Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20932.t1 | XP_013469122.1 | 87.6 | 282 | 25 | 4 | 1 | 280 | 1 | 274 | 8.90E-128 | 466.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20932.t1 | A0A072VYK4 | 87.6 | 282 | 25 | 4 | 1 | 280 | 1 | 274 | 6.4e-128 | 466.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene20932 | 0.8305 | 2.84E-55 | -1.69E-46 |
| MS.gene049171 | MS.gene20932 | 0.849791 | 2.58E-60 | -1.69E-46 |
| MS.gene049222 | MS.gene20932 | 0.842677 | 2.23E-58 | -1.69E-46 |
| MS.gene049257 | MS.gene20932 | 0.811056 | 8.47E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene20932 | 0.804682 | 1.92E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene20932 | 0.857817 | 1.26E-62 | -1.69E-46 |
| MS.gene050323 | MS.gene20932 | 0.803214 | 3.88E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene20932 | 0.833705 | 4.57E-56 | -1.69E-46 |
| MS.gene050577 | MS.gene20932 | 0.889873 | 1.64E-73 | -1.69E-46 |
| MS.gene050699 | MS.gene20932 | 0.824289 | 8.75E-54 | -1.69E-46 |
| MS.gene050747 | MS.gene20932 | 0.84204 | 3.30E-58 | -1.69E-46 |
| MS.gene05080 | MS.gene20932 | 0.812386 | 4.35E-51 | -1.69E-46 |
| MS.gene05081 | MS.gene20932 | 0.804825 | 1.79E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene20932 | 0.8155 | 8.96E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene20932 | 0.813904 | 2.02E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene20932 | 0.858849 | 6.21E-63 | -1.69E-46 |
| MS.gene050950 | MS.gene20932 | 0.830627 | 2.64E-55 | -1.69E-46 |
| MS.gene051317 | MS.gene20932 | 0.826852 | 2.16E-54 | -1.69E-46 |
| MS.gene051438 | MS.gene20932 | 0.806588 | 7.65E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene20932 | 0.818205 | 2.21E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene20932 | 0.851117 | 1.09E-60 | -1.69E-46 |
| MS.gene051941 | MS.gene20932 | 0.805787 | 1.13E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene20932 | 0.864917 | 8.61E-65 | -1.69E-46 |
| MS.gene052482 | MS.gene20932 | 0.819503 | 1.12E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene20932 | 0.827779 | 1.30E-54 | -1.69E-46 |
| MS.gene052494 | MS.gene20932 | -0.808765 | 2.64E-50 | -1.69E-46 |
| MS.gene052501 | MS.gene20932 | 0.826006 | 3.44E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene20932 | 0.853704 | 2.00E-61 | -1.69E-46 |
| MS.gene052505 | MS.gene20932 | 0.811949 | 5.42E-51 | -1.69E-46 |
| MS.gene052606 | MS.gene20932 | -0.801363 | 9.33E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene20932 | 0.855196 | 7.42E-62 | -1.69E-46 |
| MS.gene052825 | MS.gene20932 | 0.861438 | 1.03E-63 | -1.69E-46 |
| MS.gene052966 | MS.gene20932 | 0.800249 | 1.57E-48 | -1.69E-46 |
| MS.gene053097 | MS.gene20932 | -0.822703 | 2.06E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene20932 | 0.858511 | 7.83E-63 | -1.69E-46 |
| MS.gene053421 | MS.gene20932 | -0.82306 | 1.70E-53 | -1.69E-46 |
| MS.gene053436 | MS.gene20932 | 0.836528 | 8.88E-57 | -1.69E-46 |
| MS.gene053480 | MS.gene20932 | 0.829057 | 6.37E-55 | -1.69E-46 |
| MS.gene053626 | MS.gene20932 | 0.810258 | 1.26E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene20932 | 0.827031 | 1.96E-54 | -1.69E-46 |
| MS.gene053824 | MS.gene20932 | 0.81278 | 3.57E-51 | -1.69E-46 |
| MS.gene054344 | MS.gene20932 | 0.818417 | 1.98E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene20932 | 0.803463 | 3.44E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene20932 | 0.800152 | 1.65E-48 | -1.69E-46 |
| MS.gene05470 | MS.gene20932 | 0.879955 | 8.16E-70 | -1.69E-46 |
| MS.gene054851 | MS.gene20932 | -0.80057 | 1.35E-48 | -1.69E-46 |
| MS.gene054884 | MS.gene20932 | -0.818849 | 1.58E-52 | -1.69E-46 |
| MS.gene054927 | MS.gene20932 | 0.814624 | 1.40E-51 | -1.69E-46 |
| MS.gene055159 | MS.gene20932 | -0.804601 | 2.00E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene20932 | 0.812479 | 4.15E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene20932 | 0.815856 | 7.46E-52 | -1.69E-46 |
| MS.gene055577 | MS.gene20932 | 0.857687 | 1.38E-62 | -1.69E-46 |
| MS.gene055729 | MS.gene20932 | -0.802834 | 4.65E-49 | -1.69E-46 |
| MS.gene055731 | MS.gene20932 | -0.814466 | 1.52E-51 | -1.69E-46 |
| MS.gene055748 | MS.gene20932 | 0.832705 | 8.12E-56 | -1.69E-46 |
| MS.gene055750 | MS.gene20932 | 0.81719 | 3.75E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene20932 | 0.815321 | 9.82E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene20932 | 0.850462 | 1.67E-60 | -1.69E-46 |
| MS.gene056040 | MS.gene20932 | 0.84879 | 4.90E-60 | -1.69E-46 |
| MS.gene056166 | MS.gene20932 | 0.814197 | 1.74E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene20932 | 0.828237 | 1.01E-54 | -1.69E-46 |
| MS.gene056510 | MS.gene20932 | 0.804264 | 2.35E-49 | -1.69E-46 |
| MS.gene056610 | MS.gene20932 | 0.814894 | 1.22E-51 | -1.69E-46 |
| MS.gene056647 | MS.gene20932 | -0.802814 | 4.69E-49 | -1.69E-46 |
| MS.gene05666 | MS.gene20932 | 0.800503 | 1.40E-48 | -1.69E-46 |
| MS.gene056692 | MS.gene20932 | 0.810782 | 9.71E-51 | -1.69E-46 |
| MS.gene057048 | MS.gene20932 | 0.80762 | 4.62E-50 | -1.69E-46 |
| MS.gene057332 | MS.gene20932 | 0.812543 | 4.02E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene20932 | 0.859331 | 4.45E-63 | -1.69E-46 |
| MS.gene057831 | MS.gene20932 | 0.838616 | 2.59E-57 | -1.69E-46 |
| MS.gene05787 | MS.gene20932 | 0.809282 | 2.04E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene20932 | -0.823035 | 1.72E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene20932 | 0.802374 | 5.78E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene20932 | 0.826065 | 3.33E-54 | -1.69E-46 |
| MS.gene058418 | MS.gene20932 | -0.827514 | 1.50E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene20932 | 0.809472 | 1.86E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene20932 | 0.845583 | 3.71E-59 | -1.69E-46 |
| MS.gene058838 | MS.gene20932 | 0.858489 | 7.96E-63 | -1.69E-46 |
| MS.gene059023 | MS.gene20932 | 0.860395 | 2.13E-63 | -1.69E-46 |
| MS.gene059103 | MS.gene20932 | -0.851132 | 1.08E-60 | -1.69E-46 |
| MS.gene05914 | MS.gene20932 | 0.822541 | 2.24E-53 | -1.69E-46 |
| MS.gene059303 | MS.gene20932 | 0.837995 | 3.74E-57 | -1.69E-46 |
| MS.gene059480 | MS.gene20932 | -0.852421 | 4.67E-61 | -1.69E-46 |
| MS.gene05960 | MS.gene20932 | -0.826462 | 2.68E-54 | -1.69E-46 |
| MS.gene059667 | MS.gene20932 | 0.824779 | 6.71E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene20932 | 0.809945 | 1.47E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene20932 | 0.822098 | 2.84E-53 | -1.69E-46 |
| MS.gene059756 | MS.gene20932 | 0.822641 | 2.12E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene20932 | 0.817808 | 2.72E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene20932 | 0.855515 | 5.99E-62 | -1.69E-46 |
| MS.gene060762 | MS.gene20932 | 0.827155 | 1.83E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene20932 | 0.805913 | 1.06E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene20932 | 0.854053 | 1.59E-61 | -1.69E-46 |
| MS.gene06080 | MS.gene20932 | -0.809186 | 2.14E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene20932 | 0.826461 | 2.68E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene20932 | 0.831925 | 1.27E-55 | -1.69E-46 |
| MS.gene061150 | MS.gene20932 | 0.818365 | 2.04E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20932.t1 | MTR_1g085550 | 87.589 | 282 | 25 | 4 | 1 | 280 | 1 | 274 | 4.36e-176 | 486 |
| MS.gene20932.t1 | MTR_8g094800 | 37.975 | 158 | 82 | 4 | 106 | 262 | 107 | 249 | 2.64e-20 | 90.9 |
| MS.gene20932.t1 | MTR_8g094800 | 29.545 | 176 | 100 | 5 | 99 | 270 | 350 | 505 | 1.18e-14 | 74.3 |
| MS.gene20932.t1 | MTR_8g094800 | 37.975 | 158 | 82 | 4 | 106 | 262 | 107 | 249 | 2.78e-20 | 90.9 |
| MS.gene20932.t1 | MTR_8g094800 | 29.545 | 176 | 100 | 5 | 99 | 270 | 350 | 505 | 7.07e-15 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20932.t1 | AT4G01650 | 60.204 | 196 | 72 | 3 | 84 | 275 | 16 | 209 | 6.99e-81 | 243 |
| MS.gene20932.t1 | AT4G01650 | 60.204 | 196 | 72 | 3 | 84 | 275 | 93 | 286 | 7.12e-80 | 243 |
| MS.gene20932.t1 | AT4G01650 | 64.885 | 131 | 42 | 2 | 84 | 212 | 93 | 221 | 6.53e-56 | 180 |
| MS.gene20932.t1 | AT5G08720 | 38.415 | 164 | 85 | 4 | 106 | 268 | 97 | 245 | 1.25e-22 | 97.8 |
| MS.gene20932.t1 | AT5G08720 | 27.717 | 184 | 111 | 4 | 99 | 280 | 328 | 491 | 1.23e-13 | 71.2 |
Find 70 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCACCCCTTACGGATTTA+AGG | 0.163287 | 1.3:+60738825 | None:intergenic |
| CTGCAAGAGTCGAGCAAAAT+TGG | 0.187080 | 1.3:+60741450 | None:intergenic |
| ATCATCATCGGTGTCGTTTA+AGG | 0.240676 | 1.3:+60741708 | None:intergenic |
| AACGACACCGATGATGATTC+TGG | 0.246364 | 1.3:-60741703 | MS.gene20932:CDS |
| TGATGATTCTGGGACTTTAT+TGG | 0.289143 | 1.3:-60741692 | MS.gene20932:CDS |
| TTCAGCTCTTCGAAGGAAAA+TGG | 0.305062 | 1.3:-60739684 | MS.gene20932:CDS |
| AGGTTGGCTGATTTCATTCC+TGG | 0.313493 | 1.3:-60741505 | MS.gene20932:CDS |
| CTCAGTAAATTGATCCAAAA+AGG | 0.327199 | 1.3:-60741475 | MS.gene20932:CDS |
| GGAGAGCAGAACTTGGCATT+TGG | 0.347544 | 1.3:-60739814 | MS.gene20932:CDS |
| ACGCTTCACTTGATTCCATT+TGG | 0.351261 | 1.3:-60741549 | MS.gene20932:CDS |
| GAGAGCAGAACTTGGCATTT+GGG | 0.357576 | 1.3:-60739813 | MS.gene20932:CDS |
| AGAGAAGAAAAGGGTGGAAA+TGG | 0.362769 | 1.3:+60741828 | None:intergenic |
| CGAAGATGTGGTTGCCCGTT+CGG | 0.371633 | 1.3:-60738886 | MS.gene20932:CDS |
| AGGAAAGTTTGCGTGGAAAC+TGG | 0.376996 | 1.3:+60741880 | None:intergenic |
| TCGGTGTCGTTTAAGGTGGT+TGG | 0.404356 | 1.3:+60741715 | None:intergenic |
| CGGTGTCGTTTAAGGTGGTT+GGG | 0.405611 | 1.3:+60741716 | None:intergenic |
| TCAGAGTCGTTGGTTGAAGA+TGG | 0.419018 | 1.3:-60741643 | MS.gene20932:CDS |
| TTTCTGAGCTTCACCCCTTA+CGG | 0.425093 | 1.3:+60738817 | None:intergenic |
| TAAGGTGGTTGGGTTGTGTT+TGG | 0.430644 | 1.3:+60741726 | None:intergenic |
| CTACCCTCTATCAGCCGAAC+GGG | 0.437593 | 1.3:+60738872 | None:intergenic |
| GGGTTAAAATTTGATGCTAA+AGG | 0.447148 | 1.3:-60739793 | MS.gene20932:CDS |
| ATCAGTCAAGATATTCCAAA+TGG | 0.452946 | 1.3:+60741534 | None:intergenic |
| CGAACGGGCAACCACATCTT+CGG | 0.459917 | 1.3:+60738887 | None:intergenic |
| GTCGTGTTAATTTCTCGAAC+CGG | 0.460132 | 1.3:+60738935 | None:intergenic |
| TGCAAGAGTCGAGCAAAATT+GGG | 0.469520 | 1.3:+60741451 | None:intergenic |
| GTTGCCCGTTCGGCTGATAG+AGG | 0.471438 | 1.3:-60738876 | MS.gene20932:CDS |
| CAGAGTCGTTGGTTGAAGAT+GGG | 0.478415 | 1.3:-60741642 | MS.gene20932:CDS |
| ATAGACTTCAAGATGATTGA+AGG | 0.479763 | 1.3:-60739712 | MS.gene20932:CDS |
| CTTGACTGATTATGAAAGGT+TGG | 0.487454 | 1.3:-60741521 | MS.gene20932:CDS |
| GAGGGTGTGAAATGAAAAGG+GGG | 0.500049 | 1.3:+60741802 | None:intergenic |
| ACGACACCGATGATGATTCT+GGG | 0.503280 | 1.3:-60741702 | MS.gene20932:CDS |
| AAAAGAACCTTAAATCCGTA+AGG | 0.508599 | 1.3:-60738832 | MS.gene20932:CDS |
| GTGAGGGTGTGAAATGAAAA+GGG | 0.510813 | 1.3:+60741800 | None:intergenic |
| GGTGAGGGTGTGAAATGAAA+AGG | 0.512236 | 1.3:+60741799 | None:intergenic |
| GAAATGGAAGCCGGTGGTGA+TGG | 0.514183 | 1.3:+60741844 | None:intergenic |
| AGTTGAAGATTCAGAGTCGT+TGG | 0.518855 | 1.3:-60741653 | MS.gene20932:CDS |
| GAATTGGAGACTCTTCCATC+TGG | 0.520472 | 1.3:-60739748 | MS.gene20932:CDS |
| TGAGGGTGTGAAATGAAAAG+GGG | 0.522808 | 1.3:+60741801 | None:intergenic |
| TGGAAGTTGTGAGGACTCTC+CGG | 0.533175 | 1.3:-60738954 | MS.gene20932:CDS |
| ACAGATTGGAGAGCAGAACT+TGG | 0.540322 | 1.3:-60739821 | MS.gene20932:intron |
| CCCTCTTCAACCATCACCAC+CGG | 0.549271 | 1.3:-60741854 | MS.gene20932:CDS |
| AAAGAACCTTAAATCCGTAA+GGG | 0.553093 | 1.3:-60738831 | MS.gene20932:CDS |
| GATGTTTAACGAACATGACT+TGG | 0.555776 | 1.3:+60741777 | None:intergenic |
| TAGACTTCAAGATGATTGAA+GGG | 0.561714 | 1.3:-60739711 | MS.gene20932:CDS |
| GCCGGTGGTGATGGTTGAAG+AGG | 0.565263 | 1.3:+60741853 | None:intergenic |
| ATTCACGCAGAATTGAGTCT+AGG | 0.570895 | 1.3:-60741582 | MS.gene20932:CDS |
| AGAGTCGTTGGTTGAAGATG+GGG | 0.585019 | 1.3:-60741641 | MS.gene20932:CDS |
| AGGGAGTAGGAAAGTTTGCG+TGG | 0.586983 | 1.3:+60741873 | None:intergenic |
| ATCATCGGTGTCGTTTAAGG+TGG | 0.588547 | 1.3:+60741711 | None:intergenic |
| TTGGAAGCGCGATACAAAGA+AGG | 0.590076 | 1.3:+60741745 | None:intergenic |
| TTGCCCGTTCGGCTGATAGA+GGG | 0.591142 | 1.3:-60738875 | MS.gene20932:CDS |
| ATGTCACGCTTCATACCAGA+TGG | 0.591702 | 1.3:+60739733 | None:intergenic |
| AACGAACATGACTTGGGTGA+GGG | 0.599864 | 1.3:+60741784 | None:intergenic |
| ATATCTTGACTGATTATGAA+AGG | 0.602548 | 1.3:-60741525 | MS.gene20932:CDS |
| TGGGACTTTATTGGTGACAG+AGG | 0.604754 | 1.3:-60741683 | MS.gene20932:CDS |
| AAAAGGGTGGAAATGGAAGC+CGG | 0.605384 | 1.3:+60741835 | None:intergenic |
| ATGTTTAACGAACATGACTT+GGG | 0.610648 | 1.3:+60741778 | None:intergenic |
| AGACTTCAAGATGATTGAAG+GGG | 0.615498 | 1.3:-60739710 | MS.gene20932:CDS |
| AATTTACTGAGGGCAAGACC+AGG | 0.620856 | 1.3:+60741487 | None:intergenic |
| AAGAACCTTAAATCCGTAAG+GGG | 0.627039 | 1.3:-60738830 | MS.gene20932:CDS |
| CCGGTGGTGATGGTTGAAGA+GGG | 0.627951 | 1.3:+60741854 | None:intergenic |
| TAACGAACATGACTTGGGTG+AGG | 0.630441 | 1.3:+60741783 | None:intergenic |
| GTGATGGTTGAAGAGGGAGT+AGG | 0.631455 | 1.3:+60741860 | None:intergenic |
| TCTACCCTCTATCAGCCGAA+CGG | 0.635039 | 1.3:+60738871 | None:intergenic |
| TTTCAGCGATGGAAGTTGTG+AGG | 0.646341 | 1.3:-60738963 | MS.gene20932:CDS |
| TAAAGTCCCAGAATCATCAT+CGG | 0.654239 | 1.3:+60741696 | None:intergenic |
| GGGGTGAGAGAAGAAAAGGG+TGG | 0.670192 | 1.3:+60741822 | None:intergenic |
| TTGATGTTAAGCCGAAGATG+TGG | 0.693995 | 1.3:-60738898 | MS.gene20932:CDS |
| AGGGTGTGAAATGAAAAGGG+GGG | 0.736177 | 1.3:+60741803 | None:intergenic |
| AGGGTGGAAATGGAAGCCGG+TGG | 0.769057 | 1.3:+60741838 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGAAGAAAAAAAAAAAT+AGG | - | chr1.3:60740211-60740230 | MS.gene20932:intron | 10.0% |
| !!! | ACTTTTCATTTTTTATTAAT+CGG | - | chr1.3:60739359-60739378 | MS.gene20932:intron | 10.0% |
| !! | TAAAATTTACATAAACTTAG+TGG | - | chr1.3:60741395-60741414 | MS.gene20932:intron | 15.0% |
| !! | TCGAAAACAAAATAAAAATA+AGG | + | chr1.3:60741204-60741223 | None:intergenic | 15.0% |
| !! | TTGTAATTAAAAGTAAAAAC+AGG | - | chr1.3:60741322-60741341 | MS.gene20932:intron | 15.0% |
| !! | TTGTTTATATTGCAAATTTA+GGG | + | chr1.3:60739970-60739989 | None:intergenic | 15.0% |
| !! | TTTGTTTATATTGCAAATTT+AGG | + | chr1.3:60739971-60739990 | None:intergenic | 15.0% |
| !!! | ACTTGATTTTATTAAATTCA+CGG | - | chr1.3:60739692-60739711 | MS.gene20932:CDS | 15.0% |
| !!! | ATTGTTATTTTCATCAAATA+CGG | - | chr1.3:60740083-60740102 | MS.gene20932:intron | 15.0% |
| !!! | ATTTTCTTGAAAAGTAAATT+TGG | - | chr1.3:60740792-60740811 | MS.gene20932:intron | 15.0% |
| !!! | CTTTTCATTTTTTATTAATC+GGG | - | chr1.3:60739360-60739379 | MS.gene20932:intron | 15.0% |
| !!! | TTATGTAAATTTTAGAAACT+AGG | + | chr1.3:60741389-60741408 | None:intergenic | 15.0% |
| !! | AATTGCACATATTGAAAATT+GGG | + | chr1.3:60741573-60741592 | None:intergenic | 20.0% |
| !! | ATTCTAGATATAAAAGTAGT+AGG | - | chr1.3:60739717-60739736 | MS.gene20932:CDS | 20.0% |
| !! | GGTTAAAATTAAACTGTATA+TGG | - | chr1.3:60740597-60740616 | MS.gene20932:intron | 20.0% |
| !! | TGGTGAAAATAATGAAAAAT+TGG | + | chr1.3:60741249-60741268 | None:intergenic | 20.0% |
| !!! | AAACTGTATAGTTCTAAATA+GGG | - | chr1.3:60739813-60739832 | MS.gene20932:CDS | 20.0% |
| !!! | AAATAAGGTATCATTTAAAG+AGG | + | chr1.3:60741189-60741208 | None:intergenic | 20.0% |
| !!! | AAATGCTGTATTTTATAGTT+TGG | - | chr1.3:60739911-60739930 | MS.gene20932:intron | 20.0% |
| !!! | ACAATTTTTTAAACCAAACA+TGG | - | chr1.3:60741362-60741381 | MS.gene20932:intron | 20.0% |
| !!! | AGGATATGATTTTGAATATT+AGG | - | chr1.3:60740576-60740595 | MS.gene20932:intron | 20.0% |
| !!! | TAGGAATTACTCTAATTTTT+TGG | + | chr1.3:60739495-60739514 | None:intergenic | 20.0% |
| !!! | TATGTTTTAGCATTTAAAAC+CGG | + | chr1.3:60740122-60740141 | None:intergenic | 20.0% |
| ! | AAAAACAGGAGTTGAAAATT+AGG | - | chr1.3:60741336-60741355 | MS.gene20932:intron | 25.0% |
| ! | AATAATACAACCTAGAAAGT+AGG | + | chr1.3:60739514-60739533 | None:intergenic | 25.0% |
| ! | AGATATAAAAGTAGTAGGAA+GGG | - | chr1.3:60739722-60739741 | MS.gene20932:CDS | 25.0% |
| ! | ATATCTTGACTGATTATGAA+AGG | - | chr1.3:60739145-60739164 | MS.gene20932:intron | 25.0% |
| ! | ATATTGTATTAGTGTTGTGT+TGG | - | chr1.3:60739326-60739345 | MS.gene20932:intron | 25.0% |
| ! | ATTGCACATATTGAAAATTG+GGG | + | chr1.3:60741572-60741591 | None:intergenic | 25.0% |
| ! | CAATTGCACATATTGAAAAT+TGG | + | chr1.3:60741574-60741593 | None:intergenic | 25.0% |
| ! | TAACTATACCTTTAAACTGT+GGG | - | chr1.3:60740446-60740465 | MS.gene20932:intron | 25.0% |
| ! | TAACTTGGAGAAAGTAAATT+AGG | + | chr1.3:60740687-60740706 | None:intergenic | 25.0% |
| ! | TAGATATAAAAGTAGTAGGA+AGG | - | chr1.3:60739721-60739740 | MS.gene20932:CDS | 25.0% |
| ! | TATGATTTCCATATATGTCA+TGG | - | chr1.3:60740381-60740400 | MS.gene20932:intron | 25.0% |
| ! | TATTGTATTAGTGTTGTGTT+GGG | - | chr1.3:60739327-60739346 | MS.gene20932:intron | 25.0% |
| ! | TTAAAATAAAAAGCCACTCA+TGG | + | chr1.3:60740299-60740318 | None:intergenic | 25.0% |
| !! | CATTGAATTTCTAAAGGTTA+AGG | + | chr1.3:60740713-60740732 | None:intergenic | 25.0% |
| !! | CTTAACCTTTAGAAATTCAA+TGG | - | chr1.3:60740711-60740730 | MS.gene20932:intron | 25.0% |
| !! | GTTTTCAATTCAATGTAGTT+TGG | - | chr1.3:60740026-60740045 | MS.gene20932:intron | 25.0% |
| !! | TTAGAACTATACAGTTTGTT+TGG | + | chr1.3:60739810-60739829 | None:intergenic | 25.0% |
| !! | TTTTTGGATCAATTTACTGA+GGG | + | chr1.3:60739196-60739215 | None:intergenic | 25.0% |
| !!! | AACAAAAGTCTTATTGATTG+AGG | - | chr1.3:60739985-60740004 | MS.gene20932:intron | 25.0% |
| !!! | ACAAAAGTCTTATTGATTGA+GGG | - | chr1.3:60739986-60740005 | MS.gene20932:intron | 25.0% |
| !!! | AGATTGTTTTGAGAAAGAAT+TGG | - | chr1.3:60740906-60740925 | MS.gene20932:intron | 25.0% |
| !!! | ATTACATTTTGAAACCATGT+AGG | - | chr1.3:60741619-60741638 | MS.gene20932:CDS | 25.0% |
| !!! | CAAACTGTATAGTTCTAAAT+AGG | - | chr1.3:60739812-60739831 | MS.gene20932:CDS | 25.0% |
| !!! | TTCATTTTTTATTAATCGGG+CGG | - | chr1.3:60739363-60739382 | MS.gene20932:intron | 25.0% |
| !!! | TTGGATTTTTAGAACTGAAT+AGG | - | chr1.3:60741141-60741160 | MS.gene20932:intron | 25.0% |
| AAAAGAACCTTAAATCCGTA+AGG | - | chr1.3:60741838-60741857 | MS.gene20932:CDS | 30.0% | |
| AAAGAACCTTAAATCCGTAA+GGG | - | chr1.3:60741839-60741858 | MS.gene20932:CDS | 30.0% | |
| AATATCAACATTGTTGAGCT+AGG | + | chr1.3:60739414-60739433 | None:intergenic | 30.0% | |
| ATAGACTTCAAGATGATTGA+AGG | - | chr1.3:60740958-60740977 | MS.gene20932:intron | 30.0% | |
| ATAGGTCAACATGATTATGT+TGG | - | chr1.3:60740229-60740248 | MS.gene20932:intron | 30.0% | |
| ATATCAACATTGTTGAGCTA+GGG | + | chr1.3:60739413-60739432 | None:intergenic | 30.0% | |
| ATCAGTCAAGATATTCCAAA+TGG | + | chr1.3:60739139-60739158 | None:intergenic | 30.0% | |
| ATGATTATATGCCATGAAGT+AGG | + | chr1.3:60740335-60740354 | None:intergenic | 30.0% | |
| ATGTTTAACGAACATGACTT+GGG | + | chr1.3:60738895-60738914 | None:intergenic | 30.0% | |
| CAGAAGAATTCTAATAAGAG+GGG | + | chr1.3:60741042-60741061 | None:intergenic | 30.0% | |
| CATAACTTCCATGACATATA+TGG | + | chr1.3:60740392-60740411 | None:intergenic | 30.0% | |
| CCAGAAGAATTCTAATAAGA+GGG | + | chr1.3:60741043-60741062 | None:intergenic | 30.0% | |
| CTCAGTAAATTGATCCAAAA+AGG | - | chr1.3:60739195-60739214 | MS.gene20932:intron | 30.0% | |
| GATATAAAAGTAGTAGGAAG+GGG | - | chr1.3:60739723-60739742 | MS.gene20932:CDS | 30.0% | |
| GGGTTAAAATTTGATGCTAA+AGG | - | chr1.3:60740877-60740896 | MS.gene20932:intron | 30.0% | |
| GTAACTATACCTTTAAACTG+TGG | - | chr1.3:60740445-60740464 | MS.gene20932:intron | 30.0% | |
| GTTCCATTATCTTAACAGAT+TGG | - | chr1.3:60740835-60740854 | MS.gene20932:intron | 30.0% | |
| TAAAGGTTAAGGTTGTAACT+TGG | + | chr1.3:60740702-60740721 | None:intergenic | 30.0% | |
| TAGACTTCAAGATGATTGAA+GGG | - | chr1.3:60740959-60740978 | MS.gene20932:intron | 30.0% | |
| TAGAGTAATTCCTACTTTCT+AGG | - | chr1.3:60739501-60739520 | MS.gene20932:intron | 30.0% | |
| TCAAACCAAATTTACGAACA+GGG | + | chr1.3:60740769-60740788 | None:intergenic | 30.0% | |
| TCCAGAAGAATTCTAATAAG+AGG | + | chr1.3:60741044-60741063 | None:intergenic | 30.0% | |
| TCTCCAATCTGTTAAGATAA+TGG | + | chr1.3:60740841-60740860 | None:intergenic | 30.0% | |
| TGCTTTAACAGTAACACTTT+AGG | + | chr1.3:60740269-60740288 | None:intergenic | 30.0% | |
| TTATTGCCCATTATGTGTAT+TGG | - | chr1.3:60739529-60739548 | MS.gene20932:intron | 30.0% | |
| TTCAAACCAAATTTACGAAC+AGG | + | chr1.3:60740770-60740789 | None:intergenic | 30.0% | |
| TTCTTATCTACTCTAGTATG+AGG | + | chr1.3:60740198-60740217 | None:intergenic | 30.0% | |
| TTGACATAAAATGACCTTGT+TGG | + | chr1.3:60739764-60739783 | None:intergenic | 30.0% | |
| TTGTGTCCAATACACATAAT+GGG | + | chr1.3:60739538-60739557 | None:intergenic | 30.0% | |
| ! | AAGTGTTACTGTTAAAGCAT+AGG | - | chr1.3:60740270-60740289 | MS.gene20932:intron | 30.0% |
| ! | CTTTTTGGATCAATTTACTG+AGG | + | chr1.3:60739197-60739216 | None:intergenic | 30.0% |
| ! | TATATTGCAAATTTAGGGCA+AGG | + | chr1.3:60739965-60739984 | None:intergenic | 30.0% |
| ! | TTTTTCCCTGTTCGTAAATT+TGG | - | chr1.3:60740761-60740780 | MS.gene20932:intron | 30.0% |
| !! | CAAAAGTCTTATTGATTGAG+GGG | - | chr1.3:60739987-60740006 | MS.gene20932:intron | 30.0% |
| !! | CGCAAGTATTTTTCAAATGT+TGG | - | chr1.3:60741122-60741141 | MS.gene20932:intron | 30.0% |
| !! | TTTTGGTAACCAACTACAAA+TGG | - | chr1.3:60741434-60741453 | MS.gene20932:intron | 30.0% |
| !!! | TCATTTTTTATTAATCGGGC+GGG | - | chr1.3:60739364-60739383 | MS.gene20932:intron | 30.0% |
| !!! | TTGGTTTTGCTTCTTTGTAA+TGG | - | chr1.3:60739930-60739949 | MS.gene20932:intron | 30.0% |
| AAATGGAGTGCATCTTATCT+TGG | - | chr1.3:60741451-60741470 | MS.gene20932:CDS | 35.0% | |
| AAGAACCTTAAATCCGTAAG+GGG | - | chr1.3:60741840-60741859 | MS.gene20932:CDS | 35.0% | |
| ACATAAAATGACCTTGTTGG+TGG | + | chr1.3:60739761-60739780 | None:intergenic | 35.0% | |
| AGACTTCAAGATGATTGAAG+GGG | - | chr1.3:60740960-60740979 | MS.gene20932:intron | 35.0% | |
| AGTTATGTATGCATCAATCG+TGG | - | chr1.3:60740405-60740424 | MS.gene20932:intron | 35.0% | |
| ATCATAATCACAATCCCACT+TGG | + | chr1.3:60741504-60741523 | None:intergenic | 35.0% | |
| CACATATTGAAAATTGGGGA+AGG | + | chr1.3:60741568-60741587 | None:intergenic | 35.0% | |
| CCCTCTTATTAGAATTCTTC+TGG | - | chr1.3:60741040-60741059 | MS.gene20932:intron | 35.0% | |
| CTTGACTGATTATGAAAGGT+TGG | - | chr1.3:60739149-60739168 | MS.gene20932:intron | 35.0% | |
| CTTGCAGGTATAATGCAATT+GGG | - | chr1.3:60739236-60739255 | MS.gene20932:intron | 35.0% | |
| GATGTTTAACGAACATGACT+TGG | + | chr1.3:60738896-60738915 | None:intergenic | 35.0% | |
| GTTATGTATGCATCAATCGT+GGG | - | chr1.3:60740406-60740425 | MS.gene20932:intron | 35.0% | |
| GTTGTGTCCAATACACATAA+TGG | + | chr1.3:60739539-60739558 | None:intergenic | 35.0% | |
| GTTTAGTTGCATGCTTGATT+TGG | - | chr1.3:60739596-60739615 | MS.gene20932:intron | 35.0% | |
| TAAAGTCCCAGAATCATCAT+CGG | + | chr1.3:60738977-60738996 | None:intergenic | 35.0% | |
| TAAGTTAGACACATTCACTC+AGG | - | chr1.3:60739436-60739455 | MS.gene20932:intron | 35.0% | |
| TATGTGTATTGGACACAACA+CGG | - | chr1.3:60739540-60739559 | MS.gene20932:intron | 35.0% | |
| TCTTGCAGGTATAATGCAAT+TGG | - | chr1.3:60739235-60739254 | MS.gene20932:intron | 35.0% | |
| TTAGAAACTAGGACCATGTT+TGG | + | chr1.3:60741378-60741397 | None:intergenic | 35.0% | |
| TTATCTACTCTAGTATGAGG+TGG | + | chr1.3:60740195-60740214 | None:intergenic | 35.0% | |
| TTGCAGGTATAATGCAATTG+GGG | - | chr1.3:60739237-60739256 | MS.gene20932:intron | 35.0% | |
| ! | AAATGGTCTATTTTGCAGGT+AGG | - | chr1.3:60741003-60741022 | MS.gene20932:intron | 35.0% |
| ! | AAATTTAGGGCAAGGTCATA+AGG | + | chr1.3:60739957-60739976 | None:intergenic | 35.0% |
| ! | ACTTGTTGAATACTCCTACA+TGG | + | chr1.3:60741636-60741655 | None:intergenic | 35.0% |
| ! | AGGAAAATGGTCTATTTTGC+AGG | - | chr1.3:60740999-60741018 | MS.gene20932:intron | 35.0% |
| ! | AGTTTGCATGGTTTTTATGC+TGG | + | chr1.3:60741068-60741087 | None:intergenic | 35.0% |
| ! | ATTCAGGTTATTGACCAAGT+GGG | - | chr1.3:60741487-60741506 | MS.gene20932:CDS | 35.0% |
| ! | ATTTTCACCATTTCCTATGC+TGG | - | chr1.3:60741259-60741278 | MS.gene20932:intron | 35.0% |
| ! | TATTCAGGTTATTGACCAAG+TGG | - | chr1.3:60741486-60741505 | MS.gene20932:CDS | 35.0% |
| !! | TGATGATTCTGGGACTTTAT+TGG | - | chr1.3:60738978-60738997 | MS.gene20932:intron | 35.0% |
| !! | TTTTTGGTCTGTAAACGAAG+TGG | + | chr1.3:60739479-60739498 | None:intergenic | 35.0% |
| !!! | GATTCTAGCTAGCGTTTTTT+TGG | - | chr1.3:60741417-60741436 | MS.gene20932:intron | 35.0% |
| !!! | GTTTTTTGTGACAGATAGAC+AGG | - | chr1.3:60740556-60740575 | MS.gene20932:intron | 35.0% |
| ACCAACTGATGTGTATTGCT+TGG | + | chr1.3:60740498-60740517 | None:intergenic | 40.0% | |
| ACGCTTCACTTGATTCCATT+TGG | - | chr1.3:60739121-60739140 | MS.gene20932:intron | 40.0% | |
| AGAGAAGAAAAGGGTGGAAA+TGG | + | chr1.3:60738845-60738864 | None:intergenic | 40.0% | |
| AGATGCACTCCATTTGTAGT+TGG | + | chr1.3:60741446-60741465 | None:intergenic | 40.0% | |
| AGTTGAAGATTCAGAGTCGT+TGG | - | chr1.3:60739017-60739036 | MS.gene20932:intron | 40.0% | |
| ATTCACGCAGAATTGAGTCT+AGG | - | chr1.3:60739088-60739107 | MS.gene20932:intron | 40.0% | |
| CATCATAGCATAGCCAAGTA+TGG | - | chr1.3:60740628-60740647 | MS.gene20932:intron | 40.0% | |
| CTGCAAAACCATCATTGTCT+AGG | + | chr1.3:60741685-60741704 | None:intergenic | 40.0% | |
| GCTAACATCCTAGACAATGA+TGG | - | chr1.3:60741674-60741693 | MS.gene20932:CDS | 40.0% | |
| GTCGTGTTAATTTCTCGAAC+CGG | + | chr1.3:60741738-60741757 | None:intergenic | 40.0% | |
| TCAGTACTCCCACAGTTTAA+AGG | + | chr1.3:60740457-60740476 | None:intergenic | 40.0% | |
| TCCAAGCAATACACATCAGT+TGG | - | chr1.3:60740494-60740513 | MS.gene20932:intron | 40.0% | |
| TGCAAGAGTCGAGCAAAATT+GGG | + | chr1.3:60739222-60739241 | None:intergenic | 40.0% | |
| TGGAAAGTCTGCGATTATTC+AGG | - | chr1.3:60741471-60741490 | MS.gene20932:CDS | 40.0% | |
| TTAGATGCAGCCACTGTATT+AGG | + | chr1.3:60739844-60739863 | None:intergenic | 40.0% | |
| TTCAGCTCTTCGAAGGAAAA+TGG | - | chr1.3:60740986-60741005 | MS.gene20932:intron | 40.0% | |
| TTGATGTTAAGCCGAAGATG+TGG | - | chr1.3:60741772-60741791 | MS.gene20932:CDS | 40.0% | |
| ! | AGCATTTAAAACCGGTCCAA+CGG | + | chr1.3:60740114-60740133 | None:intergenic | 40.0% |
| ! | ATGTGAAGCATCCTACTTCA+TGG | - | chr1.3:60740321-60740340 | MS.gene20932:intron | 40.0% |
| ! | CAGAGAAGTGCATAAAACTC+TGG | + | chr1.3:60741099-60741118 | None:intergenic | 40.0% |
| ! | CCTTTAGAAATTCAATGGCG+CGG | - | chr1.3:60740716-60740735 | MS.gene20932:intron | 40.0% |
| ! | GAGCAAAATTGGGACCTTTT+TGG | + | chr1.3:60739212-60739231 | None:intergenic | 40.0% |
| ! | GTGAGGGTGTGAAATGAAAA+GGG | + | chr1.3:60738873-60738892 | None:intergenic | 40.0% |
| ! | TGAGGGTGTGAAATGAAAAG+GGG | + | chr1.3:60738872-60738891 | None:intergenic | 40.0% |
| !! | ATCATCATCGGTGTCGTTTA+AGG | + | chr1.3:60738965-60738984 | None:intergenic | 40.0% |
| !! | CATGCTTGATTTGGCAAGTT+TGG | - | chr1.3:60739605-60739624 | MS.gene20932:intron | 40.0% |
| !! | GGTAACTTCTAGTTTGCTCA+GGG | + | chr1.3:60739789-60739808 | None:intergenic | 40.0% |
| !! | TGGTAACTTCTAGTTTGCTC+AGG | + | chr1.3:60739790-60739809 | None:intergenic | 40.0% |
| AAAAGGGTGGAAATGGAAGC+CGG | + | chr1.3:60738838-60738857 | None:intergenic | 45.0% | |
| AACGACACCGATGATGATTC+TGG | - | chr1.3:60738967-60738986 | MS.gene20932:CDS | 45.0% | |
| AATTTACTGAGGGCAAGACC+AGG | + | chr1.3:60739186-60739205 | None:intergenic | 45.0% | |
| ACAGATTGGAGAGCAGAACT+TGG | - | chr1.3:60740849-60740868 | MS.gene20932:intron | 45.0% | |
| ACGACACCGATGATGATTCT+GGG | - | chr1.3:60738968-60738987 | MS.gene20932:CDS | 45.0% | |
| ACTCTAGTATGAGGTGGTTG+TGG | + | chr1.3:60740189-60740208 | None:intergenic | 45.0% | |
| AGGAAAGTTTGCGTGGAAAC+TGG | + | chr1.3:60738793-60738812 | None:intergenic | 45.0% | |
| AGGGTGTGAAATGAAAAGGG+GGG | + | chr1.3:60738870-60738889 | None:intergenic | 45.0% | |
| ATCAAATACGGTCAGTCCGT+TGG | - | chr1.3:60740095-60740114 | MS.gene20932:intron | 45.0% | |
| ATGCAGCCACTGTATTAGGA+AGG | + | chr1.3:60739840-60739859 | None:intergenic | 45.0% | |
| ATGTATGCATCAATCGTGGG+TGG | - | chr1.3:60740409-60740428 | MS.gene20932:intron | 45.0% | |
| ATGTCACGCTTCATACCAGA+TGG | + | chr1.3:60740940-60740959 | None:intergenic | 45.0% | |
| CCGCGCCATTGAATTTCTAA+AGG | + | chr1.3:60740719-60740738 | None:intergenic | 45.0% | |
| CCTTGCAGCAAAACCATACT+TGG | + | chr1.3:60740644-60740663 | None:intergenic | 45.0% | |
| CTGCAAGAGTCGAGCAAAAT+TGG | + | chr1.3:60739223-60739242 | None:intergenic | 45.0% | |
| CTTCACCCCTTACGGATTTA+AGG | + | chr1.3:60741848-60741867 | None:intergenic | 45.0% | |
| GAATTGGAGACTCTTCCATC+TGG | - | chr1.3:60740922-60740941 | MS.gene20932:intron | 45.0% | |
| GAGAGCAGAACTTGGCATTT+GGG | - | chr1.3:60740857-60740876 | MS.gene20932:intron | 45.0% | |
| TAAACGAAGTGGCAAGCACA+AGG | + | chr1.3:60739468-60739487 | None:intergenic | 45.0% | |
| TAGGGACCTTCCTAATACAG+TGG | - | chr1.3:60739831-60739850 | MS.gene20932:intron | 45.0% | |
| TCACGAGGAACTGTGCTATA+AGG | - | chr1.3:60739566-60739585 | MS.gene20932:intron | 45.0% | |
| TCCAAGACCAGCATAGGAAA+TGG | + | chr1.3:60741269-60741288 | None:intergenic | 45.0% | |
| TTTCAGCGATGGAAGTTGTG+AGG | - | chr1.3:60741707-60741726 | MS.gene20932:CDS | 45.0% | |
| TTTCTGAGCTTCACCCCTTA+CGG | + | chr1.3:60741856-60741875 | None:intergenic | 45.0% | |
| ! | AACGAACATGACTTGGGTGA+GGG | + | chr1.3:60738889-60738908 | None:intergenic | 45.0% |
| ! | AATGACCTTGTTGGTGGATG+AGG | + | chr1.3:60739755-60739774 | None:intergenic | 45.0% |
| ! | ACCATTTCCTATGCTGGTCT+TGG | - | chr1.3:60741265-60741284 | MS.gene20932:intron | 45.0% |
| ! | AGAGTCGTTGGTTGAAGATG+GGG | - | chr1.3:60739029-60739048 | MS.gene20932:intron | 45.0% |
| ! | AGGTTGGCTGATTTCATTCC+TGG | - | chr1.3:60739165-60739184 | MS.gene20932:intron | 45.0% |
| ! | CAATTTTGCTCGACTCTTGC+AGG | - | chr1.3:60739221-60739240 | MS.gene20932:intron | 45.0% |
| ! | CAGAGTCGTTGGTTGAAGAT+GGG | - | chr1.3:60739028-60739047 | MS.gene20932:intron | 45.0% |
| ! | GAGGGTGTGAAATGAAAAGG+GGG | + | chr1.3:60738871-60738890 | None:intergenic | 45.0% |
| ! | GGTGAGGGTGTGAAATGAAA+AGG | + | chr1.3:60738874-60738893 | None:intergenic | 45.0% |
| ! | GTGTTTTCCAAGACCAGCAT+AGG | + | chr1.3:60741275-60741294 | None:intergenic | 45.0% |
| ! | GTTTTGCAGACTTTCAGCGA+TGG | - | chr1.3:60741696-60741715 | MS.gene20932:CDS | 45.0% |
| ! | TAACGAACATGACTTGGGTG+AGG | + | chr1.3:60738890-60738909 | None:intergenic | 45.0% |
| ! | TAAGGTGGTTGGGTTGTGTT+TGG | + | chr1.3:60738947-60738966 | None:intergenic | 45.0% |
| ! | TCAGAGTCGTTGGTTGAAGA+TGG | - | chr1.3:60739027-60739046 | MS.gene20932:intron | 45.0% |
| ! | TGGGACTTTATTGGTGACAG+AGG | - | chr1.3:60738987-60739006 | MS.gene20932:intron | 45.0% |
| ! | TTGGAAGCGCGATACAAAGA+AGG | + | chr1.3:60738928-60738947 | None:intergenic | 45.0% |
| !! | AACTGTGGGAGTACTGATCT+TGG | - | chr1.3:60740460-60740479 | MS.gene20932:intron | 45.0% |
| !! | ATCATCGGTGTCGTTTAAGG+TGG | + | chr1.3:60738962-60738981 | None:intergenic | 45.0% |
| !! | CCAAGTATGGTTTTGCTGCA+AGG | - | chr1.3:60740641-60740660 | MS.gene20932:intron | 45.0% |
| AAAGCATAGGCGTCCATGAG+TGG | - | chr1.3:60740283-60740302 | MS.gene20932:intron | 50.0% | |
| AAGGGGGGTGAGAGAAGAAA+AGG | + | chr1.3:60738855-60738874 | None:intergenic | 50.0% | |
| AGGGAGTAGGAAAGTTTGCG+TGG | + | chr1.3:60738800-60738819 | None:intergenic | 50.0% | |
| AGGGGGGTGAGAGAAGAAAA+GGG | + | chr1.3:60738854-60738873 | None:intergenic | 50.0% | |
| AGTGGTTGTGGGCGTCTATT+AGG | + | chr1.3:60740156-60740175 | None:intergenic | 50.0% | |
| CTAGTATGAGGTGGTTGTGG+TGG | + | chr1.3:60740186-60740205 | None:intergenic | 50.0% | |
| GGAGAGCAGAACTTGGCATT+TGG | - | chr1.3:60740856-60740875 | MS.gene20932:intron | 50.0% | |
| GGCGTCTATTAGGGTAATGC+AGG | + | chr1.3:60740146-60740165 | None:intergenic | 50.0% | |
| GTGATGGTTGAAGAGGGAGT+AGG | + | chr1.3:60738813-60738832 | None:intergenic | 50.0% | |
| GTGGTTGTGGGCGTCTATTA+GGG | + | chr1.3:60740155-60740174 | None:intergenic | 50.0% | |
| TAATAGACGCCCACAACCAC+TGG | - | chr1.3:60740155-60740174 | MS.gene20932:intron | 50.0% | |
| TATGCATCAATCGTGGGTGG+TGG | - | chr1.3:60740412-60740431 | MS.gene20932:intron | 50.0% | |
| TCTACCCTCTATCAGCCGAA+CGG | + | chr1.3:60741802-60741821 | None:intergenic | 50.0% | |
| TGGAAGTTGTGAGGACTCTC+CGG | - | chr1.3:60741716-60741735 | MS.gene20932:CDS | 50.0% | |
| TTCCTCCTCATCCACCAACA+AGG | - | chr1.3:60739747-60739766 | MS.gene20932:CDS | 50.0% | |
| ! | GGGGATTTTCAGCTCTTCGA+AGG | - | chr1.3:60740979-60740998 | MS.gene20932:intron | 50.0% |
| !! | CGGTGTCGTTTAAGGTGGTT+GGG | + | chr1.3:60738957-60738976 | None:intergenic | 50.0% |
| !! | TCGGTGTCGTTTAAGGTGGT+TGG | + | chr1.3:60738958-60738977 | None:intergenic | 50.0% |
| ATACGGTCAGTCCGTTGGAC+CGG | - | chr1.3:60740100-60740119 | MS.gene20932:intron | 55.0% | |
| CCCTCTTCAACCATCACCAC+CGG | - | chr1.3:60738816-60738835 | MS.gene20932:CDS | 55.0% | |
| CGAACGGGCAACCACATCTT+CGG | + | chr1.3:60741786-60741805 | None:intergenic | 55.0% | |
| CGAAGATGTGGTTGCCCGTT+CGG | - | chr1.3:60741784-60741803 | MS.gene20932:CDS | 55.0% | |
| CTACCCTCTATCAGCCGAAC+GGG | + | chr1.3:60741801-60741820 | None:intergenic | 55.0% | |
| GAAATGGAAGCCGGTGGTGA+TGG | + | chr1.3:60738829-60738848 | None:intergenic | 55.0% | |
| GGGGTGAGAGAAGAAAAGGG+TGG | + | chr1.3:60738851-60738870 | None:intergenic | 55.0% | |
| TTGCCCGTTCGGCTGATAGA+GGG | - | chr1.3:60741795-60741814 | MS.gene20932:CDS | 55.0% | |
| ! | CTGGTTTGCGCGAGTTTGCA+TGG | + | chr1.3:60741080-60741099 | None:intergenic | 55.0% |
| ! | GACCTTGTTGGTGGATGAGG+AGG | + | chr1.3:60739752-60739771 | None:intergenic | 55.0% |
| !! | CCGGTGGTGATGGTTGAAGA+GGG | + | chr1.3:60738819-60738838 | None:intergenic | 55.0% |
| AGGGTGGAAATGGAAGCCGG+TGG | + | chr1.3:60738835-60738854 | None:intergenic | 60.0% | |
| GACACAACACGGCTCTCACG+AGG | - | chr1.3:60739551-60739570 | MS.gene20932:intron | 60.0% | |
| GTGGCTACGCCAGTGGTTGT+GGG | + | chr1.3:60740167-60740186 | None:intergenic | 60.0% | |
| GTTGCCCGTTCGGCTGATAG+AGG | - | chr1.3:60741794-60741813 | MS.gene20932:CDS | 60.0% | |
| !! | GCCGGTGGTGATGGTTGAAG+AGG | + | chr1.3:60738820-60738839 | None:intergenic | 60.0% |
| GGTGGCTACGCCAGTGGTTG+TGG | + | chr1.3:60740168-60740187 | None:intergenic | 65.0% | |
| GGTTGTGGTGGCTACGCCAG+TGG | + | chr1.3:60740174-60740193 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 60738778 | 60741914 | 60738778 | ID=MS.gene20932 |
| chr1.3 | mRNA | 60738778 | 60741914 | 60738778 | ID=MS.gene20932.t1;Parent=MS.gene20932 |
| chr1.3 | exon | 60741450 | 60741914 | 60741450 | ID=MS.gene20932.t1.exon1;Parent=MS.gene20932.t1 |
| chr1.3 | CDS | 60741450 | 60741914 | 60741450 | ID=cds.MS.gene20932.t1;Parent=MS.gene20932.t1 |
| chr1.3 | exon | 60739672 | 60739839 | 60739672 | ID=MS.gene20932.t1.exon2;Parent=MS.gene20932.t1 |
| chr1.3 | CDS | 60739672 | 60739839 | 60739672 | ID=cds.MS.gene20932.t1;Parent=MS.gene20932.t1 |
| chr1.3 | exon | 60738778 | 60738987 | 60738778 | ID=MS.gene20932.t1.exon3;Parent=MS.gene20932.t1 |
| chr1.3 | CDS | 60738778 | 60738987 | 60738778 | ID=cds.MS.gene20932.t1;Parent=MS.gene20932.t1 |
| Gene Sequence |
| Protein sequence |
