Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61145.t1 | XP_003608562.1 | 94.5 | 145 | 8 | 0 | 1 | 145 | 1 | 145 | 3.00E-71 | 277.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61145.t1 | G7JF90 | 94.5 | 145 | 8 | 0 | 1 | 145 | 1 | 145 | 2.2e-71 | 277.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene61145 | 0.829928 | 3.91E-55 | -1.69E-46 |
| MS.gene049171 | MS.gene61145 | 0.913451 | 6.06E-84 | -1.69E-46 |
| MS.gene049217 | MS.gene61145 | 0.832303 | 1.02E-55 | -1.69E-46 |
| MS.gene04921 | MS.gene61145 | -0.800335 | 1.51E-48 | -1.69E-46 |
| MS.gene049222 | MS.gene61145 | 0.882338 | 1.13E-70 | -1.69E-46 |
| MS.gene049232 | MS.gene61145 | 0.818938 | 1.51E-52 | -1.69E-46 |
| MS.gene049257 | MS.gene61145 | 0.854553 | 1.14E-61 | -1.69E-46 |
| MS.gene049285 | MS.gene61145 | 0.869683 | 2.58E-66 | -1.69E-46 |
| MS.gene049320 | MS.gene61145 | 0.8436 | 1.27E-58 | -1.69E-46 |
| MS.gene049373 | MS.gene61145 | 0.822994 | 1.76E-53 | -1.69E-46 |
| MS.gene04939 | MS.gene61145 | 0.808558 | 2.92E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene61145 | 0.848202 | 7.12E-60 | -1.69E-46 |
| MS.gene049627 | MS.gene61145 | 0.824444 | 8.04E-54 | -1.69E-46 |
| MS.gene049633 | MS.gene61145 | 0.881078 | 3.23E-70 | -1.69E-46 |
| MS.gene049805 | MS.gene61145 | 0.806317 | 8.72E-50 | -1.69E-46 |
| MS.gene049865 | MS.gene61145 | 0.832191 | 1.09E-55 | -1.69E-46 |
| MS.gene05010 | MS.gene61145 | 0.843821 | 1.11E-58 | -1.69E-46 |
| MS.gene050163 | MS.gene61145 | 0.839004 | 2.05E-57 | -1.69E-46 |
| MS.gene050165 | MS.gene61145 | 0.832033 | 1.19E-55 | -1.69E-46 |
| MS.gene050170 | MS.gene61145 | 0.913678 | 4.66E-84 | -1.69E-46 |
| MS.gene050323 | MS.gene61145 | 0.875708 | 2.49E-68 | -1.69E-46 |
| MS.gene050333 | MS.gene61145 | 0.80157 | 8.46E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene61145 | -0.806607 | 7.58E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene61145 | 0.826754 | 2.28E-54 | -1.69E-46 |
| MS.gene050496 | MS.gene61145 | 0.871087 | 8.92E-67 | -1.69E-46 |
| MS.gene050504 | MS.gene61145 | 0.896142 | 4.90E-76 | -1.69E-46 |
| MS.gene050518 | MS.gene61145 | 0.847043 | 1.48E-59 | -1.69E-46 |
| MS.gene050538 | MS.gene61145 | 0.833813 | 4.30E-56 | -1.69E-46 |
| MS.gene050577 | MS.gene61145 | 0.908348 | 1.89E-81 | -1.69E-46 |
| MS.gene050593 | MS.gene61145 | 0.822242 | 2.63E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene61145 | 0.871516 | 6.44E-67 | -1.69E-46 |
| MS.gene050647 | MS.gene61145 | -0.802937 | 4.43E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene61145 | 0.853065 | 3.06E-61 | -1.69E-46 |
| MS.gene050699 | MS.gene61145 | 0.878224 | 3.34E-69 | -1.69E-46 |
| MS.gene050747 | MS.gene61145 | 0.876001 | 1.97E-68 | -1.69E-46 |
| MS.gene050772 | MS.gene61145 | 0.831533 | 1.58E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene61145 | 0.875955 | 2.05E-68 | -1.69E-46 |
| MS.gene05081 | MS.gene61145 | 0.882973 | 6.64E-71 | -1.69E-46 |
| MS.gene050868 | MS.gene61145 | 0.886548 | 3.11E-72 | -1.69E-46 |
| MS.gene050871 | MS.gene61145 | 0.885842 | 5.74E-72 | -1.69E-46 |
| MS.gene050876 | MS.gene61145 | 0.819415 | 1.18E-52 | -1.69E-46 |
| MS.gene050904 | MS.gene61145 | 0.896162 | 4.81E-76 | -1.69E-46 |
| MS.gene050950 | MS.gene61145 | 0.869198 | 3.71E-66 | -1.69E-46 |
| MS.gene050986 | MS.gene61145 | 0.866202 | 3.39E-65 | -1.69E-46 |
| MS.gene051138 | MS.gene61145 | -0.807786 | 4.26E-50 | -1.69E-46 |
| MS.gene051268 | MS.gene61145 | 0.833154 | 6.28E-56 | -1.69E-46 |
| MS.gene051317 | MS.gene61145 | 0.897255 | 1.68E-76 | -1.69E-46 |
| MS.gene051551 | MS.gene61145 | 0.830318 | 3.14E-55 | -1.69E-46 |
| MS.gene051552 | MS.gene61145 | -0.821667 | 3.57E-53 | -1.69E-46 |
| MS.gene051651 | MS.gene61145 | -0.821158 | 4.68E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene61145 | 0.816676 | 4.89E-52 | -1.69E-46 |
| MS.gene051694 | MS.gene61145 | 0.809667 | 1.69E-50 | -1.69E-46 |
| MS.gene051734 | MS.gene61145 | 0.81144 | 6.99E-51 | -1.69E-46 |
| MS.gene051761 | MS.gene61145 | -0.81303 | 3.15E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene61145 | 0.901919 | 1.65E-78 | -1.69E-46 |
| MS.gene051858 | MS.gene61145 | 0.802649 | 5.07E-49 | -1.69E-46 |
| MS.gene051941 | MS.gene61145 | 0.845698 | 3.45E-59 | -1.69E-46 |
| MS.gene051946 | MS.gene61145 | -0.824696 | 7.02E-54 | -1.69E-46 |
| MS.gene051973 | MS.gene61145 | -0.831295 | 1.81E-55 | -1.69E-46 |
| MS.gene052015 | MS.gene61145 | -0.860822 | 1.58E-63 | -1.69E-46 |
| MS.gene052129 | MS.gene61145 | -0.801608 | 8.31E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene61145 | 0.891081 | 5.50E-74 | -1.69E-46 |
| MS.gene052482 | MS.gene61145 | 0.876344 | 1.50E-68 | -1.69E-46 |
| MS.gene052486 | MS.gene61145 | 0.890891 | 6.53E-74 | -1.69E-46 |
| MS.gene052494 | MS.gene61145 | -0.860412 | 2.10E-63 | -1.69E-46 |
| MS.gene052501 | MS.gene61145 | 0.843831 | 1.10E-58 | -1.69E-46 |
| MS.gene052503 | MS.gene61145 | 0.902352 | 1.06E-78 | -1.69E-46 |
| MS.gene052504 | MS.gene61145 | 0.800769 | 1.23E-48 | -1.69E-46 |
| MS.gene052505 | MS.gene61145 | 0.825196 | 5.35E-54 | -1.69E-46 |
| MS.gene052506 | MS.gene61145 | 0.84696 | 1.56E-59 | -1.69E-46 |
| MS.gene052606 | MS.gene61145 | -0.8229 | 1.85E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene61145 | 0.850963 | 1.21E-60 | -1.69E-46 |
| MS.gene052820 | MS.gene61145 | 0.809029 | 2.32E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene61145 | 0.835452 | 1.66E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene61145 | 0.900921 | 4.51E-78 | -1.69E-46 |
| MS.gene052825 | MS.gene61145 | 0.904161 | 1.64E-79 | -1.69E-46 |
| MS.gene052870 | MS.gene61145 | 0.81474 | 1.32E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene61145 | 0.836815 | 7.50E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene61145 | 0.882132 | 1.35E-70 | -1.69E-46 |
| MS.gene052982 | MS.gene61145 | 0.806479 | 8.06E-50 | -1.69E-46 |
| MS.gene053097 | MS.gene61145 | -0.836705 | 8.00E-57 | -1.69E-46 |
| MS.gene053117 | MS.gene61145 | 0.808289 | 3.33E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene61145 | 0.906106 | 2.11E-80 | -1.69E-46 |
| MS.gene053207 | MS.gene61145 | 0.835597 | 1.53E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene61145 | 0.829505 | 4.96E-55 | -1.69E-46 |
| MS.gene053284 | MS.gene61145 | 0.81756 | 3.10E-52 | -1.69E-46 |
| MS.gene053285 | MS.gene61145 | 0.801983 | 6.96E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene61145 | 0.831389 | 1.72E-55 | -1.69E-46 |
| MS.gene053421 | MS.gene61145 | -0.82919 | 5.91E-55 | -1.69E-46 |
| MS.gene053436 | MS.gene61145 | 0.851553 | 8.24E-61 | -1.69E-46 |
| MS.gene053479 | MS.gene61145 | 0.879515 | 1.17E-69 | -1.69E-46 |
| MS.gene053480 | MS.gene61145 | 0.891647 | 3.28E-74 | -1.69E-46 |
| MS.gene053549 | MS.gene61145 | -0.809551 | 1.79E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene61145 | 0.836304 | 1.01E-56 | -1.69E-46 |
| MS.gene053579 | MS.gene61145 | 0.816275 | 6.01E-52 | -1.69E-46 |
| MS.gene053626 | MS.gene61145 | 0.830376 | 3.04E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene61145 | 0.850076 | 2.15E-60 | -1.69E-46 |
| MS.gene053824 | MS.gene61145 | 0.89166 | 3.24E-74 | -1.69E-46 |
| MS.gene053997 | MS.gene61145 | 0.827559 | 1.46E-54 | -1.69E-46 |
| MS.gene054003 | MS.gene61145 | 0.801084 | 1.06E-48 | -1.69E-46 |
| MS.gene054107 | MS.gene61145 | 0.816228 | 6.16E-52 | -1.69E-46 |
| MS.gene054343 | MS.gene61145 | 0.842744 | 2.14E-58 | -1.69E-46 |
| MS.gene054344 | MS.gene61145 | 0.889134 | 3.18E-73 | -1.69E-46 |
| MS.gene054408 | MS.gene61145 | 0.852039 | 6.00E-61 | -1.69E-46 |
| MS.gene054595 | MS.gene61145 | 0.871098 | 8.85E-67 | -1.69E-46 |
| MS.gene054600 | MS.gene61145 | 0.86451 | 1.15E-64 | -1.69E-46 |
| MS.gene054633 | MS.gene61145 | -0.802333 | 5.90E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene61145 | 0.825712 | 4.04E-54 | -1.69E-46 |
| MS.gene054706 | MS.gene61145 | -0.843728 | 1.17E-58 | -1.69E-46 |
| MS.gene05470 | MS.gene61145 | 0.919866 | 2.63E-87 | -1.69E-46 |
| MS.gene054851 | MS.gene61145 | -0.838772 | 2.36E-57 | -1.69E-46 |
| MS.gene054884 | MS.gene61145 | -0.84728 | 1.28E-59 | -1.69E-46 |
| MS.gene054927 | MS.gene61145 | 0.850312 | 1.84E-60 | -1.69E-46 |
| MS.gene05494 | MS.gene61145 | 0.802264 | 6.09E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene61145 | 0.869174 | 3.77E-66 | -1.69E-46 |
| MS.gene055158 | MS.gene61145 | -0.813735 | 2.20E-51 | -1.69E-46 |
| MS.gene055159 | MS.gene61145 | -0.806903 | 6.56E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene61145 | 0.848463 | 6.03E-60 | -1.69E-46 |
| MS.gene055224 | MS.gene61145 | 0.828252 | 9.97E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene61145 | 0.801706 | 7.93E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene61145 | 0.865981 | 3.98E-65 | -1.69E-46 |
| MS.gene055502 | MS.gene61145 | 0.895857 | 6.43E-76 | -1.69E-46 |
| MS.gene055577 | MS.gene61145 | 0.910914 | 1.10E-82 | -1.69E-46 |
| MS.gene055616 | MS.gene61145 | -0.822371 | 2.46E-53 | -1.69E-46 |
| MS.gene055719 | MS.gene61145 | -0.817352 | 3.45E-52 | -1.69E-46 |
| MS.gene055731 | MS.gene61145 | -0.804854 | 1.77E-49 | -1.69E-46 |
| MS.gene055741 | MS.gene61145 | 0.808225 | 3.44E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene61145 | 0.898942 | 3.23E-77 | -1.69E-46 |
| MS.gene055750 | MS.gene61145 | 0.872034 | 4.33E-67 | -1.69E-46 |
| MS.gene055751 | MS.gene61145 | 0.887928 | 9.27E-73 | -1.69E-46 |
| MS.gene05589 | MS.gene61145 | 0.920308 | 1.51E-87 | -1.69E-46 |
| MS.gene055941 | MS.gene61145 | 0.863517 | 2.35E-64 | -1.69E-46 |
| MS.gene056040 | MS.gene61145 | 0.863222 | 2.90E-64 | -1.69E-46 |
| MS.gene056166 | MS.gene61145 | 0.843175 | 1.65E-58 | -1.69E-46 |
| MS.gene056266 | MS.gene61145 | 0.827856 | 1.24E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene61145 | 0.802532 | 5.36E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene61145 | 0.83654 | 8.81E-57 | -1.69E-46 |
| MS.gene056409 | MS.gene61145 | 0.831889 | 1.29E-55 | -1.69E-46 |
| MS.gene056446 | MS.gene61145 | 0.813078 | 3.07E-51 | -1.69E-46 |
| MS.gene056450 | MS.gene61145 | 0.81456 | 1.45E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene61145 | 0.892722 | 1.22E-74 | -1.69E-46 |
| MS.gene056510 | MS.gene61145 | 0.883641 | 3.78E-71 | -1.69E-46 |
| MS.gene056550 | MS.gene61145 | -0.820703 | 5.96E-53 | -1.69E-46 |
| MS.gene056610 | MS.gene61145 | 0.855272 | 7.05E-62 | -1.69E-46 |
| MS.gene056657 | MS.gene61145 | 0.838314 | 3.10E-57 | -1.69E-46 |
| MS.gene056678 | MS.gene61145 | -0.800607 | 1.33E-48 | -1.69E-46 |
| MS.gene056692 | MS.gene61145 | 0.864518 | 1.15E-64 | -1.69E-46 |
| MS.gene056694 | MS.gene61145 | -0.828215 | 1.02E-54 | -1.69E-46 |
| MS.gene056877 | MS.gene61145 | 0.859283 | 4.60E-63 | -1.69E-46 |
| MS.gene056946 | MS.gene61145 | 0.819549 | 1.10E-52 | -1.69E-46 |
| MS.gene056988 | MS.gene61145 | -0.827859 | 1.24E-54 | -1.69E-46 |
| MS.gene057014 | MS.gene61145 | -0.810279 | 1.25E-50 | -1.69E-46 |
| MS.gene057019 | MS.gene61145 | 0.813465 | 2.53E-51 | -1.69E-46 |
| MS.gene057048 | MS.gene61145 | 0.818074 | 2.37E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene61145 | 0.813416 | 2.59E-51 | -1.69E-46 |
| MS.gene057086 | MS.gene61145 | 0.808849 | 2.53E-50 | -1.69E-46 |
| MS.gene057196 | MS.gene61145 | 0.82042 | 6.92E-53 | -1.69E-46 |
| MS.gene057332 | MS.gene61145 | 0.868995 | 4.31E-66 | -1.69E-46 |
| MS.gene057416 | MS.gene61145 | 0.814746 | 1.32E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene61145 | 0.903489 | 3.29E-79 | -1.69E-46 |
| MS.gene057768 | MS.gene61145 | -0.80132 | 9.52E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene61145 | 0.883722 | 3.53E-71 | -1.69E-46 |
| MS.gene057856 | MS.gene61145 | 0.81831 | 2.10E-52 | -1.69E-46 |
| MS.gene057857 | MS.gene61145 | 0.809951 | 1.47E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene61145 | 0.842336 | 2.75E-58 | -1.69E-46 |
| MS.gene058130 | MS.gene61145 | 0.803738 | 3.02E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene61145 | 0.839176 | 1.85E-57 | -1.69E-46 |
| MS.gene058334 | MS.gene61145 | -0.8588 | 6.42E-63 | -1.69E-46 |
| MS.gene058338 | MS.gene61145 | 0.85545 | 6.26E-62 | -1.69E-46 |
| MS.gene05837 | MS.gene61145 | 0.908451 | 1.69E-81 | -1.69E-46 |
| MS.gene058418 | MS.gene61145 | -0.862668 | 4.31E-64 | -1.69E-46 |
| MS.gene058419 | MS.gene61145 | 0.872021 | 4.38E-67 | -1.69E-46 |
| MS.gene058444 | MS.gene61145 | 0.814861 | 1.24E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene61145 | 0.886902 | 2.28E-72 | -1.69E-46 |
| MS.gene058603 | MS.gene61145 | -0.800544 | 1.37E-48 | -1.69E-46 |
| MS.gene058773 | MS.gene61145 | 0.861627 | 8.98E-64 | -1.69E-46 |
| MS.gene058838 | MS.gene61145 | 0.910555 | 1.64E-82 | -1.69E-46 |
| MS.gene05883 | MS.gene61145 | 0.805813 | 1.11E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene61145 | 0.869637 | 2.67E-66 | -1.69E-46 |
| MS.gene059023 | MS.gene61145 | 0.936222 | 2.45E-97 | -1.69E-46 |
| MS.gene059103 | MS.gene61145 | -0.866999 | 1.89E-65 | -1.69E-46 |
| MS.gene05912 | MS.gene61145 | 0.810293 | 1.24E-50 | -1.69E-46 |
| MS.gene05914 | MS.gene61145 | 0.89335 | 6.82E-75 | -1.69E-46 |
| MS.gene059303 | MS.gene61145 | 0.868548 | 6.02E-66 | -1.69E-46 |
| MS.gene05934 | MS.gene61145 | 0.818183 | 2.24E-52 | -1.69E-46 |
| MS.gene059480 | MS.gene61145 | -0.868141 | 8.14E-66 | -1.69E-46 |
| MS.gene059526 | MS.gene61145 | -0.822503 | 2.29E-53 | -1.69E-46 |
| MS.gene05960 | MS.gene61145 | -0.852363 | 4.85E-61 | -1.69E-46 |
| MS.gene059667 | MS.gene61145 | 0.856691 | 2.71E-62 | -1.69E-46 |
| MS.gene059677 | MS.gene61145 | 0.871179 | 8.32E-67 | -1.69E-46 |
| MS.gene059718 | MS.gene61145 | 0.875424 | 3.12E-68 | -1.69E-46 |
| MS.gene059756 | MS.gene61145 | 0.889519 | 2.25E-73 | -1.69E-46 |
| MS.gene059801 | MS.gene61145 | 0.851868 | 6.71E-61 | -1.69E-46 |
| MS.gene059837 | MS.gene61145 | 0.840422 | 8.78E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene61145 | 0.857854 | 1.23E-62 | -1.69E-46 |
| MS.gene05995 | MS.gene61145 | 0.801565 | 8.48E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene61145 | 0.841059 | 5.98E-58 | -1.69E-46 |
| MS.gene06000 | MS.gene61145 | 0.898847 | 3.55E-77 | -1.69E-46 |
| MS.gene060087 | MS.gene61145 | -0.809743 | 1.63E-50 | -1.69E-46 |
| MS.gene06027 | MS.gene61145 | 0.868425 | 6.60E-66 | -1.69E-46 |
| MS.gene060485 | MS.gene61145 | 0.80378 | 2.96E-49 | -1.69E-46 |
| MS.gene060593 | MS.gene61145 | -0.812645 | 3.82E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene61145 | -0.830536 | 2.78E-55 | -1.69E-46 |
| MS.gene060703 | MS.gene61145 | 0.842444 | 2.58E-58 | -1.69E-46 |
| MS.gene060762 | MS.gene61145 | 0.884155 | 2.44E-71 | -1.69E-46 |
| MS.gene060778 | MS.gene61145 | 0.860549 | 1.91E-63 | -1.69E-46 |
| MS.gene06077 | MS.gene61145 | 0.910543 | 1.67E-82 | -1.69E-46 |
| MS.gene06080 | MS.gene61145 | -0.806973 | 6.34E-50 | -1.69E-46 |
| MS.gene060823 | MS.gene61145 | -0.802001 | 6.90E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene61145 | 0.815776 | 7.77E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene61145 | 0.880181 | 6.78E-70 | -1.69E-46 |
| MS.gene060982 | MS.gene61145 | 0.906136 | 2.05E-80 | -1.69E-46 |
| MS.gene061044 | MS.gene61145 | -0.856636 | 2.81E-62 | -1.69E-46 |
| MS.gene061150 | MS.gene61145 | 0.876582 | 1.25E-68 | -1.69E-46 |
| MS.gene061231 | MS.gene61145 | 0.840148 | 1.03E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61145.t1 | MTR_4g097500 | 94.483 | 145 | 8 | 0 | 1 | 145 | 1 | 145 | 1.60e-100 | 288 |
| MS.gene61145.t1 | MTR_7g100540 | 29.801 | 151 | 94 | 4 | 2 | 145 | 4 | 149 | 2.91e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61145.t1 | AT5G65840 | 68.000 | 100 | 29 | 1 | 49 | 145 | 70 | 169 | 2.51e-43 | 144 |
| MS.gene61145.t1 | AT2G37240 | 32.632 | 95 | 62 | 1 | 51 | 145 | 54 | 146 | 3.49e-11 | 59.3 |
Find 37 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTGAAGGTATTAGATTT+TGG | 0.154519 | 8.1:+25097784 | None:intergenic |
| CTGTCATGTTCAAAGATCTT+TGG | 0.216394 | 8.1:-25097642 | MS.gene61145:CDS |
| AGGGGTAAGTGTGTGAATTC+GGG | 0.243170 | 8.1:+25097827 | None:intergenic |
| GAGGGGTAAGTGTGTGAATT+CGG | 0.256228 | 8.1:+25097826 | None:intergenic |
| AGCAAGAATACGAGCTTTAT+TGG | 0.271846 | 8.1:+25096729 | None:intergenic |
| GCAAGAATACGAGCTTTATT+GGG | 0.301563 | 8.1:+25096730 | None:intergenic |
| CAGAAAGAAGTCGTTTGTTT+CGG | 0.314726 | 8.1:+25097746 | None:intergenic |
| AGCTGCATCAAACCTTGATT+TGG | 0.325737 | 8.1:+25096786 | None:intergenic |
| TGTCATGTTCAAAGATCTTT+GGG | 0.351307 | 8.1:-25097641 | MS.gene61145:CDS |
| TGTTCTTCTTAGTTGGGAAC+TGG | 0.353355 | 8.1:-25096827 | MS.gene61145:intron |
| AGAAAGAAGTCGTTTGTTTC+GGG | 0.362238 | 8.1:+25097747 | None:intergenic |
| GTTCAAAGATCTTTGGGATC+AGG | 0.419236 | 8.1:-25097635 | MS.gene61145:CDS |
| AGATCTTTGGGATCAGGAAC+AGG | 0.458429 | 8.1:-25097629 | MS.gene61145:intron |
| CCCACTGTTGCAGAGAATCT+AGG | 0.472919 | 8.1:-25097697 | MS.gene61145:CDS |
| CATTGAAAGAATCCAAATCA+AGG | 0.492034 | 8.1:-25096798 | MS.gene61145:CDS |
| GCCGATGAATGAAGATTTGA+AGG | 0.493342 | 8.1:+25097771 | None:intergenic |
| TGGGGTGTAGTGAATGGTAG+AGG | 0.500971 | 8.1:+25097804 | None:intergenic |
| GGCACTTTGGATGCCCATGC+TGG | 0.513878 | 8.1:-25096934 | MS.gene61145:intron |
| ACCTTCAAATCTTCATTCAT+CGG | 0.522192 | 8.1:-25097772 | MS.gene61145:CDS |
| AAATCAAGGTTTGATGCAGC+TGG | 0.524810 | 8.1:-25096784 | MS.gene61145:CDS |
| AAGCTAATTGCAGTGGGCGT+TGG | 0.548964 | 8.1:-25096757 | MS.gene61145:CDS |
| GGGGTAAGTGTGTGAATTCG+GGG | 0.552268 | 8.1:+25097828 | None:intergenic |
| GGTGTGATAGATGGATGAAA+AGG | 0.565786 | 8.1:+25097850 | None:intergenic |
| AGATCATTAGTTACCAGCAT+GGG | 0.566257 | 8.1:+25096921 | None:intergenic |
| GCCTAGATTCTCTGCAACAG+TGG | 0.569349 | 8.1:+25097696 | None:intergenic |
| CAAGAATACGAGCTTTATTG+GGG | 0.569412 | 8.1:+25096731 | None:intergenic |
| GTGTAGTGAATGGTAGAGGA+GGG | 0.571659 | 8.1:+25097808 | None:intergenic |
| TGGTGTCAAGCTAATTGCAG+TGG | 0.616794 | 8.1:-25096764 | MS.gene61145:CDS |
| GGTGTAGTGAATGGTAGAGG+AGG | 0.617740 | 8.1:+25097807 | None:intergenic |
| CCTAGATTCTCTGCAACAGT+GGG | 0.622553 | 8.1:+25097697 | None:intergenic |
| ATTCTTACAGGGAATAGCTG+TGG | 0.623503 | 8.1:-25096969 | MS.gene61145:intron |
| AAGATCATTAGTTACCAGCA+TGG | 0.626138 | 8.1:+25096920 | None:intergenic |
| GGTGTCAAGCTAATTGCAGT+GGG | 0.627555 | 8.1:-25096763 | MS.gene61145:CDS |
| GGGTAAGTGTGTGAATTCGG+GGG | 0.635427 | 8.1:+25097829 | None:intergenic |
| CTTACAGGGAATAGCTGTGG+TGG | 0.639248 | 8.1:-25096966 | MS.gene61145:intron |
| TGTAGTGAATGGTAGAGGAG+GGG | 0.653187 | 8.1:+25097809 | None:intergenic |
| AAGAATACGAGCTTTATTGG+GGG | 0.731789 | 8.1:+25096732 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATAAAATAAAGTTAAAT+TGG | - | chr8.1:25097435-25097454 | MS.gene61145:intron | 10.0% |
| !! | ATTTATTATTTATCCAAGTA+AGG | + | chr8.1:25097358-25097377 | None:intergenic | 15.0% |
| !! | GAATTGAAATTAATTTATTC+TGG | - | chr8.1:25097248-25097267 | MS.gene61145:intron | 15.0% |
| !!! | TTTTACTCTTTAAATGTTTT+GGG | - | chr8.1:25097032-25097051 | MS.gene61145:intron | 15.0% |
| !!! | TTTTTACTCTTTAAATGTTT+TGG | - | chr8.1:25097031-25097050 | MS.gene61145:intron | 15.0% |
| !! | TACTAACTAGTTGAATTAAT+AGG | - | chr8.1:25097578-25097597 | MS.gene61145:intron | 20.0% |
| !!! | AATTAGTTGAAATTGATTTG+AGG | - | chr8.1:25097163-25097182 | MS.gene61145:intron | 20.0% |
| !!! | ATTTGAAGGTATTAGATTTT+GGG | + | chr8.1:25096821-25096840 | None:intergenic | 20.0% |
| !!! | TAGTTAGTATCTATTTTGAT+TGG | + | chr8.1:25097567-25097586 | None:intergenic | 20.0% |
| !!! | TAGTTGGAATTAATTCATTT+TGG | - | chr8.1:25097195-25097214 | MS.gene61145:intron | 20.0% |
| !!! | TTTTTTTTTGACCTAAATTG+TGG | - | chr8.1:25097069-25097088 | MS.gene61145:intron | 20.0% |
| ! | GATTAGAGTTAATTCTTACA+GGG | - | chr8.1:25097623-25097642 | MS.gene61145:intron | 25.0% |
| ! | TAAAGCAAAAACCACAATTT+AGG | + | chr8.1:25097083-25097102 | None:intergenic | 25.0% |
| ! | TGATTAGAGTTAATTCTTAC+AGG | - | chr8.1:25097622-25097641 | MS.gene61145:intron | 25.0% |
| !! | AAATTGTGGTTTTTGCTTTA+TGG | - | chr8.1:25097083-25097102 | MS.gene61145:intron | 25.0% |
| !! | ATTAATAACCAAAAGCACAA+AGG | + | chr8.1:25097711-25097730 | None:intergenic | 25.0% |
| !!! | AATAGGTTGATGTTAATATG+TGG | - | chr8.1:25097595-25097614 | MS.gene61145:intron | 25.0% |
| !!! | GATTTGAAGGTATTAGATTT+TGG | + | chr8.1:25096822-25096841 | None:intergenic | 25.0% |
| !!! | TTGTGCTTTTGGTTATTAAT+CGG | - | chr8.1:25097711-25097730 | MS.gene61145:CDS | 25.0% |
| !!! | TTTGAAGGTATTAGATTTTG+GGG | + | chr8.1:25096820-25096839 | None:intergenic | 25.0% |
| !!! | TTTGAGGTTGATATATTAGT+TGG | - | chr8.1:25097179-25097198 | MS.gene61145:intron | 25.0% |
| ACCTTCAAATCTTCATTCAT+CGG | - | chr8.1:25096831-25096850 | MS.gene61145:intron | 30.0% | |
| CATTGAAAGAATCCAAATCA+AGG | - | chr8.1:25097805-25097824 | MS.gene61145:CDS | 30.0% | |
| TCAACACAACATTAACAAAC+AGG | + | chr8.1:25097130-25097149 | None:intergenic | 30.0% | |
| TGTCATGTTCAAAGATCTTT+GGG | - | chr8.1:25096962-25096981 | MS.gene61145:CDS | 30.0% | |
| ! | AATAAGTTGAAACCAGCTTA+TGG | - | chr8.1:25097470-25097489 | MS.gene61145:intron | 30.0% |
| ! | TTTGAAGTTGTATCAGATCA+AGG | - | chr8.1:25097332-25097351 | MS.gene61145:intron | 30.0% |
| !! | ATAAGTTTTGTGAGGCTATT+TGG | + | chr8.1:25097521-25097540 | None:intergenic | 30.0% |
| !! | TAAGTTTTGTGAGGCTATTT+GGG | + | chr8.1:25097520-25097539 | None:intergenic | 30.0% |
| !! | TGTGCTTTTGGTTATTAATC+GGG | - | chr8.1:25097712-25097731 | MS.gene61145:CDS | 30.0% |
| AAGATCATTAGTTACCAGCA+TGG | + | chr8.1:25097686-25097705 | None:intergenic | 35.0% | |
| ACAACATTAACAAACAGGAG+GGG | + | chr8.1:25097125-25097144 | None:intergenic | 35.0% | |
| ACACAACATTAACAAACAGG+AGG | + | chr8.1:25097127-25097146 | None:intergenic | 35.0% | |
| ACTGATAGTTGTTCTTACTG+TGG | - | chr8.1:25097744-25097763 | MS.gene61145:CDS | 35.0% | |
| AGAAAGAAGTCGTTTGTTTC+GGG | + | chr8.1:25096859-25096878 | None:intergenic | 35.0% | |
| AGATCATTAGTTACCAGCAT+GGG | + | chr8.1:25097685-25097704 | None:intergenic | 35.0% | |
| CACAACATTAACAAACAGGA+GGG | + | chr8.1:25097126-25097145 | None:intergenic | 35.0% | |
| CAGAAAGAAGTCGTTTGTTT+CGG | + | chr8.1:25096860-25096879 | None:intergenic | 35.0% | |
| CTGTCATGTTCAAAGATCTT+TGG | - | chr8.1:25096961-25096980 | MS.gene61145:CDS | 35.0% | |
| GTCATACTTTACTTACCTAC+AGG | + | chr8.1:25097292-25097311 | None:intergenic | 35.0% | |
| GTCTTCTGTTCTTCTTAGTT+GGG | - | chr8.1:25097770-25097789 | MS.gene61145:CDS | 35.0% | |
| TGTCTTCTGTTCTTCTTAGT+TGG | - | chr8.1:25097769-25097788 | MS.gene61145:CDS | 35.0% | |
| ! | AGCAAGAATACGAGCTTTAT+TGG | + | chr8.1:25097877-25097896 | None:intergenic | 35.0% |
| ! | GGTTGATGTTAATATGTGGT+TGG | - | chr8.1:25097599-25097618 | MS.gene61145:intron | 35.0% |
| ! | TTAGTATTTTCACTGCTGCT+GGG | - | chr8.1:25096934-25096953 | MS.gene61145:intron | 35.0% |
| !! | AAGAATACGAGCTTTATTGG+GGG | + | chr8.1:25097874-25097893 | None:intergenic | 35.0% |
| !! | CAAGAATACGAGCTTTATTG+GGG | + | chr8.1:25097875-25097894 | None:intergenic | 35.0% |
| !! | CTACTGACATAAGTTTTGTG+AGG | + | chr8.1:25097529-25097548 | None:intergenic | 35.0% |
| !! | GCAAGAATACGAGCTTTATT+GGG | + | chr8.1:25097876-25097895 | None:intergenic | 35.0% |
| AAATCAAGGTTTGATGCAGC+TGG | - | chr8.1:25097819-25097838 | MS.gene61145:CDS | 40.0% | |
| AACAGACATTGTCCATAAGC+TGG | + | chr8.1:25097485-25097504 | None:intergenic | 40.0% | |
| AGCTGCATCAAACCTTGATT+TGG | + | chr8.1:25097820-25097839 | None:intergenic | 40.0% | |
| ATTCTTACAGGGAATAGCTG+TGG | - | chr8.1:25097634-25097653 | MS.gene61145:CDS | 40.0% | |
| GCCGATGAATGAAGATTTGA+AGG | + | chr8.1:25096835-25096854 | None:intergenic | 40.0% | |
| GGTGTGATAGATGGATGAAA+AGG | + | chr8.1:25096756-25096775 | None:intergenic | 40.0% | |
| TATCAGATCAAGGCCTTACT+TGG | - | chr8.1:25097342-25097361 | MS.gene61145:intron | 40.0% | |
| TGTTCTTCTTAGTTGGGAAC+TGG | - | chr8.1:25097776-25097795 | MS.gene61145:CDS | 40.0% | |
| ! | GATCTTTGCCTTTGTGCTTT+TGG | - | chr8.1:25097700-25097719 | MS.gene61145:CDS | 40.0% |
| ! | GTTAGTATTTTCACTGCTGC+TGG | - | chr8.1:25096933-25096952 | MS.gene61145:intron | 40.0% |
| ! | TAGTATTTTCACTGCTGCTG+GGG | - | chr8.1:25096935-25096954 | MS.gene61145:CDS | 40.0% |
| ! | TCTGGTGTTAACCTAGTGTT+TGG | - | chr8.1:25097266-25097285 | MS.gene61145:intron | 40.0% |
| !! | GTTCAAAGATCTTTGGGATC+AGG | - | chr8.1:25096968-25096987 | MS.gene61145:intron | 40.0% |
| !!! | AGATTTTGGGGTGTAGTGAA+TGG | + | chr8.1:25096808-25096827 | None:intergenic | 40.0% |
| AGGGGTAAGTGTGTGAATTC+GGG | + | chr8.1:25096779-25096798 | None:intergenic | 45.0% | |
| CCTAGATTCTCTGCAACAGT+GGG | + | chr8.1:25096909-25096928 | None:intergenic | 45.0% | |
| GAGGGGTAAGTGTGTGAATT+CGG | + | chr8.1:25096780-25096799 | None:intergenic | 45.0% | |
| GGTGTCAAGCTAATTGCAGT+GGG | - | chr8.1:25097840-25097859 | MS.gene61145:CDS | 45.0% | |
| GTGTAGTGAATGGTAGAGGA+GGG | + | chr8.1:25096798-25096817 | None:intergenic | 45.0% | |
| TAACCTAGTGTTTGGCCTGT+AGG | - | chr8.1:25097274-25097293 | MS.gene61145:intron | 45.0% | |
| TGTAGTGAATGGTAGAGGAG+GGG | + | chr8.1:25096797-25096816 | None:intergenic | 45.0% | |
| TTACCTACAGGCCAAACACT+AGG | + | chr8.1:25097280-25097299 | None:intergenic | 45.0% | |
| ! | TAGCTGTGGTGGCACTTTTA+AGG | - | chr8.1:25097648-25097667 | MS.gene61145:CDS | 45.0% |
| ! | TGGTGTCAAGCTAATTGCAG+TGG | - | chr8.1:25097839-25097858 | MS.gene61145:CDS | 45.0% |
| !! | AGATCTTTGGGATCAGGAAC+AGG | - | chr8.1:25096974-25096993 | MS.gene61145:intron | 45.0% |
| !!! | GTGGCACTTTTAAGGCACTT+TGG | - | chr8.1:25097656-25097675 | MS.gene61145:CDS | 45.0% |
| AAGCTAATTGCAGTGGGCGT+TGG | - | chr8.1:25097846-25097865 | MS.gene61145:CDS | 50.0% | |
| CCCACTGTTGCAGAGAATCT+AGG | - | chr8.1:25096906-25096925 | MS.gene61145:intron | 50.0% | |
| CTTACAGGGAATAGCTGTGG+TGG | - | chr8.1:25097637-25097656 | MS.gene61145:CDS | 50.0% | |
| GCCTAGATTCTCTGCAACAG+TGG | + | chr8.1:25096910-25096929 | None:intergenic | 50.0% | |
| GGATCAGGAACAGGTCAGAA+TGG | - | chr8.1:25096983-25097002 | MS.gene61145:intron | 50.0% | |
| GGGGTAAGTGTGTGAATTCG+GGG | + | chr8.1:25096778-25096797 | None:intergenic | 50.0% | |
| GGGTAAGTGTGTGAATTCGG+GGG | + | chr8.1:25096777-25096796 | None:intergenic | 50.0% | |
| GGTGTAGTGAATGGTAGAGG+AGG | + | chr8.1:25096799-25096818 | None:intergenic | 50.0% | |
| TGGGGTGTAGTGAATGGTAG+AGG | + | chr8.1:25096802-25096821 | None:intergenic | 50.0% | |
| ! | GAATTCGGGGGTGTGATAGA+TGG | + | chr8.1:25096765-25096784 | None:intergenic | 50.0% |
| GGCACTTTGGATGCCCATGC+TGG | - | chr8.1:25097669-25097688 | MS.gene61145:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 25096723 | 25097902 | 25096723 | ID=MS.gene61145 |
| chr8.1 | mRNA | 25096723 | 25097902 | 25096723 | ID=MS.gene61145.t1;Parent=MS.gene61145 |
| chr8.1 | exon | 25097630 | 25097902 | 25097630 | ID=MS.gene61145.t1.exon1;Parent=MS.gene61145.t1 |
| chr8.1 | CDS | 25097630 | 25097902 | 25097630 | ID=cds.MS.gene61145.t1;Parent=MS.gene61145.t1 |
| chr8.1 | exon | 25096935 | 25096981 | 25096935 | ID=MS.gene61145.t1.exon2;Parent=MS.gene61145.t1 |
| chr8.1 | CDS | 25096935 | 25096981 | 25096935 | ID=cds.MS.gene61145.t1;Parent=MS.gene61145.t1 |
| chr8.1 | exon | 25096723 | 25096837 | 25096723 | ID=MS.gene61145.t1.exon3;Parent=MS.gene61145.t1 |
| chr8.1 | CDS | 25096723 | 25096837 | 25096723 | ID=cds.MS.gene61145.t1;Parent=MS.gene61145.t1 |
| Gene Sequence |
| Protein sequence |
