AlfalfaGEDB | MS.gene24570

M. sativa cultivar XinJiangDaYe / MS.gene24570

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0008150 GO:0008270 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043167 GO:0043169 GO:0043565 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00320.30

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene24570.t1	XP_003588994.1	94.5	201	11	0	2	202	105	305	1.20E-65	259.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene24570.t1	Q9SZI6	72.5	51	12	1	73	121	186	236	2.0e-13	77.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene24570.t1	G7I9Y4	94.5	201	11	0	2	202	105	305	8.6e-66	259.6

TFs/TRs:

Gene ID	Type	Classification
MS.gene24570.t1	TF	C2C2-GATA

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene24570	0.81795	2.53E-52	-1.69E-46
MS.gene049171	MS.gene24570	0.816001	6.93E-52	-1.69E-46
MS.gene049222	MS.gene24570	0.818232	2.18E-52	-1.69E-46
MS.gene049285	MS.gene24570	0.821081	4.88E-53	-1.69E-46
MS.gene049609	MS.gene24570	0.810705	1.01E-50	-1.69E-46
MS.gene049805	MS.gene24570	0.826884	2.12E-54	-1.69E-46
MS.gene050083	MS.gene24570	-0.802451	5.57E-49	-1.69E-46
MS.gene050444	MS.gene24570	0.803322	3.68E-49	-1.69E-46
MS.gene050520	MS.gene24570	0.800805	1.21E-48	-1.69E-46
MS.gene050538	MS.gene24570	0.805914	1.06E-49	-1.69E-46
MS.gene050612	MS.gene24570	0.808594	2.87E-50	-1.69E-46
MS.gene050747	MS.gene24570	0.819932	8.96E-53	-1.69E-46
MS.gene050772	MS.gene24570	0.838005	3.72E-57	-1.69E-46
MS.gene050809	MS.gene24570	-0.818432	1.97E-52	-1.69E-46
MS.gene05080	MS.gene24570	0.826496	2.63E-54	-1.69E-46
MS.gene050812	MS.gene24570	0.80098	1.12E-48	-1.69E-46
MS.gene05081	MS.gene24570	0.827811	1.27E-54	-1.69E-46
MS.gene050868	MS.gene24570	0.82978	4.25E-55	-1.69E-46
MS.gene050871	MS.gene24570	0.827365	1.63E-54	-1.69E-46
MS.gene050950	MS.gene24570	0.816962	4.22E-52	-1.69E-46
MS.gene05105	MS.gene24570	0.81474	1.32E-51	-1.69E-46
MS.gene051228	MS.gene24570	0.807286	5.44E-50	-1.69E-46
MS.gene051666	MS.gene24570	0.848472	6.00E-60	-1.69E-46
MS.gene051694	MS.gene24570	0.801491	8.78E-49	-1.69E-46
MS.gene051838	MS.gene24570	0.811759	5.96E-51	-1.69E-46
MS.gene051858	MS.gene24570	0.837501	5.01E-57	-1.69E-46
MS.gene051874	MS.gene24570	0.840279	9.57E-58	-1.69E-46
MS.gene052322	MS.gene24570	0.809436	1.89E-50	-1.69E-46
MS.gene052379	MS.gene24570	0.819321	1.24E-52	-1.69E-46
MS.gene052421	MS.gene24570	0.809671	1.69E-50	-1.69E-46
MS.gene052484	MS.gene24570	0.800711	1.27E-48	-1.69E-46
MS.gene052615	MS.gene24570	0.823229	1.55E-53	-1.69E-46
MS.gene052870	MS.gene24570	0.872199	3.82E-67	-1.69E-46
MS.gene052872	MS.gene24570	0.869925	2.15E-66	-1.69E-46
MS.gene053009	MS.gene24570	0.826898	2.11E-54	-1.69E-46
MS.gene053103	MS.gene24570	0.817918	2.57E-52	-1.69E-46
MS.gene053104	MS.gene24570	0.814531	1.47E-51	-1.69E-46
MS.gene053322	MS.gene24570	0.805854	1.09E-49	-1.69E-46
MS.gene053479	MS.gene24570	0.815239	1.02E-51	-1.69E-46
MS.gene053574	MS.gene24570	0.800241	1.58E-48	-1.69E-46
MS.gene053632	MS.gene24570	0.813721	2.22E-51	-1.69E-46
MS.gene053824	MS.gene24570	0.858272	9.23E-63	-1.69E-46
MS.gene053916	MS.gene24570	0.873684	1.21E-67	-1.69E-46
MS.gene054408	MS.gene24570	0.847858	8.86E-60	-1.69E-46
MS.gene054600	MS.gene24570	0.805317	1.41E-49	-1.69E-46
MS.gene054642	MS.gene24570	0.82064	6.16E-53	-1.69E-46
MS.gene05494	MS.gene24570	0.883112	5.91E-71	-1.69E-46
MS.gene05505	MS.gene24570	0.855907	4.60E-62	-1.69E-46
MS.gene055206	MS.gene24570	0.846158	2.59E-59	-1.69E-46
MS.gene055224	MS.gene24570	0.850694	1.44E-60	-1.69E-46
MS.gene055289	MS.gene24570	0.818564	1.83E-52	-1.69E-46
MS.gene055577	MS.gene24570	0.826742	2.30E-54	-1.69E-46
MS.gene055722	MS.gene24570	0.816954	4.24E-52	-1.69E-46
MS.gene055748	MS.gene24570	0.824059	9.91E-54	-1.69E-46
MS.gene055750	MS.gene24570	0.812768	3.59E-51	-1.69E-46
MS.gene055751	MS.gene24570	0.81874	1.67E-52	-1.69E-46
MS.gene05592	MS.gene24570	0.835682	1.46E-56	-1.69E-46
MS.gene055941	MS.gene24570	0.817196	3.74E-52	-1.69E-46
MS.gene056449	MS.gene24570	0.802171	6.37E-49	-1.69E-46
MS.gene056897	MS.gene24570	0.822879	1.87E-53	-1.69E-46
MS.gene056903	MS.gene24570	0.810756	9.84E-51	-1.69E-46
MS.gene057124	MS.gene24570	0.802956	4.39E-49	-1.69E-46
MS.gene057129	MS.gene24570	0.821335	4.26E-53	-1.69E-46
MS.gene057331	MS.gene24570	0.800854	1.19E-48	-1.69E-46
MS.gene057416	MS.gene24570	0.803944	2.74E-49	-1.69E-46
MS.gene057926	MS.gene24570	0.808192	3.49E-50	-1.69E-46
MS.gene058006	MS.gene24570	0.832812	7.63E-56	-1.69E-46
MS.gene058130	MS.gene24570	0.851648	7.74E-61	-1.69E-46
MS.gene058323	MS.gene24570	0.834119	3.60E-56	-1.69E-46
MS.gene05837	MS.gene24570	0.821107	4.81E-53	-1.69E-46
MS.gene058419	MS.gene24570	0.807717	4.41E-50	-1.69E-46
MS.gene058723	MS.gene24570	0.816214	6.21E-52	-1.69E-46
MS.gene058773	MS.gene24570	0.823718	1.19E-53	-1.69E-46
MS.gene058838	MS.gene24570	0.824731	6.89E-54	-1.69E-46
MS.gene059023	MS.gene24570	0.839445	1.58E-57	-1.69E-46
MS.gene059305	MS.gene24570	0.8128	3.53E-51	-1.69E-46
MS.gene05934	MS.gene24570	0.813408	2.60E-51	-1.69E-46
MS.gene059677	MS.gene24570	0.802395	5.73E-49	-1.69E-46
MS.gene059718	MS.gene24570	0.817731	2.83E-52	-1.69E-46
MS.gene059902	MS.gene24570	0.831011	2.13E-55	-1.69E-46
MS.gene059960	MS.gene24570	0.812727	3.66E-51	-1.69E-46
MS.gene060762	MS.gene24570	0.819708	1.01E-52	-1.69E-46
MS.gene060818	MS.gene24570	0.82512	5.57E-54	-1.69E-46
MS.gene060837	MS.gene24570	0.821046	4.97E-53	-1.69E-46
MS.gene06092	MS.gene24570	0.843735	1.17E-58	-1.69E-46
MS.gene061041	MS.gene24570	0.81059	1.07E-50	-1.69E-46
MS.gene06111	MS.gene24570	0.800149	1.65E-48	-1.69E-46
MS.gene061150	MS.gene24570	0.832421	9.54E-56	-1.69E-46
MS.gene061200	MS.gene24570	0.800943	1.14E-48	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene24570.t1	MTR_1g016170	94.527	201	11	0	2	202	105	305	1.25e-129	367
MS.gene24570.t1	MTR_3g050550	80.233	86	17	0	2	87	9	94	2.63e-42	138
MS.gene24570.t1	MTR_3g050610	84.375	96	12	1	2	97	55	147	2.04e-41	137
MS.gene24570.t1	MTR_4g126350	44.037	109	40	4	5	113	128	215	2.22e-17	79.0
MS.gene24570.t1	MTR_2g038720	37.321	209	88	7	5	200	110	288	1.86e-16	76.3
MS.gene24570.t1	MTR_4g121110	54.237	59	27	0	70	128	16	74	4.78e-16	72.0
MS.gene24570.t1	MTR_7g112330	32.258	124	62	2	84	202	22	128	3.53e-13	64.3
MS.gene24570.t1	MTR_5g020230	57.692	52	19	1	72	120	107	158	2.35e-12	63.9
MS.gene24570.t1	MTR_1g094930	56.098	41	18	0	79	119	142	182	3.10e-11	60.8
MS.gene24570.t1	MTR_1g094930	56.098	41	18	0	79	119	237	277	5.01e-11	61.2
MS.gene24570.t1	MTR_8g077510	63.158	38	14	0	83	120	124	161	5.41e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene24570.t1	AT5G56860	42.748	131	48	6	5	117	142	263	6.64e-20	86.7
MS.gene24570.t1	AT5G49300	66.667	45	15	0	80	124	32	76	2.35e-17	75.5
MS.gene24570.t1	AT4G26150	43.363	113	33	4	5	115	147	230	8.15e-17	77.8
MS.gene24570.t1	AT5G26930	68.293	41	13	0	81	121	23	63	4.22e-16	71.6
MS.gene24570.t1	AT3G06740	66.667	42	14	0	81	122	38	79	9.30e-15	68.9
MS.gene24570.t1	AT4G16141	68.293	41	13	0	81	121	34	74	1.33e-14	69.7
MS.gene24570.t1	AT3G16870	57.143	56	20	1	81	136	39	90	2.53e-14	68.6
MS.gene24570.t1	AT4G36620	58.333	48	20	0	80	127	71	118	1.59e-12	64.3
MS.gene24570.t1	AT2G18380	68.293	41	12	1	84	123	92	132	3.57e-12	63.2
MS.gene24570.t1	AT5G25830	55.556	45	20	0	75	119	210	254	1.59e-11	62.8
MS.gene24570.t1	AT3G50870	65.789	38	13	0	83	120	151	188	2.43e-11	62.0
MS.gene24570.t1	AT1G08010	57.778	45	18	1	75	119	212	255	5.05e-11	60.8
MS.gene24570.t1	AT1G08010	57.778	45	18	1	75	119	212	255	5.05e-11	60.8
MS.gene24570.t1	AT1G08010	57.778	45	18	1	75	119	212	255	5.05e-11	60.8
MS.gene24570.t1	AT2G45050	46.000	50	27	0	70	119	165	214	6.33e-11	60.5
MS.gene24570.t1	AT1G08000	52.273	44	21	0	76	119	210	253	8.80e-11	60.5
MS.gene24570.t1	AT1G08000	52.273	44	21	0	76	119	210	253	8.80e-11	60.5

Find 49 sgRNAs with CRISPR-Local

Find 75 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGTTGTTTGGTCTCATTAT+TGG	0.223553	1.2:-6339317	None:intergenic
ATGATGAAACCTAGTAATTA+TGG	0.301261	1.2:+6339383	MS.gene24570:CDS
TTGTTACCGCTGTTACTACT+AGG	0.336848	1.2:-6339449	None:intergenic
TGTTACTACTAGGGCTTGTT+TGG	0.337618	1.2:-6339439	None:intergenic
CACTCCTCCATAGTGGGGTA+TGG	0.338618	1.2:-6339505	None:intergenic
GTCCAAGAAATCAAAATATA+AGG	0.340331	1.2:+6339411	MS.gene24570:CDS
TTTGCAATGCTTGTGGAATC+AGG	0.357272	1.2:+6340129	MS.gene24570:CDS
TCATCATAATCATAATCTAA+TGG	0.373491	1.2:-6340341	None:intergenic
AGCAACGGCGGCACGACTTC+TGG	0.401059	1.2:+6340367	MS.gene24570:CDS
TAATTACTAGGTTTCATCAT+TGG	0.409747	1.2:-6339380	None:intergenic
GTGGCTGCAATATTGTTGTT+TGG	0.421269	1.2:-6339329	None:intergenic
GGCTGAAGCTGCCAATGGTT+TGG	0.422143	1.2:+6340175	MS.gene24570:CDS
CGAATTACCTTTGGACCCAT+AGG	0.444966	1.2:-6339530	None:intergenic
GGACTAGTACCATAATTACT+AGG	0.449247	1.2:-6339392	None:intergenic
ACTATGGAGGAGTGGCCCTA+TGG	0.450797	1.2:+6339514	MS.gene24570:CDS
CTTCTGGTGGATATATCTTC+TGG	0.451597	1.2:+6340383	MS.gene24570:CDS
ACAGCGGTAACAACACCGTT+AGG	0.456940	1.2:+6339459	MS.gene24570:CDS
CTATGGAGGAGTGGCCCTAT+GGG	0.464867	1.2:+6339515	MS.gene24570:CDS
CTTGATAGCTTTGTCAGTAG+TGG	0.482210	1.2:-6339348	None:intergenic
ACTCCTCCATAGTGGGGTAT+GGG	0.482841	1.2:-6339504	None:intergenic
GTACATCCCATACCCCACTA+TGG	0.488777	1.2:+6339498	MS.gene24570:CDS
TTCTTAGTCTTGAATTGTGT+AGG	0.495944	1.2:-6340236	None:intergenic
TGGTCTCATTATTGGAGTTG+TGG	0.515285	1.2:-6339309	None:intergenic
TCAGGCAGAGAAAGGCAAGA+AGG	0.520139	1.2:+6340147	MS.gene24570:CDS
CAGGCAGAGAAAGGCAAGAA+GGG	0.526577	1.2:+6340148	MS.gene24570:CDS
GAATTACCTTTGGACCCATA+GGG	0.528192	1.2:-6339529	None:intergenic
TGAGTCACGGGTCTGAGAGA+TGG	0.533532	1.2:+6339231	MS.gene24570:CDS
AGGGGATGTAGCCAAACCAT+TGG	0.539225	1.2:-6340186	None:intergenic
CAGTCACTTTGCAATGCTTG+TGG	0.543553	1.2:+6340122	MS.gene24570:intron
CAGCGGTAACAACACCGTTA+GGG	0.546032	1.2:+6339460	MS.gene24570:CDS
ACCATTGGCAGCTTCAGCCA+TGG	0.551217	1.2:-6340171	None:intergenic
TTGTGGAATCAGGCAGAGAA+AGG	0.551715	1.2:+6340139	MS.gene24570:CDS
TAGGGCCACTCCTCCATAGT+GGG	0.558056	1.2:-6339511	None:intergenic
TGTTACCGCTGTTACTACTA+GGG	0.563428	1.2:-6339448	None:intergenic
ATAGGGCCACTCCTCCATAG+TGG	0.566452	1.2:-6339512	None:intergenic
AGAAGTAGTTGAAGTTGTAG+AGG	0.579757	1.2:-6340276	None:intergenic
GAGAAAGGCAAGAAGGGCCA+TGG	0.585866	1.2:+6340154	MS.gene24570:CDS
GAGTGGCCCTATGGGTCCAA+AGG	0.590272	1.2:+6339523	MS.gene24570:CDS
GATGGATGTCTTCAAAGATG+AGG	0.603732	1.2:+6339249	MS.gene24570:CDS
TGATTATGATGAAGCAGCAA+CGG	0.614524	1.2:+6340352	MS.gene24570:CDS
GCCATGGCTGAAGCTGCCAA+TGG	0.619219	1.2:+6340170	MS.gene24570:CDS
AACGGCGGCACGACTTCTGG+TGG	0.640817	1.2:+6340370	MS.gene24570:CDS
ACAATCAGAACAAACCCTAA+CGG	0.645452	1.2:-6339474	None:intergenic
ACAATTCAAGACTAAGAACA+AGG	0.668290	1.2:+6340241	MS.gene24570:CDS
CATACCCCACTATGGAGGAG+TGG	0.671274	1.2:+6339506	MS.gene24570:CDS
CATCCCATACCCCACTATGG+AGG	0.682705	1.2:+6339501	MS.gene24570:CDS
TTATGATGAAGCAGCAACGG+CGG	0.694941	1.2:+6340355	MS.gene24570:CDS
AGGGCCACTCCTCCATAGTG+GGG	0.711722	1.2:-6339510	None:intergenic
ACAAGCCCTAGTAGTAACAG+CGG	0.724459	1.2:+6339443	MS.gene24570:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATCAAATTAAGTTTAATTA+TGG	-	chr1.2:6340050-6340069	None:intergenic	10.0%
!!	ATTAATATTTATTGTTCATA+AGG	+	chr1.2:6339693-6339712	MS.gene24570:intron	10.0%
!!	TAATTAAAAAGATAAAATAG+AGG	-	chr1.2:6339877-6339896	None:intergenic	10.0%
!!	TGATAAAATATTTGTATTAA+AGG	-	chr1.2:6339780-6339799	None:intergenic	10.0%
!!	TTAATATTTATTGTTCATAA+GGG	+	chr1.2:6339694-6339713	MS.gene24570:intron	10.0%
!!!	ATTAATATATTTTTTTTGTG+GGG	-	chr1.2:6339679-6339698	None:intergenic	10.0%
!!!	GATATTAATAATTTTTGAGA+TGG	-	chr1.2:6339654-6339673	None:intergenic	15.0%
!!!	TGTTTTTGTAAGAATTTTTA+TGG	-	chr1.2:6339746-6339765	None:intergenic	15.0%
!!	ATTTGTATTAAAGGAAGTAA+AGG	-	chr1.2:6339771-6339790	None:intergenic	20.0%
!!	TCATCATAATCATAATCTAA+TGG	-	chr1.2:6340344-6340363	None:intergenic	20.0%
!!!	CGATAAATGATAAATTTTAG+TGG	-	chr1.2:6339620-6339639	None:intergenic	20.0%
!!!	TACCTTATATTTTGATTTCT+TGG	-	chr1.2:6339416-6339435	None:intergenic	20.0%
!	ACTATTCTTTCGTATTAAAG+TGG	+	chr1.2:6339571-6339590	MS.gene24570:intron	25.0%
!	ATACGAAAGAATAGTGAATA+AGG	-	chr1.2:6339566-6339585	None:intergenic	25.0%
!	ATGATGAAACCTAGTAATTA+TGG	+	chr1.2:6339383-6339402	MS.gene24570:CDS	25.0%
!	GTCCAAGAAATCAAAATATA+AGG	+	chr1.2:6339411-6339430	MS.gene24570:CDS	25.0%
!	TAAAAAGATAAAATAGAGGC+AGG	-	chr1.2:6339873-6339892	None:intergenic	25.0%
!	TAATTACTAGGTTTCATCAT+TGG	-	chr1.2:6339383-6339402	None:intergenic	25.0%
!	TAGTTAACATGAAAACATGT+TGG	+	chr1.2:6340097-6340116	MS.gene24570:intron	25.0%
!!!	ATCTTAAGCACTTTAGTTTT+AGG	-	chr1.2:6340209-6340228	None:intergenic	25.0%
!!!	TCTTAAGCACTTTAGTTTTA+GGG	-	chr1.2:6340208-6340227	None:intergenic	25.0%
	AAAGAATAGTGAATAAGGCT+GGG	-	chr1.2:6339561-6339580	None:intergenic	30.0%
	ACAATTCAAGACTAAGAACA+AGG	+	chr1.2:6340241-6340260	MS.gene24570:CDS	30.0%
	TTCATAAGGGATGTCAAATA+TGG	+	chr1.2:6339707-6339726	MS.gene24570:intron	30.0%
!	TTTAGTGGATCATAACAACA+AGG	-	chr1.2:6339605-6339624	None:intergenic	30.0%
!!	TTCTTAGTCTTGAATTGTGT+AGG	-	chr1.2:6340239-6340258	None:intergenic	30.0%
!!	TTGTTGTTTGGTCTCATTAT+TGG	-	chr1.2:6339320-6339339	None:intergenic	30.0%
!!!	CTTAAGCACTTTAGTTTTAG+GGG	-	chr1.2:6340207-6340226	None:intergenic	30.0%
	ACAATCAGAACAAACCCTAA+CGG	-	chr1.2:6339477-6339496	None:intergenic	35.0%
	AGAAGTAGTTGAAGTTGTAG+AGG	-	chr1.2:6340279-6340298	None:intergenic	35.0%
	GAAAGAATAGTGAATAAGGC+TGG	-	chr1.2:6339562-6339581	None:intergenic	35.0%
	TGATTATGATGAAGCAGCAA+CGG	+	chr1.2:6340352-6340371	MS.gene24570:CDS	35.0%
	TGGGATTAACGAATTACCTT+TGG	-	chr1.2:6339542-6339561	None:intergenic	35.0%
!	GGACTAGTACCATAATTACT+AGG	-	chr1.2:6339395-6339414	None:intergenic	35.0%
	GAATTACCTTTGGACCCATA+GGG	-	chr1.2:6339532-6339551	None:intergenic	40.0%
	GATGGATGTCTTCAAAGATG+AGG	+	chr1.2:6339249-6339268	MS.gene24570:CDS	40.0%
	TGGTCTCATTATTGGAGTTG+TGG	-	chr1.2:6339312-6339331	None:intergenic	40.0%
	TGTTACCGCTGTTACTACTA+GGG	-	chr1.2:6339451-6339470	None:intergenic	40.0%
	TTGTTACCGCTGTTACTACT+AGG	-	chr1.2:6339452-6339471	None:intergenic	40.0%
	TTTGCAATGCTTGTGGAATC+AGG	+	chr1.2:6340129-6340148	MS.gene24570:CDS	40.0%
!	CTTCTGGTGGATATATCTTC+TGG	+	chr1.2:6340383-6340402	MS.gene24570:CDS	40.0%
!	GTGGCTGCAATATTGTTGTT+TGG	-	chr1.2:6339332-6339351	None:intergenic	40.0%
!	TGTTACTACTAGGGCTTGTT+TGG	-	chr1.2:6339442-6339461	None:intergenic	40.0%
!!	CTTGATAGCTTTGTCAGTAG+TGG	-	chr1.2:6339351-6339370	None:intergenic	40.0%
	ACAAGCCCTAGTAGTAACAG+CGG	+	chr1.2:6339443-6339462	MS.gene24570:CDS	45.0%
	CGAATTACCTTTGGACCCAT+AGG	-	chr1.2:6339533-6339552	None:intergenic	45.0%
	TTATGATGAAGCAGCAACGG+CGG	+	chr1.2:6340355-6340374	MS.gene24570:CDS	45.0%
	TTGTGGAATCAGGCAGAGAA+AGG	+	chr1.2:6340139-6340158	MS.gene24570:CDS	45.0%
!	CAGTCACTTTGCAATGCTTG+TGG	+	chr1.2:6340122-6340141	MS.gene24570:intron	45.0%
!!!	ATATTAATATATTTTTTTTG+TGG	-	chr1.2:6339681-6339700	None:intergenic	5.0%
!!!	TAATTTTTATTATTATATCA+CGG	+	chr1.2:6339963-6339982	MS.gene24570:intron	5.0%
!!!	TATTAATATATTTTTTTTGT+GGG	-	chr1.2:6339680-6339699	None:intergenic	5.0%
	ACAGCGGTAACAACACCGTT+AGG	+	chr1.2:6339459-6339478	MS.gene24570:CDS	50.0%
	AGGGGATGTAGCCAAACCAT+TGG	-	chr1.2:6340189-6340208	None:intergenic	50.0%
	CAGCGGTAACAACACCGTTA+GGG	+	chr1.2:6339460-6339479	MS.gene24570:CDS	50.0%
	CAGGCAGAGAAAGGCAAGAA+GGG	+	chr1.2:6340148-6340167	MS.gene24570:CDS	50.0%
	GTACATCCCATACCCCACTA+TGG	+	chr1.2:6339498-6339517	MS.gene24570:CDS	50.0%
	TCAGGCAGAGAAAGGCAAGA+AGG	+	chr1.2:6340147-6340166	MS.gene24570:CDS	50.0%
!	ACTCCTCCATAGTGGGGTAT+GGG	-	chr1.2:6339507-6339526	None:intergenic	50.0%
	ACCATTGGCAGCTTCAGCCA+TGG	-	chr1.2:6340174-6340193	None:intergenic	55.0%
	ACTATGGAGGAGTGGCCCTA+TGG	+	chr1.2:6339514-6339533	MS.gene24570:CDS	55.0%
	ATAGGGCCACTCCTCCATAG+TGG	-	chr1.2:6339515-6339534	None:intergenic	55.0%
	CATACCCCACTATGGAGGAG+TGG	+	chr1.2:6339506-6339525	MS.gene24570:CDS	55.0%
	CATCCCATACCCCACTATGG+AGG	+	chr1.2:6339501-6339520	MS.gene24570:CDS	55.0%
	CTATGGAGGAGTGGCCCTAT+GGG	+	chr1.2:6339515-6339534	MS.gene24570:CDS	55.0%
	GAGAAAGGCAAGAAGGGCCA+TGG	+	chr1.2:6340154-6340173	MS.gene24570:CDS	55.0%
	GGCTGAAGCTGCCAATGGTT+TGG	+	chr1.2:6340175-6340194	MS.gene24570:CDS	55.0%
	TAGGGCCACTCCTCCATAGT+GGG	-	chr1.2:6339514-6339533	None:intergenic	55.0%
	TGAGTCACGGGTCTGAGAGA+TGG	+	chr1.2:6339231-6339250	MS.gene24570:CDS	55.0%
!	CACTCCTCCATAGTGGGGTA+TGG	-	chr1.2:6339508-6339527	None:intergenic	55.0%
	AGGGCCACTCCTCCATAGTG+GGG	-	chr1.2:6339513-6339532	None:intergenic	60.0%
	GAGTGGCCCTATGGGTCCAA+AGG	+	chr1.2:6339523-6339542	MS.gene24570:CDS	60.0%
	GCCATGGCTGAAGCTGCCAA+TGG	+	chr1.2:6340170-6340189	MS.gene24570:CDS	60.0%
	AACGGCGGCACGACTTCTGG+TGG	+	chr1.2:6340370-6340389	MS.gene24570:CDS	65.0%
	AGCAACGGCGGCACGACTTC+TGG	+	chr1.2:6340367-6340386	MS.gene24570:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	6339230	6340418	6339230	ID=MS.gene24570
chr1.2	mRNA	6339230	6340418	6339230	ID=MS.gene24570.t1;Parent=MS.gene24570
chr1.2	exon	6339230	6339544	6339230	ID=MS.gene24570.t1.exon1;Parent=MS.gene24570.t1
chr1.2	CDS	6339230	6339544	6339230	ID=cds.MS.gene24570.t1;Parent=MS.gene24570.t1
chr1.2	exon	6340125	6340418	6340125	ID=MS.gene24570.t1.exon2;Parent=MS.gene24570.t1
chr1.2	CDS	6340125	6340418	6340125	ID=cds.MS.gene24570.t1;Parent=MS.gene24570.t1

Gene Sequence

>MS.gene24570

ATGAGTCACGGGTCTGAGAGATGGATGTCTTCAAAGATGAGGTTGATGAATAAAATGATCAACAAAACTGCTACTGTTGCCACAACTCCAATAATGAGACCAAACAACAATATTGCAGCCACTACTGACAAAGCTATCAAGACAACAACTCCAATGATGAAACCTAGTAATTATGGTACTAGTCCAAGAAATCAAAATATAAGGTACAACCAAACAAGCCCTAGTAGTAACAGCGGTAACAACACCGTTAGGGTTTGTTCTGATTGTAGTACATCCCATACCCCACTATGGAGGAGTGGCCCTATGGGTCCAAAGGTAATTCGTTAATCCCAGCCTTATTCACTATTCTTTCGTATTAAAGTGGTAGAGTGACCTTGTTGTTATGATCCACTAAAATTTATCATTTATCGCTTCAATTCGTCCATCTCAAAAATTATTAATATCATCCCCACAAAAAAAATATATTAATATTTATTGTTCATAAGGGATGTCAAATATGGAATTTTATCAAGACCATAAAAATTCTTACAAAAACAATCCTTTACTTCCTTTAATACAAATATTTTATCAAAAAAATGTAGTATTCGTAGTAAAAGTTGAATTCATAGAAACGTCAAAATTAGAGATCAATTTAATTTTTCCTGCCTCTATTTTATCTTTTTAATTACAATATTTATAGTTTTGATATTCAAACATAAATAAGATATCAAGCTATATACAAGATCAATTAAAATAATTTTTATTATTATATCACGGTTTTAATTAGTCGAATATTTCGATAGATGATAGATCACACTAGAGTCATGCAAGTATTATTCCATAATTAAACTTAATTTGATTGATACTTGAATCATATCTAGTTATATATAGTTAACATGAAAACATGTTGGTGCAGTCACTTTGCAATGCTTGTGGAATCAGGCAGAGAAAGGCAAGAAGGGCCATGGCTGAAGCTGCCAATGGTTTGGCTACATCCCCTAAAACTAAAGTGCTTAAGATAAAGAAGCCTACACAATTCAAGACTAAGAACAAGGCTTCTACTAGTACCTCTACAACTTCAACTACTTCTGCTAGCTCATCATCTCAAGATGTGAAGAAACTTGAATCTTTTCCATTAGATTATGATTATGATGAAGCAGCAACGGCGGCACGACTTCTGGTGGATATATCTTCTGGTGTTACTTATTGA

Protein sequence

>MS.gene24570.t1

MSHGSERWMSSKMRLMNKMINKTATVATTPIMRPNNNIAATTDKAIKTTTPMMKPSNYGTSPRNQNIRYNQTSPSSNSGNNTVRVCSDCSTSHTPLWRSGPMGPKSLCNACGIRQRKARRAMAEAANGLATSPKTKVLKIKKPTQFKTKNKASTSTSTTSTTSASSSSQDVKKLESFPLDYDYDEAATAARLLVDISSGVTY