTGTTGAAG+AGG + chr4.3:24076672-24076691 MS.gene33784:CDS 40.0%
ATAGCCTCAAAACTCTCGAA+TGG + chr4.3:24074950-24074969 MS.gene33784:CDS 40.0%
CATTCACACAGGTTTGAACT+TGG + chr4.3:24075282-24075301 MS.gene33784:intron 40.0%
CCGCAGATATTGTAAGATAC+TGG - chr4.3:24077391-24077410 None:intergenic 40.0%
CCTATGCTCAATGGATGAAT+GGG + chr4.3:24076617-24076636 MS.gene33784:CDS 40.0%
CTATGCTCAATGGATGAATG+GGG + chr4.3:24076618-24076637 MS.gene33784:CDS 40.0%
CTCCAATATCTGCAAGGATA+AGG - chr4.3:24077062-24077081 None:intergenic 40.0%
CTTCCTTCAATAAAGAGTCC+AGG - chr4.3:24076267-24076286 None:intergenic 40.0%
GACATTCAATTACAGACTGC+AGG - chr4.3:24078122-24078141 None:intergenic 40.0%
GACCTTATCCTTGCAGATAT+TGG + chr4.3:24077057-24077076 MS.gene33784:CDS 40.0%
GATAAGACAGTTAGAGAGGA+AGG + chr4.3:24078844-24078863 MS.gene33784:intron 40.0%
GATAATGTCACACTAAGGTC+TGG + chr4.3:24076793-24076812 MS.gene33784:CDS 40.0%
GCAATCAAGGAATCATGCAT+TGG - chr4.3:24075713-24075732 None:intergenic 40.0%
GCATCACTTATGTCAAAAGC+CGG + chr4.3:24076991-24077010 MS.gene33784:CDS 40.0%
GCATTCACTTCCACTTCAAT+GGG + chr4.3:24074997-24075016 MS.gene33784:CDS 40.0%
GCATTCAGAACTATACCTTC+TGG - chr4.3:24076394-24076413 None:intergenic 40.0%
GGGAATAGTCAACAAACTAC+CGG - chr4.3:24075181-24075200 None:intergenic 40.0%
GGGCAATCTAATGAAAGTGA+TGG - chr4.3:24075565-24075584 None:intergenic 40.0%
GTCTGGAAATTCTTCTGAGT+TGG + chr4.3:24076810-24076829 MS.gene33784:CDS 40.0%
GTTAAAGGCTCAAGCTGAAA+AGG + chr4.3:24077707-24077726 MS.gene33784:CDS 40.0%
GTTCTGATCTAATGATCTCC+AGG - chr4.3:24076225-24076244 None:intergenic 40.0%
TAGACGTGAAACGATGCTTA+TGG + chr4.3:24078254-24078273 MS.gene33784:CDS 40.0%
TCTGTACACTAACGCTTTGA+AGG + chr4.3:24079591-24079610 MS.gene33784:intron 40.0%
TGAAACGATGCTTATGGCAA+AGG + chr4.3:24078260-24078279 MS.gene33784:CDS 40.0%
TGAAGAGGACAATGACATTG+CGG + chr4.3:24076687-24076706 MS.gene33784:CDS 40.0%
TGGGGATGATGAAACAATCT+TGG + chr4.3:24078563-24078582 MS.gene33784:CDS 40.0%
TGTCAAGGAAGAAAACAGAG+TGG + chr4.3:24078754-24078773 MS.gene33784:intron 40.0%
TGTTCATCTCTAAGTTACCC+CGG - chr4.3:24079698-24079717 None:intergenic 40.0%
TTAGAGATGAACAGCAGCAA+TGG + chr4.3:24079705-24079724 MS.gene33784:CDS 40.0%
TTAGTAAGAATTGGGGCATG+TGG + chr4.3:24079234-24079253 MS.gene33784:intron 40.0%
TTATGGCAAAGGAAGCTCAA+CGG + chr4.3:24078271-24078290 MS.gene33784:CDS 40.0%
TTGCATCCTCTAACTCTTGT+TGG - chr4.3:24078299-24078318 None:intergenic 40.0%
TTGGATATATCCAATAGCGG+AGG + chr4.3:24079152-24079171 MS.gene33784:intron 40.0%
TTGGGATAAGACAGTTAGAG+AGG + chr4.3:24078840-24078859 MS.gene33784:intron 40.0%
! ACTCTGTTTTCTTCCTTGAC+AGG - chr4.3:24078755-24078774 None:intergenic 40.0%
! AGGTCAAACCAAGGAAGTTT+TGG - chr4.3:24077042-24077061 None:intergenic 40.0%
! AGGTTTGATCGAGAAGCTTT+TGG - chr4.3:24075077-24075096 None:intergenic 40.0%
! AGTTCCATTCGAGAGTTTTG+AGG - chr4.3:24074957-24074976 None:intergenic 40.0%
! CAACAACAACTCGACTTTTC+TGG + chr4.3:24075117-24075136 MS.gene33784:CDS 40.0%
! CAAGGGACTGCAATTTTGAA+GGG - chr4.3:24077233-24077252 None:intergenic 40.0%
! CTCACGTATCCGTAAGTTTT+TGG + chr4.3:24077284-24077303 MS.gene33784:CDS 40.0%
! CTTATCTACTGAGTTGGGAA+CGG + chr4.3:24078817-24078836 MS.gene33784:intron 40.0%
! CTTTTGACATAAGTGATGCC+AGG - chr4.3:24076990-24077009 None:intergenic 40.0%
! GAAAAGTCGAGTTGTTGTTG+AGG - chr4.3:24075117-24075136 None:intergenic 40.0%
! GGGAGTATGTAAATAGCTAG+AGG + chr4.3:24079173-24079192 MS.gene33784:intron 40.0%
! GTTGATGTCGTTTAGAACCT+TGG - chr4.3:24075780-24075799 None:intergenic 40.0%
! TAGGCTTTCAAACTCTGAAG+CGG + chr4.3:24076480-24076499 MS.gene33784:CDS 40.0%
! TCAAGGGACTGCAATTTTGA+AGG - chr4.3:24077234-24077253 None:intergenic 40.0%
! TGGATATATCCAATAGCGGA+GGG + chr4.3:24079153-24079172 MS.gene33784:intron 40.0%
! TTGTTGTTGAGGAATGAGTC+TGG - chr4.3:24075106-24075125 None:intergenic 40.0%
! TTTTGCAAAGATCCAAAGGG+AGG + chr4.3:24078218-24078237 MS.gene33784:intron 40.0%
!! AACCCTATAAGTTGGTTGCA+AGG - chr4.3:24077520-24077539 None:intergenic 40.0%
!! AAGGGACTGCAATTTTGAAG+GGG - chr4.3:24077232-24077251 None:intergenic 40.0%
!! CTCTGGAGCAACATACTTTA+TGG + chr4.3:24076420-24076439 MS.gene33784:CDS 40.0%
!! GGGTAATGGAAATGGAACAA+TGG + chr4.3:24076831-24076850 MS.gene33784:CDS 40.0%
!! TAGCTCTATTGCTATTTCGC+GGG - chr4.3:24075586-24075605 None:intergenic 40.0%
!! TCTGAGTTGGGTAATGGAAA+TGG + chr4.3:24076823-24076842 MS.gene33784:CDS 40.0%
!!! AGTTTTGGACTTTTCTTGGC+AGG - chr4.3:24077027-24077046 None:intergenic 40.0%
!!! ATTTTGAAGTCAACTGGCAC+AGG - chr4.3:24076892-24076911 None:intergenic 40.0%
!!! TTCGAGAGTTTTGAGGCTAT+CGG - chr4.3:24074950-24074969 None:intergenic 40.0%
!!! TTTTGAAGTCAACTGGCACA+GGG - chr4.3:24076891-24076910 None:intergenic 40.0%
AAATAGCTAGAGGGGTTGAG+AGG + chr4.3:24079183-24079202 MS.gene33784:intron 45.0%
AACTGATCCTTCAGAAGGTG+TGG + chr4.3:24077356-24077375 MS.gene33784:CDS 45.0%
AAGCTATCCTCGAGAGATGA+TGG + chr4.3:24075468-24075487 MS.gene33784:intron 45.0%
AAGGAAAAGAGTGAGGGAGA+CGG - chr4.3:24078192-24078211 None:intergenic 45.0%
AAGGTTTGAAGGAGAAGCGA+GGG - chr4.3:24074891-24074910 None:intergenic 45.0%
AATAGCTAGAGGGGTTGAGA+GGG + chr4.3:24079184-24079203 MS.gene33784:intron 45.0%
ACCACTGAATGGAAAATCCC+GGG + chr4.3:24079677-24079696 MS.gene33784:CDS 45.0%
AGTGGAACTGATCCTTCAGA+AGG + chr4.3:24077351-24077370 MS.gene33784:CDS 45.0%
ATCTCAGGACCTAATACTGG+AGG + chr4.3:24076937-24076956 MS.gene33784:CDS 45.0%
CAAACTACCGGAAACAGCAA+CGG - chr4.3:24075169-24075188 None:intergenic 45.0%
CCAACTTATAGGGTTCTCTG+GGG + chr4.3:24077525-24077544 MS.gene33784:CDS 45.0%
CCCATTCATCCATTGAGCAT+AGG - chr4.3:24076620-24076639 None:intergenic 45.0%
GCAAGGATAAGGTCAAACCA+AGG - chr4.3:24077051-24077070 None:intergenic 45.0%
GCATCGTTTCACGTCTATCA+AGG - chr4.3:24078251-24078270 None:intergenic 45.0%
GCCTATGCTCAATGGATGAA+TGG + chr4.3:24076616-24076635 MS.gene33784:CDS 45.0%
GCTCTATCAGTCATTACAGG+AGG + chr4.3:24077674-24077693 MS.gene33784:CDS 45.0%
GGTGATCTCCAATATCTGCA+AGG - chr4.3:24077068-24077087 None:intergenic 45.0%
GGTTCAAAATGAGTGACACG+AGG - chr4.3:24079924-24079943 None:intergenic 45.0%
GTAGCAGAAGCAAGGTTTGA+AGG - chr4.3:24074902-24074921 None:intergenic 45.0%
GTCATCTCAGGACCTAATAC+TGG + chr4.3:24076934-24076953 MS.gene33784:CDS 45.0%
GTTCATCTCTAAGTTACCCC+GGG - chr4.3:24079697-24079716 None:intergenic 45.0%
GTTGCAGGATTCTTTGCACT+TGG - chr4.3:24078645-24078664 None:intergenic 45.0%
TAATACATGGGATGGGCACT+GGG + chr4.3:24079859-24079878 MS.gene33784:CDS 45.0%
TATGGCAAAGGAAGCTCAAC+GGG + chr4.3:24078272-24078291 MS.gene33784:CDS 45.0%
TCTCAGGACCTAATACTGGA+GGG + chr4.3:24076938-24076957 MS.gene33784:CDS 45.0%
TCTGCGGGAACATGTTAACT+TGG + chr4.3:24077404-24077423 MS.gene33784:CDS 45.0%
TGATAGAGCAAGTGAAGACC+TGG + chr4.3:24076204-24076223 MS.gene33784:CDS 45.0%
TGATGGAAACTGATTGGGAG+AGG - chr4.3:24075548-24075567 None:intergenic 45.0%
TGCAGATATTGGAGATCACC+AGG + chr4.3:24077068-24077087 MS.gene33784:CDS 45.0%
TGCTGAGAGTTGCTTGCATA+TGG - chr4.3:24074980-24074999 None:intergenic 45.0%
TTACATACTCCCTCCGCTAT+TGG - chr4.3:24079165-24079184 None:intergenic 45.0%
TTCAATGAAAACGTTGGGCC+TGG + chr4.3:24076969-24076988 MS.gene33784:CDS 45.0%
TTCTTAGATGTTTGCACCGC+TGG - chr4.3:24079747-24079766 None:intergenic 45.0%
! AACTAGTTCTCCCACTCATC+AGG + chr4.3:24078662-24078681 MS.gene33784:CDS 45.0%
! ACTAGTTCTCCCACTCATCA+GGG + chr4.3:24078663-24078682 MS.gene33784:CDS 45.0%
! CGCTGATTGTCATCTCAAGA+TGG - chr4.3:24079812-24079831 None:intergenic 45.0%
! GCAGTTTTCCCTCCAGTATT+AGG - chr4.3:24076949-24076968 None:intergenic 45.0%
! GTTTGTTGATGGGGATGAAG+AGG - chr4.3:24074861-24074880 None:intergenic 45.0%
! TAGATCTGGAACTAGAGTGG+TGG + chr4.3:24076912-24076931 MS.gene33784:CDS 45.0%
! TGCCGCAATGGAATTTTCAC+TGG + chr4.3:24077491-24077510 MS.gene33784:CDS 45.0%
!! AGAAGCTTTTGGCTGTCTGT+TGG - chr4.3:24075066-24075085 None:intergenic 45.0%
!! AGCTCTATTGCTATTTCGCG+GGG - chr4.3:24075585-24075604 None:intergenic 45.0%
!! AGGGATTGAGGGTTTGTTGA+TGG - chr4.3:24074872-24074891 None:intergenic 45.0%
!! ATTCTCTCCGTTGCTGTTTC+CGG + chr4.3:24075159-24075178 MS.gene33784:CDS 45.0%
!! GCCGTTATTTCTGGGGAAAA+TGG + chr4.3:24078069-24078088 MS.gene33784:intron 45.0%
!! GGATTGAGGGTTTGTTGATG+GGG - chr4.3:24074870-24074889 None:intergenic 45.0%
!! GGGATTGAGGGTTTGTTGAT+GGG - chr4.3:24074871-24074890 None:intergenic 45.0%
!! TGTTTTCTAGAGACGACTCC+AGG - chr4.3:24076768-24076787 None:intergenic 45.0%
!!! CGTCTCAAATTTTTCGGGCT+GGG + chr4.3:24076290-24076309 MS.gene33784:CDS 45.0%
!!! GAGTTTTGAGGCTATCGGAT+TGG - chr4.3:24074945-24074964 None:intergenic 45.0%
!!! GTCTCAAATTTTTCGGGCTG+GGG + chr4.3:24076291-24076310 MS.gene33784:CDS 45.0%
!!! TCGTCTCAAATTTTTCGGGC+TGG + chr4.3:24076289-24076308 MS.gene33784:CDS 45.0%
!!! TCTCAAATTTTTCGGGCTGG+GGG + chr4.3:24076292-24076311 MS.gene33784:CDS 45.0%
AAAGCTCATACTCCTGCCGT+TGG + chr4.3:24078432-24078451 MS.gene33784:CDS 50.0%
AACCAGAACAGCAGCAAGAG+CGG + chr4.3:24077643-24077662 MS.gene33784:CDS 50.0%
AAGAACACTCGCTGCTTCCA+GGG + chr4.3:24075218-24075237 MS.gene33784:CDS 50.0%
AAGGAGAAGCGAGGGATTGA+GGG - chr4.3:24074883-24074902 None:intergenic 50.0%
ACCTGCTTTCCCTGATGAGT+GGG - chr4.3:24078675-24078694 None:intergenic 50.0%
ACGGGTCCAACAAGAGTTAG+AGG + chr4.3:24078290-24078309 MS.gene33784:CDS 50.0%
ACTAGAGTGGTGGTCATCTC+AGG + chr4.3:24076922-24076941 MS.gene33784:CDS 50.0%
AGAGACGACTCCAGGAGTAA+TGG - chr4.3:24076760-24076779 None:intergenic 50.0%
AGCAGCGAGTGTTCTTCGAA+CGG - chr4.3:24075214-24075233 None:intergenic 50.0%
ATTTGCACCTGCCCATCTGT+TGG + chr4.3:24079546-24079565 MS.gene33784:intron 50.0%
CAAGAGCTGCCTATGCTCAA+TGG + chr4.3:24076608-24076627 MS.gene33784:CDS 50.0%
CAAGGTTTGAAGGAGAAGCG+AGG - chr4.3:24074892-24074911 None:intergenic 50.0%
CAAGTCCGTGTGAAGGGATT+GGG + chr4.3:24078510-24078529 MS.gene33784:CDS 50.0%
CACAGTGGTAGAATTGCCTG+GGG + chr4.3:24078545-24078564 MS.gene33784:CDS 50.0%
CCACAGTGGTAGAATTGCCT+GGG + chr4.3:24078544-24078563 MS.gene33784:CDS 50.0%
CCACTGAATGGAAAATCCCG+GGG + chr4.3:24079678-24079697 MS.gene33784:CDS 50.0%
CCCCAGAGAACCCTATAAGT+TGG - chr4.3:24077528-24077547 None:intergenic 50.0%
GAAAGAGCCACACCTTCTGA+AGG - chr4.3:24077366-24077385 None:intergenic 50.0%
GCAGGATTCTTTGCACTTGG+TGG - chr4.3:24078642-24078661 None:intergenic 50.0%
GGGAGGAAAATTAGCCACAG+TGG + chr4.3:24078530-24078549 MS.gene33784:CDS 50.0%
GTAATACATGGGATGGGCAC+TGG + chr4.3:24079858-24079877 MS.gene33784:CDS 50.0%
TACCTGCTTTCCCTGATGAG+TGG - chr4.3:24078676-24078695 None:intergenic 50.0%
TAGAATGTGCGTGGGCATCA+GGG + chr4.3:24076348-24076367 MS.gene33784:CDS 50.0%
TATGCGGCATCCATTACTCC+TGG + chr4.3:24076747-24076766 MS.gene33784:CDS 50.0%
TCGGTTGAGTAGCAGAAGCA+AGG - chr4.3:24074910-24074929 None:intergenic 50.0%
TCTTCGAACGGTGCAAAGCT+CGG - chr4.3:24075202-24075221 None:intergenic 50.0%
TGACCATGCACAAAAGTGGG+TGG + chr4.3:24077611-24077630 MS.gene33784:CDS 50.0%
TGAGTGGGAGAACTAGTTGC+AGG - chr4.3:24078660-24078679 None:intergenic 50.0%
TTCCTCCCAATCCCTTCACA+CGG - chr4.3:24078518-24078537 None:intergenic 50.0%
TTCGATAAGCTGTGCGACCA+AGG + chr4.3:24075760-24075779 MS.gene33784:intron 50.0%
TTGAGGAATGAGTCTGGCAG+CGG - chr4.3:24075100-24075119 None:intergenic 50.0%
TTTGCACCTGCCCATCTGTT+GGG + chr4.3:24079547-24079566 MS.gene33784:intron 50.0%
! AATACATGGGATGGGCACTG+GGG + chr4.3:24079860-24079879 MS.gene33784:CDS 50.0%
! AGGGTTCTCTGGGGATGTAT+TGG + chr4.3:24077534-24077553 MS.gene33784:CDS 50.0%
! CGGACTTGCTCTCCAAATTG+TGG - chr4.3:24078498-24078517 None:intergenic 50.0%
! CGTCGATCTAGAATGTGCGT+GGG + chr4.3:24076340-24076359 MS.gene33784:CDS 50.0%
! CTACTGAGTTGGGAACGGTT+GGG + chr4.3:24078822-24078841 MS.gene33784:intron 50.0%
! GCTATCGGATTGGACTGAGT+TGG - chr4.3:24074935-24074954 None:intergenic 50.0%
! GCTTCTAAAAGCGCGTCACA+AGG + chr4.3:24076853-24076872 MS.gene33784:CDS 50.0%
! GGATTGGACTGAGTTGGACT+CGG - chr4.3:24074929-24074948 None:intergenic 50.0%
! TCTACTGAGTTGGGAACGGT+TGG + chr4.3:24078821-24078840 MS.gene33784:intron 50.0%
!! TCTCCACCCACTTTTGTGCA+TGG - chr4.3:24077617-24077636 None:intergenic 50.0%
AATGCGATCAGCGCCACTGA+TGG - chr4.3:24078463-24078482 None:intergenic 55.0%
AGTACGTCCGACGGGTAAAC+GGG - chr4.3:24075043-24075062 None:intergenic 55.0%
ATGCGATCAGCGCCACTGAT+GGG - chr4.3:24078462-24078481 None:intergenic 55.0%
CAAGGTCTTCTGCCTCCCTT+TGG - chr4.3:24078233-24078252 None:intergenic 55.0%
CAATGACATTGCGGTCGTGC+AGG + chr4.3:24076696-24076715 MS.gene33784:CDS 55.0%
CCCAGGCAATTCTACCACTG+TGG - chr4.3:24078547-24078566 None:intergenic 55.0%
CTAGAATGTGCGTGGGCATC+AGG + chr4.3:24076347-24076366 MS.gene33784:CDS 55.0%
CTTCGAACGGTGCAAAGCTC+GGG - chr4.3:24075201-24075220 None:intergenic 55.0%
CTTGGCAGGCAGATGCATTC+CGG - chr4.3:24077013-24077032 None:intergenic 55.0%
GAAGAACACTCGCTGCTTCC+AGG + chr4.3:24075217-24075236 MS.gene33784:CDS 55.0%
GAAGGAGAAGCGAGGGATTG+AGG - chr4.3:24074884-24074903 None:intergenic 55.0%
GAGTACGTCCGACGGGTAAA+CGG - chr4.3:24075044-24075063 None:intergenic 55.0%
GAGTGAGGGAGACGGATAGA+CGG - chr4.3:24078184-24078203 None:intergenic 55.0%
GATGGGGATGAAGAGGTTGC+AGG - chr4.3:24074854-24074873 None:intergenic 55.0%
GCAAGTCCGTGTGAAGGGAT+TGG + chr4.3:24078509-24078528 MS.gene33784:CDS 55.0%
GCCACAGTGGTAGAATTGCC+TGG + chr4.3:24078543-24078562 MS.gene33784:CDS 55.0%
GCCACTGATGGGAGAACCAA+CGG - chr4.3:24078451-24078470 None:intergenic 55.0%
GGAGAGCAAGTCCGTGTGAA+GGG + chr4.3:24078504-24078523 MS.gene33784:CDS 55.0%
GGATCTACGAGGTATGCGAC+TGG + chr4.3:24079773-24079792 MS.gene33784:CDS 55.0%
GTATGTTGCTCCAGAGCTGC+TGG - chr4.3:24076416-24076435 None:intergenic 55.0%
GTCTGTTGGAGTACGTCCGA+CGG - chr4.3:24075052-24075071 None:intergenic 55.0%
TCAAGACCCAACAGATGGGC+AGG - chr4.3:24079556-24079575 None:intergenic 55.0%
TCCCACTCATCAGGGAAAGC+AGG + chr4.3:24078671-24078690 MS.gene33784:CDS 55.0%
TCTGTTGGAGTACGTCCGAC+GGG - chr4.3:24075051-24075070 None:intergenic 55.0%
TCTTGGCTATCCCCGAGGAT+TGG - chr4.3:24078000-24078019 None:intergenic 55.0%
TGAGGCACGGCATGATGTGT+TGG - chr4.3:24077966-24077985 None:intergenic 55.0%
TGGAGAGCAAGTCCGTGTGA+AGG + chr4.3:24078503-24078522 MS.gene33784:CDS 55.0%
TGGGCATCAGGGCTTCGTAT+AGG + chr4.3:24076359-24076378 MS.gene33784:CDS 55.0%
! CCCCGGGATTTTCCATTCAG+TGG - chr4.3:24079681-24079700 None:intergenic 55.0%
! GCGTCGATCTAGAATGTGCG+TGG + chr4.3:24076339-24076358 MS.gene33784:CDS 55.0%
! GTTCTGAATGCCAGCAGCTC+TGG + chr4.3:24076403-24076422 MS.gene33784:CDS 55.0%
!! TTCAAACTCTGAAGCGGCCG+AGG + chr4.3:24076486-24076505 MS.gene33784:CDS 55.0%
AACAGCGCCCGTTTACCCGT+CGG + chr4.3:24075033-24075052 MS.gene33784:CDS 60.0%
ACAGCTCTTGGCTATCCCCG+AGG - chr4.3:24078005-24078024 None:intergenic 60.0%
AGGAATGAGTCTGGCAGCGG+AGG - chr4.3:24075097-24075116 None:intergenic 60.0%
AGGGGTTGAGAGGGAGAGAC+CGG + chr4.3:24079193-24079212 MS.gene33784:intron 60.0%
CTCCGCTCTTGCTGCTGTTC+TGG - chr4.3:24077648-24077667 None:intergenic 60.0%
CTGATGGGAGAACCAACGGC+AGG - chr4.3:24078447-24078466 None:intergenic 60.0%
GAACAGCAGCAAGAGCGGAG+AGG + chr4.3:24077648-24077667 MS.gene33784:CDS 60.0%
GTCCGTGTGAAGGGATTGGG+AGG + chr4.3:24078513-24078532 MS.gene33784:CDS 60.0%
TCCTGCGCTCCAAGCCCATT+AGG - chr4.3:24076147-24076166 None:intergenic 60.0%
!! GCCGTTGGTTCTCCCATCAG+TGG + chr4.3:24078447-24078466 MS.gene33784:CDS 60.0%
!! TCCTAATGGGCTTGGAGCGC+AGG + chr4.3:24076143-24076162 MS.gene33784:CDS 60.0%
GGCGGAGGAGCCCATTGAAG+TGG - chr4.3:24075010-24075029 None:intergenic 65.0%
! GACGGGTAAACGGGCGCTGT+TGG - chr4.3:24075034-24075053 None:intergenic 65.0%
! GGGTAAACGGGCGCTGTTGG+CGG - chr4.3:24075031-24075050 None:intergenic 65.0%
! TAAACGGGCGCTGTTGGCGG+CGG - chr4.3:24075028-24075047 None:intergenic 65.0%
!! ACGGGCGCTGTTGGCGGCGG+AGG - chr4.3:24075025-24075044 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 24074841 24079989 24074841 ID=MS.gene33784
chr4.3 mRNA 24074841 24079989 24074841 ID=MS.gene33784.t1;Parent=MS.gene33784
chr4.3 exon 24074841 24075292 24074841 ID=MS.gene33784.t1.exon1;Parent=MS.gene33784.t1
chr4.3 CDS 24074841 24075292 24074841 ID=cds.MS.gene33784.t1;Parent=MS.gene33784.t1
chr4.3 exon 24076105 24077089 24076105 ID=MS.gene33784.t1.exon2;Parent=MS.gene33784.t1
chr4.3 CDS 24076105 24077089 24076105 ID=cds.MS.gene33784.t1;Parent=MS.gene33784.t1
chr4.3 exon 24077246 24077770 24077246 ID=MS.gene33784.t1.exon3;Parent=MS.gene33784.t1
chr4.3 CDS 24077246 24077770 24077246 ID=cds.MS.gene33784.t1;Parent=MS.gene33784.t1
chr4.3 exon 24078228 24078692 24078228 ID=MS.gene33784.t1.exon4;Parent=MS.gene33784.t1
chr4.3 CDS 24078228 24078692 24078228 ID=cds.MS.gene33784.t1;Parent=MS.gene33784.t1
chr4.3 exon 24079675 24079989 24079675 ID=MS.gene33784.t1.exon5;Parent=MS.gene33784.t1
chr4.3 CDS 24079675 24079989 24079675 ID=cds.MS.gene33784.t1;Parent=MS.gene33784.t1
Gene Sequence

>MS.gene33784

ATGCAACTCACCTGCAACCTCTTCATCCCCATCAACAAACCCTCAATCCCTCGCTTCTCCTTCAAACCTTGCTTCTGCTACTCAACCGAGTCCAACTCAGTCCAATCCGATAGCCTCAAAACTCTCGAATGGAACTCCATATGCAAGCAACTCTCAGCATTCACTTCCACTTCAATGGGCTCCTCCGCCGCCAACAGCGCCCGTTTACCCGTCGGACGTACTCCAACAGACAGCCAAAAGCTTCTCGATCAAACCTCCGCTGCCAGACTCATTCCTCAACAACAACTCGACTTTTCTGGAATACATGACTTGACTGACATTCTCTCCGTTGCTGTTTCCGGTAGTTTGTTGACTATTCCCGAGCTTTGCACCGTTCGAAGAACACTCGCTGCTTCCAGGGAATTGTTTGATAGTTTGAAACACTTGGCTTCTGTATCTAATCATTCACACAGGTTTGAACTTGGAATCTAACTCAAAAACTCAATAGTTTAAGACATGTTTGGATAAACAACTTAACAAAGTGCTTATCATACAAGTGATTATGTATTATGTTTGAAGTTAGTAGTTCGATAACAAAAGATAAAATAAAATCAAATTGTTTTTATATAAGCTAGAAGATGTTTTCATAAGCTATCCTCGAGAGATGATGGAAATAAAAGGAAACAGTTTATGGGCACATCATAATCTATTAACATGTTACATAACCTCTCCCAATCAGTTTCCATCACTTTCATTAGATTGCCCCGCGAAATAGCAATAGAGCTATTTCAGACATTTCTAATTGATGGCTACCGGTAGATTAGCTCAAATAAGTCAATCCAAACATACGCTAAGTAATAGTTGTTTTAAGCAACACTTATTCATTCTTACCAATGCATGATTCCTTGATTGCTTAGAGAATTTCTGTATGGAGATTAAATTCGATAAGCTGTGCGACCAAGGTTCTAAACGACATCAACGTTTTTGATGTCTATGGGAAGTCATATCAGTCAGTTTGAGTGCACTACAAGTTTTTTTTTTTTCTTTTCATAATCTGATTCAGTTCACAAGCAGCTTCTTTTATGCATTTGGGCTAGGTGTTGTATTTTTCTTGACAAAGTTCGGAGCATAGATCATTTCATAATGTCATGTCCCAATAAGGTCTTAAAAGAGTGTTAGTAATACTCTAATTGCACTTGTGCTTTTGGGCATAACTGATTCCTTTTACAAATCCAAAGTAAAAGTTCACAAAAATAACTTCGCTGATGCAATTGTTTTCAATTAGGTACTCACCCCTTCTTGAAATACTGCAAAATTGTAATTTCCTAATGGGCTTGGAGCGCAGGATAGAATTTTGCATAGATTGCAATCTTTTGGTAATTCTTGATAGAGCAAGTGAAGACCTGGAGATCATTAGATCAGAACGAAAAAGGAACATAGAAATCCTGGACTCTTTATTGAAGGAAGTATCGTCTCAAATTTTTCGGGCTGGGGGTATTGACAGACCATTTATTACTAAGCGTCGATCTAGAATGTGCGTGGGCATCAGGGCTTCGTATAGGTATTTGCTTCCAGAAGGTATAGTTCTGAATGCCAGCAGCTCTGGAGCAACATACTTTATGGAACCGAAAGAAGCAATAGATTTGAACAACATGGAAGTTAGGCTTTCAAACTCTGAAGCGGCCGAGGAAAGAGCAATTTTGAGTATGCTTGCATCTGAAATAGCAAATTCAGAATCAGAGATAAAATATTTGTTGGATAAAATTCTTGAGATTGATCTTGCTTTTGCAAGAGCTGCCTATGCTCAATGGATGAATGGGGTATGTCCAATTTTCAGTTTAGGTACTATTGGAGGTTGCAATTCTGTTGAAGAGGACAATGACATTGCGGTCGTGCAGGATGACGATTTAACAGTAAATATTGAGGGTATGCGGCATCCATTACTCCTGGAGTCGTCTCTAGAAAACATTTCAGATAATGTCACACTAAGGTCTGGAAATTCTTCTGAGTTGGGTAATGGAAATGGAACAATGGCTTCTAAAAGCGCGTCACAAGGCATAACAGACTTCCCTGTGCCAGTTGACTTCAAAATTAGATCTGGAACTAGAGTGGTGGTCATCTCAGGACCTAATACTGGAGGGAAAACTGCTTCAATGAAAACGTTGGGCCTGGCATCACTTATGTCAAAAGCCGGAATGCATCTGCCTGCCAAGAAAAGTCCAAAACTTCCTTGGTTTGACCTTATCCTTGCAGATATTGGAGATCACCAGGTAATATCTGAACTTTTTTATGCATGATGAAGATTTTTTATTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTCATGTGGCTGTTTCATTTGTGTCTGATCTTTTTCTCCCCTTCAAAATTGCAGTCCCTTGAACAAAATCTCTCAACTTTTAGTGGGCACATCTCACGTATCCGTAAGTTTTTGGAAGTGGCCTCAAAACAATCACTTGTTCTCATTGATGAAATTGGTAGTGGAACTGATCCTTCAGAAGGTGTGGCTCTTTCTGCCAGTATCTTACAATATCTGCGGGAACATGTTAACTTGGCTGTTGTGACCACTCATTATGCTGATCTAAGTACTTTGAAGGAAAGGGATACATGTTTTGAAAATGCCGCAATGGAATTTTCACTGGAAACCTTGCAACCAACTTATAGGGTTCTCTGGGGATGTATTGGTGATTCAAATGCATTAAGCATAGCGCAATCTATTGGCTTTGATAAAAATATAATTGACCATGCACAAAAGTGGGTGGAGAAATTAAAACCAGAACAGCAGCAAGAGCGGAGAGGAATGCTCTATCAGTCATTACAGGAGGAAAAAAATCGGTTAAAGGCTCAAGCTGAAAAGGCTGCTTCCATTCATGCAGAAATTATGAACGTGTACTCTGAGGTACAATCTAGCTGTTCAGTTAGAAATAGATAATGTGTTTCTTTATTATAGTTTCTTCTCCTTGGTCCATATAGTATGATAATCATTATTGTCCCTTTTAAAGTTTATCTGAAATTTGCATCGTTCATAAGTAATGACTCAGTAAATTGACCAGAAAATCAAAGTGTGACGAATGTTGTGAAGGTCTTTTGACCAACACATCATGCCGTGCCTCATTAATAGATATCCAATCCTCGGGGATAGCCAAGAGCTGTTAATTTAAATATGTAGCGCCTCTTCCATCCAAAATTTTCATAATGCCGTTATTTCTGGGGAAAATGGTTCAGCGTAAGAATTGTAGAGCATTTGCCTGCAGTCTGTAATTGAATGTCATCATATTTGCTGTTGCTAATTGCTTTGCACTTTCTTGGCCGTCTATCCGTCTCCCTCACTCTTTTCCTTTTCTTCTTTTGCAAAGATCCAAAGGGAGGCAGAAGACCTTGATAGACGTGAAACGATGCTTATGGCAAAGGAAGCTCAACGGGTCCAACAAGAGTTAGAGGATGCAAAATCTCAAATGGAAATTGTAATACAGAAATTCGAAAAGCAACTAAAAGATTTGGGACGCAACCAACTCAATTCAATAATTAAAGAATCTGAAACTGCAATTGCCTCCATTGTAAAAGCTCATACTCCTGCCGTTGGTTCTCCCATCAGTGGCGCTGATCGCATTACATCATATACTCCACAATTTGGAGAGCAAGTCCGTGTGAAGGGATTGGGAGGAAAATTAGCCACAGTGGTAGAATTGCCTGGGGATGATGAAACAATCTTGGTACAGTATGGTAAAGTGAAAGTACGTGTGAAGAAAAATCGCATCAGAGCTATTCCACCAAGTGCAAAGAATCCTGCAACTAGTTCTCCCACTCATCAGGGAAAGCAGGTATGTACAAAGAAATCTTTGCTGTCATATAAATAATCTAATTCAATTAATATAGTTAACCTGTCAAGGAAGAAAACAGAGTGGTATACGTTTCCATTAAGAAAGTTATTTTGCAAGCAGTAATCTTATCTACTGAGTTGGGAACGGTTGGGATAAGACAGTTAGAGAGGAAGGTTACTTCCTCTAGTTTCAAATATAATAAGAAGAAAAAAAGTAGTTCGCGCTAGTTAAGAATACTATAAAATCATATTTAATTTTTTGATGTAATAAAAAATATATTGTATTATCTAAAATATTCTTCGTGGAAACTTGTTTCATATAAGTAAAAGAAGTTATTGGAAAATGAAATCCAAATTTTATTGAAAGGTATTTTATATTTAATCTGGCATTTTTTCTTTTGAAGTAATGGTAAAATTAATTTAGAATTGATATATTTTGGATCCCCAAACATAGACTTTTTTGGATATATCCAATAGCGGAGGGAGTATGTAAATAGCTAGAGGGGTTGAGAGGGAGAGACCGGAGAGTATTTGTTACTATTTTAGTAAGAATTGGGGCATGTGGAGTTGTAGATCCTCGTTGTTCTATCATGTAATTTGGGTGACCGGAGAGTATTTGTTACTATTTTAGTAAGAATTGGGGCATGTGGAGTTGTAGATCCTCGTTGTTCTATCATGTAATTTGGGTAGCTTTCTCCTGTTTTTCTGTAATAAATACCAGGTTCCTAACATCATATTTGGAAATTGGAACTTCAGATCATCCTATAATATAGGCACATTGAATTGAATTTTCTATAAAATTAATCTGTCTCCTTTTTAAAATTGGCTTCTTAACCTAATTTGATTTAGACAAAATTTGCACCTGCCCATCTGTTGGGTCTTGAATGTTTGTAGAATTTTCTGTACACTAACGCTTTGAAGGATGACAGTAATTGATCTATATCAAACTGCTGAGTTTGAACACTGTTGATTTACTATTGTAGAAACCACTGAATGGAAAATCCCGGGGTAACTTAGAGATGAACAGCAGCAATGGTGATATTTATTATGGTCCAGCGGTGCAAACATCTAAGAATACTGTGGATCTACGAGGTATGCGACTGGAAGAAGCTGCGATCCATCTTGAGATGACAATCAGCGCAAGTCAGCCATATTCAGTTCTCTTTGTAATACATGGGATGGGCACTGGGGCTGTTAAAGATCGTGCACTTGCTATTCTGCAAAAGCATCCTCGTGTCACTCATTTTGAACCAGAAAGTCCAATGAATTATGGATGTACTGTTGCACGTGTTAAGTGA
Protein sequence

>MS.gene33784.t1

MQLTCNLFIPINKPSIPRFSFKPCFCYSTESNSVQSDSLKTLEWNSICKQLSAFTSTSMGSSAANSARLPVGRTPTDSQKLLDQTSAARLIPQQQLDFSGIHDLTDILSVAVSGSLLTIPELCTVRRTLAASRELFDSLKHLASVSNHSHRYSPLLEILQNCNFLMGLERRIEFCIDCNLLVILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFRAGGIDRPFITKRRSRMCVGIRASYRYLLPEGIVLNASSSGATYFMEPKEAIDLNNMEVRLSNSEAAEERAILSMLASEIANSESEIKYLLDKILEIDLAFARAAYAQWMNGVCPIFSLGTIGGCNSVEEDNDIAVVQDDDLTVNIEGMRHPLLLESSLENISDNVTLRSGNSSELGNGNGTMASKSASQGITDFPVPVDFKIRSGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKSPKLPWFDLILADIGDHQSLEQNLSTFSGHISRIRKFLEVASKQSLVLIDEIGSGTDPSEGVALSASILQYLREHVNLAVVTTHYADLSTLKERDTCFENAAMEFSLETLQPTYRVLWGCIGDSNALSIAQSIGFDKNIIDHAQKWVEKLKPEQQQERRGMLYQSLQEEKNRLKAQAEKAASIHAEIMNVYSEIQREAEDLDRRETMLMAKEAQRVQQELEDAKSQMEIVIQKFEKQLKDLGRNQLNSIIKESETAIASIVKAHTPAVGSPISGADRITSYTPQFGEQVRVKGLGGKLATVVELPGDDETILVQYGKVKVRVKKNRIRAIPPSAKNPATSSPTHQGKQKPLNGKSRGNLEMNSSNGDIYYGPAVQTSKNTVDLRGMRLEEAAIHLEMTISASQPYSVLFVIHGMGTGAVKDRALAILQKHPRVTHFEPESPMNYGCTVARVK