Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065675.t1 | XP_013470086.1 | 97.6 | 254 | 6 | 0 | 1 | 254 | 1 | 254 | 5.40E-140 | 506.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065675.t1 | Q94JT5 | 80.8 | 229 | 44 | 0 | 24 | 252 | 43 | 271 | 5.2e-107 | 388.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065675.t1 | I3SIK3 | 97.6 | 254 | 6 | 0 | 1 | 254 | 1 | 254 | 3.9e-140 | 506.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene065675 | 0.811254 | 7.68E-51 | -1.69E-46 |
MS.gene049171 | MS.gene065675 | 0.907289 | 5.95E-81 | -1.69E-46 |
MS.gene049173 | MS.gene065675 | 0.819157 | 1.35E-52 | -1.69E-46 |
MS.gene049217 | MS.gene065675 | 0.843835 | 1.10E-58 | -1.69E-46 |
MS.gene049222 | MS.gene065675 | 0.910786 | 1.27E-82 | -1.69E-46 |
MS.gene049232 | MS.gene065675 | 0.856508 | 3.07E-62 | -1.69E-46 |
MS.gene049285 | MS.gene065675 | 0.878614 | 2.43E-69 | -1.69E-46 |
MS.gene049312 | MS.gene065675 | -0.802296 | 6.00E-49 | -1.69E-46 |
MS.gene049320 | MS.gene065675 | 0.872351 | 3.40E-67 | -1.69E-46 |
MS.gene04939 | MS.gene065675 | 0.82933 | 5.47E-55 | -1.69E-46 |
MS.gene049609 | MS.gene065675 | 0.875701 | 2.50E-68 | -1.69E-46 |
MS.gene049627 | MS.gene065675 | 0.815053 | 1.13E-51 | -1.69E-46 |
MS.gene049633 | MS.gene065675 | 0.89562 | 8.06E-76 | -1.69E-46 |
MS.gene049805 | MS.gene065675 | 0.833103 | 6.46E-56 | -1.69E-46 |
MS.gene049865 | MS.gene065675 | 0.847001 | 1.52E-59 | -1.69E-46 |
MS.gene05010 | MS.gene065675 | 0.858681 | 6.97E-63 | -1.69E-46 |
MS.gene050163 | MS.gene065675 | 0.849671 | 2.78E-60 | -1.69E-46 |
MS.gene050165 | MS.gene065675 | 0.852099 | 5.76E-61 | -1.69E-46 |
MS.gene050170 | MS.gene065675 | 0.915402 | 6.14E-85 | -1.69E-46 |
MS.gene050216 | MS.gene065675 | 0.809496 | 1.84E-50 | -1.69E-46 |
MS.gene050323 | MS.gene065675 | 0.89019 | 1.23E-73 | -1.69E-46 |
MS.gene050333 | MS.gene065675 | 0.836084 | 1.15E-56 | -1.69E-46 |
MS.gene050338 | MS.gene065675 | -0.828692 | 7.80E-55 | -1.69E-46 |
MS.gene050381 | MS.gene065675 | -0.815507 | 8.92E-52 | -1.69E-46 |
MS.gene050444 | MS.gene065675 | 0.838569 | 2.66E-57 | -1.69E-46 |
MS.gene050496 | MS.gene065675 | 0.885828 | 5.80E-72 | -1.69E-46 |
MS.gene050504 | MS.gene065675 | 0.901045 | 3.98E-78 | -1.69E-46 |
MS.gene050518 | MS.gene065675 | 0.861516 | 9.71E-64 | -1.69E-46 |
MS.gene050538 | MS.gene065675 | 0.840405 | 8.87E-58 | -1.69E-46 |
MS.gene050553 | MS.gene065675 | 0.810302 | 1.23E-50 | -1.69E-46 |
MS.gene050577 | MS.gene065675 | 0.905221 | 5.40E-80 | -1.69E-46 |
MS.gene050593 | MS.gene065675 | 0.810839 | 9.44E-51 | -1.69E-46 |
MS.gene050612 | MS.gene065675 | 0.89399 | 3.75E-75 | -1.69E-46 |
MS.gene050675 | MS.gene065675 | 0.870762 | 1.14E-66 | -1.69E-46 |
MS.gene050699 | MS.gene065675 | 0.878006 | 3.98E-69 | -1.69E-46 |
MS.gene050747 | MS.gene065675 | 0.888172 | 7.47E-73 | -1.69E-46 |
MS.gene050772 | MS.gene065675 | 0.874019 | 9.37E-68 | -1.69E-46 |
MS.gene05080 | MS.gene065675 | 0.901562 | 2.36E-78 | -1.69E-46 |
MS.gene05081 | MS.gene065675 | 0.863261 | 2.82E-64 | -1.69E-46 |
MS.gene050868 | MS.gene065675 | 0.913616 | 5.00E-84 | -1.69E-46 |
MS.gene050871 | MS.gene065675 | 0.912538 | 1.74E-83 | -1.69E-46 |
MS.gene050876 | MS.gene065675 | 0.842053 | 3.27E-58 | -1.69E-46 |
MS.gene050904 | MS.gene065675 | 0.898372 | 5.66E-77 | -1.69E-46 |
MS.gene050950 | MS.gene065675 | 0.87553 | 2.86E-68 | -1.69E-46 |
MS.gene050986 | MS.gene065675 | 0.873971 | 9.72E-68 | -1.69E-46 |
MS.gene05100 | MS.gene065675 | 0.819922 | 9.01E-53 | -1.69E-46 |
MS.gene051044 | MS.gene065675 | -0.812555 | 4.00E-51 | -1.69E-46 |
MS.gene051138 | MS.gene065675 | -0.814438 | 1.54E-51 | -1.69E-46 |
MS.gene051268 | MS.gene065675 | 0.853061 | 3.07E-61 | -1.69E-46 |
MS.gene051317 | MS.gene065675 | 0.876014 | 1.95E-68 | -1.69E-46 |
MS.gene051364 | MS.gene065675 | -0.81115 | 8.08E-51 | -1.69E-46 |
MS.gene051366 | MS.gene065675 | -0.802696 | 4.96E-49 | -1.69E-46 |
MS.gene051439 | MS.gene065675 | -0.815066 | 1.12E-51 | -1.69E-46 |
MS.gene051551 | MS.gene065675 | 0.834 | 3.86E-56 | -1.69E-46 |
MS.gene051651 | MS.gene065675 | -0.818744 | 1.67E-52 | -1.69E-46 |
MS.gene051666 | MS.gene065675 | 0.817655 | 2.95E-52 | -1.69E-46 |
MS.gene051694 | MS.gene065675 | 0.811127 | 8.18E-51 | -1.69E-46 |
MS.gene051734 | MS.gene065675 | 0.825126 | 5.56E-54 | -1.69E-46 |
MS.gene051810 | MS.gene065675 | 0.826624 | 2.45E-54 | -1.69E-46 |
MS.gene051838 | MS.gene065675 | 0.901819 | 1.82E-78 | -1.69E-46 |
MS.gene051858 | MS.gene065675 | 0.831155 | 1.96E-55 | -1.69E-46 |
MS.gene051874 | MS.gene065675 | 0.822718 | 2.04E-53 | -1.69E-46 |
MS.gene051941 | MS.gene065675 | 0.831994 | 1.22E-55 | -1.69E-46 |
MS.gene051946 | MS.gene065675 | -0.802832 | 4.65E-49 | -1.69E-46 |
MS.gene052015 | MS.gene065675 | -0.812289 | 4.57E-51 | -1.69E-46 |
MS.gene052066 | MS.gene065675 | 0.82117 | 4.66E-53 | -1.69E-46 |
MS.gene052129 | MS.gene065675 | -0.805966 | 1.03E-49 | -1.69E-46 |
MS.gene052164 | MS.gene065675 | 0.918257 | 1.95E-86 | -1.69E-46 |
MS.gene052346 | MS.gene065675 | 0.80478 | 1.83E-49 | -1.69E-46 |
MS.gene052482 | MS.gene065675 | 0.881617 | 2.07E-70 | -1.69E-46 |
MS.gene052486 | MS.gene065675 | 0.887385 | 1.49E-72 | -1.69E-46 |
MS.gene052494 | MS.gene065675 | -0.847399 | 1.19E-59 | -1.69E-46 |
MS.gene052501 | MS.gene065675 | 0.834862 | 2.34E-56 | -1.69E-46 |
MS.gene052503 | MS.gene065675 | 0.898874 | 3.46E-77 | -1.69E-46 |
MS.gene052505 | MS.gene065675 | 0.809718 | 1.65E-50 | -1.69E-46 |
MS.gene052506 | MS.gene065675 | 0.847762 | 9.42E-60 | -1.69E-46 |
MS.gene052606 | MS.gene065675 | -0.821551 | 3.80E-53 | -1.69E-46 |
MS.gene052615 | MS.gene065675 | 0.869488 | 2.98E-66 | -1.69E-46 |
MS.gene052822 | MS.gene065675 | 0.845485 | 3.94E-59 | -1.69E-46 |
MS.gene052823 | MS.gene065675 | 0.895346 | 1.05E-75 | -1.69E-46 |
MS.gene052825 | MS.gene065675 | 0.897216 | 1.74E-76 | -1.69E-46 |
MS.gene052870 | MS.gene065675 | 0.817838 | 2.68E-52 | -1.69E-46 |
MS.gene052872 | MS.gene065675 | 0.83668 | 8.12E-57 | -1.69E-46 |
MS.gene052916 | MS.gene065675 | 0.800317 | 1.53E-48 | -1.69E-46 |
MS.gene052966 | MS.gene065675 | 0.906596 | 1.25E-80 | -1.69E-46 |
MS.gene052982 | MS.gene065675 | 0.806585 | 7.66E-50 | -1.69E-46 |
MS.gene052986 | MS.gene065675 | 0.808551 | 2.93E-50 | -1.69E-46 |
MS.gene052987 | MS.gene065675 | 0.813132 | 2.99E-51 | -1.69E-46 |
MS.gene053117 | MS.gene065675 | 0.827971 | 1.17E-54 | -1.69E-46 |
MS.gene053203 | MS.gene065675 | 0.904265 | 1.47E-79 | -1.69E-46 |
MS.gene053207 | MS.gene065675 | 0.851394 | 9.13E-61 | -1.69E-46 |
MS.gene053213 | MS.gene065675 | 0.856009 | 4.30E-62 | -1.69E-46 |
MS.gene053286 | MS.gene065675 | 0.858775 | 6.53E-63 | -1.69E-46 |
MS.gene053420 | MS.gene065675 | -0.809569 | 1.77E-50 | -1.69E-46 |
MS.gene053421 | MS.gene065675 | -0.820025 | 8.53E-53 | -1.69E-46 |
MS.gene053436 | MS.gene065675 | 0.858725 | 6.76E-63 | -1.69E-46 |
MS.gene053479 | MS.gene065675 | 0.855202 | 7.39E-62 | -1.69E-46 |
MS.gene053480 | MS.gene065675 | 0.878612 | 2.44E-69 | -1.69E-46 |
MS.gene053574 | MS.gene065675 | 0.871644 | 5.84E-67 | -1.69E-46 |
MS.gene053626 | MS.gene065675 | 0.877597 | 5.53E-69 | -1.69E-46 |
MS.gene053632 | MS.gene065675 | 0.879731 | 9.81E-70 | -1.69E-46 |
MS.gene053633 | MS.gene065675 | 0.823964 | 1.04E-53 | -1.69E-46 |
MS.gene053824 | MS.gene065675 | 0.897844 | 9.48E-77 | -1.69E-46 |
MS.gene053916 | MS.gene065675 | 0.838121 | 3.47E-57 | -1.69E-46 |
MS.gene053997 | MS.gene065675 | 0.807856 | 4.12E-50 | -1.69E-46 |
MS.gene054003 | MS.gene065675 | 0.83918 | 1.85E-57 | -1.69E-46 |
MS.gene054344 | MS.gene065675 | 0.838991 | 2.07E-57 | -1.69E-46 |
MS.gene054408 | MS.gene065675 | 0.863285 | 2.78E-64 | -1.69E-46 |
MS.gene054595 | MS.gene065675 | 0.87839 | 2.92E-69 | -1.69E-46 |
MS.gene054600 | MS.gene065675 | 0.888466 | 5.76E-73 | -1.69E-46 |
MS.gene054642 | MS.gene065675 | 0.851927 | 6.45E-61 | -1.69E-46 |
MS.gene054706 | MS.gene065675 | -0.861589 | 9.23E-64 | -1.69E-46 |
MS.gene054707 | MS.gene065675 | -0.818496 | 1.90E-52 | -1.69E-46 |
MS.gene05470 | MS.gene065675 | 0.920615 | 1.02E-87 | -1.69E-46 |
MS.gene054851 | MS.gene065675 | -0.823107 | 1.65E-53 | -1.69E-46 |
MS.gene054884 | MS.gene065675 | -0.813254 | 2.81E-51 | -1.69E-46 |
MS.gene054927 | MS.gene065675 | 0.859239 | 4.74E-63 | -1.69E-46 |
MS.gene05494 | MS.gene065675 | 0.84101 | 6.16E-58 | -1.69E-46 |
MS.gene054954 | MS.gene065675 | 0.884216 | 2.32E-71 | -1.69E-46 |
MS.gene055206 | MS.gene065675 | 0.846603 | 1.96E-59 | -1.69E-46 |
MS.gene055224 | MS.gene065675 | 0.836597 | 8.53E-57 | -1.69E-46 |
MS.gene055289 | MS.gene065675 | 0.831192 | 1.92E-55 | -1.69E-46 |
MS.gene055362 | MS.gene065675 | 0.88462 | 1.64E-71 | -1.69E-46 |
MS.gene055502 | MS.gene065675 | 0.905015 | 6.70E-80 | -1.69E-46 |
MS.gene055577 | MS.gene065675 | 0.917401 | 5.55E-86 | -1.69E-46 |
MS.gene055616 | MS.gene065675 | -0.816036 | 6.80E-52 | -1.69E-46 |
MS.gene055722 | MS.gene065675 | 0.836175 | 1.09E-56 | -1.69E-46 |
MS.gene055731 | MS.gene065675 | -0.81222 | 4.73E-51 | -1.69E-46 |
MS.gene055741 | MS.gene065675 | 0.806342 | 8.62E-50 | -1.69E-46 |
MS.gene055748 | MS.gene065675 | 0.90892 | 1.01E-81 | -1.69E-46 |
MS.gene055750 | MS.gene065675 | 0.899732 | 1.48E-77 | -1.69E-46 |
MS.gene055751 | MS.gene065675 | 0.906366 | 1.60E-80 | -1.69E-46 |
MS.gene055776 | MS.gene065675 | 0.849799 | 2.56E-60 | -1.69E-46 |
MS.gene05589 | MS.gene065675 | 0.942133 | 1.23E-101 | -1.69E-46 |
MS.gene055941 | MS.gene065675 | 0.858386 | 8.54E-63 | -1.69E-46 |
MS.gene056040 | MS.gene065675 | 0.839754 | 1.31E-57 | -1.69E-46 |
MS.gene056046 | MS.gene065675 | 0.855413 | 6.42E-62 | -1.69E-46 |
MS.gene056166 | MS.gene065675 | 0.867952 | 9.36E-66 | -1.69E-46 |
MS.gene056266 | MS.gene065675 | 0.808351 | 3.23E-50 | -1.69E-46 |
MS.gene056283 | MS.gene065675 | 0.847851 | 8.90E-60 | -1.69E-46 |
MS.gene056374 | MS.gene065675 | 0.807944 | 3.95E-50 | -1.69E-46 |
MS.gene056387 | MS.gene065675 | 0.871527 | 6.39E-67 | -1.69E-46 |
MS.gene056409 | MS.gene065675 | 0.821864 | 3.22E-53 | -1.69E-46 |
MS.gene056446 | MS.gene065675 | 0.845194 | 4.73E-59 | -1.69E-46 |
MS.gene056449 | MS.gene065675 | 0.812955 | 3.27E-51 | -1.69E-46 |
MS.gene056450 | MS.gene065675 | 0.811245 | 7.71E-51 | -1.69E-46 |
MS.gene056504 | MS.gene065675 | 0.925946 | 9.19E-91 | -1.69E-46 |
MS.gene056510 | MS.gene065675 | 0.898728 | 3.99E-77 | -1.69E-46 |
MS.gene056550 | MS.gene065675 | -0.800798 | 1.22E-48 | -1.69E-46 |
MS.gene056610 | MS.gene065675 | 0.846952 | 1.57E-59 | -1.69E-46 |
MS.gene056618 | MS.gene065675 | -0.812932 | 3.31E-51 | -1.69E-46 |
MS.gene056657 | MS.gene065675 | 0.86935 | 3.31E-66 | -1.69E-46 |
MS.gene056692 | MS.gene065675 | 0.874853 | 4.88E-68 | -1.69E-46 |
MS.gene056694 | MS.gene065675 | -0.812469 | 4.17E-51 | -1.69E-46 |
MS.gene056878 | MS.gene065675 | 0.827707 | 1.35E-54 | -1.69E-46 |
MS.gene056946 | MS.gene065675 | 0.818014 | 2.44E-52 | -1.69E-46 |
MS.gene057014 | MS.gene065675 | -0.817672 | 2.92E-52 | -1.69E-46 |
MS.gene057048 | MS.gene065675 | 0.813661 | 2.29E-51 | -1.69E-46 |
MS.gene057076 | MS.gene065675 | 0.860782 | 1.62E-63 | -1.69E-46 |
MS.gene057086 | MS.gene065675 | 0.834248 | 3.35E-56 | -1.69E-46 |
MS.gene057332 | MS.gene065675 | 0.811403 | 7.12E-51 | -1.69E-46 |
MS.gene057416 | MS.gene065675 | 0.817054 | 4.02E-52 | -1.69E-46 |
MS.gene057658 | MS.gene065675 | 0.871463 | 6.71E-67 | -1.69E-46 |
MS.gene057734 | MS.gene065675 | 0.835201 | 1.93E-56 | -1.69E-46 |
MS.gene057831 | MS.gene065675 | 0.877523 | 5.87E-69 | -1.69E-46 |
MS.gene057856 | MS.gene065675 | 0.834607 | 2.72E-56 | -1.69E-46 |
MS.gene057857 | MS.gene065675 | 0.857431 | 1.64E-62 | -1.69E-46 |
MS.gene057872 | MS.gene065675 | 0.808774 | 2.62E-50 | -1.69E-46 |
MS.gene05787 | MS.gene065675 | 0.864078 | 1.57E-64 | -1.69E-46 |
MS.gene058130 | MS.gene065675 | 0.836623 | 8.39E-57 | -1.69E-46 |
MS.gene058157 | MS.gene065675 | 0.857438 | 1.63E-62 | -1.69E-46 |
MS.gene058171 | MS.gene065675 | -0.811973 | 5.36E-51 | -1.69E-46 |
MS.gene058173 | MS.gene065675 | -0.802672 | 5.02E-49 | -1.69E-46 |
MS.gene058175 | MS.gene065675 | -0.811141 | 8.12E-51 | -1.69E-46 |
MS.gene058334 | MS.gene065675 | -0.868552 | 6.00E-66 | -1.69E-46 |
MS.gene058338 | MS.gene065675 | 0.853782 | 1.90E-61 | -1.69E-46 |
MS.gene05837 | MS.gene065675 | 0.888708 | 4.64E-73 | -1.69E-46 |
MS.gene058382 | MS.gene065675 | -0.804363 | 2.24E-49 | -1.69E-46 |
MS.gene058419 | MS.gene065675 | 0.883379 | 4.72E-71 | -1.69E-46 |
MS.gene058448 | MS.gene065675 | 0.81003 | 1.41E-50 | -1.69E-46 |
MS.gene058544 | MS.gene065675 | 0.879509 | 1.18E-69 | -1.69E-46 |
MS.gene058723 | MS.gene065675 | 0.825978 | 3.49E-54 | -1.69E-46 |
MS.gene058773 | MS.gene065675 | 0.880561 | 4.96E-70 | -1.69E-46 |
MS.gene058838 | MS.gene065675 | 0.910333 | 2.11E-82 | -1.69E-46 |
MS.gene059022 | MS.gene065675 | 0.887797 | 1.04E-72 | -1.69E-46 |
MS.gene059023 | MS.gene065675 | 0.917061 | 8.40E-86 | -1.69E-46 |
MS.gene059103 | MS.gene065675 | -0.802379 | 5.77E-49 | -1.69E-46 |
MS.gene05912 | MS.gene065675 | 0.810432 | 1.16E-50 | -1.69E-46 |
MS.gene05913 | MS.gene065675 | 0.837401 | 5.31E-57 | -1.69E-46 |
MS.gene05914 | MS.gene065675 | 0.860903 | 1.49E-63 | -1.69E-46 |
MS.gene059303 | MS.gene065675 | 0.816923 | 4.31E-52 | -1.69E-46 |
MS.gene05934 | MS.gene065675 | 0.823182 | 1.59E-53 | -1.69E-46 |
MS.gene059367 | MS.gene065675 | 0.834758 | 2.49E-56 | -1.69E-46 |
MS.gene059480 | MS.gene065675 | -0.803185 | 3.93E-49 | -1.69E-46 |
MS.gene059526 | MS.gene065675 | -0.830778 | 2.43E-55 | -1.69E-46 |
MS.gene05960 | MS.gene065675 | -0.856266 | 3.61E-62 | -1.69E-46 |
MS.gene059667 | MS.gene065675 | 0.89516 | 1.25E-75 | -1.69E-46 |
MS.gene059677 | MS.gene065675 | 0.884653 | 1.60E-71 | -1.69E-46 |
MS.gene059703 | MS.gene065675 | -0.810792 | 9.67E-51 | -1.69E-46 |
MS.gene059718 | MS.gene065675 | 0.892466 | 1.55E-74 | -1.69E-46 |
MS.gene059756 | MS.gene065675 | 0.844561 | 7.01E-59 | -1.69E-46 |
MS.gene059801 | MS.gene065675 | 0.866797 | 2.19E-65 | -1.69E-46 |
MS.gene059837 | MS.gene065675 | 0.85604 | 4.21E-62 | -1.69E-46 |
MS.gene059865 | MS.gene065675 | 0.90312 | 4.82E-79 | -1.69E-46 |
MS.gene059902 | MS.gene065675 | 0.821791 | 3.35E-53 | -1.69E-46 |
MS.gene05995 | MS.gene065675 | 0.824587 | 7.45E-54 | -1.69E-46 |
MS.gene05996 | MS.gene065675 | 0.849316 | 3.50E-60 | -1.69E-46 |
MS.gene06000 | MS.gene065675 | 0.891137 | 5.23E-74 | -1.69E-46 |
MS.gene06027 | MS.gene065675 | 0.860958 | 1.44E-63 | -1.69E-46 |
MS.gene060295 | MS.gene065675 | 0.837403 | 5.31E-57 | -1.69E-46 |
MS.gene060482 | MS.gene065675 | 0.813831 | 2.10E-51 | -1.69E-46 |
MS.gene060593 | MS.gene065675 | -0.814115 | 1.82E-51 | -1.69E-46 |
MS.gene060595 | MS.gene065675 | -0.863991 | 1.68E-64 | -1.69E-46 |
MS.gene060703 | MS.gene065675 | 0.866309 | 3.13E-65 | -1.69E-46 |
MS.gene060762 | MS.gene065675 | 0.917032 | 8.69E-86 | -1.69E-46 |
MS.gene060778 | MS.gene065675 | 0.895176 | 1.23E-75 | -1.69E-46 |
MS.gene06077 | MS.gene065675 | 0.901655 | 2.15E-78 | -1.69E-46 |
MS.gene060823 | MS.gene065675 | -0.828134 | 1.06E-54 | -1.69E-46 |
MS.gene060835 | MS.gene065675 | 0.833348 | 5.62E-56 | -1.69E-46 |
MS.gene06092 | MS.gene065675 | 0.853911 | 1.75E-61 | -1.69E-46 |
MS.gene06097 | MS.gene065675 | 0.835592 | 1.53E-56 | -1.69E-46 |
MS.gene060982 | MS.gene065675 | 0.926202 | 6.48E-91 | -1.69E-46 |
MS.gene061044 | MS.gene065675 | -0.848969 | 4.37E-60 | -1.69E-46 |
MS.gene061150 | MS.gene065675 | 0.858417 | 8.36E-63 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065675.t1 | MTR_1g107525 | 97.638 | 254 | 6 | 0 | 1 | 254 | 1 | 254 | 0.0 | 510 |
MS.gene065675.t1 | MTR_1g107525 | 97.884 | 189 | 4 | 0 | 1 | 189 | 1 | 189 | 4.39e-137 | 384 |
MS.gene065675.t1 | MTR_1g107510 | 75.771 | 227 | 55 | 0 | 26 | 252 | 43 | 269 | 1.08e-123 | 353 |
MS.gene065675.t1 | MTR_1g107510 | 70.157 | 191 | 49 | 1 | 7 | 189 | 16 | 206 | 3.70e-88 | 260 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065675.t1 | AT4G35220 | 80.786 | 229 | 44 | 0 | 24 | 252 | 43 | 271 | 3.77e-139 | 392 |
MS.gene065675.t1 | AT4G34180 | 68.966 | 232 | 71 | 1 | 23 | 253 | 24 | 255 | 7.76e-117 | 335 |
MS.gene065675.t1 | AT1G44542 | 65.306 | 245 | 83 | 2 | 10 | 253 | 28 | 271 | 5.69e-115 | 330 |
Find 61 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGGGACATCATCAAGTTTC+AGG | 0.182140 | 1.4:-82952204 | None:intergenic |
CAGTCCATTGCTTACCTCTT+AGG | 0.209663 | 1.4:+82952239 | MS.gene065675:CDS |
ATGCATTCTAATCAAGTATT+AGG | 0.250536 | 1.4:+82952291 | MS.gene065675:CDS |
TGCTTACCTCTTAGGTTGGC+TGG | 0.313330 | 1.4:+82952247 | MS.gene065675:CDS |
GTCTCAAAAGCTGGCATGTC+TGG | 0.322806 | 1.4:-82948000 | None:intergenic |
TTCCATTGTCGTATACTTCC+CGG | 0.343600 | 1.4:-82947948 | None:intergenic |
CCAAGAGATTCTAATATAAC+TGG | 0.371707 | 1.4:+82948336 | MS.gene065675:CDS |
CTCGACTTGCACGTCCTCAA+TGG | 0.395006 | 1.4:+82948186 | MS.gene065675:CDS |
ACCTGTCGGTATTCAATGTT+CGG | 0.395211 | 1.4:-82949405 | None:intergenic |
TTCGATCATTACTTCGATGC+TGG | 0.405597 | 1.4:+82948147 | MS.gene065675:CDS |
AACACTGATATTAAACTTGT+TGG | 0.407040 | 1.4:+82950028 | MS.gene065675:CDS |
GAGTACACGCTTTACACCTC+TGG | 0.430957 | 1.4:-82949380 | None:intergenic |
CCATTGCTTACCTCTTAGGT+TGG | 0.432052 | 1.4:+82952243 | MS.gene065675:CDS |
CCAGTTATATTAGAATCTCT+TGG | 0.437156 | 1.4:-82948336 | None:intergenic |
TTGATTAGAATGCATCGTAT+TGG | 0.437438 | 1.4:-82952283 | None:intergenic |
GCCGCCGTTCGCCGCCGTTA+CGG | 0.438548 | 1.4:-82947905 | None:intergenic |
ATGAAGCTTCCAACTCATAC+TGG | 0.440868 | 1.4:+82948096 | MS.gene065675:CDS |
AATCATAAGAAGCAACAGAT+AGG | 0.460354 | 1.4:-82951157 | None:intergenic |
CTTAGGTTGGCTGGTGCTGA+GGG | 0.467458 | 1.4:+82952256 | MS.gene065675:CDS |
CTTCCCGGCGAGGAGGGATA+AGG | 0.477141 | 1.4:-82947933 | None:intergenic |
TGGACTGAATATAATCCTGC+TGG | 0.490321 | 1.4:-82952223 | None:intergenic |
GGTACTCATGTTGATGCTCC+TGG | 0.490330 | 1.4:+82948117 | MS.gene065675:CDS |
TCTTAGGTTGGCTGGTGCTG+AGG | 0.495320 | 1.4:+82952255 | MS.gene065675:CDS |
TAACCTTATCCCTCCTCGCC+GGG | 0.497045 | 1.4:+82947930 | MS.gene065675:CDS |
GGTAGTAGCGTTAGCCTTGG+TGG | 0.508800 | 1.4:+82947873 | MS.gene065675:CDS |
TCAGCACCAGCCAACCTAAG+AGG | 0.516231 | 1.4:-82952253 | None:intergenic |
GGAACATCAACTAATAGAGC+AGG | 0.518734 | 1.4:-82948315 | None:intergenic |
CATTTCAGAGTTATTAGCGA+TGG | 0.534072 | 1.4:-82948076 | None:intergenic |
GAATTTGACTCGAGCTATGT+GGG | 0.544572 | 1.4:+82949971 | MS.gene065675:CDS |
CCATCTTTAGTCTCAAAAGC+TGG | 0.545793 | 1.4:-82948009 | None:intergenic |
TAATGATCGAAGACATGTCC+AGG | 0.547630 | 1.4:-82948135 | None:intergenic |
ATAACCTTATCCCTCCTCGC+CGG | 0.552149 | 1.4:+82947929 | MS.gene065675:CDS |
AAACTTGATGATGTCCCAGC+AGG | 0.554591 | 1.4:+82952208 | MS.gene065675:CDS |
TAGGCGGCTTATGTTTCAGA+AGG | 0.554622 | 1.4:+82949949 | MS.gene065675:intron |
TTTGAGACTAAAGATGGTAT+CGG | 0.559563 | 1.4:+82948015 | MS.gene065675:CDS |
CGTATACTTCCCGGCGAGGA+GGG | 0.566543 | 1.4:-82947939 | None:intergenic |
TCGTATACTTCCCGGCGAGG+AGG | 0.574729 | 1.4:-82947940 | None:intergenic |
GGAATTTGACTCGAGCTATG+TGG | 0.575810 | 1.4:+82949970 | MS.gene065675:CDS |
AGTACACGCTTTACACCTCT+GGG | 0.579818 | 1.4:-82949379 | None:intergenic |
ATCTCCGTAACGGCGGCGAA+CGG | 0.585305 | 1.4:+82947901 | MS.gene065675:CDS |
GGACTGAATATAATCCTGCT+GGG | 0.585452 | 1.4:-82952222 | None:intergenic |
TCCGAACATTGAATACCGAC+AGG | 0.592325 | 1.4:+82949404 | MS.gene065675:CDS |
TCCGTAACGGCGGCGAACGG+CGG | 0.592438 | 1.4:+82947904 | MS.gene065675:CDS |
ACATGAGTACCAGTATGAGT+TGG | 0.596387 | 1.4:-82948105 | None:intergenic |
TATGTGGGATTCACTGTGGA+TGG | 0.615993 | 1.4:+82949986 | MS.gene065675:CDS |
AGCGGTAGTAGCGTTAGCCT+TGG | 0.620390 | 1.4:+82947870 | MS.gene065675:CDS |
GAAGATGAAACAAACCATTG+AGG | 0.623787 | 1.4:-82948200 | None:intergenic |
GAATCTTCGATATCACTCAC+AGG | 0.624678 | 1.4:+82947971 | MS.gene065675:CDS |
ATGGTATCGGTCAATTCTTG+TGG | 0.629228 | 1.4:+82948028 | MS.gene065675:CDS |
TCGAAATATGAAGTATCAAG+CGG | 0.632220 | 1.4:+82947852 | None:intergenic |
CGCCGGGAAGTATACGACAA+TGG | 0.637447 | 1.4:+82947946 | MS.gene065675:CDS |
CCAACCTAAGAGGTAAGCAA+TGG | 0.639046 | 1.4:-82952243 | None:intergenic |
GGATGGCGCAAAGTGGCTAG+TGG | 0.640794 | 1.4:+82950003 | MS.gene065675:CDS |
GAACATCAACTAATAGAGCA+GGG | 0.644133 | 1.4:-82948314 | None:intergenic |
GGTGGTTACAATCTCCGTAA+CGG | 0.645027 | 1.4:+82947891 | MS.gene065675:CDS |
TCACTGTGGATGGCGCAAAG+TGG | 0.674320 | 1.4:+82949996 | MS.gene065675:CDS |
TTGTCGTATACTTCCCGGCG+AGG | 0.682285 | 1.4:-82947943 | None:intergenic |
GAGCTATGTGGGATTCACTG+TGG | 0.716645 | 1.4:+82949982 | MS.gene065675:CDS |
GGTTACAATCTCCGTAACGG+CGG | 0.717462 | 1.4:+82947894 | MS.gene065675:CDS |
TACGGAGATTGTAACCACCA+AGG | 0.724247 | 1.4:-82947887 | None:intergenic |
AAGTCATTAAATATTCCCAG+AGG | 0.764509 | 1.4:+82949364 | MS.gene065675:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACATTTAATTATGATTTA+TGG | + | chr1.4:82949790-82949809 | MS.gene065675:intron | 10.0% |
!! | AACATTTAATTATGATTTAT+GGG | + | chr1.4:82949791-82949810 | MS.gene065675:intron | 10.0% |
!! | AATTGAAAGAGAAAAAAATT+GGG | - | chr1.4:82951070-82951089 | None:intergenic | 15.0% |
!! | AATTGAAGATATTTATAACT+AGG | - | chr1.4:82950496-82950515 | None:intergenic | 15.0% |
!! | ACAACATTAATAATTAATGT+GGG | + | chr1.4:82948750-82948769 | MS.gene065675:intron | 15.0% |
!! | ATAACATATTTAATCAATTC+TGG | - | chr1.4:82949117-82949136 | None:intergenic | 15.0% |
!! | TATTAGATGAAGATAATATT+TGG | + | chr1.4:82950212-82950231 | MS.gene065675:intron | 15.0% |
!!! | AAATTGATTTTGATGTATTT+AGG | + | chr1.4:82951537-82951556 | MS.gene065675:intron | 15.0% |
!!! | AATCAATTGTTATTTTGATT+TGG | + | chr1.4:82949251-82949270 | MS.gene065675:intron | 15.0% |
!!! | AATTAGTTTTAAGTCAAAAA+GGG | - | chr1.4:82951292-82951311 | None:intergenic | 15.0% |
!!! | TACATTTTTGCTTATAATTT+AGG | + | chr1.4:82949063-82949082 | MS.gene065675:intron | 15.0% |
!!! | TTCAATTCTTAACATTTTTT+TGG | + | chr1.4:82951083-82951102 | MS.gene065675:intron | 15.0% |
!!! | TTTGGTTTAATTTCATATTT+AGG | + | chr1.4:82948398-82948417 | MS.gene065675:intron | 15.0% |
!! | AAAAATGTACATAAATGCAT+TGG | - | chr1.4:82949052-82949071 | None:intergenic | 20.0% |
!! | AACATTAATAATTAATGTGG+GGG | + | chr1.4:82948752-82948771 | MS.gene065675:intron | 20.0% |
!! | AAGATGATCATTATAATTAG+GGG | - | chr1.4:82948727-82948746 | None:intergenic | 20.0% |
!! | AGAAGATGATCATTATAATT+AGG | - | chr1.4:82948729-82948748 | None:intergenic | 20.0% |
!! | ATTGAAAGAGAAAAAAATTG+GGG | - | chr1.4:82951069-82951088 | None:intergenic | 20.0% |
!! | CAACATTAATAATTAATGTG+GGG | + | chr1.4:82948751-82948770 | MS.gene065675:intron | 20.0% |
!! | CACAACATTAATAATTAATG+TGG | + | chr1.4:82948749-82948768 | MS.gene065675:intron | 20.0% |
!! | CATAAAATCTAATATCTTTG+TGG | - | chr1.4:82950671-82950690 | None:intergenic | 20.0% |
!! | CTTATAGAAATAAGTTATGT+TGG | - | chr1.4:82948483-82948502 | None:intergenic | 20.0% |
!! | GAAGATGATCATTATAATTA+GGG | - | chr1.4:82948728-82948747 | None:intergenic | 20.0% |
!! | GAATCCAATAAAAAATGAAA+TGG | - | chr1.4:82950913-82950932 | None:intergenic | 20.0% |
!! | GAATTGAAAGAGAAAAAAAT+TGG | - | chr1.4:82951071-82951090 | None:intergenic | 20.0% |
!! | GAGTTATTCTAAATCTTATT+AGG | + | chr1.4:82950872-82950891 | MS.gene065675:intron | 20.0% |
!! | TATAAAAGACACTGAAATTT+GGG | - | chr1.4:82949221-82949240 | None:intergenic | 20.0% |
!! | TATTGGATTCAAGATTATAA+TGG | + | chr1.4:82950923-82950942 | MS.gene065675:intron | 20.0% |
!! | TGAGAAAGTTTGATTAAAAT+AGG | - | chr1.4:82949194-82949213 | None:intergenic | 20.0% |
!!! | AAAGATATTTTCGAATTTGT+TGG | + | chr1.4:82952013-82952032 | MS.gene065675:intron | 20.0% |
!!! | AATTCTTTGAAAGTTTTCTA+TGG | - | chr1.4:82949169-82949188 | None:intergenic | 20.0% |
!!! | ATAGCTTCTGATAATTTTTT+TGG | + | chr1.4:82948380-82948399 | MS.gene065675:intron | 20.0% |
!!! | CAATTAGTTTTAAGTCAAAA+AGG | - | chr1.4:82951293-82951312 | None:intergenic | 20.0% |
!!! | GTTTGACTTTATTTTATCTT+TGG | + | chr1.4:82948550-82948569 | MS.gene065675:intron | 20.0% |
!!! | TAGGCATAATTTTATTTTCT+TGG | + | chr1.4:82950715-82950734 | MS.gene065675:intron | 20.0% |
!!! | TATCTTTGGTAATAGAAATA+AGG | + | chr1.4:82948564-82948583 | MS.gene065675:intron | 20.0% |
!!! | TTATTTATGTGATGTCATTT+AGG | + | chr1.4:82951125-82951144 | MS.gene065675:intron | 20.0% |
!!! | TTCACCATTTCATTTTTTAT+TGG | + | chr1.4:82950906-82950925 | MS.gene065675:intron | 20.0% |
! | AACACTGATATTAAACTTGT+TGG | + | chr1.4:82950028-82950047 | MS.gene065675:CDS | 25.0% |
! | AATGTTAAGTGGTTTATGTT+CGG | - | chr1.4:82951685-82951704 | None:intergenic | 25.0% |
! | ACATAAACAATTACTCATTC+TGG | + | chr1.4:82948590-82948609 | MS.gene065675:intron | 25.0% |
! | ATATCACAAGTTAACTGAAT+TGG | + | chr1.4:82949438-82949457 | MS.gene065675:intron | 25.0% |
! | ATCATATCCAATTGTCAAAT+TGG | + | chr1.4:82951833-82951852 | MS.gene065675:intron | 25.0% |
! | ATGCATTCTAATCAAGTATT+AGG | + | chr1.4:82952291-82952310 | MS.gene065675:CDS | 25.0% |
! | GTATAAAAGACACTGAAATT+TGG | - | chr1.4:82949222-82949241 | None:intergenic | 25.0% |
! | GTGTTTATCATATACTACTT+AGG | - | chr1.4:82949089-82949108 | None:intergenic | 25.0% |
! | TAAATATGTTATACTGTACG+AGG | + | chr1.4:82949125-82949144 | MS.gene065675:intron | 25.0% |
! | TCCAAGTTGCAAATAAATAA+TGG | - | chr1.4:82950812-82950831 | None:intergenic | 25.0% |
! | TCCATTATTTATTTGCAACT+TGG | + | chr1.4:82950808-82950827 | MS.gene065675:intron | 25.0% |
! | TCTAAATCTTATTAGGTAAC+TGG | + | chr1.4:82950879-82950898 | MS.gene065675:intron | 25.0% |
! | TGTATTCATATTCTTTGTAC+TGG | + | chr1.4:82949695-82949714 | MS.gene065675:intron | 25.0% |
! | TTGAGTGTAAAAATCACATT+TGG | - | chr1.4:82951628-82951647 | None:intergenic | 25.0% |
!! | ATAAATAATGGAATAGAGAG+AGG | - | chr1.4:82950800-82950819 | None:intergenic | 25.0% |
!! | TTCAATTGAATGAGTTGAAT+AGG | + | chr1.4:82950696-82950715 | MS.gene065675:intron | 25.0% |
!! | TTGTTTATGTGATATTTTGC+AGG | + | chr1.4:82948291-82948310 | MS.gene065675:intron | 25.0% |
!!! | CACTTTATACATTGTTTTTC+TGG | + | chr1.4:82950148-82950167 | MS.gene065675:intron | 25.0% |
!!! | TAATTTTCACTTTTCAGTGT+TGG | + | chr1.4:82951395-82951414 | MS.gene065675:intron | 25.0% |
!!! | TATTTAGGACATGTTTTGAT+TGG | + | chr1.4:82948413-82948432 | MS.gene065675:intron | 25.0% |
!!! | TTTATTTTCTTGGTGAACAT+AGG | + | chr1.4:82950725-82950744 | MS.gene065675:intron | 25.0% |
!!! | TTTGATTTGGAAAAACTAGA+AGG | + | chr1.4:82949264-82949283 | MS.gene065675:intron | 25.0% |
AAATGTCGGAATAAATGTCA+CGG | - | chr1.4:82950093-82950112 | None:intergenic | 30.0% | |
AACGTAGCATATTAAAGTTG+GGG | + | chr1.4:82949750-82949769 | MS.gene065675:intron | 30.0% | |
AAGAAAAATCCCAGGTTTAT+TGG | - | chr1.4:82951359-82951378 | None:intergenic | 30.0% | |
AAGTCATTAAATATTCCCAG+AGG | + | chr1.4:82949364-82949383 | MS.gene065675:CDS | 30.0% | |
AATCATAAGAAGCAACAGAT+AGG | - | chr1.4:82951160-82951179 | None:intergenic | 30.0% | |
ACAAGCTTCAGTTTCTAATT+AGG | - | chr1.4:82949921-82949940 | None:intergenic | 30.0% | |
ACCTACTTTCACACTTATTA+AGG | + | chr1.4:82948633-82948652 | MS.gene065675:intron | 30.0% | |
AGTAGTAGTATGGTCATAAA+AGG | - | chr1.4:82950993-82951012 | None:intergenic | 30.0% | |
AGTTGAGACAAACACATAAT+TGG | - | chr1.4:82949618-82949637 | None:intergenic | 30.0% | |
ATTCATAAGTGCAACTAATC+AGG | - | chr1.4:82950306-82950325 | None:intergenic | 30.0% | |
CAAACAAAACATCAATGAAC+TGG | - | chr1.4:82951920-82951939 | None:intergenic | 30.0% | |
CAACGTAGCATATTAAAGTT+GGG | + | chr1.4:82949749-82949768 | MS.gene065675:intron | 30.0% | |
CCAAGAGATTCTAATATAAC+TGG | + | chr1.4:82948336-82948355 | MS.gene065675:CDS | 30.0% | |
CCAGTTATATTAGAATCTCT+TGG | - | chr1.4:82948339-82948358 | None:intergenic | 30.0% | |
GATTAACAAAGAAAAATCCC+AGG | - | chr1.4:82951367-82951386 | None:intergenic | 30.0% | |
TAAGTCAAAGTTTAGGGAAA+CGG | - | chr1.4:82950576-82950595 | None:intergenic | 30.0% | |
TAATTGCATCTCAATTCTCA+AGG | + | chr1.4:82951307-82951326 | MS.gene065675:intron | 30.0% | |
TACAAATGCAAAACTAGACA+CGG | - | chr1.4:82950120-82950139 | None:intergenic | 30.0% | |
TACATTCAGATAACACATAC+AGG | - | chr1.4:82949669-82949688 | None:intergenic | 30.0% | |
TCCTTAATAAGTGTGAAAGT+AGG | - | chr1.4:82948637-82948656 | None:intergenic | 30.0% | |
TTAAAGTTCCATACACAACT+GGG | + | chr1.4:82951438-82951457 | MS.gene065675:intron | 30.0% | |
TTAGTTGCACTTATGAATAG+TGG | + | chr1.4:82950308-82950327 | MS.gene065675:intron | 30.0% | |
TTCACACTTATTAAGGATGA+CGG | + | chr1.4:82948640-82948659 | MS.gene065675:intron | 30.0% | |
TTGATTAGAATGCATCGTAT+TGG | - | chr1.4:82952286-82952305 | None:intergenic | 30.0% | |
TTGTAACCATGAACATCATA+GGG | + | chr1.4:82951488-82951507 | MS.gene065675:intron | 30.0% | |
TTGTTCCTTTGGATAATTGA+AGG | + | chr1.4:82952077-82952096 | MS.gene065675:intron | 30.0% | |
TTTAAAAACACAAGGTGAGA+TGG | - | chr1.4:82951191-82951210 | None:intergenic | 30.0% | |
TTTGTAACCATGAACATCAT+AGG | + | chr1.4:82951487-82951506 | MS.gene065675:intron | 30.0% | |
! | AAAGTGAGTTGAATGTTAAG+TGG | - | chr1.4:82951696-82951715 | None:intergenic | 30.0% |
! | AGAGAACATCTAAAACACAA+CGG | - | chr1.4:82950399-82950418 | None:intergenic | 30.0% |
! | ATGTTCTCTCTGATTTTTGT+TGG | + | chr1.4:82950410-82950429 | MS.gene065675:intron | 30.0% |
! | TTTAAAGTTCCATACACAAC+TGG | + | chr1.4:82951437-82951456 | MS.gene065675:intron | 30.0% |
! | TTTGAGACTAAAGATGGTAT+CGG | + | chr1.4:82948015-82948034 | MS.gene065675:CDS | 30.0% |
!! | ACAAACACATAATTGGTCTT+TGG | - | chr1.4:82949611-82949630 | None:intergenic | 30.0% |
!! | ACCTTGTGTTTTTAAAAGAC+AGG | + | chr1.4:82951195-82951214 | MS.gene065675:CDS | 30.0% |
!! | CCTTGTGTTTTTAAAAGACA+GGG | + | chr1.4:82951196-82951215 | MS.gene065675:CDS | 30.0% |
!! | CTGATATTAAACTTGTTGGT+AGG | + | chr1.4:82950032-82950051 | MS.gene065675:intron | 30.0% |
!! | CTTCATTGTATTAGCTTTGA+GGG | + | chr1.4:82948871-82948890 | MS.gene065675:intron | 30.0% |
!! | GTTTTAAGTCAAAAAGGGTA+GGG | - | chr1.4:82951287-82951306 | None:intergenic | 30.0% |
!! | TTCATTGTATTAGCTTTGAG+GGG | + | chr1.4:82948872-82948891 | MS.gene065675:intron | 30.0% |
!!! | AGTGTTGGTATCATTTGTTT+TGG | + | chr1.4:82951410-82951429 | MS.gene065675:intron | 30.0% |
!!! | AGTTTTAAGTCAAAAAGGGT+AGG | - | chr1.4:82951288-82951307 | None:intergenic | 30.0% |
!!! | TTTTTTTGGCTCAATTTTGC+TGG | + | chr1.4:82951097-82951116 | MS.gene065675:intron | 30.0% |
AACTGAATTGGCACTGTTAT+AGG | + | chr1.4:82949450-82949469 | MS.gene065675:intron | 35.0% | |
AATATCTTTGTGGTCAGTAG+TGG | - | chr1.4:82950661-82950680 | None:intergenic | 35.0% | |
AATGACTTCATAACTTCAGC+TGG | - | chr1.4:82949352-82949371 | None:intergenic | 35.0% | |
AATGTCGGAATAAATGTCAC+GGG | - | chr1.4:82950092-82950111 | None:intergenic | 35.0% | |
ACAAAACAGTTGGAAATCTG+GGG | - | chr1.4:82948999-82949018 | None:intergenic | 35.0% | |
ACTGAATTGGCACTGTTATA+GGG | + | chr1.4:82949451-82949470 | MS.gene065675:intron | 35.0% | |
AGTACATCACAGTAGTAGTA+TGG | - | chr1.4:82951003-82951022 | None:intergenic | 35.0% | |
ATACCACAGTACACATGAAA+AGG | - | chr1.4:82950542-82950561 | None:intergenic | 35.0% | |
ATATGTTATACTGTACGAGG+AGG | + | chr1.4:82949128-82949147 | MS.gene065675:intron | 35.0% | |
ATATTGTGCACATTACCTGT+CGG | - | chr1.4:82949422-82949441 | None:intergenic | 35.0% | |
ATCAAGGTCTATTTGAACAG+TGG | - | chr1.4:82949826-82949845 | None:intergenic | 35.0% | |
ATCAGCAGAGTAGTTTGAAT+TGG | - | chr1.4:82949521-82949540 | None:intergenic | 35.0% | |
ATGTTACTCTCCAATAAACC+TGG | + | chr1.4:82951346-82951365 | MS.gene065675:intron | 35.0% | |
ATTTGGAAAAACTAGAAGGC+TGG | + | chr1.4:82949268-82949287 | MS.gene065675:intron | 35.0% | |
CACAAAACAGTTGGAAATCT+GGG | - | chr1.4:82949000-82949019 | None:intergenic | 35.0% | |
CATTTCAGAGTTATTAGCGA+TGG | - | chr1.4:82948079-82948098 | None:intergenic | 35.0% | |
CCTCAAAGCTAATACAATGA+AGG | - | chr1.4:82948873-82948892 | None:intergenic | 35.0% | |
CTAAAACACAACGGCATATT+CGG | - | chr1.4:82950390-82950409 | None:intergenic | 35.0% | |
CTAACTACTCCAAATACTTC+AGG | + | chr1.4:82952162-82952181 | MS.gene065675:intron | 35.0% | |
CTAACTCATCCTTACAAAAC+CGG | - | chr1.4:82948975-82948994 | None:intergenic | 35.0% | |
CTCAATTCTCAAGGTCTTTA+GGG | + | chr1.4:82951316-82951335 | MS.gene065675:intron | 35.0% | |
CTGAGTTAGAATCAACTCTT+AGG | - | chr1.4:82951587-82951606 | None:intergenic | 35.0% | |
CTTGATAAGAGTTTGCAAAG+AGG | + | chr1.4:82948928-82948947 | MS.gene065675:intron | 35.0% | |
GAACATCAACTAATAGAGCA+GGG | - | chr1.4:82948317-82948336 | None:intergenic | 35.0% | |
GAAGATGAAACAAACCATTG+AGG | - | chr1.4:82948203-82948222 | None:intergenic | 35.0% | |
GATCTTATCGAGCATATAAG+TGG | - | chr1.4:82949852-82949871 | None:intergenic | 35.0% | |
GCAACGTAGCATATTAAAGT+TGG | + | chr1.4:82949748-82949767 | MS.gene065675:intron | 35.0% | |
GCTACTTATCGTGAACAATA+TGG | - | chr1.4:82949730-82949749 | None:intergenic | 35.0% | |
GTCATAAAAGGAGAAGATCA+AGG | - | chr1.4:82950981-82951000 | None:intergenic | 35.0% | |
GTTTAGTGTCACAAAACAGT+TGG | - | chr1.4:82949009-82949028 | None:intergenic | 35.0% | |
TAAAACACAACGGCATATTC+GGG | - | chr1.4:82950389-82950408 | None:intergenic | 35.0% | |
TAAATACTTGCGAGACTGTT+TGG | + | chr1.4:82948448-82948467 | MS.gene065675:intron | 35.0% | |
TATAGGGAGAATCACAACTA+GGG | + | chr1.4:82949467-82949486 | MS.gene065675:intron | 35.0% | |
TCACAAAACAGTTGGAAATC+TGG | - | chr1.4:82949001-82949020 | None:intergenic | 35.0% | |
TCTCAATTCTCAAGGTCTTT+AGG | + | chr1.4:82951315-82951334 | MS.gene065675:intron | 35.0% | |
TGAAAATTCCGCCTTAATTG+TGG | + | chr1.4:82948790-82948809 | MS.gene065675:intron | 35.0% | |
TGTTACTCTCCAATAAACCT+GGG | + | chr1.4:82951347-82951366 | MS.gene065675:intron | 35.0% | |
TTACAAGAGATTCCCTATAG+CGG | - | chr1.4:82950363-82950382 | None:intergenic | 35.0% | |
TTATAGGGAGAATCACAACT+AGG | + | chr1.4:82949466-82949485 | MS.gene065675:intron | 35.0% | |
TTCGACCTTCAATTATCCAA+AGG | - | chr1.4:82952085-82952104 | None:intergenic | 35.0% | |
! | AGTGATGTCTTTTGTTCCTT+TGG | + | chr1.4:82952066-82952085 | MS.gene065675:intron | 35.0% |
! | ATTCTTTGTACTGGTGTCAA+TGG | + | chr1.4:82949704-82949723 | MS.gene065675:intron | 35.0% |
! | CTAAGAGTTGATTCTAACTC+AGG | + | chr1.4:82951585-82951604 | MS.gene065675:intron | 35.0% |
! | CTGATTTTTGTTGGACTCTT+TGG | + | chr1.4:82950419-82950438 | MS.gene065675:intron | 35.0% |
! | CTTCCAAAAAGCATGAAGAA+CGG | + | chr1.4:82948051-82948070 | MS.gene065675:CDS | 35.0% |
! | GAATGCTTTCCTGAAGTATT+TGG | - | chr1.4:82952174-82952193 | None:intergenic | 35.0% |
! | TTCCCTAAACTTTGACTTAG+CGG | + | chr1.4:82950577-82950596 | MS.gene065675:intron | 35.0% |
!! | AAGCTTGTTGAACTATTAGG+CGG | + | chr1.4:82949933-82949952 | MS.gene065675:intron | 35.0% |
!! | AGCATATAAGTGGACTATCA+AGG | - | chr1.4:82949842-82949861 | None:intergenic | 35.0% |
!! | AGTTCATGTCATGTTGATTC+TGG | - | chr1.4:82952144-82952163 | None:intergenic | 35.0% |
!! | ATTGGTCTTTGGTAAATTCC+TGG | - | chr1.4:82949600-82949619 | None:intergenic | 35.0% |
!! | CCCTGTCTTTTAAAAACACA+AGG | - | chr1.4:82951199-82951218 | None:intergenic | 35.0% |
!! | CCTTCATTGTATTAGCTTTG+AGG | + | chr1.4:82948870-82948889 | MS.gene065675:intron | 35.0% |
!! | CTGAAGCTTGTTGAACTATT+AGG | + | chr1.4:82949930-82949949 | MS.gene065675:intron | 35.0% |
!! | TCATTGTATTAGCTTTGAGG+GGG | + | chr1.4:82948873-82948892 | MS.gene065675:intron | 35.0% |
AACGTGTGTGTTTGGTTATG+CGG | - | chr1.4:82951767-82951786 | None:intergenic | 40.0% | |
ACATGAGTACCAGTATGAGT+TGG | - | chr1.4:82948108-82948127 | None:intergenic | 40.0% | |
ACCTGTCGGTATTCAATGTT+CGG | - | chr1.4:82949408-82949427 | None:intergenic | 40.0% | |
AGCCGCTAAGTCAAAGTTTA+GGG | - | chr1.4:82950582-82950601 | None:intergenic | 40.0% | |
AGCTATCCCTATGATGTTCA+TGG | - | chr1.4:82951497-82951516 | None:intergenic | 40.0% | |
ATCTCAGTGCTTGGTTGATT+TGG | + | chr1.4:82951951-82951970 | MS.gene065675:intron | 40.0% | |
ATGAAGCTTCCAACTCATAC+TGG | + | chr1.4:82948096-82948115 | MS.gene065675:CDS | 40.0% | |
ATGTCACTACTTGCACTTCA+TGG | - | chr1.4:82949577-82949596 | None:intergenic | 40.0% | |
CCATCTTTAGTCTCAAAAGC+TGG | - | chr1.4:82948012-82948031 | None:intergenic | 40.0% | |
GAATCTTCGATATCACTCAC+AGG | + | chr1.4:82947971-82947990 | MS.gene065675:CDS | 40.0% | |
GATAAGAGTTTGCAAAGAGG+AGG | + | chr1.4:82948931-82948950 | MS.gene065675:intron | 40.0% | |
GGAACATCAACTAATAGAGC+AGG | - | chr1.4:82948318-82948337 | None:intergenic | 40.0% | |
GGACTGAATATAATCCTGCT+GGG | - | chr1.4:82952225-82952244 | None:intergenic | 40.0% | |
GTAATCAATAGCAGTCGTAG+CGG | + | chr1.4:82950239-82950258 | MS.gene065675:intron | 40.0% | |
GTAGCATATTAAAGTTGGGG+TGG | + | chr1.4:82949753-82949772 | MS.gene065675:intron | 40.0% | |
GTATCTACAACGTGTGTGTT+TGG | - | chr1.4:82951775-82951794 | None:intergenic | 40.0% | |
TAATGATCGAAGACATGTCC+AGG | - | chr1.4:82948138-82948157 | None:intergenic | 40.0% | |
TGGACTGAATATAATCCTGC+TGG | - | chr1.4:82952226-82952245 | None:intergenic | 40.0% | |
TTCCATTGTCGTATACTTCC+CGG | - | chr1.4:82947951-82947970 | None:intergenic | 40.0% | |
TTCGATCATTACTTCGATGC+TGG | + | chr1.4:82948147-82948166 | MS.gene065675:CDS | 40.0% | |
! | AGAGTCTTATCTAACCGATG+TGG | - | chr1.4:82948910-82948929 | None:intergenic | 40.0% |
! | CTACATGTATGAAGCACCTA+TGG | - | chr1.4:82950183-82950202 | None:intergenic | 40.0% |
! | GAACCGTTCTTCATGCTTTT+TGG | - | chr1.4:82948057-82948076 | None:intergenic | 40.0% |
! | GAATTTGACTCGAGCTATGT+GGG | + | chr1.4:82949971-82949990 | MS.gene065675:CDS | 40.0% |
! | GAGTCTTATCTAACCGATGT+GGG | - | chr1.4:82948909-82948928 | None:intergenic | 40.0% |
! | TAGCCTTTTCATGTGTACTG+TGG | + | chr1.4:82950536-82950555 | MS.gene065675:intron | 40.0% |
!! | AATTAATGTGGGGGTGTTTC+TGG | + | chr1.4:82948761-82948780 | MS.gene065675:intron | 40.0% |
!! | ATGGTATCGGTCAATTCTTG+TGG | + | chr1.4:82948028-82948047 | MS.gene065675:CDS | 40.0% |
!! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr1.4:82948973-82948992 | MS.gene065675:intron | 40.0% |
!! | TTTGTGGTCAGTAGTGGATA+GGG | - | chr1.4:82950655-82950674 | None:intergenic | 40.0% |
!!! | CCAGCTTTTGAGACTAAAGA+TGG | + | chr1.4:82948009-82948028 | MS.gene065675:CDS | 40.0% |
AAGTGCAAGTAGTGACATCC+AGG | + | chr1.4:82949579-82949598 | MS.gene065675:intron | 45.0% | |
ACTAGGGCACACCACAATTA+AGG | - | chr1.4:82948804-82948823 | None:intergenic | 45.0% | |
AGTACACGCTTTACACCTCT+GGG | - | chr1.4:82949382-82949401 | None:intergenic | 45.0% | |
CAAACCAGAGGCTGCAATTT+AGG | - | chr1.4:82948829-82948848 | None:intergenic | 45.0% | |
CAGCCGCTAAGTCAAAGTTT+AGG | - | chr1.4:82950583-82950602 | None:intergenic | 45.0% | |
CAGTCCATTGCTTACCTCTT+AGG | + | chr1.4:82952239-82952258 | MS.gene065675:CDS | 45.0% | |
CCAACCTAAGAGGTAAGCAA+TGG | - | chr1.4:82952246-82952265 | None:intergenic | 45.0% | |
CCATTGCTTACCTCTTAGGT+TGG | + | chr1.4:82952243-82952262 | MS.gene065675:CDS | 45.0% | |
CTAGACACGGTCACAAATGT+CGG | - | chr1.4:82950107-82950126 | None:intergenic | 45.0% | |
CTGGGACATCATCAAGTTTC+AGG | - | chr1.4:82952207-82952226 | None:intergenic | 45.0% | |
CTTATGAATAGTGGCTGCAG+CGG | + | chr1.4:82950317-82950336 | MS.gene065675:intron | 45.0% | |
GCACATCAAATCTCAGTGCT+TGG | + | chr1.4:82951942-82951961 | MS.gene065675:intron | 45.0% | |
GGTGGTTACAATCTCCGTAA+CGG | + | chr1.4:82947891-82947910 | MS.gene065675:CDS | 45.0% | |
GTACAAGTGTGTGTTGAGCA+TGG | - | chr1.4:82951812-82951831 | None:intergenic | 45.0% | |
TACGGAGATTGTAACCACCA+AGG | - | chr1.4:82947890-82947909 | None:intergenic | 45.0% | |
TAGGCGGCTTATGTTTCAGA+AGG | + | chr1.4:82949949-82949968 | MS.gene065675:intron | 45.0% | |
TATGTGGGATTCACTGTGGA+TGG | + | chr1.4:82949986-82950005 | MS.gene065675:CDS | 45.0% | |
TCCGAACATTGAATACCGAC+AGG | + | chr1.4:82949404-82949423 | MS.gene065675:CDS | 45.0% | |
! | GGAATTTGACTCGAGCTATG+TGG | + | chr1.4:82949970-82949989 | MS.gene065675:CDS | 45.0% |
! | GTATGAAGCACCTATGGAGT+CGG | - | chr1.4:82950177-82950196 | None:intergenic | 45.0% |
!! | AAACTTGATGATGTCCCAGC+AGG | + | chr1.4:82952208-82952227 | MS.gene065675:CDS | 45.0% |
!! | CCTTACAAAACCGGCTTGTA+AGG | - | chr1.4:82948966-82948985 | None:intergenic | 45.0% |
!! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr1.4:82948963-82948982 | MS.gene065675:intron | 45.0% |
!! | CTTTGTGGTCAGTAGTGGAT+AGG | - | chr1.4:82950656-82950675 | None:intergenic | 45.0% |
!! | TTGTATTAGCTTTGAGGGGG+TGG | + | chr1.4:82948876-82948895 | MS.gene065675:intron | 45.0% |
AGGCTGCAATTTAGGCGACT+AGG | - | chr1.4:82948821-82948840 | None:intergenic | 50.0% | |
AGGGCACACCACAATTAAGG+CGG | - | chr1.4:82948801-82948820 | None:intergenic | 50.0% | |
ATAACCTTATCCCTCCTCGC+CGG | + | chr1.4:82947929-82947948 | MS.gene065675:CDS | 50.0% | |
CCAAAGCTCCCAGTTGTGTA+TGG | - | chr1.4:82951449-82951468 | None:intergenic | 50.0% | |
CCATACACAACTGGGAGCTT+TGG | + | chr1.4:82951446-82951465 | MS.gene065675:intron | 50.0% | |
CTGCAATGAAGGCAAACCAG+AGG | - | chr1.4:82948841-82948860 | None:intergenic | 50.0% | |
GAGAAGATCAAGGTGCAGAG+TGG | - | chr1.4:82950971-82950990 | None:intergenic | 50.0% | |
GAGCTATGTGGGATTCACTG+TGG | + | chr1.4:82949982-82950001 | MS.gene065675:CDS | 50.0% | |
GAGTACACGCTTTACACCTC+TGG | - | chr1.4:82949383-82949402 | None:intergenic | 50.0% | |
GGCTGCAATTTAGGCGACTA+GGG | - | chr1.4:82948820-82948839 | None:intergenic | 50.0% | |
GGTACTCATGTTGATGCTCC+TGG | + | chr1.4:82948117-82948136 | MS.gene065675:CDS | 50.0% | |
GGTGTTAGAGCCTGCAATGA+AGG | - | chr1.4:82948852-82948871 | None:intergenic | 50.0% | |
GGTTACAATCTCCGTAACGG+CGG | + | chr1.4:82947894-82947913 | MS.gene065675:CDS | 50.0% | |
GTCTCAAAAGCTGGCATGTC+TGG | - | chr1.4:82948003-82948022 | None:intergenic | 50.0% | |
! | CTCTGGTTTGCCTTCATTGC+AGG | + | chr1.4:82948839-82948858 | MS.gene065675:intron | 50.0% |
! | GCGCTTATGTGCCACTATAG+CGG | - | chr1.4:82950273-82950292 | None:intergenic | 50.0% |
! | GGGTGGATTTAGTCCCACAT+CGG | + | chr1.4:82948893-82948912 | MS.gene065675:intron | 50.0% |
!! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr1.4:82948961-82948980 | None:intergenic | 50.0% |
!! | TGCTTACCTCTTAGGTTGGC+TGG | + | chr1.4:82952247-82952266 | MS.gene065675:CDS | 50.0% |
!! | TGGCTGCAGCGGACTAATAA+CGG | + | chr1.4:82950328-82950347 | MS.gene065675:intron | 50.0% |
!! | TTTCTGGACACCGACTCCAT+AGG | + | chr1.4:82950164-82950183 | MS.gene065675:intron | 50.0% |
ACGGCTGTAGTTGCCGCTAT+AGG | + | chr1.4:82950347-82950366 | MS.gene065675:intron | 55.0% | |
CCTGCTACGCTATAGCGCTT+TGG | + | chr1.4:82950611-82950630 | MS.gene065675:intron | 55.0% | |
CGGCTGTAGTTGCCGCTATA+GGG | + | chr1.4:82950348-82950367 | MS.gene065675:intron | 55.0% | |
GCACTCCTCACCTTACAAGC+CGG | + | chr1.4:82948953-82948972 | MS.gene065675:intron | 55.0% | |
GCTACGCTATAGCGCTTTGG+CGG | + | chr1.4:82950614-82950633 | MS.gene065675:intron | 55.0% | |
GTCGCCTAAATTGCAGCCTC+TGG | + | chr1.4:82948822-82948841 | MS.gene065675:intron | 55.0% | |
TAACCTTATCCCTCCTCGCC+GGG | + | chr1.4:82947930-82947949 | MS.gene065675:CDS | 55.0% | |
TCACTGTGGATGGCGCAAAG+TGG | + | chr1.4:82949996-82950015 | MS.gene065675:CDS | 55.0% | |
TCAGCACCAGCCAACCTAAG+AGG | - | chr1.4:82952256-82952275 | None:intergenic | 55.0% | |
TTGTCGTATACTTCCCGGCG+AGG | - | chr1.4:82947946-82947965 | None:intergenic | 55.0% | |
! | AGCGGTAGTAGCGTTAGCCT+TGG | + | chr1.4:82947870-82947889 | MS.gene065675:CDS | 55.0% |
! | CCAAAGCGCTATAGCGTAGC+AGG | - | chr1.4:82950614-82950633 | None:intergenic | 55.0% |
! | CGCCGGGAAGTATACGACAA+TGG | + | chr1.4:82947946-82947965 | MS.gene065675:CDS | 55.0% |
! | CTCGACTTGCACGTCCTCAA+TGG | + | chr1.4:82948186-82948205 | MS.gene065675:CDS | 55.0% |
! | TAGTGGATAGGGCTGTGTGG+CGG | - | chr1.4:82950644-82950663 | None:intergenic | 55.0% |
!! | CAGTAGTGGATAGGGCTGTG+TGG | - | chr1.4:82950647-82950666 | None:intergenic | 55.0% |
!! | CTTAGGTTGGCTGGTGCTGA+GGG | + | chr1.4:82952256-82952275 | MS.gene065675:CDS | 55.0% |
!! | GGTAGTAGCGTTAGCCTTGG+TGG | + | chr1.4:82947873-82947892 | MS.gene065675:CDS | 55.0% |
!! | TAGCAGTCGTAGCGGACTAG+CGG | + | chr1.4:82950247-82950266 | MS.gene065675:intron | 55.0% |
!! | TCTTAGGTTGGCTGGTGCTG+AGG | + | chr1.4:82952255-82952274 | MS.gene065675:CDS | 55.0% |
ATCTCCGTAACGGCGGCGAA+CGG | + | chr1.4:82947901-82947920 | MS.gene065675:CDS | 60.0% | |
CGCTATAGCGCTTTGGCGGT+CGG | + | chr1.4:82950618-82950637 | MS.gene065675:intron | 60.0% | |
CGTATACTTCCCGGCGAGGA+GGG | - | chr1.4:82947942-82947961 | None:intergenic | 60.0% | |
GGATGGCGCAAAGTGGCTAG+TGG | + | chr1.4:82950003-82950022 | MS.gene065675:CDS | 60.0% | |
TCGTATACTTCCCGGCGAGG+AGG | - | chr1.4:82947943-82947962 | None:intergenic | 60.0% | |
CTTCCCGGCGAGGAGGGATA+AGG | - | chr1.4:82947936-82947955 | None:intergenic | 65.0% | |
!! | CGGACTAGCGGCCGCTATAG+TGG | + | chr1.4:82950259-82950278 | MS.gene065675:intron | 65.0% |
TCCGTAACGGCGGCGAACGG+CGG | + | chr1.4:82947904-82947923 | MS.gene065675:CDS | 70.0% | |
GCCGCCGTTCGCCGCCGTTA+CGG | - | chr1.4:82947908-82947927 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 82947859 | 82952312 | 82947859 | ID=MS.gene065675 |
chr1.4 | mRNA | 82947859 | 82952312 | 82947859 | ID=MS.gene065675.t1;Parent=MS.gene065675 |
chr1.4 | exon | 82947859 | 82948207 | 82947859 | ID=MS.gene065675.t1.exon1;Parent=MS.gene065675.t1 |
chr1.4 | CDS | 82947859 | 82948207 | 82947859 | ID=cds.MS.gene065675.t1;Parent=MS.gene065675.t1 |
chr1.4 | exon | 82948313 | 82948357 | 82948313 | ID=MS.gene065675.t1.exon2;Parent=MS.gene065675.t1 |
chr1.4 | CDS | 82948313 | 82948357 | 82948313 | ID=cds.MS.gene065675.t1;Parent=MS.gene065675.t1 |
chr1.4 | exon | 82949353 | 82949425 | 82949353 | ID=MS.gene065675.t1.exon3;Parent=MS.gene065675.t1 |
chr1.4 | CDS | 82949353 | 82949425 | 82949353 | ID=cds.MS.gene065675.t1;Parent=MS.gene065675.t1 |
chr1.4 | exon | 82949952 | 82950049 | 82949952 | ID=MS.gene065675.t1.exon4;Parent=MS.gene065675.t1 |
chr1.4 | CDS | 82949952 | 82950049 | 82949952 | ID=cds.MS.gene065675.t1;Parent=MS.gene065675.t1 |
chr1.4 | exon | 82951147 | 82951217 | 82951147 | ID=MS.gene065675.t1.exon5;Parent=MS.gene065675.t1 |
chr1.4 | CDS | 82951147 | 82951217 | 82951147 | ID=cds.MS.gene065675.t1;Parent=MS.gene065675.t1 |
chr1.4 | exon | 82952184 | 82952312 | 82952184 | ID=MS.gene065675.t1.exon6;Parent=MS.gene065675.t1 |
chr1.4 | CDS | 82952184 | 82952312 | 82952184 | ID=cds.MS.gene065675.t1;Parent=MS.gene065675.t1 |
Gene Sequence |
Protein sequence |