Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06303.t1 | XP_003602718.2 | 94.3 | 648 | 31 | 1 | 1 | 648 | 1 | 642 | 8.50E-307 | 1062.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06303.t1 | P0DH90 | 33.9 | 555 | 282 | 9 | 7 | 543 | 40 | 527 | 2.4e-68 | 261.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06303.t1 | G7J2Q4 | 94.3 | 648 | 31 | 1 | 1 | 648 | 1 | 642 | 6.1e-307 | 1062.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene06303 | 0.847827 | 9.04E-60 | -1.69E-46 |
| MS.gene049159 | MS.gene06303 | 0.882698 | 8.38E-71 | -1.69E-46 |
| MS.gene049435 | MS.gene06303 | 0.806434 | 8.24E-50 | -1.69E-46 |
| MS.gene049501 | MS.gene06303 | 0.847231 | 1.32E-59 | -1.69E-46 |
| MS.gene049821 | MS.gene06303 | 0.812289 | 4.57E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene06303 | 0.812734 | 3.65E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene06303 | 0.821388 | 4.15E-53 | -1.69E-46 |
| MS.gene050605 | MS.gene06303 | 0.816917 | 4.32E-52 | -1.69E-46 |
| MS.gene050654 | MS.gene06303 | 0.80677 | 7.00E-50 | -1.69E-46 |
| MS.gene050689 | MS.gene06303 | 0.820199 | 7.78E-53 | -1.69E-46 |
| MS.gene050719 | MS.gene06303 | 0.806826 | 6.81E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene06303 | 0.809364 | 1.96E-50 | -1.69E-46 |
| MS.gene050724 | MS.gene06303 | 0.816807 | 4.57E-52 | -1.69E-46 |
| MS.gene050737 | MS.gene06303 | 0.80642 | 8.30E-50 | -1.69E-46 |
| MS.gene050759 | MS.gene06303 | 0.824609 | 7.36E-54 | -1.69E-46 |
| MS.gene050807 | MS.gene06303 | 0.804945 | 1.69E-49 | -1.69E-46 |
| MS.gene050815 | MS.gene06303 | 0.835763 | 1.39E-56 | -1.69E-46 |
| MS.gene050826 | MS.gene06303 | 0.805798 | 1.12E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene06303 | 0.802217 | 6.23E-49 | -1.69E-46 |
| MS.gene050941 | MS.gene06303 | 0.820714 | 5.93E-53 | -1.69E-46 |
| MS.gene050962 | MS.gene06303 | 0.810485 | 1.13E-50 | -1.69E-46 |
| MS.gene051180 | MS.gene06303 | 0.809341 | 1.99E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene06303 | 0.836991 | 6.76E-57 | -1.69E-46 |
| MS.gene051210 | MS.gene06303 | 0.801683 | 8.02E-49 | -1.69E-46 |
| MS.gene051243 | MS.gene06303 | 0.819342 | 1.22E-52 | -1.69E-46 |
| MS.gene051247 | MS.gene06303 | 0.803466 | 3.44E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene06303 | 0.832568 | 8.78E-56 | -1.69E-46 |
| MS.gene051452 | MS.gene06303 | 0.807875 | 4.08E-50 | -1.69E-46 |
| MS.gene051577 | MS.gene06303 | 0.804838 | 1.78E-49 | -1.69E-46 |
| MS.gene051720 | MS.gene06303 | 0.800626 | 1.32E-48 | -1.69E-46 |
| MS.gene051744 | MS.gene06303 | 0.801576 | 8.43E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene06303 | 0.835078 | 2.07E-56 | -1.69E-46 |
| MS.gene052459 | MS.gene06303 | 0.803041 | 4.21E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene06303 | 0.83704 | 6.57E-57 | -1.69E-46 |
| MS.gene052519 | MS.gene06303 | 0.812738 | 3.64E-51 | -1.69E-46 |
| MS.gene052611 | MS.gene06303 | 0.820254 | 7.56E-53 | -1.69E-46 |
| MS.gene052773 | MS.gene06303 | 0.802414 | 5.68E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene06303 | 0.8468 | 1.73E-59 | -1.69E-46 |
| MS.gene05288 | MS.gene06303 | 0.804035 | 2.62E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene06303 | 0.816971 | 4.20E-52 | -1.69E-46 |
| MS.gene05289 | MS.gene06303 | 0.800675 | 1.29E-48 | -1.69E-46 |
| MS.gene053008 | MS.gene06303 | 0.880842 | 3.93E-70 | -1.69E-46 |
| MS.gene053079 | MS.gene06303 | 0.808401 | 3.15E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene06303 | 0.82835 | 9.44E-55 | -1.69E-46 |
| MS.gene054236 | MS.gene06303 | 0.8135 | 2.48E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene06303 | 0.836367 | 9.76E-57 | -1.69E-46 |
| MS.gene05458 | MS.gene06303 | 0.800064 | 1.72E-48 | -1.69E-46 |
| MS.gene054651 | MS.gene06303 | 0.811014 | 8.65E-51 | -1.69E-46 |
| MS.gene054657 | MS.gene06303 | 0.813946 | 1.98E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene06303 | 0.818616 | 1.79E-52 | -1.69E-46 |
| MS.gene05468 | MS.gene06303 | 0.803004 | 4.29E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene06303 | 0.818376 | 2.02E-52 | -1.69E-46 |
| MS.gene05510 | MS.gene06303 | 0.825863 | 3.72E-54 | -1.69E-46 |
| MS.gene05517 | MS.gene06303 | 0.849447 | 3.22E-60 | -1.69E-46 |
| MS.gene055222 | MS.gene06303 | 0.811029 | 8.59E-51 | -1.69E-46 |
| MS.gene055310 | MS.gene06303 | 0.816572 | 5.16E-52 | -1.69E-46 |
| MS.gene055363 | MS.gene06303 | 0.802008 | 6.88E-49 | -1.69E-46 |
| MS.gene055466 | MS.gene06303 | 0.818229 | 2.19E-52 | -1.69E-46 |
| MS.gene055468 | MS.gene06303 | 0.804017 | 2.64E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene06303 | 0.811055 | 8.48E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene06303 | 0.817166 | 3.80E-52 | -1.69E-46 |
| MS.gene055623 | MS.gene06303 | 0.876414 | 1.42E-68 | -1.69E-46 |
| MS.gene055818 | MS.gene06303 | 0.825065 | 5.74E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene06303 | 0.833068 | 6.59E-56 | -1.69E-46 |
| MS.gene05604 | MS.gene06303 | 0.809229 | 2.10E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene06303 | 0.806203 | 9.22E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene06303 | 0.815934 | 7.17E-52 | -1.69E-46 |
| MS.gene056553 | MS.gene06303 | 0.8034 | 3.55E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene06303 | 0.827188 | 1.80E-54 | -1.69E-46 |
| MS.gene056760 | MS.gene06303 | 0.802424 | 5.65E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene06303 | 0.802455 | 5.56E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene06303 | 0.825408 | 4.77E-54 | -1.69E-46 |
| MS.gene057140 | MS.gene06303 | 0.819918 | 9.02E-53 | -1.69E-46 |
| MS.gene057444 | MS.gene06303 | 0.814645 | 1.39E-51 | -1.69E-46 |
| MS.gene057446 | MS.gene06303 | 0.800065 | 1.72E-48 | -1.69E-46 |
| MS.gene057693 | MS.gene06303 | 0.809085 | 2.25E-50 | -1.69E-46 |
| MS.gene057855 | MS.gene06303 | 0.805545 | 1.27E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene06303 | 0.802551 | 5.32E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene06303 | 0.832671 | 8.28E-56 | -1.69E-46 |
| MS.gene058009 | MS.gene06303 | 0.800353 | 1.50E-48 | -1.69E-46 |
| MS.gene058010 | MS.gene06303 | 0.848882 | 4.62E-60 | -1.69E-46 |
| MS.gene058146 | MS.gene06303 | 0.81418 | 1.76E-51 | -1.69E-46 |
| MS.gene05847 | MS.gene06303 | 0.829676 | 4.51E-55 | -1.69E-46 |
| MS.gene058548 | MS.gene06303 | 0.812465 | 4.18E-51 | -1.69E-46 |
| MS.gene058595 | MS.gene06303 | 0.828855 | 7.13E-55 | -1.69E-46 |
| MS.gene058625 | MS.gene06303 | 0.814702 | 1.35E-51 | -1.69E-46 |
| MS.gene058783 | MS.gene06303 | 0.804649 | 1.95E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene06303 | 0.831999 | 1.21E-55 | -1.69E-46 |
| MS.gene059283 | MS.gene06303 | 0.843101 | 1.72E-58 | -1.69E-46 |
| MS.gene059725 | MS.gene06303 | 0.813652 | 2.30E-51 | -1.69E-46 |
| MS.gene05979 | MS.gene06303 | 0.819525 | 1.11E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene06303 | 0.882088 | 1.40E-70 | -1.69E-46 |
| MS.gene059937 | MS.gene06303 | 0.802562 | 5.29E-49 | -1.69E-46 |
| MS.gene060011 | MS.gene06303 | 0.809299 | 2.03E-50 | -1.69E-46 |
| MS.gene060296 | MS.gene06303 | 0.848501 | 5.89E-60 | -1.69E-46 |
| MS.gene060310 | MS.gene06303 | 0.81452 | 1.48E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene06303 | 0.846378 | 2.26E-59 | -1.69E-46 |
| MS.gene060429 | MS.gene06303 | 0.819667 | 1.03E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene06303 | 0.837031 | 6.61E-57 | -1.69E-46 |
| MS.gene060637 | MS.gene06303 | 0.822628 | 2.14E-53 | -1.69E-46 |
| MS.gene060685 | MS.gene06303 | 0.801813 | 7.54E-49 | -1.69E-46 |
| MS.gene060802 | MS.gene06303 | 0.854734 | 1.01E-61 | -1.69E-46 |
| MS.gene060803 | MS.gene06303 | 0.87853 | 2.61E-69 | -1.69E-46 |
| MS.gene060998 | MS.gene06303 | 0.838016 | 3.69E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06303.t1 | MTR_3g098290 | 92.901 | 648 | 40 | 1 | 1 | 648 | 1 | 642 | 0.0 | 1149 |
| MS.gene06303.t1 | MTR_8g010170 | 27.076 | 277 | 193 | 6 | 161 | 431 | 175 | 448 | 1.74e-25 | 111 |
| MS.gene06303.t1 | MTR_8g010160 | 26.165 | 279 | 193 | 7 | 161 | 431 | 175 | 448 | 6.19e-23 | 103 |
| MS.gene06303.t1 | MTR_4g095080 | 23.349 | 424 | 269 | 11 | 44 | 431 | 36 | 439 | 1.57e-19 | 92.8 |
| MS.gene06303.t1 | MTR_1g103710 | 25.852 | 352 | 207 | 10 | 131 | 468 | 106 | 417 | 6.44e-17 | 84.7 |
| MS.gene06303.t1 | MTR_8g083500 | 26.165 | 279 | 182 | 9 | 160 | 432 | 121 | 381 | 3.75e-13 | 72.8 |
| MS.gene06303.t1 | MTR_5g094400 | 23.158 | 285 | 193 | 7 | 160 | 439 | 127 | 390 | 1.32e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06303.t1 | AT4G00650 | 39.527 | 296 | 136 | 8 | 28 | 322 | 57 | 310 | 6.58e-54 | 187 |
| MS.gene06303.t1 | AT5G48385 | 27.046 | 281 | 190 | 9 | 161 | 431 | 178 | 453 | 3.08e-22 | 101 |
| MS.gene06303.t1 | AT3G22440 | 26.911 | 327 | 196 | 10 | 160 | 474 | 133 | 428 | 2.63e-15 | 79.7 |
| MS.gene06303.t1 | AT4G14900 | 23.881 | 335 | 198 | 11 | 160 | 474 | 129 | 426 | 8.63e-13 | 71.6 |
Find 140 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGCACCTTCTTCGCGTTTC+TGG | -0.032627 | 3.1:-77931911 | MS.gene06303:CDS |
| GCTACAGTGGAATAATTATT+TGG | 0.144942 | 3.1:+77928887 | None:intergenic |
| GCACAAATTGGATCTGTTTC+AGG | 0.167745 | 3.1:-77928857 | MS.gene06303:CDS |
| GCCATAGGTGGTCCACTTTC+TGG | 0.173688 | 3.1:-77928788 | MS.gene06303:CDS |
| AGCCTTTCTAGCAGGGTTTC+AGG | 0.173796 | 3.1:-77931887 | MS.gene06303:intron |
| ATTGATTTCGGTTTCGATTC+TGG | 0.251239 | 3.1:+77932586 | None:intergenic |
| GGCGCCGGAACCGGCAAAAT+TGG | 0.253876 | 3.1:-77932275 | MS.gene06303:CDS |
| TGCTCAGGGAATGATGAAAA+AGG | 0.258464 | 3.1:-77929519 | MS.gene06303:CDS |
| TAAGGATACAATTCTCAAAT+TGG | 0.261873 | 3.1:-77929164 | MS.gene06303:CDS |
| CGCACCTTCTTCGCGTTTCT+GGG | 0.272371 | 3.1:-77931910 | MS.gene06303:CDS |
| CTTGACTTGGCTTATACCTT+TGG | 0.275542 | 3.1:-77929479 | MS.gene06303:CDS |
| AATCCCGGTGGCACTGAAAA+AGG | 0.281228 | 3.1:-77932296 | MS.gene06303:CDS |
| ACCTCCTCTTCTTCTTCTTC+CGG | 0.282624 | 3.1:+77932487 | None:intergenic |
| GCCTAGGGCTTCGAGTTCTT+TGG | 0.284004 | 3.1:+77932663 | None:intergenic |
| TGCGAGGCAAGCTTCAATTT+TGG | 0.288687 | 3.1:-77932182 | MS.gene06303:CDS |
| TACAAAAGTCTAATGAAGTT+TGG | 0.294234 | 3.1:-77929412 | MS.gene06303:CDS |
| CTTGCGTGCTTTGGGATTCA+TGG | 0.299912 | 3.1:-77931992 | MS.gene06303:CDS |
| ATTCACCGATTTCGAAATAT+TGG | 0.300429 | 3.1:+77932786 | None:intergenic |
| GGCTTCGAGTTCTTTGGTTC+TGG | 0.307735 | 3.1:+77932669 | None:intergenic |
| CATCGGTGAGTTTGTTGTAT+AGG | 0.312668 | 3.1:+77932210 | None:intergenic |
| TTCAACGTCCAAGAGAAAAT+TGG | 0.328833 | 3.1:-77929101 | MS.gene06303:CDS |
| GTAGCATCTGCTGCACAAAT+TGG | 0.329014 | 3.1:-77928869 | MS.gene06303:CDS |
| ATCTGAAACGCCGTCGCTTA+AGG | 0.331700 | 3.1:-77932323 | MS.gene06303:CDS |
| TTGCAAAACTTCTTCCTGAT+TGG | 0.331985 | 3.1:-77929192 | MS.gene06303:CDS |
| TCTTCCTGATTGGAAACTTA+AGG | 0.339306 | 3.1:-77929182 | MS.gene06303:CDS |
| TTGACTTGGCTTATACCTTT+GGG | 0.342599 | 3.1:-77929478 | MS.gene06303:CDS |
| CTTGGAAGGGGAGTGTCAAT+TGG | 0.364900 | 3.1:-77928815 | MS.gene06303:CDS |
| TCGCCATCAGCAATTGATTT+CGG | 0.368516 | 3.1:+77932574 | None:intergenic |
| TGGAACAATGTTACCGTTAT+CGG | 0.374770 | 3.1:+77932615 | None:intergenic |
| TTGCGGCGGTGGTGGTGCCT+AGG | 0.376894 | 3.1:+77932647 | None:intergenic |
| TTGCCAGATCATCACTCTAT+TGG | 0.377011 | 3.1:-77928569 | MS.gene06303:CDS |
| TTGGAAGGGGAGTGTCAATT+GGG | 0.377474 | 3.1:-77928814 | MS.gene06303:CDS |
| ACGTGATGTTCCTAGTTTGC+TGG | 0.396679 | 3.1:-77929372 | MS.gene06303:intron |
| TCCCCTTCCAAGATAACCTT+CGG | 0.397061 | 3.1:+77928826 | None:intergenic |
| TTGCAAAGGCAAAGGATTGC+TGG | 0.398329 | 3.1:-77928980 | MS.gene06303:CDS |
| TCATTACCCGAAGGTTATCT+TGG | 0.398870 | 3.1:-77928833 | MS.gene06303:CDS |
| GCAAAGGATTGCTGGTCATA+TGG | 0.409083 | 3.1:-77928972 | MS.gene06303:CDS |
| CTACAGTGGAATAATTATTT+GGG | 0.411267 | 3.1:+77928888 | None:intergenic |
| TTGGAATACTATCTGATGTC+TGG | 0.411562 | 3.1:-77932157 | MS.gene06303:CDS |
| TTTCTGGGAGCCTTTCTAGC+AGG | 0.411656 | 3.1:-77931895 | MS.gene06303:CDS |
| ATATTTATCTGATTTGAAAT+CGG | 0.414588 | 3.1:-77929248 | MS.gene06303:CDS |
| GCGCGAGTAAATCATATGTA+TGG | 0.422901 | 3.1:-77928620 | MS.gene06303:CDS |
| GAAATGAATTCAGTACTGTC+TGG | 0.423324 | 3.1:+77929435 | None:intergenic |
| GCAGAAGCTGCAGATGCAGC+GGG | 0.429489 | 3.1:-77932094 | MS.gene06303:CDS |
| TATAGGCTTTGCTTCCTTGA+AGG | 0.429956 | 3.1:+77932227 | None:intergenic |
| AATTGGAGCGTCGGAGGCTG+TGG | 0.434220 | 3.1:+77932837 | None:intergenic |
| TTCTTTGGTTCTGGTTTCGA+TGG | 0.437893 | 3.1:+77932678 | None:intergenic |
| GAAATCGGTTGTCAACTGTT+TGG | 0.439288 | 3.1:-77929233 | MS.gene06303:CDS |
| GTTGTCCCAACATTATCAAT+TGG | 0.451819 | 3.1:+77928749 | None:intergenic |
| AGAAGGTGCGAGATTTCTCC+AGG | 0.452247 | 3.1:+77931923 | None:intergenic |
| TTGGTTCGTTTGAGCAAACC+TGG | 0.457585 | 3.1:-77931941 | MS.gene06303:CDS |
| CTGCAGATGCAGCGGGTGCA+TGG | 0.460899 | 3.1:-77932087 | MS.gene06303:CDS |
| GTATCCTTAAGTTTCCAATC+AGG | 0.461156 | 3.1:+77929178 | None:intergenic |
| GAATGAGGATATTGCCAACT+TGG | 0.462459 | 3.1:-77931960 | MS.gene06303:CDS |
| TGATTTACTCGCGCCGATGA+AGG | 0.466410 | 3.1:+77928629 | None:intergenic |
| CTTTGACAGAATAAAGCAAA+TGG | 0.469866 | 3.1:-77929274 | MS.gene06303:intron |
| TTCTGGGAGCCTTTCTAGCA+GGG | 0.472211 | 3.1:-77931894 | MS.gene06303:CDS |
| CGGCGCCAATATTTCGAAAT+CGG | 0.472556 | 3.1:-77932791 | MS.gene06303:CDS |
| TGCGGCGGTGGTGGTGCCTA+GGG | 0.474709 | 3.1:+77932648 | None:intergenic |
| TTTCTGGAGGGTAGATCCTA+TGG | 0.476468 | 3.1:-77928914 | MS.gene06303:CDS |
| CACAAATTGGATCTGTTTCA+GGG | 0.478297 | 3.1:-77928856 | MS.gene06303:CDS |
| TTGGAACATACCAGCAAACT+AGG | 0.480824 | 3.1:+77929362 | None:intergenic |
| GACTACATTTGCGGCGGTGG+TGG | 0.488105 | 3.1:+77932639 | None:intergenic |
| TGTGGCTATGGCAAGTGAAA+TGG | 0.488446 | 3.1:-77932038 | MS.gene06303:CDS |
| CCCCTTCCAAGATAACCTTC+GGG | 0.489106 | 3.1:+77928827 | None:intergenic |
| GCCAGAAAGTGGACCACCTA+TGG | 0.489341 | 3.1:+77928787 | None:intergenic |
| AAAGATATTCGTGATGTCAC+TGG | 0.492624 | 3.1:-77929139 | MS.gene06303:CDS |
| GCAAATGTAGTCACCGATAA+CGG | 0.493433 | 3.1:-77932628 | MS.gene06303:CDS |
| GGTGACTACATTTGCGGCGG+TGG | 0.493565 | 3.1:+77932636 | None:intergenic |
| TATTGGCGCCGGCGTCGTGT+TGG | 0.494195 | 3.1:+77932803 | None:intergenic |
| AGTTGTTGAAGCCCTTGACT+TGG | 0.495531 | 3.1:-77929492 | MS.gene06303:CDS |
| TACCCGAAGGTTATCTTGGA+AGG | 0.496100 | 3.1:-77928829 | MS.gene06303:CDS |
| GGTAGAAGAAGAAGTAGAAG+AGG | 0.496378 | 3.1:-77932467 | MS.gene06303:CDS |
| TACCTGAAACCCTGCTAGAA+AGG | 0.500118 | 3.1:+77931885 | None:intergenic |
| TTTGGCTACAGATATTGCTC+AGG | 0.503148 | 3.1:-77929534 | MS.gene06303:intron |
| ACACCAATAGAGTGATGATC+TGG | 0.505806 | 3.1:+77928566 | None:intergenic |
| ACTGAAGGTGATGCCACATA+AGG | 0.506366 | 3.1:+77929010 | None:intergenic |
| AAATGAATTCAGTACTGTCT+GGG | 0.506777 | 3.1:+77929436 | None:intergenic |
| GGCTCCCAGAAACGCGAAGA+AGG | 0.514592 | 3.1:+77931906 | None:intergenic |
| TCACTCTGATAGCCAGAAAG+TGG | 0.522292 | 3.1:+77928776 | None:intergenic |
| GTTATCGGTGACTACATTTG+CGG | 0.524174 | 3.1:+77932630 | None:intergenic |
| GATGAAGGGGCATTATCTTA+CGG | 0.524968 | 3.1:-77928683 | MS.gene06303:CDS |
| AGGAAGAGACTCGTTGTTGA+AGG | 0.526162 | 3.1:-77932064 | MS.gene06303:CDS |
| GGTTTCGATTCTGGTTCAGA+TGG | 0.528247 | 3.1:+77932595 | None:intergenic |
| ACATCTGCAGAAGGTTATGC+AGG | 0.529507 | 3.1:-77928593 | MS.gene06303:CDS |
| CCCGAAGGTTATCTTGGAAG+GGG | 0.529987 | 3.1:-77928827 | MS.gene06303:CDS |
| AGATTGCATAGTGTAGATGA+AGG | 0.531493 | 3.1:-77928698 | MS.gene06303:CDS |
| TGTTGAAGGTGGTGTGGCTA+TGG | 0.532741 | 3.1:-77932050 | MS.gene06303:CDS |
| CGGCGGAATTGGAGCGTCGG+AGG | 0.537861 | 3.1:+77932831 | None:intergenic |
| GGCAGAAGCTGCAGATGCAG+CGG | 0.539070 | 3.1:-77932095 | MS.gene06303:CDS |
| ATAATTATTTGGGTAGCCAT+AGG | 0.541652 | 3.1:+77928898 | None:intergenic |
| CGATTTCGAAATATTGGCGC+CGG | 0.545993 | 3.1:+77932792 | None:intergenic |
| CTCCGACGCTCCAATTCCGC+CGG | 0.546387 | 3.1:-77932830 | MS.gene06303:CDS |
| TTCCGGCGGAATTGGAGCGT+CGG | 0.547964 | 3.1:+77932828 | None:intergenic |
| TCAGAACCTCCGCCGTGACT+AGG | 0.551721 | 3.1:+77928542 | None:intergenic |
| ATATGCCAATTGATAATGTT+GGG | 0.551779 | 3.1:-77928754 | MS.gene06303:CDS |
| GGTGTTCCTAGTCACGGCGG+AGG | 0.554778 | 3.1:-77928548 | MS.gene06303:CDS |
| CTTTGCAAGGTAGTTACTGA+AGG | 0.554885 | 3.1:+77928995 | None:intergenic |
| TCGGTTGTCAACTGTTTGGA+AGG | 0.557298 | 3.1:-77929229 | MS.gene06303:CDS |
| ACCCGAAGGTTATCTTGGAA+GGG | 0.560476 | 3.1:-77928828 | MS.gene06303:CDS |
| AGCAATCCTTTGCCTTTGCA+AGG | 0.561026 | 3.1:+77928982 | None:intergenic |
| CGCGAGTAAATCATATGTAT+GGG | 0.563347 | 3.1:-77928619 | MS.gene06303:CDS |
| TTTGCTCAAACGAACCAAGT+TGG | 0.563876 | 3.1:+77931946 | None:intergenic |
| AGATCCGGAAGAAGAAGAAG+AGG | 0.570044 | 3.1:-77932491 | MS.gene06303:CDS |
| CAAAGGTATAAGCCAAGTCA+AGG | 0.575181 | 3.1:+77929480 | None:intergenic |
| TTGGCTACAGATATTGCTCA+GGG | 0.579896 | 3.1:-77929533 | MS.gene06303:intron |
| TCTATTGGTGTTCCTAGTCA+CGG | 0.581422 | 3.1:-77928554 | MS.gene06303:CDS |
| CCGGAAAACCAACACGACGC+CGG | 0.582426 | 3.1:-77932811 | MS.gene06303:CDS |
| TGGAAGGGGAGTGTCAATTG+GGG | 0.588303 | 3.1:-77928813 | MS.gene06303:CDS |
| AGGATTGCTGGTCATATGGA+TGG | 0.590466 | 3.1:-77928968 | MS.gene06303:CDS |
| AAACCGAAATCAATTGCTGA+TGG | 0.597725 | 3.1:-77932577 | MS.gene06303:CDS |
| TCCGGAAGAAGAAGAAGAGG+AGG | 0.599057 | 3.1:-77932488 | MS.gene06303:CDS |
| GATATGCCAATTGATAATGT+TGG | 0.599085 | 3.1:-77928755 | MS.gene06303:CDS |
| CGCTGTGAGAGATCCTTATG+TGG | 0.599605 | 3.1:-77929023 | MS.gene06303:CDS |
| GAAGGTTGTCCTACAAAACT+CGG | 0.601321 | 3.1:+77928647 | None:intergenic |
| GCTTGCCTCGCAGTAATCAT+CGG | 0.602636 | 3.1:+77932193 | None:intergenic |
| TAACTACCTTGCAAAGGCAA+AGG | 0.602902 | 3.1:-77928988 | MS.gene06303:CDS |
| AAGAGACTCGTTGTTGAAGG+TGG | 0.604637 | 3.1:-77932061 | MS.gene06303:CDS |
| ATTGCATAGTGTAGATGAAG+GGG | 0.606146 | 3.1:-77928696 | MS.gene06303:CDS |
| TTCCAGACACAAAACGAACA+AGG | 0.611479 | 3.1:-77929048 | MS.gene06303:CDS |
| AAATTGGTGTTTGAATGCAT+TGG | 0.613256 | 3.1:-77932259 | MS.gene06303:CDS |
| AAATTTCTCTTCAAACCCAA+AGG | 0.615925 | 3.1:+77929463 | None:intergenic |
| GTTTCAGGGTCATTACCCGA+AGG | 0.622716 | 3.1:-77928842 | MS.gene06303:CDS |
| GATTGCATAGTGTAGATGAA+GGG | 0.625547 | 3.1:-77928697 | MS.gene06303:CDS |
| ACCAAAGAACTCGAAGCCCT+AGG | 0.627329 | 3.1:-77932664 | MS.gene06303:CDS |
| TATGGGAGAACATCTGCAGA+AGG | 0.633484 | 3.1:-77928602 | MS.gene06303:CDS |
| ATCGGTGACTACATTTGCGG+CGG | 0.637660 | 3.1:+77932633 | None:intergenic |
| GGAAGGGGAGTGTCAATTGG+GGG | 0.638432 | 3.1:-77928812 | MS.gene06303:CDS |
| AAAGGTATAAGCCAAGTCAA+GGG | 0.641496 | 3.1:+77929481 | None:intergenic |
| TTGTGCAGCAGATGCTACAG+TGG | 0.649223 | 3.1:+77928874 | None:intergenic |
| CTTCAGTAACTACCTTGCAA+AGG | 0.651442 | 3.1:-77928994 | MS.gene06303:CDS |
| GCAAGTGAAATGGATGCAAG+AGG | 0.653741 | 3.1:-77932028 | MS.gene06303:CDS |
| GAGCGTCGGAGGCTGTGGAG+TGG | 0.654775 | 3.1:+77932842 | None:intergenic |
| GTATATACTTTCGCAAACCA+CGG | 0.657503 | 3.1:+77932356 | None:intergenic |
| CAGATGCAGCGGGTGCATGG+AGG | 0.661767 | 3.1:-77932084 | MS.gene06303:CDS |
| AATGAATTCAGTACTGTCTG+GGG | 0.662675 | 3.1:+77929437 | None:intergenic |
| TGCAAAACGATGAATAGCCG+TGG | 0.664115 | 3.1:-77932373 | MS.gene06303:CDS |
| ACTCGTTGTTGAAGGTGGTG+TGG | 0.682424 | 3.1:-77932056 | MS.gene06303:CDS |
| ATTGGTGTTCCTAGTCACGG+CGG | 0.753888 | 3.1:-77928551 | MS.gene06303:CDS |
| ACTCACCGATGATTACTGCG+AGG | 0.780604 | 3.1:-77932198 | MS.gene06303:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAGTTTCAAAAATTA+GGG | + | chr3.1:77930011-77930030 | None:intergenic | 10.0% |
| !! | TTTAAAAAGTTTCAAAAATT+AGG | + | chr3.1:77930012-77930031 | None:intergenic | 10.0% |
| !!! | TAATTATTCAATTTTAATCA+TGG | - | chr3.1:77929801-77929820 | MS.gene06303:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3.1:77929852-77929871 | None:intergenic | 100.0% |
| !! | AGAAATATACACAAAATTAA+AGG | + | chr3.1:77930502-77930521 | None:intergenic | 15.0% |
| !! | GAAATATACACAAAATTAAA+GGG | + | chr3.1:77930501-77930520 | None:intergenic | 15.0% |
| !! | TAAAAAGTTTCAAAAATTAG+GGG | + | chr3.1:77930010-77930029 | None:intergenic | 15.0% |
| !!! | AACTTTTTAAAATTTGTTGA+CGG | - | chr3.1:77930021-77930040 | MS.gene06303:intron | 15.0% |
| !!! | ATATTTATCTGATTTGAAAT+CGG | - | chr3.1:77932113-77932132 | MS.gene06303:CDS | 15.0% |
| !! | AACAAAATTAGCTACTTAAT+TGG | + | chr3.1:77932021-77932040 | None:intergenic | 20.0% |
| !! | ATATTTATTTATGCCCAAAA+AGG | + | chr3.1:77931167-77931186 | None:intergenic | 20.0% |
| !! | ATTCAATAGCTTAATCTAAA+AGG | - | chr3.1:77931442-77931461 | MS.gene06303:intron | 20.0% |
| !! | TTTATAGCCAAAATTTGAAT+CGG | + | chr3.1:77931220-77931239 | None:intergenic | 20.0% |
| !!! | ACATTTAGAACTTATTTTGA+TGG | - | chr3.1:77930885-77930904 | MS.gene06303:intron | 20.0% |
| !!! | ATTTTGAACTTGATTTTGAT+GGG | - | chr3.1:77930848-77930867 | MS.gene06303:intron | 20.0% |
| !!! | CATTTAGAACTTATTTTGAT+GGG | - | chr3.1:77930886-77930905 | MS.gene06303:intron | 20.0% |
| ! | AATTGAATGATCAAACATGT+GGG | + | chr3.1:77930083-77930102 | None:intergenic | 25.0% |
| ! | AGCAAATGATCAGATATAAA+GGG | + | chr3.1:77931544-77931563 | None:intergenic | 25.0% |
| ! | ATGAAAACTCTTATGTAAGA+TGG | - | chr3.1:77929672-77929691 | MS.gene06303:intron | 25.0% |
| ! | ATGTTGTTAATCTTAGATAG+TGG | + | chr3.1:77931096-77931115 | None:intergenic | 25.0% |
| ! | CAAAAATATGAGAAAGCAAA+AGG | + | chr3.1:77931757-77931776 | None:intergenic | 25.0% |
| ! | CTACAGTGGAATAATTATTT+GGG | + | chr3.1:77932476-77932495 | None:intergenic | 25.0% |
| ! | CTCAATTGACCTTAAATAAA+TGG | + | chr3.1:77931273-77931292 | None:intergenic | 25.0% |
| ! | GAACAAAAAGAAGAAGAAAA+AGG | - | chr3.1:77928949-77928968 | MS.gene06303:CDS | 25.0% |
| ! | TAAGGATACAATTCTCAAAT+TGG | - | chr3.1:77932197-77932216 | MS.gene06303:CDS | 25.0% |
| ! | TACAAAAGTCTAATGAAGTT+TGG | - | chr3.1:77931949-77931968 | MS.gene06303:CDS | 25.0% |
| ! | TCACAAATTTCAAATTGTAC+AGG | + | chr3.1:77929568-77929587 | None:intergenic | 25.0% |
| ! | TGTAGGATATATAATACTCA+TGG | - | chr3.1:77929524-77929543 | MS.gene06303:CDS | 25.0% |
| ! | TTATAGCCAAAATTTGAATC+GGG | + | chr3.1:77931219-77931238 | None:intergenic | 25.0% |
| !! | CATTTTGAACTTGATTTTGA+TGG | - | chr3.1:77930847-77930866 | MS.gene06303:intron | 25.0% |
| !! | CCATTAAAATCAAGTTCTAA+AGG | + | chr3.1:77930429-77930448 | None:intergenic | 25.0% |
| !!! | AAAATTTGTTGACGGTATAT+TGG | - | chr3.1:77930029-77930048 | MS.gene06303:intron | 25.0% |
| !!! | AATGTCACTGATTATTGTTT+TGG | - | chr3.1:77931809-77931828 | MS.gene06303:intron | 25.0% |
| !!! | ATATGCCAATTGATAATGTT+GGG | - | chr3.1:77932607-77932626 | MS.gene06303:CDS | 25.0% |
| !!! | CCTTTAGAACTTGATTTTAA+TGG | - | chr3.1:77930426-77930445 | MS.gene06303:intron | 25.0% |
| !!! | TTTTTTAGTCTTCACAACAT+CGG | - | chr3.1:77930574-77930593 | MS.gene06303:intron | 25.0% |
| !!! | TTTTTTGTTACGCTTCATAA+AGG | - | chr3.1:77932039-77932058 | MS.gene06303:CDS | 25.0% |
| AAAAATGGAACGTAAACTGA+AGG | - | chr3.1:77929245-77929264 | MS.gene06303:CDS | 30.0% | |
| AAAAGGAGGAAAAAATGCTT+TGG | - | chr3.1:77931459-77931478 | MS.gene06303:intron | 30.0% | |
| AAATGAATTCAGTACTGTCT+GGG | + | chr3.1:77931928-77931947 | None:intergenic | 30.0% | |
| AAATTTCTCTTCAAACCCAA+AGG | + | chr3.1:77931901-77931920 | None:intergenic | 30.0% | |
| AACCATGCAATTGCTTAAAA+AGG | + | chr3.1:77931395-77931414 | None:intergenic | 30.0% | |
| AGAAGAATAAACAGGAATAG+GGG | + | chr3.1:77931698-77931717 | None:intergenic | 30.0% | |
| AGAGTTTGAATAACATGAGA+AGG | + | chr3.1:77931601-77931620 | None:intergenic | 30.0% | |
| AGGCATTCATACAATCATTA+AGG | + | chr3.1:77931737-77931756 | None:intergenic | 30.0% | |
| ATAATTATTTGGGTAGCCAT+AGG | + | chr3.1:77932466-77932485 | None:intergenic | 30.0% | |
| ATGTATTGTATACATGCCTT+TGG | - | chr3.1:77929498-77929517 | MS.gene06303:CDS | 30.0% | |
| CAAATGATCAGATATAAAGG+GGG | + | chr3.1:77931542-77931561 | None:intergenic | 30.0% | |
| CAATAGCTTAATCTAAAAGG+AGG | - | chr3.1:77931445-77931464 | MS.gene06303:intron | 30.0% | |
| CAATTCAAGCTTTCAAAAAC+AGG | - | chr3.1:77928620-77928639 | MS.gene06303:CDS | 30.0% | |
| CAATTGAATGATCAAACATG+TGG | + | chr3.1:77930084-77930103 | None:intergenic | 30.0% | |
| CAGAAGAATAAACAGGAATA+GGG | + | chr3.1:77931699-77931718 | None:intergenic | 30.0% | |
| CATGTTTGATCATTCAATTG+TGG | - | chr3.1:77930084-77930103 | MS.gene06303:intron | 30.0% | |
| CTTTGACAGAATAAAGCAAA+TGG | - | chr3.1:77932087-77932106 | MS.gene06303:CDS | 30.0% | |
| GAGCAAATGATCAGATATAA+AGG | + | chr3.1:77931545-77931564 | None:intergenic | 30.0% | |
| GCAAATGATCAGATATAAAG+GGG | + | chr3.1:77931543-77931562 | None:intergenic | 30.0% | |
| GCTACAGTGGAATAATTATT+TGG | + | chr3.1:77932477-77932496 | None:intergenic | 30.0% | |
| GCTGAAATAGATTATTTGAG+AGG | + | chr3.1:77931370-77931389 | None:intergenic | 30.0% | |
| GGCATTCATACAATCATTAA+GGG | + | chr3.1:77931736-77931755 | None:intergenic | 30.0% | |
| TATATATCCTACATTCCCAA+AGG | + | chr3.1:77929517-77929536 | None:intergenic | 30.0% | |
| TGAAAAACAAACCAACAGTA+TGG | + | chr3.1:77929701-77929720 | None:intergenic | 30.0% | |
| TGATATGATTGTAAGAGCAA+TGG | - | chr3.1:77930759-77930778 | MS.gene06303:intron | 30.0% | |
| TGTATTGTATACATGCCTTT+GGG | - | chr3.1:77929499-77929518 | MS.gene06303:CDS | 30.0% | |
| TGTTGAAAGTGAAGCAAAAA+TGG | - | chr3.1:77929230-77929249 | MS.gene06303:CDS | 30.0% | |
| TTTATTTATGCCCAAAAAGG+AGG | + | chr3.1:77931164-77931183 | None:intergenic | 30.0% | |
| ! | AAATTGGTGTTTGAATGCAT+TGG | - | chr3.1:77929102-77929121 | MS.gene06303:CDS | 30.0% |
| ! | ATTGGTAGATTTTACCTTCA+AGG | - | chr3.1:77929120-77929139 | MS.gene06303:CDS | 30.0% |
| ! | CCATTAAAGTCAAGTTCTAA+AGG | + | chr3.1:77930811-77930830 | None:intergenic | 30.0% |
| ! | CTATCCGCTATAACATTTTT+GGG | - | chr3.1:77930605-77930624 | MS.gene06303:intron | 30.0% |
| ! | TATCCGCTATAACATTTTTG+GGG | - | chr3.1:77930606-77930625 | MS.gene06303:intron | 30.0% |
| ! | TCAAAAATTAGGGGTTTTAC+AGG | + | chr3.1:77930001-77930020 | None:intergenic | 30.0% |
| ! | TGTATGATGTATCTACGTTT+TGG | - | chr3.1:77931571-77931590 | MS.gene06303:intron | 30.0% |
| ! | TTCATTAACAGCACATTTTC+TGG | - | chr3.1:77932431-77932450 | MS.gene06303:CDS | 30.0% |
| !! | AAAAATGTTATAGCGGATAG+CGG | + | chr3.1:77930605-77930624 | None:intergenic | 30.0% |
| !! | AACATGTGGGTTACAATTTT+AGG | + | chr3.1:77930070-77930089 | None:intergenic | 30.0% |
| !! | ACAATTTTAGGTCACTCAAA+GGG | + | chr3.1:77930058-77930077 | None:intergenic | 30.0% |
| !! | ATTCACCGATTTCGAAATAT+TGG | + | chr3.1:77928578-77928597 | None:intergenic | 30.0% |
| !! | CCTTTAGAACTTGACTTTAA+TGG | - | chr3.1:77930808-77930827 | MS.gene06303:intron | 30.0% |
| !! | GATATGCCAATTGATAATGT+TGG | - | chr3.1:77932606-77932625 | MS.gene06303:CDS | 30.0% |
| !! | TACAATTTTAGGTCACTCAA+AGG | + | chr3.1:77930059-77930078 | None:intergenic | 30.0% |
| !! | TGATATGTTTTTGAGAGCAA+TGG | - | chr3.1:77930377-77930396 | MS.gene06303:intron | 30.0% |
| AAACCGAAATCAATTGCTGA+TGG | - | chr3.1:77928784-77928803 | MS.gene06303:CDS | 35.0% | |
| AAAGATATTCGTGATGTCAC+TGG | - | chr3.1:77932222-77932241 | MS.gene06303:CDS | 35.0% | |
| AACAGAACAGAGCAAGAATA+AGG | + | chr3.1:77930352-77930371 | None:intergenic | 35.0% | |
| AATAAATGGTCTGCGACAAA+TGG | + | chr3.1:77931259-77931278 | None:intergenic | 35.0% | |
| AATGAATTCAGTACTGTCTG+GGG | + | chr3.1:77931927-77931946 | None:intergenic | 35.0% | |
| ACAACAGTATGCTATACACA+GGG | + | chr3.1:77931302-77931321 | None:intergenic | 35.0% | |
| ACTGTTGTATTGTCTTAGAC+TGG | - | chr3.1:77931314-77931333 | MS.gene06303:intron | 35.0% | |
| AGAAGAAGAAGAAGAAGATC+CGG | - | chr3.1:77928855-77928874 | MS.gene06303:CDS | 35.0% | |
| AGATTGCATAGTGTAGATGA+AGG | - | chr3.1:77932663-77932682 | MS.gene06303:CDS | 35.0% | |
| AGGTTCGAAATAAGTATGAG+GGG | - | chr3.1:77929764-77929783 | MS.gene06303:intron | 35.0% | |
| ATTGCATAGTGTAGATGAAG+GGG | - | chr3.1:77932665-77932684 | MS.gene06303:CDS | 35.0% | |
| ATTTCGAACCTGATGTTAGT+AGG | + | chr3.1:77929755-77929774 | None:intergenic | 35.0% | |
| CACAAATTGGATCTGTTTCA+GGG | - | chr3.1:77932505-77932524 | MS.gene06303:CDS | 35.0% | |
| CAGGTTCGAAATAAGTATGA+GGG | - | chr3.1:77929763-77929782 | MS.gene06303:intron | 35.0% | |
| CGCGAGTAAATCATATGTAT+GGG | - | chr3.1:77932742-77932761 | MS.gene06303:CDS | 35.0% | |
| GAAATGAATTCAGTACTGTC+TGG | + | chr3.1:77931929-77931948 | None:intergenic | 35.0% | |
| GATTGCATAGTGTAGATGAA+GGG | - | chr3.1:77932664-77932683 | MS.gene06303:CDS | 35.0% | |
| GCAGAAGAATAAACAGGAAT+AGG | + | chr3.1:77931700-77931719 | None:intergenic | 35.0% | |
| GTATATACTTTCGCAAACCA+CGG | + | chr3.1:77929008-77929027 | None:intergenic | 35.0% | |
| GTATCCTTAAGTTTCCAATC+AGG | + | chr3.1:77932186-77932205 | None:intergenic | 35.0% | |
| GTGATCAGTGAAATAAGCTA+GGG | - | chr3.1:77929590-77929609 | MS.gene06303:intron | 35.0% | |
| GTTGTCCCAACATTATCAAT+TGG | + | chr3.1:77932615-77932634 | None:intergenic | 35.0% | |
| TAAGATGGAATCCATACTGT+TGG | - | chr3.1:77929687-77929706 | MS.gene06303:intron | 35.0% | |
| TACAACAGTATGCTATACAC+AGG | + | chr3.1:77931303-77931322 | None:intergenic | 35.0% | |
| TAGGATGCAGAAGAATAAAC+AGG | + | chr3.1:77931706-77931725 | None:intergenic | 35.0% | |
| TCAGGTTCGAAATAAGTATG+AGG | - | chr3.1:77929762-77929781 | MS.gene06303:intron | 35.0% | |
| TCTTCCTGATTGGAAACTTA+AGG | - | chr3.1:77932179-77932198 | MS.gene06303:CDS | 35.0% | |
| TCTTCTTCTTCTTCTTCTTC+AGG | + | chr3.1:77928832-77928851 | None:intergenic | 35.0% | |
| TGAGTATGTATGTATTCTGC+TGG | - | chr3.1:77930527-77930546 | MS.gene06303:intron | 35.0% | |
| TGGAACAATGTTACCGTTAT+CGG | + | chr3.1:77928749-77928768 | None:intergenic | 35.0% | |
| TGTCGCAGACCATTTATTTA+AGG | - | chr3.1:77931261-77931280 | MS.gene06303:intron | 35.0% | |
| TGTGATCAGTGAAATAAGCT+AGG | - | chr3.1:77929589-77929608 | MS.gene06303:intron | 35.0% | |
| TTCAACGTCCAAGAGAAAAT+TGG | - | chr3.1:77932260-77932279 | MS.gene06303:CDS | 35.0% | |
| TTGCAAAACTTCTTCCTGAT+TGG | - | chr3.1:77932169-77932188 | MS.gene06303:CDS | 35.0% | |
| TTGGAATACTATCTGATGTC+TGG | - | chr3.1:77929204-77929223 | MS.gene06303:CDS | 35.0% | |
| TTTCCCCAAAATTGCAATAG+CGG | + | chr3.1:77929976-77929995 | None:intergenic | 35.0% | |
| ! | AAAGGTATAAGCCAAGTCAA+GGG | + | chr3.1:77931883-77931902 | None:intergenic | 35.0% |
| ! | AATCATTAAGGGTGTGTGAT+AGG | + | chr3.1:77931725-77931744 | None:intergenic | 35.0% |
| ! | ATGATATCAGTCCTCCTTTT+TGG | - | chr3.1:77931150-77931169 | MS.gene06303:intron | 35.0% |
| ! | ATTAACAGCACATTTTCTGG+AGG | - | chr3.1:77932434-77932453 | MS.gene06303:CDS | 35.0% |
| ! | ATTGATTTCGGTTTCGATTC+TGG | + | chr3.1:77928778-77928797 | None:intergenic | 35.0% |
| ! | CATTCAAACACCAATTTTGC+CGG | + | chr3.1:77929099-77929118 | None:intergenic | 35.0% |
| ! | GCTATCCGCTATAACATTTT+TGG | - | chr3.1:77930604-77930623 | MS.gene06303:intron | 35.0% |
| ! | GCTTTTGTCCAATTTTCTCT+TGG | + | chr3.1:77932271-77932290 | None:intergenic | 35.0% |
| ! | TGATATCAGTCCTCCTTTTT+GGG | - | chr3.1:77931151-77931170 | MS.gene06303:intron | 35.0% |
| ! | TTAACAGCACATTTTCTGGA+GGG | - | chr3.1:77932435-77932454 | MS.gene06303:CDS | 35.0% |
| ! | TTGGGATTCATGGTGTTTTT+AGG | - | chr3.1:77929379-77929398 | MS.gene06303:CDS | 35.0% |
| ! | TTTTGTAGGACAACCTTCAT+CGG | - | chr3.1:77932719-77932738 | MS.gene06303:CDS | 35.0% |
| !! | AAAATGTTATAGCGGATAGC+GGG | + | chr3.1:77930604-77930623 | None:intergenic | 35.0% |
| !! | AATTTTAGGTCACTCAAAGG+GGG | + | chr3.1:77930056-77930075 | None:intergenic | 35.0% |
| !! | CAATTTTAGGTCACTCAAAG+GGG | + | chr3.1:77930057-77930076 | None:intergenic | 35.0% |
| !! | GACCTTTTTAAGCAATTGCA+TGG | - | chr3.1:77931390-77931409 | MS.gene06303:intron | 35.0% |
| !! | TCAAGTTCTAAAGGTACACT+TGG | + | chr3.1:77930420-77930439 | None:intergenic | 35.0% |
| !! | TTGACTTGGCTTATACCTTT+GGG | - | chr3.1:77931883-77931902 | MS.gene06303:intron | 35.0% |
| !!! | GCAAGCTTCAATTTTGGTTT+TGG | - | chr3.1:77929185-77929204 | MS.gene06303:CDS | 35.0% |
| !!! | TCATGGTGTTTTTAGGAATG+AGG | - | chr3.1:77929386-77929405 | MS.gene06303:CDS | 35.0% |
| !!! | TTTTTTAGTCTTCACAGCAC+CGG | - | chr3.1:77931025-77931044 | MS.gene06303:intron | 35.0% |
| AAACCTAAACAGAGCAACGA+TGG | + | chr3.1:77930298-77930317 | None:intergenic | 40.0% | |
| ACACCAATAGAGTGATGATC+TGG | + | chr3.1:77932798-77932817 | None:intergenic | 40.0% | |
| ATAAAGGGGGAATCTTTGCA+AGG | + | chr3.1:77931529-77931548 | None:intergenic | 40.0% | |
| CGACCCCAAAAATGTTATAG+CGG | + | chr3.1:77930612-77930631 | None:intergenic | 40.0% | |
| CTTCAGTAACTACCTTGCAA+AGG | - | chr3.1:77932367-77932386 | MS.gene06303:CDS | 40.0% | |
| CTTTGCAAGGTAGTTACTGA+AGG | + | chr3.1:77932369-77932388 | None:intergenic | 40.0% | |
| GAAATCGGTTGTCAACTGTT+TGG | - | chr3.1:77932128-77932147 | MS.gene06303:CDS | 40.0% | |
| GAAGGTTGTCCTACAAAACT+CGG | + | chr3.1:77932717-77932736 | None:intergenic | 40.0% | |
| GAATGAGGATATTGCCAACT+TGG | - | chr3.1:77929401-77929420 | MS.gene06303:CDS | 40.0% | |
| GATGCCAGTTCAGTTAGTTA+CGG | + | chr3.1:77931659-77931678 | None:intergenic | 40.0% | |
| GCAAATGTAGTCACCGATAA+CGG | - | chr3.1:77928733-77928752 | MS.gene06303:CDS | 40.0% | |
| GCACAAATTGGATCTGTTTC+AGG | - | chr3.1:77932504-77932523 | MS.gene06303:CDS | 40.0% | |
| GCGCGAGTAAATCATATGTA+TGG | - | chr3.1:77932741-77932760 | MS.gene06303:CDS | 40.0% | |
| GCTCAGGGAATGATGAAAAA+GGG | - | chr3.1:77931843-77931862 | MS.gene06303:intron | 40.0% | |
| GGTAGAAGAAGAAGTAGAAG+AGG | - | chr3.1:77928894-77928913 | MS.gene06303:CDS | 40.0% | |
| GTCGCTTAAGGAAAAAATCC+CGG | - | chr3.1:77929050-77929069 | MS.gene06303:CDS | 40.0% | |
| GTTATCGGTGACTACATTTG+CGG | + | chr3.1:77928734-77928753 | None:intergenic | 40.0% | |
| TAACTACCTTGCAAAGGCAA+AGG | - | chr3.1:77932373-77932392 | MS.gene06303:CDS | 40.0% | |
| TACGGTTGGAAACATGTCTA+GGG | + | chr3.1:77931641-77931660 | None:intergenic | 40.0% | |
| TATAGGCTTTGCTTCCTTGA+AGG | + | chr3.1:77929137-77929156 | None:intergenic | 40.0% | |
| TCATTACCCGAAGGTTATCT+TGG | - | chr3.1:77932528-77932547 | MS.gene06303:CDS | 40.0% | |
| TCTCCTTGATCGTTCAATTG+TGG | - | chr3.1:77930239-77930258 | MS.gene06303:intron | 40.0% | |
| TGCTCAGGGAATGATGAAAA+AGG | - | chr3.1:77931842-77931861 | MS.gene06303:intron | 40.0% | |
| TTACGGTTGGAAACATGTCT+AGG | + | chr3.1:77931642-77931661 | None:intergenic | 40.0% | |
| TTCCAGACACAAAACGAACA+AGG | - | chr3.1:77932313-77932332 | MS.gene06303:CDS | 40.0% | |
| TTGCCAGATCATCACTCTAT+TGG | - | chr3.1:77932792-77932811 | MS.gene06303:CDS | 40.0% | |
| TTGGAACATACCAGCAAACT+AGG | + | chr3.1:77932002-77932021 | None:intergenic | 40.0% | |
| TTGGCTACAGATATTGCTCA+GGG | - | chr3.1:77931828-77931847 | MS.gene06303:intron | 40.0% | |
| TTTGCTCAAACGAACCAAGT+TGG | + | chr3.1:77929418-77929437 | None:intergenic | 40.0% | |
| TTTGGCTACAGATATTGCTC+AGG | - | chr3.1:77931827-77931846 | MS.gene06303:intron | 40.0% | |
| ! | ACTCTTTTTCTTGCGTGCTT+TGG | - | chr3.1:77929360-77929379 | MS.gene06303:intron | 40.0% |
| ! | ATACATGCCTTTGGGAATGT+AGG | - | chr3.1:77929507-77929526 | MS.gene06303:CDS | 40.0% |
| ! | ATCGTTGCTCTGTTTAGGTT+TGG | - | chr3.1:77930297-77930316 | MS.gene06303:intron | 40.0% |
| ! | ATGGCCGCTATTGCAATTTT+GGG | - | chr3.1:77929969-77929988 | MS.gene06303:intron | 40.0% |
| ! | ATGGTTCTGCAGTTTATGGT+GGG | - | chr3.1:77931409-77931428 | MS.gene06303:intron | 40.0% |
| ! | CAAAGGTATAAGCCAAGTCA+AGG | + | chr3.1:77931884-77931903 | None:intergenic | 40.0% |
| ! | CTACTCTAAAGGTGATTCAC+GGG | + | chr3.1:77929919-77929938 | None:intergenic | 40.0% |
| ! | CTCTTTTTCTTGCGTGCTTT+GGG | - | chr3.1:77929361-77929380 | MS.gene06303:intron | 40.0% |
| ! | GCTACTCTAAAGGTGATTCA+CGG | + | chr3.1:77929920-77929939 | None:intergenic | 40.0% |
| ! | TAAAGGTACACTTGCAGAAC+CGG | + | chr3.1:77930794-77930813 | None:intergenic | 40.0% |
| ! | TAAAGGTACACTTGGAGAAC+CGG | + | chr3.1:77930412-77930431 | None:intergenic | 40.0% |
| ! | TAGGGGTACAATCAGATAGT+TGG | + | chr3.1:77931681-77931700 | None:intergenic | 40.0% |
| ! | TCGCCATCAGCAATTGATTT+CGG | + | chr3.1:77928790-77928809 | None:intergenic | 40.0% |
| ! | TCGTTGCTCTGTTTAGGTTT+GGG | - | chr3.1:77930298-77930317 | MS.gene06303:intron | 40.0% |
| ! | TCTATTGGTGTTCCTAGTCA+CGG | - | chr3.1:77932807-77932826 | MS.gene06303:CDS | 40.0% |
| ! | TCTGAGCCCGATTCAAATTT+TGG | - | chr3.1:77931210-77931229 | MS.gene06303:intron | 40.0% |
| ! | TTGCATGGTTCTGCAGTTTA+TGG | - | chr3.1:77931405-77931424 | MS.gene06303:intron | 40.0% |
| !! | CATCGGTGAGTTTGTTGTAT+AGG | + | chr3.1:77929154-77929173 | None:intergenic | 40.0% |
| !! | CTTGACTTGGCTTATACCTT+TGG | - | chr3.1:77931882-77931901 | MS.gene06303:intron | 40.0% |
| !! | GATGAAGGGGCATTATCTTA+CGG | - | chr3.1:77932678-77932697 | MS.gene06303:CDS | 40.0% |
| !! | GTGAATCACCTTTAGAGTAG+CGG | - | chr3.1:77929919-77929938 | MS.gene06303:intron | 40.0% |
| !! | TTCTTTGGTTCTGGTTTCGA+TGG | + | chr3.1:77928686-77928705 | None:intergenic | 40.0% |
| !!! | CGCTATAACATTTTTGGGGT+CGG | - | chr3.1:77930610-77930629 | MS.gene06303:intron | 40.0% |
| !!! | GGGATTTTTTCCTTAAGCGA+CGG | + | chr3.1:77929051-77929070 | None:intergenic | 40.0% |
| AACCCTAAACAGAGCAACGA+TGG | + | chr3.1:77930679-77930698 | None:intergenic | 45.0% | |
| AAGAGACTCGTTGTTGAAGG+TGG | - | chr3.1:77929300-77929319 | MS.gene06303:intron | 45.0% | |
| AAGGTGATTCACGGGCTTAA+TGG | + | chr3.1:77929911-77929930 | None:intergenic | 45.0% | |
| ACATCTGCAGAAGGTTATGC+AGG | - | chr3.1:77932768-77932787 | MS.gene06303:CDS | 45.0% | |
| ACCCGAAGGTTATCTTGGAA+GGG | - | chr3.1:77932533-77932552 | MS.gene06303:CDS | 45.0% | |
| ACCTCCTCTTCTTCTTCTTC+CGG | + | chr3.1:77928877-77928896 | None:intergenic | 45.0% | |
| ACGGTTGGAAACATGTCTAG+GGG | + | chr3.1:77931640-77931659 | None:intergenic | 45.0% | |
| ACTGAAGGTGATGCCACATA+AGG | + | chr3.1:77932354-77932373 | None:intergenic | 45.0% | |
| AGATCCGGAAGAAGAAGAAG+AGG | - | chr3.1:77928870-77928889 | MS.gene06303:CDS | 45.0% | |
| AGCAATCCTTTGCCTTTGCA+AGG | + | chr3.1:77932382-77932401 | None:intergenic | 45.0% | |
| AGGAAGAGACTCGTTGTTGA+AGG | - | chr3.1:77929297-77929316 | MS.gene06303:intron | 45.0% | |
| AGGATTGCTGGTCATATGGA+TGG | - | chr3.1:77932393-77932412 | MS.gene06303:CDS | 45.0% | |
| AGGCCACAATTGAACGATCA+AGG | + | chr3.1:77930245-77930264 | None:intergenic | 45.0% | |
| AGTTGTTGAAGCCCTTGACT+TGG | - | chr3.1:77931869-77931888 | MS.gene06303:intron | 45.0% | |
| CAAAACAGAGCACGAACAAG+AGG | + | chr3.1:77930265-77930284 | None:intergenic | 45.0% | |
| CAATTGCACCGCTACTCTAA+AGG | + | chr3.1:77929930-77929949 | None:intergenic | 45.0% | |
| CCAACCGTAACTAACTGAAC+TGG | - | chr3.1:77931652-77931671 | MS.gene06303:intron | 45.0% | |
| CCAGTTCAGTTAGTTACGGT+TGG | + | chr3.1:77931655-77931674 | None:intergenic | 45.0% | |
| CGATTTCGAAATATTGGCGC+CGG | + | chr3.1:77928572-77928591 | None:intergenic | 45.0% | |
| CGGCGCCAATATTTCGAAAT+CGG | - | chr3.1:77928570-77928589 | MS.gene06303:CDS | 45.0% | |
| GAAGAACTCAAACGAGAGCA+AGG | + | chr3.1:77930190-77930209 | None:intergenic | 45.0% | |
| GAATCGGGCTCAGAAATAAC+AGG | + | chr3.1:77931204-77931223 | None:intergenic | 45.0% | |
| GCAAAGGATTGCTGGTCATA+TGG | - | chr3.1:77932389-77932408 | MS.gene06303:CDS | 45.0% | |
| GCAAGTGAAATGGATGCAAG+AGG | - | chr3.1:77929333-77929352 | MS.gene06303:intron | 45.0% | |
| GCACTGTATCACGCTATTGA+CGG | + | chr3.1:77929833-77929852 | None:intergenic | 45.0% | |
| GCTTAAGGAAAAAATCCCGG+TGG | - | chr3.1:77929053-77929072 | MS.gene06303:CDS | 45.0% | |
| GTCTGCGACAAATGGTTAGT+GGG | + | chr3.1:77931251-77931270 | None:intergenic | 45.0% | |
| GTTACCAGCCTACTAACATC+AGG | - | chr3.1:77929744-77929763 | MS.gene06303:intron | 45.0% | |
| TACCCGAAGGTTATCTTGGA+AGG | - | chr3.1:77932532-77932551 | MS.gene06303:CDS | 45.0% | |
| TACCTGAAACCCTGCTAGAA+AGG | + | chr3.1:77929479-77929498 | None:intergenic | 45.0% | |
| TATGGGAGAACATCTGCAGA+AGG | - | chr3.1:77932759-77932778 | MS.gene06303:CDS | 45.0% | |
| TCACTCTGATAGCCAGAAAG+TGG | + | chr3.1:77932588-77932607 | None:intergenic | 45.0% | |
| TCCCCTTCCAAGATAACCTT+CGG | + | chr3.1:77932538-77932557 | None:intergenic | 45.0% | |
| TCGGTTGTCAACTGTTTGGA+AGG | - | chr3.1:77932132-77932151 | MS.gene06303:CDS | 45.0% | |
| TCTGCGACAAATGGTTAGTG+GGG | + | chr3.1:77931250-77931269 | None:intergenic | 45.0% | |
| TGCAAAACGATGAATAGCCG+TGG | - | chr3.1:77928988-77929007 | MS.gene06303:CDS | 45.0% | |
| TGCCATCGTTGCTCTGTTTA+GGG | - | chr3.1:77930293-77930312 | MS.gene06303:intron | 45.0% | |
| TGTGGCTATGGCAAGTGAAA+TGG | - | chr3.1:77929323-77929342 | MS.gene06303:intron | 45.0% | |
| TTAGAGTAGCGGTGCAATTG+TGG | - | chr3.1:77929930-77929949 | MS.gene06303:intron | 45.0% | |
| TTGCAAAGGCAAAGGATTGC+TGG | - | chr3.1:77932381-77932400 | MS.gene06303:CDS | 45.0% | |
| TTGGAAACATGTCTAGGGGA+GGG | + | chr3.1:77931636-77931655 | None:intergenic | 45.0% | |
| ! | ACGTGATGTTCCTAGTTTGC+TGG | - | chr3.1:77931989-77932008 | MS.gene06303:CDS | 45.0% |
| ! | CATGGTTCTGCAGTTTATGG+TGG | - | chr3.1:77931408-77931427 | MS.gene06303:intron | 45.0% |
| ! | CGTTGCTCTGTTTAGGGTTA+GGG | - | chr3.1:77930680-77930699 | MS.gene06303:intron | 45.0% |
| ! | GATGGCCGCTATTGCAATTT+TGG | - | chr3.1:77929968-77929987 | MS.gene06303:intron | 45.0% |
| ! | TCGTTGCTCTGTTTAGGGTT+AGG | - | chr3.1:77930679-77930698 | MS.gene06303:intron | 45.0% |
| ! | TGCGAGGCAAGCTTCAATTT+TGG | - | chr3.1:77929179-77929198 | MS.gene06303:CDS | 45.0% |
| ! | TGGCCGCTATTGCAATTTTG+GGG | - | chr3.1:77929970-77929989 | MS.gene06303:intron | 45.0% |
| ! | TTGGTTCGTTTGAGCAAACC+TGG | - | chr3.1:77929420-77929439 | MS.gene06303:CDS | 45.0% |
| ! | TTTCTGGAGGGTAGATCCTA+TGG | - | chr3.1:77932447-77932466 | MS.gene06303:CDS | 45.0% |
| !! | GGTTTCGATTCTGGTTCAGA+TGG | + | chr3.1:77928769-77928788 | None:intergenic | 45.0% |
| !! | TGCCTTGTTCGTTTTGTGTC+TGG | + | chr3.1:77932318-77932337 | None:intergenic | 45.0% |
| !! | TTGGAAGGGGAGTGTCAATT+GGG | - | chr3.1:77932547-77932566 | MS.gene06303:CDS | 45.0% |
| !!! | AACACCAATTTTGCCGGTTC+CGG | + | chr3.1:77929093-77929112 | None:intergenic | 45.0% |
| AACAACAATGCCAGCAGAGC+AGG | + | chr3.1:77930220-77930239 | None:intergenic | 50.0% | |
| AACGAGAGCAGAGAAGAACG+AGG | + | chr3.1:77930129-77930148 | None:intergenic | 50.0% | |
| ACCAAAGAACTCGAAGCCCT+AGG | - | chr3.1:77928697-77928716 | MS.gene06303:CDS | 50.0% | |
| ACGAGAGCAGAGAAGAACGA+GGG | + | chr3.1:77930128-77930147 | None:intergenic | 50.0% | |
| ACTCACCGATGATTACTGCG+AGG | - | chr3.1:77929163-77929182 | MS.gene06303:CDS | 50.0% | |
| ACTCGTTGTTGAAGGTGGTG+TGG | - | chr3.1:77929305-77929324 | MS.gene06303:intron | 50.0% | |
| AGAGCAATGGCATCATCCTC+CGG | - | chr3.1:77930390-77930409 | MS.gene06303:intron | 50.0% | |
| ATCGGTGACTACATTTGCGG+CGG | + | chr3.1:77928731-77928750 | None:intergenic | 50.0% | |
| CCCCTTCCAAGATAACCTTC+GGG | + | chr3.1:77932537-77932556 | None:intergenic | 50.0% | |
| CCCGAAGGTTATCTTGGAAG+GGG | - | chr3.1:77932534-77932553 | MS.gene06303:CDS | 50.0% | |
| CGAACCTGATGTTAGTAGGC+TGG | + | chr3.1:77929751-77929770 | None:intergenic | 50.0% | |
| CGCTGTGAGAGATCCTTATG+TGG | - | chr3.1:77932338-77932357 | MS.gene06303:CDS | 50.0% | |
| CGGGCTCAGAAATAACAGGT+GGG | + | chr3.1:77931200-77931219 | None:intergenic | 50.0% | |
| CTGCCATCGTTGCTCTGTTT+AGG | - | chr3.1:77930292-77930311 | MS.gene06303:intron | 50.0% | |
| GATTCACGGGCTTAATGGCA+TGG | + | chr3.1:77929906-77929925 | None:intergenic | 50.0% | |
| GCTTGCCTCGCAGTAATCAT+CGG | + | chr3.1:77929171-77929190 | None:intergenic | 50.0% | |
| GGTCTGCGACAAATGGTTAG+TGG | + | chr3.1:77931252-77931271 | None:intergenic | 50.0% | |
| GTTGGAAACATGTCTAGGGG+AGG | + | chr3.1:77931637-77931656 | None:intergenic | 50.0% | |
| GTTTCAGGGTCATTACCCGA+AGG | - | chr3.1:77932519-77932538 | MS.gene06303:CDS | 50.0% | |
| TCCGGAAGAAGAAGAAGAGG+AGG | - | chr3.1:77928873-77928892 | MS.gene06303:CDS | 50.0% | |
| TCGGGCTCAGAAATAACAGG+TGG | + | chr3.1:77931201-77931220 | None:intergenic | 50.0% | |
| TGCAATTGTGGCGCCATACA+CGG | - | chr3.1:77929942-77929961 | MS.gene06303:intron | 50.0% | |
| TGTTGAAGGTGGTGTGGCTA+TGG | - | chr3.1:77929311-77929330 | MS.gene06303:intron | 50.0% | |
| TTCTCTGTTTCCTGCTCTGC+TGG | - | chr3.1:77930207-77930226 | MS.gene06303:intron | 50.0% | |
| ! | AATCCCGGTGGCACTGAAAA+AGG | - | chr3.1:77929065-77929084 | MS.gene06303:CDS | 50.0% |
| ! | AGAAGGTGCGAGATTTCTCC+AGG | + | chr3.1:77929441-77929460 | None:intergenic | 50.0% |
| ! | AGCCTTTCTAGCAGGGTTTC+AGG | - | chr3.1:77929474-77929493 | MS.gene06303:CDS | 50.0% |
| ! | ATCGTTTTGCACAGCGAGTG+AGG | + | chr3.1:77928979-77928998 | None:intergenic | 50.0% |
| ! | ATCTGAAACGCCGTCGCTTA+AGG | - | chr3.1:77929038-77929057 | MS.gene06303:CDS | 50.0% |
| ! | ATTGGTGTTCCTAGTCACGG+CGG | - | chr3.1:77932810-77932829 | MS.gene06303:CDS | 50.0% |
| ! | GGCTTCGAGTTCTTTGGTTC+TGG | + | chr3.1:77928695-77928714 | None:intergenic | 50.0% |
| ! | TGATTTACTCGCGCCGATGA+AGG | + | chr3.1:77932735-77932754 | None:intergenic | 50.0% |
| ! | TTCTGGGAGCCTTTCTAGCA+GGG | - | chr3.1:77929467-77929486 | MS.gene06303:CDS | 50.0% |
| ! | TTTCTGGGAGCCTTTCTAGC+AGG | - | chr3.1:77929466-77929485 | MS.gene06303:CDS | 50.0% |
| !! | CTTGCGTGCTTTGGGATTCA+TGG | - | chr3.1:77929369-77929388 | MS.gene06303:intron | 50.0% |
| !! | CTTGGAAGGGGAGTGTCAAT+TGG | - | chr3.1:77932546-77932565 | MS.gene06303:CDS | 50.0% |
| !! | TCAGTCGAGCCGAGTTTTGT+AGG | - | chr3.1:77932705-77932724 | MS.gene06303:CDS | 50.0% |
| !! | TGGAAGGGGAGTGTCAATTG+GGG | - | chr3.1:77932548-77932567 | MS.gene06303:CDS | 50.0% |
| !!! | TGTTGGTTTTCCGGCGGAAT+TGG | + | chr3.1:77928544-77928563 | None:intergenic | 50.0% |
| AGCGGCCATCAAACCGTGTA+TGG | + | chr3.1:77929958-77929977 | None:intergenic | 55.0% | |
| AGGTACACTTGCAGAACCGG+AGG | + | chr3.1:77930791-77930810 | None:intergenic | 55.0% | |
| AGGTACACTTGGAGAACCGG+AGG | + | chr3.1:77930409-77930428 | None:intergenic | 55.0% | |
| ATGTCTAGGGGAGGGTGGTT+AGG | + | chr3.1:77931628-77931647 | None:intergenic | 55.0% | |
| CGCACCTTCTTCGCGTTTCT+GGG | - | chr3.1:77929451-77929470 | MS.gene06303:CDS | 55.0% | |
| GAAACATGTCTAGGGGAGGG+TGG | + | chr3.1:77931633-77931652 | None:intergenic | 55.0% | |
| GCCAGAAAGTGGACCACCTA+TGG | + | chr3.1:77932577-77932596 | None:intergenic | 55.0% | |
| GCCATAGGTGGTCCACTTTC+TGG | - | chr3.1:77932573-77932592 | MS.gene06303:CDS | 55.0% | |
| GTGTCAATTGGGGGAGCCAT+AGG | - | chr3.1:77932558-77932577 | MS.gene06303:CDS | 55.0% | |
| TCAATTGGGGGAGCCATAGG+TGG | - | chr3.1:77932561-77932580 | MS.gene06303:CDS | 55.0% | |
| TCGCACCTTCTTCGCGTTTC+TGG | - | chr3.1:77929450-77929469 | MS.gene06303:CDS | 55.0% | |
| TGGCGCCATACACGGTTTGA+TGG | - | chr3.1:77929950-77929969 | MS.gene06303:intron | 55.0% | |
| ! | GCCTAGGGCTTCGAGTTCTT+TGG | + | chr3.1:77928701-77928720 | None:intergenic | 55.0% |
| !! | ACTGAAAAAGGCGCCGGAAC+CGG | - | chr3.1:77929077-77929096 | MS.gene06303:CDS | 55.0% |
| !! | GGAAGGGGAGTGTCAATTGG+GGG | - | chr3.1:77932549-77932568 | MS.gene06303:CDS | 55.0% |
| !!! | TTTTTGGGGTCGGTGCTACG+TGG | - | chr3.1:77930620-77930639 | MS.gene06303:intron | 55.0% |
| AATGGCATGGCCGTGGAGGA+GGG | + | chr3.1:77929893-77929912 | None:intergenic | 60.0% | |
| CACACACACACCCTCCTCCA+CGG | - | chr3.1:77929880-77929899 | MS.gene06303:intron | 60.0% | |
| CCGGAAAACCAACACGACGC+CGG | - | chr3.1:77928550-77928569 | MS.gene06303:CDS | 60.0% | |
| GACTACATTTGCGGCGGTGG+TGG | + | chr3.1:77928725-77928744 | None:intergenic | 60.0% | |
| GCAGAAGCTGCAGATGCAGC+GGG | - | chr3.1:77929267-77929286 | MS.gene06303:CDS | 60.0% | |
| GCTTAATGGCATGGCCGTGG+AGG | + | chr3.1:77929897-77929916 | None:intergenic | 60.0% | |
| GGCAGAAGCTGCAGATGCAG+CGG | - | chr3.1:77929266-77929285 | MS.gene06303:CDS | 60.0% | |
| GGCTCCCAGAAACGCGAAGA+AGG | + | chr3.1:77929458-77929477 | None:intergenic | 60.0% | |
| GGTGACTACATTTGCGGCGG+TGG | + | chr3.1:77928728-77928747 | None:intergenic | 60.0% | |
| TAATGGCATGGCCGTGGAGG+AGG | + | chr3.1:77929894-77929913 | None:intergenic | 60.0% | |
| TCAGAACCTCCGCCGTGACT+AGG | + | chr3.1:77932822-77932841 | None:intergenic | 60.0% | |
| TTCCGGCGGAATTGGAGCGT+CGG | + | chr3.1:77928536-77928555 | None:intergenic | 60.0% | |
| ! | AGGAGGGTGTGTGTGTGTGG+GGG | + | chr3.1:77929877-77929896 | None:intergenic | 60.0% |
| ! | GAAGAACGAGGGCACGACGA+TGG | + | chr3.1:77930117-77930136 | None:intergenic | 60.0% |
| ! | GAGGAGGGTGTGTGTGTGTG+GGG | + | chr3.1:77929878-77929897 | None:intergenic | 60.0% |
| ! | GGAGGAGGGTGTGTGTGTGT+GGG | + | chr3.1:77929879-77929898 | None:intergenic | 60.0% |
| ! | GGTGGCACTGAAAAAGGCGC+CGG | - | chr3.1:77929071-77929090 | MS.gene06303:CDS | 60.0% |
| ! | TGGAGGAGGGTGTGTGTGTG+TGG | + | chr3.1:77929880-77929899 | None:intergenic | 60.0% |
| !! | AATTGGAGCGTCGGAGGCTG+TGG | + | chr3.1:77928527-77928546 | None:intergenic | 60.0% |
| !! | ATAGCGGATAGCGGGATCGC+CGG | + | chr3.1:77931047-77931066 | None:intergenic | 60.0% |
| !!! | CCGGCGTCGTGTTGGTTTTC+CGG | + | chr3.1:77928553-77928572 | None:intergenic | 60.0% |
| !!! | GCGCCTTTTTCAGTGCCACC+GGG | + | chr3.1:77929071-77929090 | None:intergenic | 60.0% |
| !!! | GCGTCGTGTTGGTTTTCCGG+CGG | + | chr3.1:77928550-77928569 | None:intergenic | 60.0% |
| !!! | GGCGCCTTTTTCAGTGCCAC+CGG | + | chr3.1:77929072-77929091 | None:intergenic | 60.0% |
| AGGGTGTGTGTGTGTGGGGG+GGG | + | chr3.1:77929874-77929893 | None:intergenic | 65.0% | |
| CAGATGCAGCGGGTGCATGG+AGG | - | chr3.1:77929277-77929296 | MS.gene06303:intron | 65.0% | |
| CGGGCTTAATGGCATGGCCG+TGG | + | chr3.1:77929900-77929919 | None:intergenic | 65.0% | |
| CTCCGACGCTCCAATTCCGC+CGG | - | chr3.1:77928531-77928550 | MS.gene06303:CDS | 65.0% | |
| CTGCAGATGCAGCGGGTGCA+TGG | - | chr3.1:77929274-77929293 | MS.gene06303:intron | 65.0% | |
| GGTGTTCCTAGTCACGGCGG+AGG | - | chr3.1:77932813-77932832 | MS.gene06303:CDS | 65.0% | |
| ! | GAGGGCACGACGATGGAGAG+AGG | + | chr3.1:77930110-77930129 | None:intergenic | 65.0% |
| ! | GAGGGTGTGTGTGTGTGGGG+GGG | + | chr3.1:77929875-77929894 | None:intergenic | 65.0% |
| ! | GGAGGGTGTGTGTGTGTGGG+GGG | + | chr3.1:77929876-77929895 | None:intergenic | 65.0% |
| ! | GGCGCCGGAACCGGCAAAAT+TGG | - | chr3.1:77929086-77929105 | MS.gene06303:CDS | 65.0% |
| !! | TATTGGCGCCGGCGTCGTGT+TGG | + | chr3.1:77928561-77928580 | None:intergenic | 65.0% |
| GGGTGTGTGTGTGTGGGGGG+GGG | + | chr3.1:77929873-77929892 | None:intergenic | 70.0% | |
| GGTGTGTGTGTGTGGGGGGG+GGG | + | chr3.1:77929872-77929891 | None:intergenic | 70.0% | |
| GTGTGTGTGTGTGGGGGGGG+GGG | + | chr3.1:77929871-77929890 | None:intergenic | 70.0% | |
| TGTGTGTGTGTGGGGGGGGG+GGG | + | chr3.1:77929870-77929889 | None:intergenic | 70.0% | |
| ! | TGCGGCGGTGGTGGTGCCTA+GGG | + | chr3.1:77928716-77928735 | None:intergenic | 70.0% |
| ! | TTGCGGCGGTGGTGGTGCCT+AGG | + | chr3.1:77928717-77928736 | None:intergenic | 70.0% |
| !! | CGGCGGAATTGGAGCGTCGG+AGG | + | chr3.1:77928533-77928552 | None:intergenic | 70.0% |
| !! | GAGCGTCGGAGGCTGTGGAG+TGG | + | chr3.1:77928522-77928541 | None:intergenic | 70.0% |
| GTGTGTGTGTGGGGGGGGGG+GGG | + | chr3.1:77929869-77929888 | None:intergenic | 75.0% | |
| TGTGTGTGTGGGGGGGGGGG+GGG | + | chr3.1:77929868-77929887 | None:intergenic | 75.0% | |
| ! | GTGTGTGTGGGGGGGGGGGG+GGG | + | chr3.1:77929867-77929886 | None:intergenic | 80.0% |
| ! | TGTGTGTGGGGGGGGGGGGG+GGG | + | chr3.1:77929866-77929885 | None:intergenic | 80.0% |
| ! | GTGTGTGGGGGGGGGGGGGG+GGG | + | chr3.1:77929865-77929884 | None:intergenic | 85.0% |
| ! | TGTGTGGGGGGGGGGGGGGG+GGG | + | chr3.1:77929864-77929883 | None:intergenic | 85.0% |
| ! | GTGTGGGGGGGGGGGGGGGG+GGG | + | chr3.1:77929863-77929882 | None:intergenic | 90.0% |
| ! | TGTGGGGGGGGGGGGGGGGG+GGG | + | chr3.1:77929862-77929881 | None:intergenic | 90.0% |
| ! | GTGGGGGGGGGGGGGGGGGG+GGG | + | chr3.1:77929861-77929880 | None:intergenic | 95.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr3.1:77929860-77929879 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 77928505 | 77932878 | 77928505 | ID=MS.gene06303 |
| chr3.1 | mRNA | 77928505 | 77932878 | 77928505 | ID=MS.gene06303.t1;Parent=MS.gene06303 |
| chr3.1 | exon | 77931888 | 77932878 | 77931888 | ID=MS.gene06303.t1.exon1;Parent=MS.gene06303.t1 |
| chr3.1 | CDS | 77931888 | 77932878 | 77931888 | ID=cds.MS.gene06303.t1;Parent=MS.gene06303.t1 |
| chr3.1 | exon | 77929373 | 77929545 | 77929373 | ID=MS.gene06303.t1.exon2;Parent=MS.gene06303.t1 |
| chr3.1 | CDS | 77929373 | 77929545 | 77929373 | ID=cds.MS.gene06303.t1;Parent=MS.gene06303.t1 |
| chr3.1 | exon | 77928505 | 77929287 | 77928505 | ID=MS.gene06303.t1.exon3;Parent=MS.gene06303.t1 |
| chr3.1 | CDS | 77928505 | 77929287 | 77928505 | ID=cds.MS.gene06303.t1;Parent=MS.gene06303.t1 |
| Gene Sequence |
| Protein sequence |
