AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene52735


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52735.t1 MTR_7g094390 89.583 336 35 0 7 342 142 477 0.0 610
MS.gene52735.t1 MTR_7g024290 70.159 315 93 1 29 342 3 317 2.87e-156 441
MS.gene52735.t1 MTR_5g067400 68.371 313 99 0 29 341 3 315 7.60e-154 434
MS.gene52735.t1 MTR_1g046640 67.516 314 101 1 29 342 3 315 2.48e-150 426
MS.gene52735.t1 MTR_1g046650 67.093 313 102 1 30 342 4 315 7.62e-149 422
MS.gene52735.t1 MTR_1g046650 67.093 313 102 1 30 342 35 346 1.05e-148 422
MS.gene52735.t1 MTR_2g038430 62.573 342 115 2 14 342 2 343 7.89e-146 415
MS.gene52735.t1 MTR_5g076720 62.575 334 122 1 12 342 57 390 5.37e-145 415
MS.gene52735.t1 MTR_5g076660 63.720 328 116 1 13 337 9 336 4.76e-141 403
MS.gene52735.t1 MTR_1g046650 67.698 291 93 1 52 342 26 315 1.07e-137 394
MS.gene52735.t1 MTR_5g076520 65.815 313 103 2 29 337 3 315 9.08e-137 391
MS.gene52735.t1 MTR_5g076370 62.006 329 121 2 13 337 9 337 2.15e-136 391
MS.gene52735.t1 MTR_2g038420 60.180 334 128 2 14 342 2 335 1.55e-134 386
MS.gene52735.t1 MTR_5g076810 71.269 268 76 1 75 341 2 269 2.04e-134 384
MS.gene52735.t1 MTR_5g061290 60.923 325 119 3 24 342 5 327 5.31e-133 382
MS.gene52735.t1 MTR_5g076505 64.505 293 101 1 53 342 23 315 2.51e-130 375
MS.gene52735.t1 MTR_5g076820 65.704 277 87 5 29 300 12 285 1.35e-119 347
MS.gene52735.t1 MTR_1g046650 65.587 247 84 1 96 342 1 246 8.48e-112 325
MS.gene52735.t1 MTR_5g076540 70.667 225 66 0 30 254 4 228 4.03e-107 313
MS.gene52735.t1 MTR_5g077020 58.586 198 69 4 79 267 17 210 8.04e-70 218
MS.gene52735.t1 MTR_4g094468 45.740 223 120 1 28 250 88 309 3.29e-66 212
MS.gene52735.t1 MTR_4g058025 71.304 115 32 1 107 220 14 128 2.29e-50 166
MS.gene52735.t1 MTR_5g061310 61.039 77 30 0 266 342 1 77 4.65e-23 91.7
MS.gene52735.t1 MTR_7g085590 29.630 189 122 2 30 218 56 233 4.86e-23 97.4
MS.gene52735.t1 MTR_3g017590 28.191 188 112 5 6 174 7 190 7.24e-22 94.4
MS.gene52735.t1 MTR_7g105080 58.667 75 31 0 267 341 1 75 1.85e-20 86.3
MS.gene52735.t1 MTR_3g092130 58.667 75 31 0 267 341 1 75 1.85e-20 86.3
MS.gene52735.t1 MTR_1g059690 58.667 75 31 0 267 341 1 75 1.85e-20 86.3
MS.gene52735.t1 MTR_5g092700 58.667 75 31 0 267 341 1 75 2.17e-20 86.7
MS.gene52735.t1 MTR_5g092700 40.541 74 44 0 268 341 78 151 2.71e-11 61.6
MS.gene52735.t1 MTR_4g073580 58.667 75 31 0 267 341 1 75 2.17e-20 86.7
MS.gene52735.t1 MTR_4g073580 40.541 74 44 0 268 341 78 151 2.71e-11 61.6
MS.gene52735.t1 MTR_5g033960 58.667 75 31 0 267 341 1 75 2.55e-20 86.7
MS.gene52735.t1 MTR_8g088060 58.667 75 31 0 267 341 1 75 2.58e-20 86.7
MS.gene52735.t1 MTR_8g038370 28.182 220 147 6 27 235 101 320 3.19e-20 90.9
MS.gene52735.t1 MTR_4g073580 58.667 75 31 0 267 341 1 75 5.47e-20 86.7
MS.gene52735.t1 MTR_3g092130 58.667 75 31 0 267 341 1 75 7.41e-20 85.1
MS.gene52735.t1 MTR_4g088485 58.667 75 31 0 267 341 1 75 7.86e-20 87.0
MS.gene52735.t1 MTR_4g088485 58.667 75 31 0 267 341 138 212 7.86e-20 87.0
MS.gene52735.t1 MTR_7g116360 58.667 75 31 0 267 341 1 75 8.41e-20 87.0
MS.gene52735.t1 MTR_7g116360 58.667 75 31 0 267 341 77 151 8.41e-20 87.0
MS.gene52735.t1 MTR_7g116360 58.667 75 31 0 267 341 153 227 8.41e-20 87.0
MS.gene52735.t1 MTR_1g066390 58.667 75 31 0 267 341 1 75 9.08e-20 87.0
MS.gene52735.t1 MTR_1g066390 58.667 75 31 0 267 341 77 151 9.08e-20 87.0
MS.gene52735.t1 MTR_1g066390 58.667 75 31 0 267 341 153 227 9.08e-20 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 1 75 2.36e-19 86.7
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 77 151 2.36e-19 86.7
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 153 227 2.36e-19 86.7
MS.gene52735.t1 MTR_6g061930 58.667 75 31 0 267 341 1 75 2.73e-19 87.0
MS.gene52735.t1 MTR_6g061930 58.667 75 31 0 267 341 77 151 2.73e-19 87.0
MS.gene52735.t1 MTR_6g061930 58.667 75 31 0 267 341 214 288 2.73e-19 87.0
MS.gene52735.t1 MTR_7g116360 58.667 75 31 0 267 341 49 123 2.94e-19 86.7
MS.gene52735.t1 MTR_7g116360 58.667 75 31 0 267 341 125 199 2.94e-19 86.7
MS.gene52735.t1 MTR_7g116360 58.667 75 31 0 267 341 201 275 2.94e-19 86.7
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 1 75 2.99e-19 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 77 151 2.99e-19 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 153 227 2.99e-19 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 229 303 2.99e-19 87.0
MS.gene52735.t1 MTR_4g091580 58.667 75 31 0 267 341 305 379 5.27e-19 88.2
MS.gene52735.t1 MTR_4g091580 58.667 75 31 0 267 341 1 75 1.26e-18 87.0
MS.gene52735.t1 MTR_4g091580 58.667 75 31 0 267 341 77 151 1.26e-18 87.0
MS.gene52735.t1 MTR_4g091580 58.667 75 31 0 267 341 153 227 1.26e-18 87.0
MS.gene52735.t1 MTR_4g091580 58.667 75 31 0 267 341 229 303 1.26e-18 87.0
MS.gene52735.t1 MTR_4g091580 58.667 75 31 0 267 341 381 455 1.26e-18 87.0
MS.gene52735.t1 MTR_4g091580 58.667 75 31 0 267 341 457 531 1.26e-18 87.0
MS.gene52735.t1 MTR_4g080920 57.333 75 32 0 267 341 77 151 5.73e-19 84.7
MS.gene52735.t1 MTR_4g080920 57.333 75 32 0 267 341 1 75 1.27e-18 84.0
MS.gene52735.t1 MTR_4g080920 49.333 75 38 0 267 341 153 227 1.91e-14 72.0
MS.gene52735.t1 MTR_4g080797 58.667 75 31 0 267 341 1 75 6.36e-19 87.0
MS.gene52735.t1 MTR_4g080797 58.667 75 31 0 267 341 77 151 6.36e-19 87.0
MS.gene52735.t1 MTR_4g080797 58.667 75 31 0 267 341 153 227 6.36e-19 87.0
MS.gene52735.t1 MTR_4g080797 58.667 75 31 0 267 341 229 303 6.36e-19 87.0
MS.gene52735.t1 MTR_4g080797 58.667 75 31 0 267 341 305 379 6.36e-19 87.0
MS.gene52735.t1 MTR_4g091580 58.667 75 31 0 267 341 1 75 6.36e-19 87.0
MS.gene52735.t1 MTR_4g091580 58.667 75 31 0 267 341 77 151 6.36e-19 87.0
MS.gene52735.t1 MTR_4g091580 58.667 75 31 0 267 341 153 227 6.36e-19 87.0
MS.gene52735.t1 MTR_4g091580 58.667 75 31 0 267 341 305 379 6.36e-19 87.0
MS.gene52735.t1 MTR_4g091580 57.333 75 32 0 267 341 229 303 2.04e-18 85.9
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 1 75 6.36e-19 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 77 151 6.36e-19 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 153 227 6.36e-19 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 229 303 6.36e-19 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 305 379 6.36e-19 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 1 75 6.54e-19 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 77 151 6.54e-19 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 153 227 6.54e-19 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 229 303 6.54e-19 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 305 379 6.54e-19 87.0
MS.gene52735.t1 MTR_8g081020 58.667 75 31 0 267 341 1 75 6.60e-19 87.0
MS.gene52735.t1 MTR_8g081020 58.667 75 31 0 267 341 77 151 6.60e-19 87.0
MS.gene52735.t1 MTR_8g081020 58.667 75 31 0 267 341 153 227 6.60e-19 87.0
MS.gene52735.t1 MTR_8g081020 58.667 75 31 0 267 341 229 303 6.60e-19 87.0
MS.gene52735.t1 MTR_8g081020 58.667 75 31 0 267 341 305 379 6.60e-19 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 1 75 6.84e-19 85.5
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 77 151 6.84e-19 85.5
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 153 227 6.84e-19 85.5
MS.gene52735.t1 MTR_8g027520 33.333 141 91 2 29 166 45 185 8.48e-19 85.9
MS.gene52735.t1 MTR_8g027520 33.333 141 91 2 29 166 36 176 9.14e-19 85.9
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 1 75 1.01e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 77 151 1.01e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 153 227 1.01e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 229 303 1.01e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 305 379 1.01e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 381 455 1.01e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 1 75 1.01e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 77 151 1.01e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 153 227 1.01e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 229 303 1.01e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 305 379 1.01e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 381 455 1.01e-18 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 1 75 1.24e-18 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 77 151 1.24e-18 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 153 227 1.24e-18 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 229 303 1.24e-18 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 305 379 1.24e-18 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 381 455 1.24e-18 87.0
MS.gene52735.t1 MTR_4g081010 58.667 75 31 0 267 341 457 531 1.24e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 1 75 1.26e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 77 151 1.26e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 153 227 1.26e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 229 303 1.26e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 305 379 1.26e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 381 455 1.26e-18 87.0
MS.gene52735.t1 MTR_8g018230 58.667 75 31 0 267 341 457 531 1.26e-18 87.0
MS.gene52735.t1 MTR_4g088495 58.667 75 31 0 267 341 77 151 1.63e-18 87.0
MS.gene52735.t1 MTR_4g088495 58.667 75 31 0 267 341 153 227 1.63e-18 87.0
MS.gene52735.t1 MTR_4g088495 58.667 75 31 0 267 341 229 303 1.63e-18 87.0
MS.gene52735.t1 MTR_4g088495 58.667 75 31 0 267 341 305 379 1.63e-18 87.0
MS.gene52735.t1 MTR_4g088495 58.667 75 31 0 267 341 381 455 1.63e-18 87.0
MS.gene52735.t1 MTR_4g088495 58.667 75 31 0 267 341 457 531 1.63e-18 87.0
MS.gene52735.t1 MTR_4g088495 58.667 75 31 0 267 341 533 607 1.63e-18 87.0
MS.gene52735.t1 MTR_4g088495 58.667 75 31 0 267 341 609 683 1.63e-18 87.0
MS.gene52735.t1 MTR_4g088495 58.667 75 31 0 267 341 685 759 1.63e-18 87.0
MS.gene52735.t1 MTR_4g088495 58.667 75 31 0 267 341 761 835 1.63e-18 87.0
MS.gene52735.t1 MTR_4g088495 58.667 75 31 0 267 341 1 75 2.30e-18 86.7
MS.gene52735.t1 MTR_4g009980 52.239 67 32 0 276 342 5 71 3.42e-18 78.2
MS.gene52735.t1 MTR_3g091510 31.944 144 95 2 26 166 49 192 3.86e-18 84.3
MS.gene52735.t1 MTR_1g008120 31.724 145 96 2 25 166 56 200 1.87e-17 82.4
MS.gene52735.t1 MTR_5g076740 56.579 76 32 1 267 341 86 161 2.01e-17 79.0
MS.gene52735.t1 MTR_7g117415 31.206 141 94 2 29 166 53 193 3.38e-17 81.6
MS.gene52735.t1 MTR_1g054335 29.341 167 112 3 37 197 58 224 6.79e-17 80.5
MS.gene52735.t1 MTR_5g076350 49.367 79 40 0 264 342 6 84 5.77e-16 72.4
MS.gene52735.t1 MTR_8g479250 52.941 85 40 0 257 341 131 215 7.72e-16 77.4
MS.gene52735.t1 MTR_7g093600 30.534 131 88 2 37 164 59 189 9.00e-16 77.4
MS.gene52735.t1 MTR_5g076340 52.564 78 35 2 267 342 9 86 1.14e-14 68.9
MS.gene52735.t1 MTR_5g076760 59.649 57 23 0 277 333 5 61 1.83e-13 65.5
MS.gene52735.t1 MTR_7g085080 58.929 56 23 0 266 321 8 63 6.28e-13 63.9
MS.gene52735.t1 MTR_5g076780 53.571 56 26 0 281 336 4 59 7.16e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52735.t1 AT5G37930 36.667 240 144 3 30 263 103 340 1.34e-48 167
MS.gene52735.t1 AT5G37890 32.773 238 154 4 17 250 30 265 4.11e-38 137
MS.gene52735.t1 AT5G37870 34.975 203 126 4 21 217 23 225 6.63e-38 137
MS.gene52735.t1 AT1G66630 32.540 252 159 5 11 251 16 267 5.08e-36 132
MS.gene52735.t1 AT1G66620 29.851 268 176 5 7 263 8 274 1.81e-34 129
MS.gene52735.t1 AT1G66650 35.829 187 114 3 25 205 71 257 4.78e-33 125
MS.gene52735.t1 AT5G62800 36.517 178 108 3 37 209 40 217 1.54e-30 118
MS.gene52735.t1 AT5G62800 36.517 178 108 3 37 209 40 217 1.84e-30 119
MS.gene52735.t1 AT5G37910 29.084 251 168 5 10 250 4 254 5.45e-29 113
MS.gene52735.t1 AT1G66660 32.804 189 119 3 19 200 85 272 3.89e-27 109
MS.gene52735.t1 AT1G66610 25.887 282 141 7 37 250 53 334 8.84e-22 95.1
MS.gene52735.t1 AT4G05050 58.667 75 31 0 267 341 1 75 1.80e-20 87.0
MS.gene52735.t1 AT4G05050 58.667 75 31 0 267 341 77 151 1.80e-20 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 1 75 1.80e-20 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 77 151 1.80e-20 87.0
MS.gene52735.t1 AT2G35635 58.667 75 31 0 267 341 1 75 2.55e-20 86.7
MS.gene52735.t1 AT3G52590 58.667 75 31 0 267 341 1 75 2.56e-20 85.9
MS.gene52735.t1 AT2G36170 58.667 75 31 0 267 341 1 75 2.56e-20 85.9
MS.gene52735.t1 AT1G23410 58.667 75 31 0 267 341 1 75 2.60e-20 86.7
MS.gene52735.t1 AT1G31340 58.667 75 31 0 267 341 1 75 2.63e-20 86.7
MS.gene52735.t1 AT1G31340 40.541 74 44 0 268 341 78 151 1.86e-11 62.0
MS.gene52735.t1 AT2G47110 58.667 75 31 0 267 341 1 75 2.99e-20 86.7
MS.gene52735.t1 AT2G47110 58.667 75 31 0 267 341 1 75 2.99e-20 86.7
MS.gene52735.t1 AT3G62250 58.667 75 31 0 267 341 1 75 3.59e-20 86.3
MS.gene52735.t1 AT4G05050 58.667 75 31 0 267 341 1 75 8.81e-20 87.0
MS.gene52735.t1 AT4G05050 58.667 75 31 0 267 341 77 151 8.81e-20 87.0
MS.gene52735.t1 AT4G05050 58.667 75 31 0 267 341 153 227 8.81e-20 87.0
MS.gene52735.t1 AT4G05050 58.667 75 31 0 267 341 1 75 8.81e-20 87.0
MS.gene52735.t1 AT4G05050 58.667 75 31 0 267 341 77 151 8.81e-20 87.0
MS.gene52735.t1 AT4G05050 58.667 75 31 0 267 341 153 227 8.81e-20 87.0
MS.gene52735.t1 AT4G05050 58.667 75 31 0 267 341 1 75 8.81e-20 87.0
MS.gene52735.t1 AT4G05050 58.667 75 31 0 267 341 77 151 8.81e-20 87.0
MS.gene52735.t1 AT4G05050 58.667 75 31 0 267 341 153 227 8.81e-20 87.0
MS.gene52735.t1 AT4G02890 58.667 75 31 0 267 341 1 75 8.81e-20 87.0
MS.gene52735.t1 AT4G02890 58.667 75 31 0 267 341 77 151 8.81e-20 87.0
MS.gene52735.t1 AT4G02890 58.667 75 31 0 267 341 153 227 8.81e-20 87.0
MS.gene52735.t1 AT4G02890 58.667 75 31 0 267 341 1 75 8.81e-20 87.0
MS.gene52735.t1 AT4G02890 58.667 75 31 0 267 341 77 151 8.81e-20 87.0
MS.gene52735.t1 AT4G02890 58.667 75 31 0 267 341 153 227 8.81e-20 87.0
MS.gene52735.t1 AT5G37640 52.941 85 40 0 257 341 69 153 2.55e-19 87.8
MS.gene52735.t1 AT5G37640 57.333 75 32 0 267 341 155 229 4.50e-17 81.3
MS.gene52735.t1 AT5G37640 56.579 76 32 1 267 341 231 306 6.90e-16 77.8
MS.gene52735.t1 AT5G37640 50.667 75 37 0 267 341 3 77 1.08e-12 68.6
MS.gene52735.t1 AT1G55060 57.333 75 32 0 267 341 77 151 2.65e-19 85.9
MS.gene52735.t1 AT1G55060 56.000 75 33 0 267 341 153 227 1.51e-17 80.9
MS.gene52735.t1 AT1G55060 53.333 75 35 0 267 341 1 75 4.19e-16 77.0
MS.gene52735.t1 AT5G03240 58.667 75 31 0 267 341 1 75 2.93e-19 87.4
MS.gene52735.t1 AT5G03240 58.667 75 31 0 267 341 77 151 2.93e-19 87.4
MS.gene52735.t1 AT5G03240 58.667 75 31 0 267 341 153 227 2.93e-19 87.4
MS.gene52735.t1 AT5G03240 58.667 75 31 0 267 341 229 303 2.93e-19 87.4
MS.gene52735.t1 AT5G03240 58.667 75 31 0 267 341 1 75 2.93e-19 87.4
MS.gene52735.t1 AT5G03240 58.667 75 31 0 267 341 77 151 2.93e-19 87.4
MS.gene52735.t1 AT5G03240 58.667 75 31 0 267 341 153 227 2.93e-19 87.4
MS.gene52735.t1 AT5G03240 58.667 75 31 0 267 341 229 303 2.93e-19 87.4
MS.gene52735.t1 AT5G03240 58.667 75 31 0 267 341 1 75 2.93e-19 87.4
MS.gene52735.t1 AT5G03240 58.667 75 31 0 267 341 77 151 2.93e-19 87.4
MS.gene52735.t1 AT5G03240 58.667 75 31 0 267 341 153 227 2.93e-19 87.4
MS.gene52735.t1 AT5G03240 58.667 75 31 0 267 341 229 303 2.93e-19 87.4
MS.gene52735.t1 AT5G20620 58.667 75 31 0 267 341 1 75 2.93e-19 87.4
MS.gene52735.t1 AT5G20620 58.667 75 31 0 267 341 77 151 2.93e-19 87.4
MS.gene52735.t1 AT5G20620 58.667 75 31 0 267 341 153 227 2.93e-19 87.4
MS.gene52735.t1 AT5G20620 58.667 75 31 0 267 341 229 303 2.93e-19 87.4
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 1 75 3.10e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 77 151 3.10e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 153 227 3.10e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 229 303 3.10e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 1 75 3.10e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 77 151 3.10e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 153 227 3.10e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 229 303 3.10e-19 87.0
MS.gene52735.t1 AT4G02890 58.667 75 31 0 267 341 1 75 3.10e-19 87.0
MS.gene52735.t1 AT4G02890 58.667 75 31 0 267 341 77 151 3.10e-19 87.0
MS.gene52735.t1 AT4G02890 58.667 75 31 0 267 341 153 227 3.10e-19 87.0
MS.gene52735.t1 AT4G02890 58.667 75 31 0 267 341 229 303 3.10e-19 87.0
MS.gene52735.t1 AT4G02890 58.667 75 31 0 267 341 1 75 3.10e-19 87.0
MS.gene52735.t1 AT4G02890 58.667 75 31 0 267 341 77 151 3.10e-19 87.0
MS.gene52735.t1 AT4G02890 58.667 75 31 0 267 341 153 227 3.10e-19 87.0
MS.gene52735.t1 AT4G02890 58.667 75 31 0 267 341 229 303 3.10e-19 87.0
MS.gene52735.t1 AT1G65350 58.667 75 31 0 267 341 152 226 3.81e-19 87.0
MS.gene52735.t1 AT1G65350 58.667 75 31 0 267 341 1 75 3.96e-19 87.0
MS.gene52735.t1 AT1G65350 57.333 75 31 1 267 341 77 150 2.05e-16 79.3
MS.gene52735.t1 AT1G65350 47.191 89 33 1 267 341 228 316 1.10e-13 71.2
MS.gene52735.t1 AT5G20620 58.667 75 31 0 267 341 1 75 6.46e-19 87.4
MS.gene52735.t1 AT5G20620 58.667 75 31 0 267 341 77 151 6.46e-19 87.4
MS.gene52735.t1 AT5G20620 58.667 75 31 0 267 341 153 227 6.46e-19 87.4
MS.gene52735.t1 AT5G20620 58.667 75 31 0 267 341 229 303 6.46e-19 87.4
MS.gene52735.t1 AT5G20620 58.667 75 31 0 267 341 305 379 6.46e-19 87.4
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 1 75 6.66e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 77 151 6.66e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 153 227 6.66e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 229 303 6.66e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 305 379 6.66e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 1 75 6.66e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 77 151 6.66e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 153 227 6.66e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 229 303 6.66e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 305 379 6.66e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 1 75 6.66e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 77 151 6.66e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 153 227 6.66e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 229 303 6.66e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 305 379 6.66e-19 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 1 75 1.05e-18 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 77 151 1.05e-18 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 153 227 1.05e-18 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 229 303 1.05e-18 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 305 379 1.05e-18 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 381 455 1.05e-18 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 1 75 1.05e-18 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 77 151 1.05e-18 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 153 227 1.05e-18 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 229 303 1.05e-18 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 305 379 1.05e-18 87.0
MS.gene52735.t1 AT4G05320 58.667 75 31 0 267 341 381 455 1.05e-18 87.0
MS.gene52735.t1 AT3G61790 30.986 142 95 2 28 166 51 192 4.60e-18 84.0
MS.gene52735.t1 AT1G53930 52.113 71 34 0 266 336 85 155 2.83e-17 78.6
MS.gene52735.t1 AT3G09790 58.667 75 31 0 267 341 79 153 4.05e-17 82.8
MS.gene52735.t1 AT3G09790 56.164 73 32 0 269 341 5 77 2.06e-16 80.9
MS.gene52735.t1 AT3G09790 56.338 71 31 0 267 337 552 622 8.44e-15 75.9
MS.gene52735.t1 AT3G09790 56.250 64 28 0 273 336 249 312 3.68e-13 70.9
MS.gene52735.t1 AT3G09790 52.000 75 34 2 267 339 319 393 7.82e-12 66.6
MS.gene52735.t1 AT3G09790 58.667 75 31 0 267 341 79 153 4.05e-17 82.8
MS.gene52735.t1 AT3G09790 56.164 73 32 0 269 341 5 77 2.06e-16 80.9
MS.gene52735.t1 AT3G09790 56.338 71 31 0 267 337 552 622 8.44e-15 75.9
MS.gene52735.t1 AT3G09790 56.250 64 28 0 273 336 249 312 3.68e-13 70.9
MS.gene52735.t1 AT3G09790 52.000 75 34 2 267 339 319 393 7.82e-12 66.6
MS.gene52735.t1 AT4G27880 32.090 134 88 2 36 166 60 193 1.54e-16 79.7
MS.gene52735.t1 AT3G58040 29.104 134 92 2 36 166 56 189 1.01e-15 75.5
MS.gene52735.t1 AT1G66610 40.594 101 56 3 7 103 124 224 1.73e-15 75.5
MS.gene52735.t1 AT1G66610 48.387 62 32 0 37 98 53 114 4.13e-12 65.5
MS.gene52735.t1 AT3G58040 29.104 134 92 2 36 166 56 189 2.69e-15 75.9
MS.gene52735.t1 AT3G58040 29.104 134 92 2 36 166 56 189 2.69e-15 75.9
MS.gene52735.t1 AT2G41980 30.508 118 80 1 36 151 53 170 1.58e-14 73.6
MS.gene52735.t1 AT1G53950 43.056 72 41 0 266 337 68 139 8.44e-12 62.8

Find 71 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAAGCATTCCCGTCTTTC+AGG 0.148640 7.2:-15189819 MS.gene52735:intron
ATGTAGCAATCAAGCACTTT+AGG 0.201760 7.2:+15189854 None:intergenic
CTTCTCTTGGATGTTGTAAT+TGG 0.203344 7.2:+15187161 None:intergenic
TATTAGAATCCCTGTGTTTA+TGG 0.246961 7.2:+15187996 None:intergenic
CGATTATGGTTATGATATAT+TGG 0.280239 7.2:-15187807 MS.gene52735:CDS
GGACTGACCATAAGAAAATT+TGG 0.280534 7.2:+15187973 None:intergenic
TTCGCACACGACTGAAATTT+CGG 0.286992 7.2:+15187764 None:intergenic
AAGTCTTCTCAGTCCGATTA+TGG 0.288095 7.2:-15187821 MS.gene52735:CDS
TGTAGCAATCAAGCACTTTA+GGG 0.305109 7.2:+15189855 None:intergenic
TCATGTTCGAATGCAAAATA+TGG 0.330815 7.2:-15188148 MS.gene52735:CDS
GGACACTTGTTCCTAAGTTT+AGG 0.336322 7.2:+15188241 None:intergenic
TTGGAAATCACCACAGGAAT+GGG 0.365524 7.2:+15189878 None:intergenic
CTGAAAGACGGGAATGCTTA+AGG 0.370558 7.2:+15189820 None:intergenic
GCTGTTATCTAGTTCCTTAC+CGG 0.383037 7.2:+15187194 None:intergenic
GAGTTCCTTGTGATTCCATT+TGG 0.383289 7.2:-15187704 MS.gene52735:CDS
GCAATCAATATTTGTTGCAT+TGG 0.386905 7.2:-15187848 MS.gene52735:CDS
ATTTGACGGTTGACTTCTCT+TGG 0.396408 7.2:+15187148 None:intergenic
CAATATATCATAACCATAAT+CGG 0.398763 7.2:+15187808 None:intergenic
GTTGCAATTCAGTGTGATAA+TGG 0.405881 7.2:-15188289 MS.gene52735:intron
ATGCAGTGTCTGATCTTTGC+CGG 0.411324 7.2:-15187213 MS.gene52735:CDS
AGTTTCATCATTAGACTTCA+AGG 0.423958 7.2:+15187940 None:intergenic
TGAAAGACGGGAATGCTTAA+GGG 0.427945 7.2:+15189821 None:intergenic
CAAATTCGTCCTCTGCATCA+TGG 0.445144 7.2:-15187130 MS.gene52735:CDS
AAATTCGTCCTCTGCATCAT+GGG 0.447145 7.2:-15187129 MS.gene52735:CDS
CTTGGATGTTGTAATTGGCA+AGG 0.467473 7.2:+15187166 None:intergenic
ATATACATATTGACCATCAC+TGG 0.468346 7.2:-15187324 MS.gene52735:CDS
GTTCCTAAGTTTAGGATAGC+AGG 0.474052 7.2:+15188249 None:intergenic
GCTAATGCGCAATGAGCACT+TGG 0.479365 7.2:+15188219 None:intergenic
ATCAGACACTGCATATGCAT+TGG 0.491915 7.2:+15187222 None:intergenic
TCAGACACTGCATATGCATT+GGG 0.497445 7.2:+15187223 None:intergenic
GAGGGCAGTAGCACGGCTCA+TGG 0.499884 7.2:+15188071 None:intergenic
TGTCTGAACTCTTAACCCTC+AGG 0.500687 7.2:+15187289 None:intergenic
GTTGGAAATCACCACAGGAA+TGG 0.503182 7.2:+15189877 None:intergenic
GATGCAACAAAGTCACAATC+TGG 0.507014 7.2:+15188046 None:intergenic
ATGCAAATTTCTAGCTCGAA+AGG 0.509418 7.2:+15187671 None:intergenic
GCAATCAAGCACTTTAGGGT+TGG 0.512106 7.2:+15189859 None:intergenic
AAAGGTTCAGAAGAACCAAA+TGG 0.514036 7.2:+15187689 None:intergenic
GATGCAGAGGACGAATTTGA+CGG 0.520883 7.2:+15187134 None:intergenic
GGCGATCCTCTTTCCAGTGA+TGG 0.521029 7.2:+15187311 None:intergenic
TAATCGGACTGAGAAGACTT+TGG 0.522550 7.2:+15187824 None:intergenic
TGGATACGTACCTGAAAGAC+GGG 0.525785 7.2:+15189809 None:intergenic
GTGTCTGATCTTTGCCGGTA+AGG 0.529338 7.2:-15187208 MS.gene52735:CDS
ACAAAGTCACAATCTGGCAG+AGG 0.531500 7.2:+15188052 None:intergenic
CTACCTGCTATCCTAAACTT+AGG 0.540082 7.2:-15188252 MS.gene52735:CDS
GAACAAGTTACATTGGAAAG+AGG 0.546607 7.2:-15188114 MS.gene52735:CDS
GTTCTTCAAGAGAAAAGTGA+TGG 0.555772 7.2:-15187914 MS.gene52735:CDS
TTGGATGTTGTAATTGGCAA+GGG 0.555821 7.2:+15187167 None:intergenic
AGATAGCAATAGATTCTCAA+TGG 0.569736 7.2:+15188180 None:intergenic
GTCTGAACTCTTAACCCTCA+GGG 0.573038 7.2:+15187290 None:intergenic
TATTGACCATCACTGGAAAG+AGG 0.575823 7.2:-15187317 MS.gene52735:CDS
ATGGATACGTACCTGAAAGA+CGG 0.587197 7.2:+15189808 None:intergenic
AGCATGTCAACCATAAACAC+AGG 0.598137 7.2:-15188006 MS.gene52735:CDS
AGAGAGAGAACAAGTTACAT+TGG 0.598937 7.2:-15188121 MS.gene52735:CDS
AATTCGTCCTCTGCATCATG+GGG 0.602029 7.2:-15187128 MS.gene52735:CDS
TGGAAAGAGGATCGCCCTGA+GGG 0.604972 7.2:-15187304 MS.gene52735:CDS
AGACTTCAAGGAGACAATGA+AGG 0.605737 7.2:+15187952 None:intergenic
TTAGGGTTGGAAATCACCAC+AGG 0.609264 7.2:+15189872 None:intergenic
AAGAATCTTCTCCTTCACAT+TGG 0.613844 7.2:+15187260 None:intergenic
TCTGGCAGAGGGCAGTAGCA+CGG 0.619325 7.2:+15188064 None:intergenic
CAAAGTCACAATCTGGCAGA+GGG 0.635490 7.2:+15188053 None:intergenic
TGGAAATCACCACAGGAATG+GGG 0.639175 7.2:+15189879 None:intergenic
GAAGGAGAAGATTCTTGACA+AGG 0.642223 7.2:-15187253 MS.gene52735:CDS
AGACACGATAGCCAATGTGA+AGG 0.673184 7.2:-15187271 MS.gene52735:CDS
TAAGAATAGCCCCATTCCTG+TGG 0.673390 7.2:-15189888 MS.gene52735:CDS
CGTGTGCGAATAATGTGCAA+CGG 0.684678 7.2:-15187751 MS.gene52735:CDS
AAGAACCAAATGGAATCACA+AGG 0.686822 7.2:+15187699 None:intergenic
CTGGAAAGAGGATCGCCCTG+AGG 0.691192 7.2:-15187305 MS.gene52735:CDS
GCATGTCAACCATAAACACA+GGG 0.694639 7.2:-15188005 MS.gene52735:CDS
CTAATGCGCAATGAGCACTT+GGG 0.698509 7.2:+15188220 None:intergenic
ATTCGTCCTCTGCATCATGG+GGG 0.735750 7.2:-15187127 MS.gene52735:CDS
GGATATAGGAGGTACCATGG+GGG 0.759816 7.2:+15187646 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATAATAAGATTTTGAT+AGG + chr7.2:15189607-15189626 None:intergenic 10.0%
!!! AAAAATAATAAGGAAAATTT+TGG - chr7.2:15187688-15187707 MS.gene52735:CDS 10.0%
!! AAATAAGAGAATTCTTTATA+AGG + chr7.2:15188845-15188864 None:intergenic 15.0%
!! AACCATTTATTAGAAAATTA+AGG - chr7.2:15188083-15188102 MS.gene52735:CDS 15.0%
!! AATAAGAGAATTCTTTATAA+GGG + chr7.2:15188844-15188863 None:intergenic 15.0%
!! TTTGTTTCAATTAATAATTG+TGG + chr7.2:15187606-15187625 None:intergenic 15.0%
!!! ACTACTAAAACTATTATTTT+AGG + chr7.2:15187548-15187567 None:intergenic 15.0%
!!! ATCCTTAATTTTCTAATAAA+TGG + chr7.2:15188088-15188107 None:intergenic 15.0%
!!! CTTTAAAAATGAAATATTAG+AGG + chr7.2:15187644-15187663 None:intergenic 15.0%
!! AAAAAAAACAAGCAAAGAAA+AGG + chr7.2:15189583-15189602 None:intergenic 20.0%
!! AAATTAAGGATGAATATTAG+AGG - chr7.2:15188097-15188116 MS.gene52735:CDS 20.0%
!! ACAAAATACTTAGACAAAAA+AGG - chr7.2:15188256-15188275 MS.gene52735:CDS 20.0%
!! CAATATATCATAACCATAAT+CGG + chr7.2:15189400-15189419 None:intergenic 20.0%
!!! AAACAGTAACATTCTTTTTT+TGG + chr7.2:15189686-15189705 None:intergenic 20.0%
!!! AATAATAGTACTATGCTTTT+TGG - chr7.2:15189330-15189349 MS.gene52735:intron 20.0%
!!! AGACTTTGATATTATCTTTT+AGG - chr7.2:15187921-15187940 MS.gene52735:CDS 20.0%
!!! GTTACTGTTTTTCTATTTTT+TGG - chr7.2:15189696-15189715 MS.gene52735:intron 20.0%
!!! TAGTTTTAGTAGTTTTATGT+AGG - chr7.2:15187555-15187574 MS.gene52735:intron 20.0%
!!! TCTAATACCAAATTTTCTTA+TGG - chr7.2:15189225-15189244 MS.gene52735:intron 20.0%
!!! TTTATCATTGATTAATGTGT+TGG - chr7.2:15189838-15189857 MS.gene52735:CDS 20.0%
!!! TTTTATTTTGTTTTAGCAAG+TGG - chr7.2:15188862-15188881 MS.gene52735:intron 20.0%
! AAAATTTATTACAGCACAAC+AGG + chr7.2:15189789-15189808 None:intergenic 25.0%
! AAACCAAATGTAAAGCAAAT+AGG + chr7.2:15188616-15188635 None:intergenic 25.0%
! AAATTTATTACAGCACAACA+GGG + chr7.2:15189788-15189807 None:intergenic 25.0%
! AACAAGTATTTCACTTTAGA+GGG - chr7.2:15188044-15188063 MS.gene52735:CDS 25.0%
! AACATATATGTATCCAACAA+CGG + chr7.2:15188788-15188807 None:intergenic 25.0%
! AATGAAATATTAGAGGAAGT+TGG + chr7.2:15187637-15187656 None:intergenic 25.0%
! AGAGATAGTGATTCTATTTA+AGG - chr7.2:15188528-15188547 MS.gene52735:intron 25.0%
! CGATTATGGTTATGATATAT+TGG - chr7.2:15189398-15189417 MS.gene52735:intron 25.0%
! GTAATTCAAACTTACAAAAC+TGG - chr7.2:15187950-15187969 MS.gene52735:CDS 25.0%
! TAAATATGAGTCTATAAGCA+AGG + chr7.2:15187995-15188014 None:intergenic 25.0%
! TAACAAGTATTTCACTTTAG+AGG - chr7.2:15188043-15188062 MS.gene52735:CDS 25.0%
! TTCTACTGTATGTTTACTTA+GGG - chr7.2:15187448-15187467 MS.gene52735:intron 25.0%
! TTGCTTATAGACTCATATTT+AGG - chr7.2:15187994-15188013 MS.gene52735:CDS 25.0%
! TTTCAAATTATTAGCTGTGT+CGG + chr7.2:15188396-15188415 None:intergenic 25.0%
! TTTCTACTGTATGTTTACTT+AGG - chr7.2:15187447-15187466 MS.gene52735:intron 25.0%
!! ATTCTTACCATCATCTTTTT+CGG + chr7.2:15187304-15187323 None:intergenic 25.0%
!! TGCTGTAATAAATTTTGCAA+TGG - chr7.2:15189793-15189812 MS.gene52735:intron 25.0%
!!! ACTTACAAAACTGGTTTTTA+AGG - chr7.2:15187959-15187978 MS.gene52735:CDS 25.0%
!!! TAATTTTCTCACTTTAGAAG+AGG - chr7.2:15188159-15188178 MS.gene52735:CDS 25.0%
AAAACGCTATATCAAAGTCT+AGG + chr7.2:15188749-15188768 None:intergenic 30.0%
AAACGCTATATCAAAGTCTA+GGG + chr7.2:15188748-15188767 None:intergenic 30.0%
ACAAGCAAAGAAAAGGATAT+AGG + chr7.2:15189576-15189595 None:intergenic 30.0%
AGAAGGATGTATAAAACTGT+AGG + chr7.2:15188680-15188699 None:intergenic 30.0%
AGATAGCAATAGATTCTCAA+TGG + chr7.2:15189028-15189047 None:intergenic 30.0%
AGTTTCATCATTAGACTTCA+AGG + chr7.2:15189268-15189287 None:intergenic 30.0%
ATATACATATTGACCATCAC+TGG - chr7.2:15189881-15189900 MS.gene52735:CDS 30.0%
CATAAAAGCTCAAAAGTAGA+AGG + chr7.2:15188697-15188716 None:intergenic 30.0%
GTTGTTGGATACATATATGT+TGG - chr7.2:15188787-15188806 MS.gene52735:intron 30.0%
TATTAGAATCCCTGTGTTTA+TGG + chr7.2:15189212-15189231 None:intergenic 30.0%
TCATGTTCGAATGCAAAATA+TGG - chr7.2:15189057-15189076 MS.gene52735:intron 30.0%
TTCAGTGTAATTACAAGTGT+CGG - chr7.2:15188427-15188446 MS.gene52735:intron 30.0%
TTTACTAGAACAACGTGATT+AGG - chr7.2:15187185-15187204 MS.gene52735:CDS 30.0%
! AAGTATTTTGTGTCACCATA+TGG + chr7.2:15188247-15188266 None:intergenic 30.0%
! AGACTTTGATATAGCGTTTT+CGG - chr7.2:15188749-15188768 MS.gene52735:intron 30.0%
! ATATCAAATCTAGAGCGTAA+AGG + chr7.2:15187837-15187856 None:intergenic 30.0%
! CTTTTGAGCTTTTATGTGTA+TGG - chr7.2:15188701-15188720 MS.gene52735:intron 30.0%
! GCAATCAATATTTGTTGCAT+TGG - chr7.2:15189357-15189376 MS.gene52735:intron 30.0%
! TATCAAATCTAGAGCGTAAA+GGG + chr7.2:15187836-15187855 None:intergenic 30.0%
! TTCTTACCATCATCTTTTTC+GGG + chr7.2:15187303-15187322 None:intergenic 30.0%
!!! CAAAACTGGTTTTTAAGGTA+AGG - chr7.2:15187964-15187983 MS.gene52735:CDS 30.0%
AAAGGTTCAGAAGAACCAAA+TGG + chr7.2:15189519-15189538 None:intergenic 35.0%
AAATTCCTCCACATCTTATG+CGG - chr7.2:15188183-15188202 MS.gene52735:CDS 35.0%
AAGAACCAAATGGAATCACA+AGG + chr7.2:15189509-15189528 None:intergenic 35.0%
AAGAATCTTCTCCTTCACAT+TGG + chr7.2:15189948-15189967 None:intergenic 35.0%
AGAGAGAGAACAAGTTACAT+TGG - chr7.2:15189084-15189103 MS.gene52735:intron 35.0%
AGCAAAGAAAAGGATATAGG+AGG + chr7.2:15189573-15189592 None:intergenic 35.0%
AGGCCTATTTGCTTTACATT+TGG - chr7.2:15188610-15188629 MS.gene52735:intron 35.0%
ATGTAGCAATCAAGCACTTT+AGG + chr7.2:15187354-15187373 None:intergenic 35.0%
CTTCTCTTGGATGTTGTAAT+TGG + chr7.2:15190047-15190066 None:intergenic 35.0%
GAACAAGTTACATTGGAAAG+AGG - chr7.2:15189091-15189110 MS.gene52735:intron 35.0%
GATGAATAAGCTATGAAGCA+CGG - chr7.2:15188335-15188354 MS.gene52735:intron 35.0%
GGACTGACCATAAGAAAATT+TGG + chr7.2:15189235-15189254 None:intergenic 35.0%
GTTCTTCAAGAGAAAAGTGA+TGG - chr7.2:15189291-15189310 MS.gene52735:intron 35.0%
GTTGCAATTCAGTGTGATAA+TGG - chr7.2:15188916-15188935 MS.gene52735:intron 35.0%
TACTCAAAACCACAACACAA+CGG + chr7.2:15187774-15187793 None:intergenic 35.0%
TAGTGTGGTTATAACACCAA+GGG - chr7.2:15187792-15187811 MS.gene52735:CDS 35.0%
TATCGACAACGGTAAACTAA+TGG - chr7.2:15187874-15187893 MS.gene52735:CDS 35.0%
TCTTTATAAGGGTTGTTAGC+AGG + chr7.2:15188833-15188852 None:intergenic 35.0%
TGTAGCAATCAAGCACTTTA+GGG + chr7.2:15187353-15187372 None:intergenic 35.0%
TTCTAGGCAGTAGAAAAGAA+AGG - chr7.2:15188208-15188227 MS.gene52735:CDS 35.0%
TTGGATGTTGTAATTGGCAA+GGG + chr7.2:15190041-15190060 None:intergenic 35.0%
! ACTTTGATATAGCGTTTTCG+GGG - chr7.2:15188751-15188770 MS.gene52735:intron 35.0%
! AGGCTTTATCTCATACAATG+TGG - chr7.2:15188014-15188033 MS.gene52735:CDS 35.0%
! GACTTTGATATAGCGTTTTC+GGG - chr7.2:15188750-15188769 MS.gene52735:intron 35.0%
! GAGCGGATCTATTAAGTTTT+TGG - chr7.2:15187470-15187489 MS.gene52735:intron 35.0%
! GGCTTTATCTCATACAATGT+GGG - chr7.2:15188015-15188034 MS.gene52735:CDS 35.0%
! TACGCTCTAGATTTGATATC+TGG - chr7.2:15187838-15187857 MS.gene52735:CDS 35.0%
!! ATGCAAATTTCTAGCTCGAA+AGG + chr7.2:15189537-15189556 None:intergenic 35.0%
!!! AGTTATTTTAAGCCTCAGAG+AGG - chr7.2:15188583-15188602 MS.gene52735:intron 35.0%
AAATTCGTCCTCTGCATCAT+GGG - chr7.2:15190076-15190095 MS.gene52735:intron 40.0%
AAGTCTTCTCAGTCCGATTA+TGG - chr7.2:15189384-15189403 MS.gene52735:intron 40.0%
AGAAATTTGCATAACCCCCA+TGG - chr7.2:15189545-15189564 MS.gene52735:intron 40.0%
AGACTTCAAGGAGACAATGA+AGG + chr7.2:15189256-15189275 None:intergenic 40.0%
AGCATGTCAACCATAAACAC+AGG - chr7.2:15189199-15189218 MS.gene52735:intron 40.0%
ATAAGGGTTGTTAGCAGGTT+CGG + chr7.2:15188828-15188847 None:intergenic 40.0%
ATCAGACACTGCATATGCAT+TGG + chr7.2:15189986-15190005 None:intergenic 40.0%
ATGGATACGTACCTGAAAGA+CGG + chr7.2:15187400-15187419 None:intergenic 40.0%
CTACCTGCTATCCTAAACTT+AGG - chr7.2:15188953-15188972 MS.gene52735:intron 40.0%
CTGTATGTTTACTTAGGGAG+CGG - chr7.2:15187453-15187472 MS.gene52735:intron 40.0%
CTTGGATGTTGTAATTGGCA+AGG + chr7.2:15190042-15190061 None:intergenic 40.0%
GAAGGAGAAGATTCTTGACA+AGG - chr7.2:15189952-15189971 MS.gene52735:intron 40.0%
GAGTTCCTTGTGATTCCATT+TGG - chr7.2:15189501-15189520 MS.gene52735:intron 40.0%
GATGCAACAAAGTCACAATC+TGG + chr7.2:15189162-15189181 None:intergenic 40.0%
GCATGTCAACCATAAACACA+GGG - chr7.2:15189200-15189219 MS.gene52735:intron 40.0%
GGACACTTGTTCCTAAGTTT+AGG + chr7.2:15188967-15188986 None:intergenic 40.0%
GTAGTGTGGTTATAACACCA+AGG - chr7.2:15187791-15187810 MS.gene52735:CDS 40.0%
GTTGATCCCGAAAAAGATGA+TGG - chr7.2:15187294-15187313 MS.gene52735:CDS 40.0%
TAATCGGACTGAGAAGACTT+TGG + chr7.2:15189384-15189403 None:intergenic 40.0%
TAGGCAGTAGAAAAGAAAGG+AGG - chr7.2:15188211-15188230 MS.gene52735:CDS 40.0%
TATTGACCATCACTGGAAAG+AGG - chr7.2:15189888-15189907 MS.gene52735:CDS 40.0%
TCAGACACTGCATATGCATT+GGG + chr7.2:15189985-15190004 None:intergenic 40.0%
TGAAAGACGGGAATGCTTAA+GGG + chr7.2:15187387-15187406 None:intergenic 40.0%
TTCGCACACGACTGAAATTT+CGG + chr7.2:15189444-15189463 None:intergenic 40.0%
TTGGAAATCACCACAGGAAT+GGG + chr7.2:15187330-15187349 None:intergenic 40.0%
! ATTTGACGGTTGACTTCTCT+TGG + chr7.2:15190060-15190079 None:intergenic 40.0%
! GCTGTTATCTAGTTCCTTAC+CGG + chr7.2:15190014-15190033 None:intergenic 40.0%
! GTTCCTAAGTTTAGGATAGC+AGG + chr7.2:15188959-15188978 None:intergenic 40.0%
!! AAAGGATATAGGAGGTACCA+TGG + chr7.2:15189565-15189584 None:intergenic 40.0%
!! AAGGATATAGGAGGTACCAT+GGG + chr7.2:15189564-15189583 None:intergenic 40.0%
!! GTAATTACAAGTGTCGGTGT+CGG - chr7.2:15188433-15188452 MS.gene52735:intron 40.0%
!!! TCATCTTTTTCGGGATCAAC+AGG + chr7.2:15187294-15187313 None:intergenic 40.0%
!!! TGTTGTGGTTTTGAGTAGTG+TGG - chr7.2:15187777-15187796 MS.gene52735:CDS 40.0%
AATTCGTCCTCTGCATCATG+GGG - chr7.2:15190077-15190096 MS.gene52735:intron 45.0%
ACAAAGTCACAATCTGGCAG+AGG + chr7.2:15189156-15189175 None:intergenic 45.0%
ACGTTGCACTTGAGAGTCAT+GGG + chr7.2:15187745-15187764 None:intergenic 45.0%
AGACACGATAGCCAATGTGA+AGG - chr7.2:15189934-15189953 MS.gene52735:CDS 45.0%
ATGCAGTGTCTGATCTTTGC+CGG - chr7.2:15189992-15190011 MS.gene52735:intron 45.0%
CAAAGTCACAATCTGGCAGA+GGG + chr7.2:15189155-15189174 None:intergenic 45.0%
CAAATTCGTCCTCTGCATCA+TGG - chr7.2:15190075-15190094 MS.gene52735:intron 45.0%
CACATCTTATGCGGCTTTCT+AGG - chr7.2:15188192-15188211 MS.gene52735:CDS 45.0%
CGCGACTTAGTTATCGACAA+CGG - chr7.2:15187863-15187882 MS.gene52735:CDS 45.0%
CGTGTGCGAATAATGTGCAA+CGG - chr7.2:15189454-15189473 MS.gene52735:intron 45.0%
CTAATGCGCAATGAGCACTT+GGG + chr7.2:15188988-15189007 None:intergenic 45.0%
CTAGAAAGCCGCATAAGATG+TGG + chr7.2:15188194-15188213 None:intergenic 45.0%
CTGAAAGACGGGAATGCTTA+AGG + chr7.2:15187388-15187407 None:intergenic 45.0%
CTTAAGCATTCCCGTCTTTC+AGG - chr7.2:15187386-15187405 MS.gene52735:intron 45.0%
GATGCAGAGGACGAATTTGA+CGG + chr7.2:15190074-15190093 None:intergenic 45.0%
GTCTGAACTCTTAACCCTCA+GGG + chr7.2:15189918-15189937 None:intergenic 45.0%
GTGTCACCATATGGACAACT+TGG + chr7.2:15188238-15188257 None:intergenic 45.0%
GTTGGAAATCACCACAGGAA+TGG + chr7.2:15187331-15187350 None:intergenic 45.0%
TAAGAATAGCCCCATTCCTG+TGG - chr7.2:15187317-15187336 MS.gene52735:CDS 45.0%
TAAGCTATGAAGCACGGACA+TGG - chr7.2:15188341-15188360 MS.gene52735:intron 45.0%
TATGAAGCACGAACACTCCT+CGG + chr7.2:15188494-15188513 None:intergenic 45.0%
TGGAAATCACCACAGGAATG+GGG + chr7.2:15187329-15187348 None:intergenic 45.0%
TGGATACGTACCTGAAAGAC+GGG + chr7.2:15187399-15187418 None:intergenic 45.0%
TGTCTGAACTCTTAACCCTC+AGG + chr7.2:15189919-15189938 None:intergenic 45.0%
TTAGGGTTGGAAATCACCAC+AGG + chr7.2:15187336-15187355 None:intergenic 45.0%
! AGTCAAAAAGTGCACGTGCA+CGG - chr7.2:15187265-15187284 MS.gene52735:CDS 45.0%
! GGTTATAACACCAAGGGTGT+AGG - chr7.2:15187798-15187817 MS.gene52735:CDS 45.0%
! TGTTTAGAGTCCTACACCCT+TGG + chr7.2:15187811-15187830 None:intergenic 45.0%
!! AGGATATAGGAGGTACCATG+GGG + chr7.2:15189563-15189582 None:intergenic 45.0%
!! GCAATCAAGCACTTTAGGGT+TGG + chr7.2:15187349-15187368 None:intergenic 45.0%
!! CAAAAAATAAAAAAATAAAA+TGG + chr7.2:15187419-15187438 None:intergenic 5.0%
!! TGTAAAAAAAAAAAATAATA+AGG - chr7.2:15187678-15187697 MS.gene52735:CDS 5.0%
ATTCGTCCTCTGCATCATGG+GGG - chr7.2:15190078-15190097 MS.gene52735:intron 50.0%
CACGTTGCACTTGAGAGTCA+TGG + chr7.2:15187746-15187765 None:intergenic 50.0%
CGTGAAACTCCGTTGTGTTG+TGG - chr7.2:15187762-15187781 MS.gene52735:CDS 50.0%
GAAAGCCGCATAAGATGTGG+AGG + chr7.2:15188191-15188210 None:intergenic 50.0%
GCTAATGCGCAATGAGCACT+TGG + chr7.2:15188989-15189008 None:intergenic 50.0%
GGAGGACCAAGTTGTCCATA+TGG - chr7.2:15188229-15188248 MS.gene52735:CDS 50.0%
GTATAGCCACACCAAGCCAT+AGG - chr7.2:15187710-15187729 MS.gene52735:CDS 50.0%
GTGTCTGATCTTTGCCGGTA+AGG - chr7.2:15189997-15190016 MS.gene52735:intron 50.0%
TTAAGCCTCAGAGAGGCTTG+AGG - chr7.2:15188590-15188609 MS.gene52735:intron 50.0%
TTGCACTTGAGAGTCATGGG+CGG + chr7.2:15187742-15187761 None:intergenic 50.0%
! GTCAAAAAGTGCACGTGCAC+GGG - chr7.2:15187266-15187285 MS.gene52735:CDS 50.0%
!! ACCTATCCTATGGCTTGGTG+TGG + chr7.2:15187719-15187738 None:intergenic 50.0%
!! ATCCAACAACGGATTGCGTC+TGG + chr7.2:15188777-15188796 None:intergenic 50.0%
!! GGATATAGGAGGTACCATGG+GGG + chr7.2:15189562-15189581 None:intergenic 50.0%
ATAGGCCTCAAGCCTCTCTG+AGG + chr7.2:15188598-15188617 None:intergenic 55.0%
ATTAGGCGTGTCCCAGTGTC+GGG + chr7.2:15188471-15188490 None:intergenic 55.0%
GATTAGGCGTGTCCCAGTGT+CGG + chr7.2:15188472-15188491 None:intergenic 55.0%
GCACGAACACTCCTCGGATT+AGG + chr7.2:15188488-15188507 None:intergenic 55.0%
GCCACACCAAGCCATAGGAT+AGG - chr7.2:15187715-15187734 MS.gene52735:CDS 55.0%
GGCGATCCTCTTTCCAGTGA+TGG + chr7.2:15189897-15189916 None:intergenic 55.0%
TCATGGGCGGACCTATCCTA+TGG + chr7.2:15187729-15187748 None:intergenic 55.0%
TGAAGCACGGACATGGACAC+CGG - chr7.2:15188348-15188367 MS.gene52735:intron 55.0%
TGGAAAGAGGATCGCCCTGA+GGG - chr7.2:15189901-15189920 MS.gene52735:CDS 55.0%
ACACAACACGTGCCCGACAC+TGG - chr7.2:15188456-15188475 MS.gene52735:intron 60.0%
ACTGGGACACGCCTAATCCG+AGG - chr7.2:15188474-15188493 MS.gene52735:intron 60.0%
CACAACACGTGCCCGACACT+GGG - chr7.2:15188457-15188476 MS.gene52735:intron 60.0%
CATGGACACCGGACACGACA+CGG - chr7.2:15188359-15188378 MS.gene52735:intron 60.0%
CTGGAAAGAGGATCGCCCTG+AGG - chr7.2:15189900-15189919 MS.gene52735:CDS 60.0%
GGCCAGACGCAATCCGTTGT+TGG - chr7.2:15188772-15188791 MS.gene52735:intron 60.0%
GGCGGACCTATCCTATGGCT+TGG + chr7.2:15187724-15187743 None:intergenic 60.0%
GTCAGTGTCCGTGTCGTGTC+CGG + chr7.2:15188370-15188389 None:intergenic 60.0%
TCTGGCAGAGGGCAGTAGCA+CGG + chr7.2:15189144-15189163 None:intergenic 60.0%
GAGGGCAGTAGCACGGCTCA+TGG + chr7.2:15189137-15189156 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 15187122 15190105 15187122 ID=MS.gene52735
chr7.2 mRNA 15187122 15190105 15187122 ID=MS.gene52735.t1;Parent=MS.gene52735
chr7.2 exon 15190088 15190105 15190088 ID=MS.gene52735.t1.exon1;Parent=MS.gene52735.t1
chr7.2 CDS 15190088 15190105 15190088 ID=cds.MS.gene52735.t1;Parent=MS.gene52735.t1
chr7.2 exon 15189820 15189960 15189820 ID=MS.gene52735.t1.exon2;Parent=MS.gene52735.t1
chr7.2 CDS 15189820 15189960 15189820 ID=cds.MS.gene52735.t1;Parent=MS.gene52735.t1
chr7.2 exon 15187661 15188299 15187661 ID=MS.gene52735.t1.exon3;Parent=MS.gene52735.t1
chr7.2 CDS 15187661 15188299 15187661 ID=cds.MS.gene52735.t1;Parent=MS.gene52735.t1
chr7.2 exon 15187122 15187352 15187122 ID=MS.gene52735.t1.exon4;Parent=MS.gene52735.t1
chr7.2 CDS 15187122 15187352 15187122 ID=cds.MS.gene52735.t1;Parent=MS.gene52735.t1
Gene Sequence

>MS.gene52735

ATGCTTCGTTGTTTTTTTGTGAGTGTTTTGCTAAATGTAATTTTTAACAGCTTCATATTTTCGTTTACTAGAACAACGTGATTAGGCTTAAGTCAAAAACTTGATTTTGATTATATGTTACTACTTATTTGTAATCACTGTTTAGTCAAAAAGTGCACGTGCACGGGAGCCTGTTGATCCCGAAAAAGATGATGGTAAGAATAGCCCCATTCCTGTGGTGATTTCCAACCCTAAAGTGCTTGATTGCTACATTTGTTTTCAACCCTTAAGCATTCCCGTCTTTCAGGTACGTATCCATTTTATTTTTTTATTTTTTGTTCACTCTTTTCTACTGTATGTTTACTTAGGGAGCGGATCTATTAAGTTTTTGGTGTGACTAAAATAATATTGTAAATTTTTTTTTTAAGACTATGTACTATTTCACCTAAAATAATAGTTTTAGTAGTTTTATGTAGGCTAGTTTTATTAGTTCAAATACATACCACAATTATTAATTGAAACAAAATAAACAACCAACTTCCTCTAATATTTCATTTTTAAAGACATCTTTCATATATGTAAAAAAAAAAAATAATAAGGAAAATTTTGGTATAGCCACACCAAGCCATAGGATAGGTCCGCCCATGACTCTCAAGTGCAACGTGAAACTCCGTTGTGTTGTGGTTTTGAGTAGTGTGGTTATAACACCAAGGGTGTAGGACTCTAAACACGCCCTTTACGCTCTAGATTTGATATCTGGAGCGCGACTTAGTTATCGACAACGGTAAACTAATGGTATGTAGTTCAACAGATTTTAGATAGACTTTGATATTATCTTTTAGGTTGAATGTAATTCAAACTTACAAAACTGGTTTTTAAGGTAAGGAATATCCTTGCTTATAGACTCATATTTAGGCTTTATCTCATACAATGTGGGAGTCTTAACAAGTATTTCACTTTAGAGGGTAAAGTAATTAATATCAACCATTTATTAGAAAATTAAGGATGAATATTAGAGGTACTTCGTTGCAATCAAGAGTTTATAATTTAATGATACTTAATTTTCTCACTTTAGAAGAGGCAAATTCCTCCACATCTTATGCGGCTTTCTAGGCAGTAGAAAAGAAAGGAGGACCAAGTTGTCCATATGGTGACACAAAATACTTAGACAAAAAAGGAGAAAGATGCATAACAAATTATGTCTAGTAGTGAAGAGAGTGAGCATGATGATGACGATGAATAAGCTATGAAGCACGGACATGGACACCGGACACGACACGGACACTGACACGCCGACACAGCTAATAATTTGAAAAAATAACATAATTCAGTGTAATTACAAGTGTCGGTGTCGGACACAACACGTGCCCGACACTGGGACACGCCTAATCCGAGGAGTGTTCGTGCTTCATAGTGAATAAGTGATTAGAGATAGTGATTCTATTTAAGGAATCACTTTTATTTATTTTAATTTCTTCAATGAGTTATTTTAAGCCTCAGAGAGGCTTGAGGCCTATTTGCTTTACATTTGGTTTGAATATCAGTAACAATGAACTTTGAATAATAATTATGAATGCCTACAGTTTTATACATCCTTCTACTTTTGAGCTTTTATGTGTATGGTATTAACATCTTGTATTGTTTCCCTAGACTTTGATATAGCGTTTTCGGGGCCAGACGCAATCCGTTGTTGGATACATATATGTTGGTTATACTTTTGATTGCCGAACCTGCTAACAACCCTTATAAAGAATTCTCTTATTTTATTTTGTTTTAGCAAGTGGTTCAAAGTCTAATTTGATGATTTTCTTTTTTGTTGCAATTCAGTGTGATAATGGTCATATTGCTTGCTCTACCTGCTATCCTAAACTTAGGAACAAGTGTCCCAAGTGCTCATTGCGCATTAGCTCAAAACGTTGTAAAGCCATTGAGAATCTATTGCTATCTATTGAATTGTCATGTTCGAATGCAAAATATGGTTGCAGAGAGAGAACAAGTTACATTGGAAAGAGGAATCATGAAGAACAATGCATCCATGAGCCGTGCTACTGCCCTCTGCCAGATTGTGACTTTGTTGCATCATCAGAAGTGTTGTCTAAGCATGTCAACCATAAACACAGGGATTCTAATACCAAATTTTCTTATGGTCAGTCCTTCATTGTCTCCTTGAAGTCTAATGATGAAACTATTGTTCTTCAAGAGAAAAGTGATGGCAAACTATTTATTCTCAATAATAGTACTATGCTTTTTGGAAATGCAATCAATATTTGTTGCATTGGTCCAAAGTCTTCTCAGTCCGATTATGGTTATGATATATTGGCTAGATCTCAAGCATGCAAACCGAAATTTCAGTCGTGTGCGAATAATGTGCAACGGTTTACTTTATCAACTCTTTCATTAGAGTTCCTTGTGATTCCATTTGGTTCTTCTGAACCTTTCGAGCTAGAAATTTGCATAACCCCCATGGTACCTCCTATATCCTTTTCTTTGCTTGTTTTTTTTTCCTATCAAAATCTTATTATTTTTTTTGTTTTGAATTTATACTCTAGCATTTAATCTCAAATTCATCAGTTTTTCAAATGCCAAAAAAAGAATGTTACTGTTTTTCTATTTTTTGGATTAGTTCTTGAAATATCAGTCTCAACTCAAATTTTATTTTATTGATTTGATCATGAATTTCTTTTCCCTGTTGTGCTGTAATAAATTTTGCAATGGATTTTGTTTTCTTTCTGTTGCTTTTATCATTGATTAATGTGTTGGCAAATGTCTTGCAGATGCTAATATACATATTGACCATCACTGGAAAGAGGATCGCCCTGAGGGTTAAGAGTTCAGACACGATAGCCAATGTGAAGGAGAAGATTCTTGACAAGGAAGAGATCCCAATGCATATGCAGTGTCTGATCTTTGCCGGTAAGGAACTAGATAACAGCTTGACCCTTGCCAATTACAACATCCAAGAGAAGTCAACCGTCAAATTCGTCCTCTGCATCATGGGGGATTAG

Protein sequence

>MS.gene52735.t1

MLRCFFSKSARAREPVDPEKDDGKNSPIPVVISNPKVLDCYICFQPLSIPVFQCDNGHIACSTCYPKLRNKCPKCSLRISSKRCKAIENLLLSIELSCSNAKYGCRERTSYIGKRNHEEQCIHEPCYCPLPDCDFVASSEVLSKHVNHKHRDSNTKFSYGQSFIVSLKSNDETIVLQEKSDGKLFILNNSTMLFGNAINICCIGPKSSQSDYGYDILARSQACKPKFQSCANNVQRFTLSTLSLEFLVIPFGSSEPFELEICITPMMLIYILTITGKRIALRVKSSDTIANVKEKILDKEEIPMHMQCLIFAGKELDNSLTLANYNIQEKSTVKFVLCIMGD