Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21350.t1 | RHN81220.1 | 92.8 | 221 | 16 | 0 | 1 | 221 | 20 | 240 | 7.10E-117 | 430.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21350.t1 | Q03664 | 44.6 | 224 | 116 | 5 | 7 | 227 | 1 | 219 | 2.1e-48 | 194.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21350.t1 | G7I2Y3 | 92.8 | 221 | 16 | 0 | 1 | 221 | 1 | 221 | 5.1e-117 | 430.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049259 | MS.gene21350 | 0.803853 | 2.86E-49 | -1.69E-46 |
| MS.gene049281 | MS.gene21350 | 0.823643 | 1.24E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene21350 | -0.810018 | 1.42E-50 | -1.69E-46 |
| MS.gene049611 | MS.gene21350 | 0.827438 | 1.56E-54 | -1.69E-46 |
| MS.gene049634 | MS.gene21350 | 0.806737 | 7.11E-50 | -1.69E-46 |
| MS.gene050380 | MS.gene21350 | 0.826515 | 2.60E-54 | -1.69E-46 |
| MS.gene050381 | MS.gene21350 | 0.867748 | 1.09E-65 | -1.69E-46 |
| MS.gene050496 | MS.gene21350 | -0.808349 | 3.24E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene21350 | -0.801641 | 8.18E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene21350 | -0.801853 | 7.40E-49 | -1.69E-46 |
| MS.gene050883 | MS.gene21350 | 0.861674 | 8.69E-64 | -1.69E-46 |
| MS.gene051044 | MS.gene21350 | 0.809755 | 1.62E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene21350 | 0.832038 | 1.19E-55 | -1.69E-46 |
| MS.gene051127 | MS.gene21350 | 0.859991 | 2.82E-63 | -1.69E-46 |
| MS.gene051138 | MS.gene21350 | 0.81123 | 7.77E-51 | -1.69E-46 |
| MS.gene051364 | MS.gene21350 | 0.847985 | 8.18E-60 | -1.69E-46 |
| MS.gene051366 | MS.gene21350 | 0.83362 | 4.80E-56 | -1.69E-46 |
| MS.gene051367 | MS.gene21350 | 0.820966 | 5.19E-53 | -1.69E-46 |
| MS.gene051632 | MS.gene21350 | 0.804873 | 1.75E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene21350 | 0.823395 | 1.42E-53 | -1.69E-46 |
| MS.gene052211 | MS.gene21350 | 0.804831 | 1.79E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene21350 | -0.803262 | 3.79E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene21350 | -0.810424 | 1.16E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene21350 | 0.851266 | 9.93E-61 | -1.69E-46 |
| MS.gene053488 | MS.gene21350 | 0.82467 | 7.12E-54 | -1.69E-46 |
| MS.gene053549 | MS.gene21350 | 0.800841 | 1.19E-48 | -1.69E-46 |
| MS.gene053561 | MS.gene21350 | 0.841217 | 5.43E-58 | -1.69E-46 |
| MS.gene053826 | MS.gene21350 | 0.840422 | 8.78E-58 | -1.69E-46 |
| MS.gene054003 | MS.gene21350 | -0.803269 | 3.78E-49 | -1.69E-46 |
| MS.gene054054 | MS.gene21350 | 0.804403 | 2.20E-49 | -1.69E-46 |
| MS.gene054056 | MS.gene21350 | 0.813136 | 2.98E-51 | -1.69E-46 |
| MS.gene054706 | MS.gene21350 | 0.80785 | 4.13E-50 | -1.69E-46 |
| MS.gene054707 | MS.gene21350 | 0.806308 | 8.76E-50 | -1.69E-46 |
| MS.gene054708 | MS.gene21350 | 0.829329 | 5.47E-55 | -1.69E-46 |
| MS.gene055124 | MS.gene21350 | 0.859997 | 2.81E-63 | -1.69E-46 |
| MS.gene055139 | MS.gene21350 | 0.823725 | 1.19E-53 | -1.69E-46 |
| MS.gene055154 | MS.gene21350 | 0.880231 | 6.51E-70 | -1.69E-46 |
| MS.gene055202 | MS.gene21350 | 0.843241 | 1.58E-58 | -1.69E-46 |
| MS.gene055362 | MS.gene21350 | -0.81156 | 6.59E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene21350 | -0.809851 | 1.54E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene21350 | 0.804351 | 2.25E-49 | -1.69E-46 |
| MS.gene056224 | MS.gene21350 | 0.816417 | 5.59E-52 | -1.69E-46 |
| MS.gene056310 | MS.gene21350 | 0.841147 | 5.67E-58 | -1.69E-46 |
| MS.gene056311 | MS.gene21350 | 0.853601 | 2.14E-61 | -1.69E-46 |
| MS.gene056313 | MS.gene21350 | 0.835702 | 1.44E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene21350 | -0.821268 | 4.42E-53 | -1.69E-46 |
| MS.gene057014 | MS.gene21350 | 0.835808 | 1.35E-56 | -1.69E-46 |
| MS.gene057261 | MS.gene21350 | 0.801095 | 1.06E-48 | -1.69E-46 |
| MS.gene05726 | MS.gene21350 | 0.800655 | 1.30E-48 | -1.69E-46 |
| MS.gene057473 | MS.gene21350 | 0.807357 | 5.26E-50 | -1.69E-46 |
| MS.gene057499 | MS.gene21350 | 0.812347 | 4.44E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene21350 | 0.809075 | 2.26E-50 | -1.69E-46 |
| MS.gene057549 | MS.gene21350 | 0.817615 | 3.01E-52 | -1.69E-46 |
| MS.gene058068 | MS.gene21350 | 0.825867 | 3.71E-54 | -1.69E-46 |
| MS.gene058093 | MS.gene21350 | 0.842804 | 2.07E-58 | -1.69E-46 |
| MS.gene058099 | MS.gene21350 | 0.871409 | 6.99E-67 | -1.69E-46 |
| MS.gene058108 | MS.gene21350 | 0.829514 | 4.93E-55 | -1.69E-46 |
| MS.gene058109 | MS.gene21350 | 0.866571 | 2.59E-65 | -1.69E-46 |
| MS.gene058111 | MS.gene21350 | 0.851273 | 9.88E-61 | -1.69E-46 |
| MS.gene058157 | MS.gene21350 | -0.816009 | 6.90E-52 | -1.69E-46 |
| MS.gene058171 | MS.gene21350 | 0.871655 | 5.79E-67 | -1.69E-46 |
| MS.gene058173 | MS.gene21350 | 0.867497 | 1.31E-65 | -1.69E-46 |
| MS.gene058175 | MS.gene21350 | 0.871565 | 6.20E-67 | -1.69E-46 |
| MS.gene058179 | MS.gene21350 | 0.817935 | 2.55E-52 | -1.69E-46 |
| MS.gene058268 | MS.gene21350 | 0.821208 | 4.56E-53 | -1.69E-46 |
| MS.gene058269 | MS.gene21350 | 0.825804 | 3.84E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene21350 | -0.800957 | 1.13E-48 | -1.69E-46 |
| MS.gene058493 | MS.gene21350 | 0.856904 | 2.35E-62 | -1.69E-46 |
| MS.gene058494 | MS.gene21350 | 0.831295 | 1.81E-55 | -1.69E-46 |
| MS.gene058496 | MS.gene21350 | 0.826563 | 2.53E-54 | -1.69E-46 |
| MS.gene058603 | MS.gene21350 | 0.805253 | 1.46E-49 | -1.69E-46 |
| MS.gene058628 | MS.gene21350 | 0.814859 | 1.24E-51 | -1.69E-46 |
| MS.gene058630 | MS.gene21350 | 0.823101 | 1.66E-53 | -1.69E-46 |
| MS.gene058840 | MS.gene21350 | 0.817919 | 2.57E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene21350 | -0.806131 | 9.55E-50 | -1.69E-46 |
| MS.gene059037 | MS.gene21350 | 0.812768 | 3.59E-51 | -1.69E-46 |
| MS.gene059038 | MS.gene21350 | 0.801077 | 1.07E-48 | -1.69E-46 |
| MS.gene059045 | MS.gene21350 | 0.846326 | 2.33E-59 | -1.69E-46 |
| MS.gene059223 | MS.gene21350 | 0.816803 | 4.58E-52 | -1.69E-46 |
| MS.gene059691 | MS.gene21350 | 0.801263 | 9.78E-49 | -1.69E-46 |
| MS.gene059694 | MS.gene21350 | 0.816585 | 5.13E-52 | -1.69E-46 |
| MS.gene059697 | MS.gene21350 | 0.819658 | 1.03E-52 | -1.69E-46 |
| MS.gene059703 | MS.gene21350 | 0.805323 | 1.41E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene21350 | -0.809785 | 1.59E-50 | -1.69E-46 |
| MS.gene059916 | MS.gene21350 | 0.813021 | 3.16E-51 | -1.69E-46 |
| MS.gene060187 | MS.gene21350 | 0.817474 | 3.24E-52 | -1.69E-46 |
| MS.gene060205 | MS.gene21350 | 0.807123 | 5.89E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene21350 | -0.817206 | 3.72E-52 | -1.69E-46 |
| MS.gene060593 | MS.gene21350 | 0.803749 | 3.00E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene21350 | 0.83816 | 3.39E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene21350 | -0.81645 | 5.49E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21350.t1 | MTR_1g090070 | 92.760 | 221 | 16 | 0 | 1 | 221 | 1 | 221 | 5.85e-154 | 429 |
| MS.gene21350.t1 | MTR_1g090060 | 80.569 | 211 | 40 | 1 | 7 | 217 | 1 | 210 | 9.95e-129 | 365 |
| MS.gene21350.t1 | MTR_1g090100 | 77.477 | 222 | 47 | 2 | 10 | 231 | 3 | 221 | 1.49e-124 | 354 |
| MS.gene21350.t1 | MTR_1g090090 | 76.744 | 215 | 49 | 1 | 7 | 221 | 1 | 214 | 4.08e-121 | 345 |
| MS.gene21350.t1 | MTR_4g059730 | 63.380 | 213 | 77 | 1 | 9 | 221 | 4 | 215 | 1.83e-99 | 290 |
| MS.gene21350.t1 | MTR_1g090150 | 44.643 | 224 | 117 | 2 | 7 | 225 | 1 | 222 | 7.93e-63 | 197 |
| MS.gene21350.t1 | MTR_1g115195 | 43.721 | 215 | 119 | 2 | 7 | 220 | 1 | 214 | 1.89e-60 | 191 |
| MS.gene21350.t1 | MTR_3g099757 | 43.925 | 214 | 113 | 4 | 7 | 217 | 1 | 210 | 2.47e-56 | 181 |
| MS.gene21350.t1 | MTR_4g019780 | 43.333 | 210 | 114 | 3 | 9 | 217 | 8 | 213 | 1.50e-54 | 176 |
| MS.gene21350.t1 | MTR_6g080440 | 40.654 | 214 | 124 | 2 | 7 | 220 | 1 | 211 | 1.34e-53 | 174 |
| MS.gene21350.t1 | MTR_5g040430 | 40.654 | 214 | 120 | 4 | 8 | 216 | 6 | 217 | 1.72e-53 | 173 |
| MS.gene21350.t1 | MTR_4g019790 | 41.553 | 219 | 121 | 4 | 8 | 223 | 6 | 220 | 2.86e-53 | 173 |
| MS.gene21350.t1 | MTR_7g065740 | 40.625 | 224 | 119 | 4 | 9 | 225 | 7 | 223 | 7.08e-53 | 172 |
| MS.gene21350.t1 | MTR_7g065720 | 42.466 | 219 | 118 | 4 | 9 | 223 | 7 | 221 | 1.09e-52 | 171 |
| MS.gene21350.t1 | MTR_7g065660 | 40.639 | 219 | 123 | 4 | 10 | 225 | 8 | 222 | 3.83e-52 | 170 |
| MS.gene21350.t1 | MTR_7g065710 | 44.231 | 208 | 109 | 3 | 10 | 217 | 5 | 205 | 1.05e-50 | 166 |
| MS.gene21350.t1 | MTR_7g065630 | 41.627 | 209 | 115 | 2 | 9 | 217 | 25 | 226 | 2.39e-50 | 166 |
| MS.gene21350.t1 | MTR_7g065590 | 40.090 | 222 | 122 | 5 | 9 | 225 | 7 | 222 | 1.42e-49 | 163 |
| MS.gene21350.t1 | MTR_7g065230 | 42.105 | 209 | 113 | 3 | 9 | 217 | 7 | 207 | 2.15e-49 | 163 |
| MS.gene21350.t1 | MTR_8g087425 | 40.845 | 213 | 119 | 3 | 9 | 219 | 5 | 212 | 2.75e-48 | 160 |
| MS.gene21350.t1 | MTR_5g037380 | 39.565 | 230 | 120 | 5 | 9 | 226 | 5 | 227 | 4.05e-48 | 160 |
| MS.gene21350.t1 | MTR_7g065750 | 38.967 | 213 | 118 | 3 | 9 | 216 | 7 | 212 | 7.45e-48 | 159 |
| MS.gene21350.t1 | MTR_7g065600 | 38.991 | 218 | 128 | 2 | 10 | 225 | 8 | 222 | 1.54e-47 | 158 |
| MS.gene21350.t1 | MTR_8g087410 | 40.758 | 211 | 122 | 2 | 9 | 219 | 6 | 213 | 1.59e-46 | 155 |
| MS.gene21350.t1 | MTR_7g065290 | 39.713 | 209 | 123 | 1 | 9 | 217 | 7 | 212 | 4.34e-46 | 154 |
| MS.gene21350.t1 | MTR_8g061950 | 40.773 | 233 | 118 | 9 | 8 | 225 | 4 | 231 | 7.58e-46 | 154 |
| MS.gene21350.t1 | MTR_7g065270 | 40.191 | 209 | 122 | 1 | 9 | 217 | 7 | 212 | 3.77e-45 | 152 |
| MS.gene21350.t1 | MTR_2g070120 | 39.904 | 208 | 117 | 5 | 9 | 214 | 4 | 205 | 4.42e-45 | 152 |
| MS.gene21350.t1 | MTR_2g070200 | 41.791 | 201 | 110 | 6 | 9 | 207 | 4 | 199 | 4.83e-45 | 152 |
| MS.gene21350.t1 | MTR_2g070150 | 41.827 | 208 | 111 | 6 | 9 | 213 | 4 | 204 | 5.70e-44 | 148 |
| MS.gene21350.t1 | MTR_7g065700 | 43.689 | 206 | 107 | 3 | 9 | 212 | 7 | 205 | 6.59e-44 | 149 |
| MS.gene21350.t1 | MTR_7g065680 | 40.090 | 222 | 120 | 5 | 9 | 226 | 7 | 219 | 3.06e-43 | 147 |
| MS.gene21350.t1 | MTR_7g065260 | 41.206 | 199 | 112 | 3 | 9 | 206 | 14 | 208 | 1.02e-42 | 146 |
| MS.gene21350.t1 | MTR_7g065640 | 36.697 | 218 | 115 | 3 | 10 | 225 | 8 | 204 | 1.30e-42 | 145 |
| MS.gene21350.t1 | MTR_2g070130 | 38.835 | 206 | 120 | 5 | 9 | 213 | 4 | 204 | 1.43e-42 | 145 |
| MS.gene21350.t1 | MTR_7g065265 | 38.278 | 209 | 126 | 1 | 9 | 217 | 7 | 212 | 2.61e-42 | 145 |
| MS.gene21350.t1 | MTR_2g070180 | 39.801 | 201 | 111 | 6 | 16 | 213 | 11 | 204 | 1.53e-41 | 142 |
| MS.gene21350.t1 | MTR_2g070140 | 40.609 | 197 | 111 | 5 | 22 | 217 | 1 | 192 | 5.22e-40 | 138 |
| MS.gene21350.t1 | MTR_2g070210 | 36.449 | 214 | 124 | 6 | 9 | 217 | 4 | 210 | 6.05e-40 | 139 |
| MS.gene21350.t1 | MTR_2g070060 | 38.571 | 210 | 115 | 6 | 9 | 213 | 4 | 204 | 8.10e-38 | 133 |
| MS.gene21350.t1 | MTR_3g467430 | 37.379 | 206 | 119 | 6 | 16 | 218 | 16 | 214 | 2.78e-37 | 132 |
| MS.gene21350.t1 | MTR_8g056940 | 39.524 | 210 | 113 | 6 | 9 | 213 | 4 | 204 | 3.14e-37 | 131 |
| MS.gene21350.t1 | MTR_2g070110 | 37.209 | 215 | 120 | 5 | 9 | 218 | 4 | 208 | 1.11e-36 | 130 |
| MS.gene21350.t1 | MTR_3g467420 | 37.255 | 204 | 122 | 5 | 16 | 218 | 16 | 214 | 6.39e-36 | 128 |
| MS.gene21350.t1 | MTR_2g070070 | 36.408 | 206 | 125 | 4 | 9 | 213 | 4 | 204 | 1.89e-35 | 127 |
| MS.gene21350.t1 | MTR_4g124130 | 37.037 | 216 | 123 | 8 | 9 | 219 | 4 | 211 | 7.81e-35 | 125 |
| MS.gene21350.t1 | MTR_5g076900 | 34.742 | 213 | 129 | 6 | 16 | 225 | 13 | 218 | 9.96e-31 | 114 |
| MS.gene21350.t1 | MTR_0186s0030 | 45.324 | 139 | 66 | 3 | 9 | 142 | 4 | 137 | 1.64e-29 | 109 |
| MS.gene21350.t1 | MTR_2g072120 | 64.286 | 56 | 19 | 1 | 53 | 107 | 2 | 57 | 7.38e-20 | 82.0 |
| MS.gene21350.t1 | MTR_5g037390 | 40.506 | 79 | 44 | 1 | 35 | 110 | 13 | 91 | 2.03e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21350.t1 | AT3G09270 | 46.190 | 210 | 106 | 6 | 10 | 216 | 7 | 212 | 8.38e-52 | 169 |
| MS.gene21350.t1 | AT2G29470 | 40.284 | 211 | 119 | 5 | 10 | 217 | 8 | 214 | 2.36e-51 | 168 |
| MS.gene21350.t1 | AT2G29450 | 40.092 | 217 | 123 | 4 | 9 | 222 | 6 | 218 | 1.14e-49 | 164 |
| MS.gene21350.t1 | AT1G10370 | 40.826 | 218 | 121 | 4 | 8 | 219 | 4 | 219 | 1.56e-49 | 163 |
| MS.gene21350.t1 | AT2G29490 | 38.813 | 219 | 128 | 4 | 6 | 222 | 4 | 218 | 3.35e-48 | 160 |
| MS.gene21350.t1 | AT1G59670 | 41.850 | 227 | 116 | 7 | 9 | 221 | 6 | 230 | 2.49e-47 | 158 |
| MS.gene21350.t1 | AT2G29420 | 37.915 | 211 | 128 | 2 | 9 | 219 | 9 | 216 | 1.41e-46 | 156 |
| MS.gene21350.t1 | AT2G29460 | 38.278 | 209 | 125 | 4 | 6 | 213 | 4 | 209 | 1.24e-45 | 153 |
| MS.gene21350.t1 | AT1G59700 | 39.827 | 231 | 130 | 6 | 9 | 232 | 6 | 234 | 1.66e-45 | 153 |
| MS.gene21350.t1 | AT5G62480 | 36.916 | 214 | 121 | 5 | 12 | 215 | 11 | 220 | 1.79e-44 | 151 |
| MS.gene21350.t1 | AT1G78370 | 40.686 | 204 | 115 | 6 | 16 | 218 | 11 | 209 | 1.91e-44 | 150 |
| MS.gene21350.t1 | AT1G10360 | 40.000 | 220 | 122 | 4 | 9 | 221 | 5 | 221 | 5.04e-44 | 149 |
| MS.gene21350.t1 | AT2G29440 | 38.009 | 221 | 127 | 6 | 6 | 222 | 3 | 217 | 1.03e-42 | 145 |
| MS.gene21350.t1 | AT1G78340 | 38.498 | 213 | 121 | 6 | 9 | 218 | 4 | 209 | 4.95e-42 | 144 |
| MS.gene21350.t1 | AT1G27130 | 39.070 | 215 | 126 | 3 | 10 | 219 | 7 | 221 | 5.54e-42 | 144 |
| MS.gene21350.t1 | AT1G69930 | 38.140 | 215 | 126 | 4 | 10 | 219 | 13 | 225 | 9.56e-42 | 144 |
| MS.gene21350.t1 | AT2G29480 | 36.321 | 212 | 129 | 4 | 6 | 215 | 4 | 211 | 9.75e-42 | 143 |
| MS.gene21350.t1 | AT1G17180 | 37.963 | 216 | 124 | 6 | 9 | 221 | 4 | 212 | 2.01e-41 | 142 |
| MS.gene21350.t1 | AT1G17170 | 39.524 | 210 | 120 | 6 | 9 | 217 | 4 | 207 | 7.55e-41 | 141 |
| MS.gene21350.t1 | AT1G78320 | 41.799 | 189 | 100 | 6 | 9 | 194 | 4 | 185 | 1.63e-40 | 140 |
| MS.gene21350.t1 | AT1G74590 | 34.821 | 224 | 140 | 5 | 6 | 225 | 4 | 225 | 2.52e-39 | 137 |
| MS.gene21350.t1 | AT1G69920 | 36.818 | 220 | 124 | 6 | 10 | 219 | 35 | 249 | 5.67e-39 | 137 |
| MS.gene21350.t1 | AT1G17190 | 36.364 | 209 | 123 | 6 | 16 | 221 | 12 | 213 | 7.75e-38 | 133 |
| MS.gene21350.t1 | AT1G78380 | 37.037 | 216 | 126 | 6 | 9 | 221 | 4 | 212 | 2.52e-37 | 132 |
| MS.gene21350.t1 | AT1G27140 | 40.394 | 203 | 113 | 5 | 10 | 205 | 7 | 208 | 2.53e-37 | 132 |
| MS.gene21350.t1 | AT1G78360 | 35.681 | 213 | 130 | 5 | 8 | 218 | 3 | 210 | 3.50e-36 | 129 |
| MS.gene21350.t1 | AT1G53680 | 37.850 | 214 | 117 | 8 | 16 | 223 | 14 | 217 | 3.84e-36 | 129 |
| MS.gene21350.t1 | AT3G43800 | 37.255 | 204 | 118 | 6 | 9 | 207 | 5 | 203 | 1.60e-33 | 122 |
| MS.gene21350.t1 | AT5G62480 | 29.384 | 211 | 114 | 4 | 12 | 215 | 11 | 193 | 3.89e-28 | 107 |
| MS.gene21350.t1 | AT5G62480 | 29.384 | 211 | 115 | 4 | 12 | 215 | 11 | 194 | 4.48e-28 | 107 |
| MS.gene21350.t1 | AT1G78320 | 32.979 | 188 | 91 | 6 | 9 | 194 | 4 | 158 | 2.51e-21 | 89.4 |
Find 68 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTATAGCCCTTTCACTTTA+AGG | 0.144203 | 1.4:-71317487 | MS.gene21350:CDS |
| ACAGAGCTCAAGCAAGATTT+TGG | 0.157759 | 1.4:-71317250 | MS.gene21350:CDS |
| AGCTATGTCTACAATGTTAA+TGG | 0.243167 | 1.4:+71316218 | None:intergenic |
| AATGATCAGAATAAGTTCTA+TGG | 0.275936 | 1.4:-71316249 | MS.gene21350:CDS |
| AAAGTCCAGGGATAATTTAT+TGG | 0.296970 | 1.4:-71316304 | MS.gene21350:CDS |
| TATCCGTAGAATTTACTTAC+AGG | 0.307756 | 1.4:-71314884 | MS.gene21350:intron |
| GTATAGCCCTTTCACTTTAA+GGG | 0.310873 | 1.4:-71317486 | MS.gene21350:CDS |
| CGATGGAACGCCACAATTGC+CGG | 0.355415 | 1.4:+71316354 | None:intergenic |
| TTCCATCGAAGCATAATTAA+AGG | 0.356302 | 1.4:-71316339 | MS.gene21350:CDS |
| TTGAATACATTGATGAGATA+TGG | 0.380718 | 1.4:-71317307 | MS.gene21350:CDS |
| ACTGGAGTCTTCTTGTGTAT+TGG | 0.392101 | 1.4:+71317374 | None:intergenic |
| AATGGATACCGGTTTAAACT+TGG | 0.408902 | 1.4:-71315018 | MS.gene21350:CDS |
| CTTGCTTGAGCTCTGTCATA+TGG | 0.416587 | 1.4:+71317257 | None:intergenic |
| TAAAGGCAAGAAATGAATAA+AGG | 0.421234 | 1.4:-71314826 | None:intergenic |
| TAGAGGAAGATCACTTCAAT+AGG | 0.428981 | 1.4:-71317421 | MS.gene21350:CDS |
| CTTTCACTTTAAGGGTGGTA+TGG | 0.431843 | 1.4:-71317478 | MS.gene21350:CDS |
| AACATTGTAGACATAGCTCT+TGG | 0.450264 | 1.4:-71316213 | MS.gene21350:CDS |
| CTTGAAGTTTCCGGCAATTG+TGG | 0.451600 | 1.4:-71316364 | MS.gene21350:intron |
| CACCTTTAATTATGCTTCGA+TGG | 0.459821 | 1.4:+71316337 | None:intergenic |
| TTTGAGTAAACTTAGAGTAA+AGG | 0.463895 | 1.4:-71314843 | MS.gene21350:CDS |
| AGATAAAACTACATGGATCT+TGG | 0.472943 | 1.4:-71317508 | MS.gene21350:CDS |
| ATAATCATGGACTCACATAT+AGG | 0.473284 | 1.4:+71317332 | None:intergenic |
| ATGGATACCGGTTTAAACTT+GGG | 0.473335 | 1.4:-71315017 | MS.gene21350:CDS |
| TTTATGGTTTAATAATTTCA+AGG | 0.475281 | 1.4:-71316109 | MS.gene21350:CDS |
| GTGAAGAGCGGGAAAAGTCC+AGG | 0.476986 | 1.4:-71316317 | MS.gene21350:CDS |
| AATGTATTCAACAATAATCA+TGG | 0.478690 | 1.4:+71317319 | None:intergenic |
| TTGCATTAATATGCCCCATT+GGG | 0.483729 | 1.4:-71315103 | MS.gene21350:CDS |
| TGTTATCTTTGAGTTACTAA+AGG | 0.487162 | 1.4:+71315076 | None:intergenic |
| ATGATCAGAATAAGTTCTAT+GGG | 0.489286 | 1.4:-71316248 | MS.gene21350:CDS |
| CTTGCATTAATATGCCCCAT+TGG | 0.493900 | 1.4:-71315104 | MS.gene21350:CDS |
| TCTTCCTCTATACTATCATA+TGG | 0.496062 | 1.4:+71317434 | None:intergenic |
| CATAATTAAAGGTGAAGAGC+GGG | 0.504869 | 1.4:-71316328 | MS.gene21350:CDS |
| TTTACTTACAGGGAATATAG+AGG | 0.506483 | 1.4:-71314873 | MS.gene21350:CDS |
| TTACTAAAGGAAGTCCCAAT+GGG | 0.508661 | 1.4:+71315089 | None:intergenic |
| ATTAAACCATAAATGCAAGC+GGG | 0.510641 | 1.4:+71316119 | None:intergenic |
| CATGCACAAGCTAATTAAGA+TGG | 0.520586 | 1.4:-71317534 | MS.gene21350:CDS |
| TTTCCATCATGAACCAGCAC+TGG | 0.520744 | 1.4:+71317356 | None:intergenic |
| GGATTATATTGAAGAAGTTG+AGG | 0.529265 | 1.4:+71317395 | None:intergenic |
| TGGATACCGGTTTAAACTTG+GGG | 0.531280 | 1.4:-71315016 | MS.gene21350:CDS |
| CTCTGAGCAAGAGAAGTTTG+TGG | 0.536542 | 1.4:-71316061 | MS.gene21350:CDS |
| GCTCTGTCATATGGATCAGC+AGG | 0.539671 | 1.4:+71317266 | None:intergenic |
| CATACCACCCTTAAAGTGAA+AGG | 0.544844 | 1.4:+71317479 | None:intergenic |
| TCGCTCCAATAAATTATCCC+TGG | 0.548240 | 1.4:+71316299 | None:intergenic |
| ATCCGTAGAATTTACTTACA+GGG | 0.556754 | 1.4:-71314883 | MS.gene21350:intron |
| GGAGCGACTCGGAGTTGTTG+AGG | 0.560264 | 1.4:-71316283 | MS.gene21350:CDS |
| ACTCCAGTGCTGGTTCATGA+TGG | 0.570563 | 1.4:-71317359 | MS.gene21350:CDS |
| ATACCACCCTTAAAGTGAAA+GGG | 0.572861 | 1.4:+71317480 | None:intergenic |
| TATACCATATGATAGTATAG+AGG | 0.574275 | 1.4:-71317438 | MS.gene21350:CDS |
| GATAATTTATTGGAGCGACT+CGG | 0.578052 | 1.4:-71316294 | MS.gene21350:CDS |
| GGTATGGACTCTAAATCTGA+AGG | 0.579905 | 1.4:-71317462 | MS.gene21350:CDS |
| ACACAAGAAGACTCCAGTGC+TGG | 0.585534 | 1.4:-71317369 | MS.gene21350:CDS |
| TTAAACCATAAATGCAAGCG+GGG | 0.603941 | 1.4:+71316120 | None:intergenic |
| TAGCCCTTTCACTTTAAGGG+TGG | 0.610464 | 1.4:-71317483 | MS.gene21350:CDS |
| TATTAAACCATAAATGCAAG+CGG | 0.610901 | 1.4:+71316118 | None:intergenic |
| GTTACTAAAGGAAGTCCCAA+TGG | 0.611398 | 1.4:+71315088 | None:intergenic |
| GGTTAAATATGTTGATGACA+TGG | 0.614212 | 1.4:-71317228 | MS.gene21350:intron |
| GTATGGACTCTAAATCTGAA+GGG | 0.617910 | 1.4:-71317461 | MS.gene21350:CDS |
| ATGGCAGAGATAAAACTACA+TGG | 0.623570 | 1.4:-71317515 | MS.gene21350:CDS |
| CAATGGGGCATATTAATGCA+AGG | 0.628794 | 1.4:+71315105 | None:intergenic |
| CACAAACTTCTCTTGCTCAG+AGG | 0.635555 | 1.4:+71316062 | None:intergenic |
| TGAAGAGCGGGAAAAGTCCA+GGG | 0.655285 | 1.4:-71316316 | MS.gene21350:CDS |
| GGATACCGGTTTAAACTTGG+GGG | 0.660295 | 1.4:-71315015 | MS.gene21350:intron |
| GCATAATTAAAGGTGAAGAG+CGG | 0.664372 | 1.4:-71316329 | MS.gene21350:CDS |
| TAAACCATAAATGCAAGCGG+GGG | 0.664553 | 1.4:+71316121 | None:intergenic |
| GCAGGAAGCAATGAGTTGTG+TGG | 0.667285 | 1.4:+71317284 | None:intergenic |
| TGATCAGAATAAGTTCTATG+GGG | 0.669740 | 1.4:-71316247 | MS.gene21350:CDS |
| GATCAGAATAAGTTCTATGG+GGG | 0.670673 | 1.4:-71316246 | MS.gene21350:CDS |
| TACTAAAGGAAGTCCCAATG+GGG | 0.724431 | 1.4:+71315090 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTTTAAATTGAGTTAA+AGG | - | chr1.4:71315719-71315738 | MS.gene21350:intron | 15.0% |
| !! | ATTCAAACTAACAATAATAT+TGG | - | chr1.4:71315967-71315986 | MS.gene21350:intron | 15.0% |
| !! | ATTCAATAATTAAACGTAAA+AGG | + | chr1.4:71316644-71316663 | None:intergenic | 15.0% |
| !! | ATTTAAAAAAGGAAAATGAT+AGG | - | chr1.4:71316662-71316681 | MS.gene21350:intron | 15.0% |
| !! | TAACATTAAAAATGATGTTT+AGG | - | chr1.4:71317304-71317323 | MS.gene21350:CDS | 15.0% |
| !! | TATTAAGTATTAATTTATGG+TGG | + | chr1.4:71316443-71316462 | None:intergenic | 15.0% |
| !! | TTCAAACTAACAATAATATT+GGG | - | chr1.4:71315968-71315987 | MS.gene21350:intron | 15.0% |
| !! | TTTATGGTTTAATAATTTCA+AGG | - | chr1.4:71316253-71316272 | MS.gene21350:CDS | 15.0% |
| !! | TTTATGTTTAAAAACTTCAT+TGG | + | chr1.4:71315623-71315642 | None:intergenic | 15.0% |
| !!! | CAATTAAATTTGTTATTTGA+CGG | + | chr1.4:71316776-71316795 | None:intergenic | 15.0% |
| !!! | CTCAATTTAAAGTTTTAAAA+AGG | + | chr1.4:71315681-71315700 | None:intergenic | 15.0% |
| !! | AATGTATTCAACAATAATCA+TGG | + | chr1.4:71315046-71315065 | None:intergenic | 20.0% |
| !! | AGTAATGTTTATAAGATAGA+AGG | + | chr1.4:71315925-71315944 | None:intergenic | 20.0% |
| !! | ATGTAATTTATCTCTTTGAA+TGG | - | chr1.4:71315543-71315562 | MS.gene21350:intron | 20.0% |
| !! | CGTCAAATAACAAATTTAAT+TGG | - | chr1.4:71316774-71316793 | MS.gene21350:intron | 20.0% |
| !! | TATTTGTATCTTCATATCAT+GGG | - | chr1.4:71316509-71316528 | MS.gene21350:intron | 20.0% |
| !!! | ATCTTTTGTGAAATTTATTG+AGG | - | chr1.4:71316172-71316191 | MS.gene21350:CDS | 20.0% |
| !!! | CCAATAATTTTCAATAGTAA+GGG | + | chr1.4:71315882-71315901 | None:intergenic | 20.0% |
| !!! | TCCAATAATTTTCAATAGTA+AGG | + | chr1.4:71315883-71315902 | None:intergenic | 20.0% |
| ! | AATGATCAGAATAAGTTCTA+TGG | - | chr1.4:71316113-71316132 | MS.gene21350:CDS | 25.0% |
| ! | ACATAATTCCTTAACATAAG+TGG | + | chr1.4:71317005-71317024 | None:intergenic | 25.0% |
| ! | ATATATCATCATGTAGACAA+TGG | + | chr1.4:71315368-71315387 | None:intergenic | 25.0% |
| ! | ATGAAAAATTCTAATACGAC+TGG | - | chr1.4:71316404-71316423 | MS.gene21350:intron | 25.0% |
| ! | ATGAGATCATCTATAAATCT+GGG | - | chr1.4:71317179-71317198 | MS.gene21350:intron | 25.0% |
| ! | ATGATCAGAATAAGTTCTAT+GGG | - | chr1.4:71316114-71316133 | MS.gene21350:CDS | 25.0% |
| ! | CATAGATCAAAAATGAAGTT+TGG | - | chr1.4:71315590-71315609 | MS.gene21350:intron | 25.0% |
| ! | CCCTTACTATTGAAAATTAT+TGG | - | chr1.4:71315879-71315898 | MS.gene21350:intron | 25.0% |
| ! | GATAGATGACTAATTTGATT+TGG | + | chr1.4:71315299-71315318 | None:intergenic | 25.0% |
| ! | GCCTCTAATTGAAAAAATAA+TGG | - | chr1.4:71316334-71316353 | MS.gene21350:CDS | 25.0% |
| ! | GTATTTGTATCTTCATATCA+TGG | - | chr1.4:71316508-71316527 | MS.gene21350:intron | 25.0% |
| ! | TATACCATATGATAGTATAG+AGG | - | chr1.4:71314924-71314943 | MS.gene21350:intron | 25.0% |
| ! | TATGAGATCATCTATAAATC+TGG | - | chr1.4:71317178-71317197 | MS.gene21350:intron | 25.0% |
| ! | TATTAAACCATAAATGCAAG+CGG | + | chr1.4:71316247-71316266 | None:intergenic | 25.0% |
| ! | TGATTAAGTTAAATGACTTC+CGG | + | chr1.4:71315265-71315284 | None:intergenic | 25.0% |
| ! | TTGAATACATTGATGAGATA+TGG | - | chr1.4:71315055-71315074 | MS.gene21350:CDS | 25.0% |
| ! | TTTGAGTAAACTTAGAGTAA+AGG | - | chr1.4:71317519-71317538 | MS.gene21350:CDS | 25.0% |
| !! | ATAATTTTCAATAGTAAGGG+AGG | + | chr1.4:71315879-71315898 | None:intergenic | 25.0% |
| !! | TGTTATCTTTGAGTTACTAA+AGG | + | chr1.4:71317289-71317308 | None:intergenic | 25.0% |
| !! | TTAGTTTGAATCTAGATAGA+AGG | + | chr1.4:71315958-71315977 | None:intergenic | 25.0% |
| !!! | ATGGTTTTAGATTAATTCCA+TGG | + | chr1.4:71317434-71317453 | None:intergenic | 25.0% |
| !!! | GCCATTATTTTTTCAATTAG+AGG | + | chr1.4:71316338-71316357 | None:intergenic | 25.0% |
| !!! | TTGATTGGTCTTGAATATAT+AGG | + | chr1.4:71315763-71315782 | None:intergenic | 25.0% |
| AAAGTCCAGGGATAATTTAT+TGG | - | chr1.4:71316058-71316077 | MS.gene21350:CDS | 30.0% | |
| AAAGTTAAGTCACTAGTGTA+AGG | + | chr1.4:71315330-71315349 | None:intergenic | 30.0% | |
| AAATGCATCCACTTATGTTA+AGG | - | chr1.4:71316994-71317013 | MS.gene21350:intron | 30.0% | |
| AATCTACTTGACCAAGTTAT+TGG | - | chr1.4:71317147-71317166 | MS.gene21350:intron | 30.0% | |
| AGATAAAACTACATGGATCT+TGG | - | chr1.4:71314854-71314873 | MS.gene21350:CDS | 30.0% | |
| AGCTATGTCTACAATGTTAA+TGG | + | chr1.4:71316147-71316166 | None:intergenic | 30.0% | |
| ATAATCATGGACTCACATAT+AGG | + | chr1.4:71315033-71315052 | None:intergenic | 30.0% | |
| ATCCGTAGAATTTACTTACA+GGG | - | chr1.4:71317479-71317498 | MS.gene21350:CDS | 30.0% | |
| ATCTACTTGACCAAGTTATT+GGG | - | chr1.4:71317148-71317167 | MS.gene21350:intron | 30.0% | |
| ATTAAACCATAAATGCAAGC+GGG | + | chr1.4:71316246-71316265 | None:intergenic | 30.0% | |
| ATTGTTCATCCTTTATAGTC+AGG | - | chr1.4:71317383-71317402 | MS.gene21350:CDS | 30.0% | |
| GAACATGTATCATGATAGAA+AGG | + | chr1.4:71315218-71315237 | None:intergenic | 30.0% | |
| GATTAAGTTAAATGACTTCC+GGG | + | chr1.4:71315264-71315283 | None:intergenic | 30.0% | |
| GGATTATATTGAAGAAGTTG+AGG | + | chr1.4:71314970-71314989 | None:intergenic | 30.0% | |
| GTAAGTAAATTCTACGGATA+AGG | + | chr1.4:71317478-71317497 | None:intergenic | 30.0% | |
| TATCCGTAGAATTTACTTAC+AGG | - | chr1.4:71317478-71317497 | MS.gene21350:CDS | 30.0% | |
| TCTTCCTCTATACTATCATA+TGG | + | chr1.4:71314931-71314950 | None:intergenic | 30.0% | |
| TGAGATCATCTATAAATCTG+GGG | - | chr1.4:71317180-71317199 | MS.gene21350:intron | 30.0% | |
| TGATAACAAGATCACAATCT+TGG | - | chr1.4:71315433-71315452 | MS.gene21350:intron | 30.0% | |
| TGATCAGAATAAGTTCTATG+GGG | - | chr1.4:71316115-71316134 | MS.gene21350:CDS | 30.0% | |
| TTAGAAGTCTTACTCTTGAT+TGG | + | chr1.4:71315778-71315797 | None:intergenic | 30.0% | |
| TTCCATCGAAGCATAATTAA+AGG | - | chr1.4:71316023-71316042 | MS.gene21350:intron | 30.0% | |
| TTCCCTGTAAGTAAATTCTA+CGG | + | chr1.4:71317484-71317503 | None:intergenic | 30.0% | |
| TTTACTTACAGGGAATATAG+AGG | - | chr1.4:71317489-71317508 | MS.gene21350:CDS | 30.0% | |
| ! | AGTTTTGCCTAAAAAATGAG+TGG | + | chr1.4:71315240-71315259 | None:intergenic | 30.0% |
| ! | ATCAACTAGAGTCCAATTTT+AGG | + | chr1.4:71315417-71315436 | None:intergenic | 30.0% |
| ! | TCAACTAGAGTCCAATTTTA+GGG | + | chr1.4:71315416-71315435 | None:intergenic | 30.0% |
| ! | TCACATTGGTAGTTAAGAAA+TGG | - | chr1.4:71317029-71317048 | MS.gene21350:intron | 30.0% |
| ! | TGTTATTTGACGGAAATCAA+GGG | + | chr1.4:71316766-71316785 | None:intergenic | 30.0% |
| !! | GGTTAAATATGTTGATGACA+TGG | - | chr1.4:71315134-71315153 | MS.gene21350:intron | 30.0% |
| !! | TTGTTATTTGACGGAAATCA+AGG | + | chr1.4:71316767-71316786 | None:intergenic | 30.0% |
| !!! | ACATGTTCCACTCATTTTTT+AGG | - | chr1.4:71315230-71315249 | MS.gene21350:intron | 30.0% |
| !!! | ATTTTTTAGGCAAAACTACC+CGG | - | chr1.4:71315243-71315262 | MS.gene21350:intron | 30.0% |
| AAATGGAGGTCTTACCTATT+AGG | - | chr1.4:71317046-71317065 | MS.gene21350:intron | 35.0% | |
| AACATTGTAGACATAGCTCT+TGG | - | chr1.4:71316149-71316168 | MS.gene21350:CDS | 35.0% | |
| AGAAGTTTGTGGCTTATGTA+AGG | - | chr1.4:71316312-71316331 | MS.gene21350:CDS | 35.0% | |
| ATACCACCCTTAAAGTGAAA+GGG | + | chr1.4:71314885-71314904 | None:intergenic | 35.0% | |
| ATGGCAGAGATAAAACTACA+TGG | - | chr1.4:71314847-71314866 | MS.gene21350:CDS | 35.0% | |
| ATGTATCATGATAGAAAGGC+TGG | + | chr1.4:71315214-71315233 | None:intergenic | 35.0% | |
| ATTCCGAATGAACAACAGTT+TGG | - | chr1.4:71316885-71316904 | MS.gene21350:intron | 35.0% | |
| CACCTTTAATTATGCTTCGA+TGG | + | chr1.4:71316028-71316047 | None:intergenic | 35.0% | |
| CATAATTAAAGGTGAAGAGC+GGG | - | chr1.4:71316034-71316053 | MS.gene21350:intron | 35.0% | |
| CTTTAAGCACACCAACAAAA+GGG | - | chr1.4:71315806-71315825 | MS.gene21350:intron | 35.0% | |
| GATAATTTATTGGAGCGACT+CGG | - | chr1.4:71316068-71316087 | MS.gene21350:CDS | 35.0% | |
| GATCAGAATAAGTTCTATGG+GGG | - | chr1.4:71316116-71316135 | MS.gene21350:CDS | 35.0% | |
| GATCCAAACTGTTGTTCATT+CGG | + | chr1.4:71316891-71316910 | None:intergenic | 35.0% | |
| GCATAATTAAAGGTGAAGAG+CGG | - | chr1.4:71316033-71316052 | MS.gene21350:intron | 35.0% | |
| GGAATTATGTGTCATCACAT+TGG | - | chr1.4:71317015-71317034 | MS.gene21350:intron | 35.0% | |
| GTATAGCCCTTTCACTTTAA+GGG | - | chr1.4:71314876-71314895 | MS.gene21350:CDS | 35.0% | |
| GTATGGACTCTAAATCTGAA+GGG | - | chr1.4:71314901-71314920 | MS.gene21350:intron | 35.0% | |
| GTCAAGTAGATTTATTGCTC+CGG | + | chr1.4:71317139-71317158 | None:intergenic | 35.0% | |
| TAGAGGAAGATCACTTCAAT+AGG | - | chr1.4:71314941-71314960 | MS.gene21350:intron | 35.0% | |
| TCTACTTGACCAAGTTATTG+GGG | - | chr1.4:71317149-71317168 | MS.gene21350:intron | 35.0% | |
| TGTGACACAAAAATGGATAC+CGG | - | chr1.4:71317333-71317352 | MS.gene21350:CDS | 35.0% | |
| TTAAACCATAAATGCAAGCG+GGG | + | chr1.4:71316245-71316264 | None:intergenic | 35.0% | |
| TTACTAAAGGAAGTCCCAAT+GGG | + | chr1.4:71317276-71317295 | None:intergenic | 35.0% | |
| TTCACACTCAACCCTAAAAT+TGG | - | chr1.4:71315402-71315421 | MS.gene21350:intron | 35.0% | |
| TTGCATTAATATGCCCCATT+GGG | - | chr1.4:71317259-71317278 | MS.gene21350:CDS | 35.0% | |
| ! | CATTGGTAGTTAAGAAATGG+AGG | - | chr1.4:71317032-71317051 | MS.gene21350:intron | 35.0% |
| ! | GAGGTAATGGTGTGTAATTA+AGG | + | chr1.4:71316744-71316763 | None:intergenic | 35.0% |
| ! | TGGATGCATTTAGCATCTTT+TGG | + | chr1.4:71316985-71317004 | None:intergenic | 35.0% |
| !! | AATGGATACCGGTTTAAACT+TGG | - | chr1.4:71317344-71317363 | MS.gene21350:CDS | 35.0% |
| !! | ATAAGAGTACCCCAATAACT+TGG | + | chr1.4:71317161-71317180 | None:intergenic | 35.0% |
| !! | ATCCATTTTTGTGTCACAGT+TGG | + | chr1.4:71317331-71317350 | None:intergenic | 35.0% |
| !! | ATGGATACCGGTTTAAACTT+GGG | - | chr1.4:71317345-71317364 | MS.gene21350:CDS | 35.0% |
| !!! | CTCAGAGGTATTTTCTTTGA+TGG | + | chr1.4:71316288-71316307 | None:intergenic | 35.0% |
| !!! | TGTTTTTTTCCATGTCAAGC+TGG | + | chr1.4:71315649-71315668 | None:intergenic | 35.0% |
| ACAGTTGGGTTACAAAAGGA+TGG | + | chr1.4:71317453-71317472 | None:intergenic | 40.0% | |
| ACTGGAGTCTTCTTGTGTAT+TGG | + | chr1.4:71314991-71315010 | None:intergenic | 40.0% | |
| AGATTTATTGCTCCGGAGTT+TGG | + | chr1.4:71317132-71317151 | None:intergenic | 40.0% | |
| CAATGGGGCATATTAATGCA+AGG | + | chr1.4:71317260-71317279 | None:intergenic | 40.0% | |
| CATAAATGACCAGCTTGACA+TGG | - | chr1.4:71315637-71315656 | MS.gene21350:intron | 40.0% | |
| CATACCACCCTTAAAGTGAA+AGG | + | chr1.4:71314886-71314905 | None:intergenic | 40.0% | |
| CCACTTGAACCTGACTATAA+AGG | + | chr1.4:71317395-71317414 | None:intergenic | 40.0% | |
| CCTTTATAGTCAGGTTCAAG+TGG | - | chr1.4:71317392-71317411 | MS.gene21350:CDS | 40.0% | |
| CTACGGATAAGGATACAGTT+GGG | + | chr1.4:71317467-71317486 | None:intergenic | 40.0% | |
| CTTGCATTAATATGCCCCAT+TGG | - | chr1.4:71317258-71317277 | MS.gene21350:CDS | 40.0% | |
| GGATACAGTTGGGTTACAAA+AGG | + | chr1.4:71317457-71317476 | None:intergenic | 40.0% | |
| GGATCAATGCTTGAAGTTTC+CGG | - | chr1.4:71315989-71316008 | MS.gene21350:intron | 40.0% | |
| GGTATAGCCCTTTCACTTTA+AGG | - | chr1.4:71314875-71314894 | MS.gene21350:CDS | 40.0% | |
| GGTATGGACTCTAAATCTGA+AGG | - | chr1.4:71314900-71314919 | MS.gene21350:intron | 40.0% | |
| GTCCAACTGTGACACAAAAA+TGG | - | chr1.4:71317326-71317345 | MS.gene21350:CDS | 40.0% | |
| GTTACTAAAGGAAGTCCCAA+TGG | + | chr1.4:71317277-71317296 | None:intergenic | 40.0% | |
| TAAACCATAAATGCAAGCGG+GGG | + | chr1.4:71316244-71316263 | None:intergenic | 40.0% | |
| TACTAAAGGAAGTCCCAATG+GGG | + | chr1.4:71317275-71317294 | None:intergenic | 40.0% | |
| TATTTGACGGAAATCAAGGG+AGG | + | chr1.4:71316763-71316782 | None:intergenic | 40.0% | |
| TCGCTCCAATAAATTATCCC+TGG | + | chr1.4:71316066-71316085 | None:intergenic | 40.0% | |
| TCTACGGATAAGGATACAGT+TGG | + | chr1.4:71317468-71317487 | None:intergenic | 40.0% | |
| ! | ACAGAGCTCAAGCAAGATTT+TGG | - | chr1.4:71315112-71315131 | MS.gene21350:CDS | 40.0% |
| ! | CAGAGCTCAAGCAAGATTTT+GGG | - | chr1.4:71315113-71315132 | MS.gene21350:CDS | 40.0% |
| ! | CTTTCACTTTAAGGGTGGTA+TGG | - | chr1.4:71314884-71314903 | MS.gene21350:intron | 40.0% |
| ! | GCTTTAAGCACACCAACAAA+AGG | - | chr1.4:71315805-71315824 | MS.gene21350:intron | 40.0% |
| ! | TCACGACTTAGAAGTCTTGT+CGG | - | chr1.4:71316909-71316928 | MS.gene21350:intron | 40.0% |
| ! | TGCATATGAGACCCTTTTGT+TGG | + | chr1.4:71315820-71315839 | None:intergenic | 40.0% |
| !! | GAGGTATTTTCTTTGATGGC+TGG | + | chr1.4:71316284-71316303 | None:intergenic | 40.0% |
| !! | TGGATACCGGTTTAAACTTG+GGG | - | chr1.4:71317346-71317365 | MS.gene21350:CDS | 40.0% |
| ACGGAAATCAAGGGAGGTAA+TGG | + | chr1.4:71316757-71316776 | None:intergenic | 45.0% | |
| ACTCACCCCCAAGTTTAAAC+CGG | + | chr1.4:71317355-71317374 | None:intergenic | 45.0% | |
| ATGAACACGAGACAAGGCAT+CGG | + | chr1.4:71317223-71317242 | None:intergenic | 45.0% | |
| CACAAACTTCTCTTGCTCAG+AGG | + | chr1.4:71316303-71316322 | None:intergenic | 45.0% | |
| CTCCGGAGTTTGGATTACTT+GGG | + | chr1.4:71317122-71317141 | None:intergenic | 45.0% | |
| CTCTGAGCAAGAGAAGTTTG+TGG | - | chr1.4:71316301-71316320 | MS.gene21350:CDS | 45.0% | |
| CTGTTCATGAACACGAGACA+AGG | + | chr1.4:71317229-71317248 | None:intergenic | 45.0% | |
| CTTGAAGTTTCCGGCAATTG+TGG | - | chr1.4:71315998-71316017 | MS.gene21350:intron | 45.0% | |
| CTTGCTTGAGCTCTGTCATA+TGG | + | chr1.4:71315108-71315127 | None:intergenic | 45.0% | |
| CTTGTCTCGTGTTCATGAAC+AGG | - | chr1.4:71317227-71317246 | MS.gene21350:intron | 45.0% | |
| GACCCAAGTAATCCAAACTC+CGG | - | chr1.4:71317117-71317136 | MS.gene21350:intron | 45.0% | |
| GCTGAATGACTATGTCTCCA+TGG | - | chr1.4:71317414-71317433 | MS.gene21350:CDS | 45.0% | |
| GGATTACTTGGGTCATGAGT+TGG | + | chr1.4:71317111-71317130 | None:intergenic | 45.0% | |
| TGTTGGTGTGCTTAAAGCGA+AGG | + | chr1.4:71315803-71315822 | None:intergenic | 45.0% | |
| TTTAAACTTGGGGGTGAGTC+TGG | - | chr1.4:71317356-71317375 | MS.gene21350:CDS | 45.0% | |
| TTTCCATCATGAACCAGCAC+TGG | + | chr1.4:71315009-71315028 | None:intergenic | 45.0% | |
| ! | GCAAACTGTGTTGATCCGTA+TGG | + | chr1.4:71317087-71317106 | None:intergenic | 45.0% |
| ! | TAGCCCTTTCACTTTAAGGG+TGG | - | chr1.4:71314879-71314898 | MS.gene21350:intron | 45.0% |
| !! | AGTCTTGTCGGTTCGTTCTT+CGG | - | chr1.4:71316921-71316940 | MS.gene21350:intron | 45.0% |
| !! | GGATACCGGTTTAAACTTGG+GGG | - | chr1.4:71317347-71317366 | MS.gene21350:CDS | 45.0% |
| !! | TTAATTATTGAATTTAAAAA+AGG | - | chr1.4:71316651-71316670 | MS.gene21350:intron | 5.0% |
| !!! | TTTTATTAAGTATTAATTTA+TGG | + | chr1.4:71316446-71316465 | None:intergenic | 5.0% |
| ACACAAGAAGACTCCAGTGC+TGG | - | chr1.4:71314993-71315012 | MS.gene21350:intron | 50.0% | |
| CCGCAAACTCGTGATCCATA+CGG | - | chr1.4:71317069-71317088 | MS.gene21350:intron | 50.0% | |
| CCGTATGGATCACGAGTTTG+CGG | + | chr1.4:71317072-71317091 | None:intergenic | 50.0% | |
| GATTCCCCCGCTTGCATTTA+TGG | - | chr1.4:71316237-71316256 | MS.gene21350:CDS | 50.0% | |
| GCAGGAAGCAATGAGTTGTG+TGG | + | chr1.4:71315081-71315100 | None:intergenic | 50.0% | |
| GCTCCGGAGTTTGGATTACT+TGG | + | chr1.4:71317123-71317142 | None:intergenic | 50.0% | |
| GCTCTGTCATATGGATCAGC+AGG | + | chr1.4:71315099-71315118 | None:intergenic | 50.0% | |
| TCACGAGTTTGCGGCCTAAT+AGG | + | chr1.4:71317063-71317082 | None:intergenic | 50.0% | |
| TGAAGAGCGGGAAAAGTCCA+GGG | - | chr1.4:71316046-71316065 | MS.gene21350:intron | 50.0% | |
| !! | ACTCCAGTGCTGGTTCATGA+TGG | - | chr1.4:71315003-71315022 | MS.gene21350:intron | 50.0% |
| CGATGGAACGCCACAATTGC+CGG | + | chr1.4:71316011-71316030 | None:intergenic | 55.0% | |
| GAGACGACATACGTCGTCGT+TGG | + | chr1.4:71316480-71316499 | None:intergenic | 55.0% | |
| GTGAAGAGCGGGAAAAGTCC+AGG | - | chr1.4:71316045-71316064 | MS.gene21350:intron | 55.0% | |
| ! | GGAGCGACTCGGAGTTGTTG+AGG | - | chr1.4:71316079-71316098 | MS.gene21350:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 71314829 | 71317555 | 71314829 | ID=MS.gene21350 |
| chr1.4 | mRNA | 71314829 | 71317555 | 71314829 | ID=MS.gene21350.t1;Parent=MS.gene21350 |
| chr1.4 | exon | 71317229 | 71317555 | 71317229 | ID=MS.gene21350.t1.exon1;Parent=MS.gene21350.t1 |
| chr1.4 | CDS | 71317229 | 71317555 | 71317229 | ID=cds.MS.gene21350.t1;Parent=MS.gene21350.t1 |
| chr1.4 | exon | 71316056 | 71316379 | 71316056 | ID=MS.gene21350.t1.exon2;Parent=MS.gene21350.t1 |
| chr1.4 | CDS | 71316056 | 71316379 | 71316056 | ID=cds.MS.gene21350.t1;Parent=MS.gene21350.t1 |
| chr1.4 | exon | 71315016 | 71315135 | 71315016 | ID=MS.gene21350.t1.exon3;Parent=MS.gene21350.t1 |
| chr1.4 | CDS | 71315016 | 71315135 | 71315016 | ID=cds.MS.gene21350.t1;Parent=MS.gene21350.t1 |
| chr1.4 | exon | 71314829 | 71314897 | 71314829 | ID=MS.gene21350.t1.exon4;Parent=MS.gene21350.t1 |
| chr1.4 | CDS | 71314829 | 71314897 | 71314829 | ID=cds.MS.gene21350.t1;Parent=MS.gene21350.t1 |
| Gene Sequence |
| Protein sequence |
