AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72920.t1 MTR_7g094390 90.179 336 33 0 7 342 142 477 0.0 617
MS.gene72920.t1 MTR_7g024290 71.111 315 90 1 29 342 3 317 3.49e-160 451
MS.gene72920.t1 MTR_5g067400 69.649 313 95 0 29 341 3 315 1.47e-158 446
MS.gene72920.t1 MTR_1g046640 68.153 314 99 1 29 342 3 315 2.34e-153 433
MS.gene72920.t1 MTR_1g046650 68.051 313 99 1 30 342 4 315 2.18e-152 431
MS.gene72920.t1 MTR_1g046650 68.051 313 99 1 30 342 35 346 4.44e-152 431
MS.gene72920.t1 MTR_2g038430 63.343 341 112 2 15 342 3 343 1.51e-149 425
MS.gene72920.t1 MTR_5g076720 63.939 330 116 1 16 342 61 390 2.16e-148 424
MS.gene72920.t1 MTR_1g046650 68.729 291 90 1 52 342 26 315 6.15e-141 402
MS.gene72920.t1 MTR_5g076520 66.250 320 102 3 29 342 3 322 2.45e-140 400
MS.gene72920.t1 MTR_5g076660 63.609 327 116 1 16 339 12 338 3.01e-140 401
MS.gene72920.t1 MTR_5g076370 62.500 328 119 2 16 339 12 339 7.19e-139 397
MS.gene72920.t1 MTR_5g076810 72.761 268 72 1 75 341 2 269 1.35e-138 394
MS.gene72920.t1 MTR_2g038420 61.261 333 124 2 15 342 3 335 1.95e-138 396
MS.gene72920.t1 MTR_5g061290 62.154 325 115 3 24 342 5 327 1.61e-137 394
MS.gene72920.t1 MTR_5g076505 65.529 293 98 1 53 342 23 315 6.95e-134 384
MS.gene72920.t1 MTR_5g076820 66.426 277 85 5 29 300 12 285 1.64e-120 349
MS.gene72920.t1 MTR_1g046650 66.802 247 81 1 96 342 1 246 6.42e-115 333
MS.gene72920.t1 MTR_5g076540 71.111 225 65 0 30 254 4 228 5.18e-108 315
MS.gene72920.t1 MTR_5g077020 58.586 198 69 4 79 267 17 210 4.94e-70 218
MS.gene72920.t1 MTR_4g094468 44.770 239 127 3 28 263 88 324 3.33e-66 212
MS.gene72920.t1 MTR_4g058025 71.304 115 32 1 107 220 14 128 9.79e-51 167
MS.gene72920.t1 MTR_5g061310 64.935 77 27 0 266 342 1 77 8.56e-26 99.0
MS.gene72920.t1 MTR_7g085590 29.630 189 122 2 30 218 56 233 1.12e-23 99.4
MS.gene72920.t1 MTR_7g105080 60.000 75 30 0 267 341 1 75 1.62e-22 91.7
MS.gene72920.t1 MTR_3g092130 60.000 75 30 0 267 341 1 75 1.62e-22 91.7
MS.gene72920.t1 MTR_1g059690 60.000 75 30 0 267 341 1 75 1.62e-22 91.7
MS.gene72920.t1 MTR_5g033960 60.000 75 30 0 267 341 1 75 1.69e-22 92.4
MS.gene72920.t1 MTR_8g088060 60.000 75 30 0 267 341 1 75 1.75e-22 92.4
MS.gene72920.t1 MTR_5g092700 60.000 75 30 0 267 341 1 75 2.28e-22 92.0
MS.gene72920.t1 MTR_5g092700 40.541 74 44 0 268 341 78 151 1.56e-11 62.0
MS.gene72920.t1 MTR_4g073580 60.000 75 30 0 267 341 1 75 2.28e-22 92.0
MS.gene72920.t1 MTR_4g073580 40.541 74 44 0 268 341 78 151 1.56e-11 62.0
MS.gene72920.t1 MTR_3g092130 60.000 75 30 0 267 341 1 75 3.93e-22 91.3
MS.gene72920.t1 MTR_3g017590 28.191 188 112 5 6 174 7 190 5.82e-22 94.7
MS.gene72920.t1 MTR_1g066390 55.294 85 38 0 257 341 67 151 7.45e-22 92.8
MS.gene72920.t1 MTR_1g066390 55.294 85 38 0 257 341 143 227 7.45e-22 92.8
MS.gene72920.t1 MTR_1g066390 60.000 75 30 0 267 341 1 75 1.08e-21 92.4
MS.gene72920.t1 MTR_4g088485 55.294 85 38 0 257 341 128 212 7.65e-22 92.4
MS.gene72920.t1 MTR_4g088485 60.000 75 30 0 267 341 1 75 1.11e-21 92.0
MS.gene72920.t1 MTR_4g088485 42.353 85 34 1 257 341 67 136 7.54e-12 64.3
MS.gene72920.t1 MTR_4g073580 60.000 75 30 0 267 341 1 75 7.71e-22 91.7
MS.gene72920.t1 MTR_7g116360 55.294 85 38 0 257 341 67 151 9.20e-22 92.4
MS.gene72920.t1 MTR_7g116360 55.294 85 38 0 257 341 143 227 9.20e-22 92.4
MS.gene72920.t1 MTR_7g116360 60.000 75 30 0 267 341 1 75 1.30e-21 92.0
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 67 151 2.49e-21 92.4
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 143 227 2.49e-21 92.4
MS.gene72920.t1 MTR_8g018230 60.000 75 30 0 267 341 1 75 3.61e-21 92.0
MS.gene72920.t1 MTR_7g116360 55.294 85 38 0 257 341 115 199 2.59e-21 92.4
MS.gene72920.t1 MTR_7g116360 55.294 85 38 0 257 341 191 275 2.59e-21 92.4
MS.gene72920.t1 MTR_7g116360 60.000 75 30 0 267 341 49 123 4.67e-21 91.7
MS.gene72920.t1 MTR_6g061930 55.294 85 38 0 257 341 67 151 3.02e-21 92.4
MS.gene72920.t1 MTR_6g061930 55.294 85 38 0 257 341 204 288 3.02e-21 92.4
MS.gene72920.t1 MTR_6g061930 60.000 75 30 0 267 341 1 75 4.40e-21 92.0
MS.gene72920.t1 MTR_4g081010 55.294 85 38 0 257 341 67 151 3.40e-21 92.4
MS.gene72920.t1 MTR_4g081010 55.294 85 38 0 257 341 143 227 3.40e-21 92.4
MS.gene72920.t1 MTR_4g081010 55.294 85 38 0 257 341 219 303 3.40e-21 92.4
MS.gene72920.t1 MTR_4g081010 60.000 75 30 0 267 341 1 75 4.66e-21 92.0
MS.gene72920.t1 MTR_4g080920 54.118 85 39 0 257 341 67 151 4.28e-21 90.9
MS.gene72920.t1 MTR_4g080920 58.667 75 31 0 267 341 1 75 1.31e-20 89.4
MS.gene72920.t1 MTR_4g080920 45.882 85 46 0 257 341 143 227 9.01e-16 75.9
MS.gene72920.t1 MTR_4g081010 55.294 85 38 0 257 341 67 151 5.69e-21 91.7
MS.gene72920.t1 MTR_4g081010 55.294 85 38 0 257 341 143 227 5.69e-21 91.7
MS.gene72920.t1 MTR_4g081010 60.000 75 30 0 267 341 1 75 7.08e-21 91.3
MS.gene72920.t1 MTR_4g091580 55.294 85 38 0 257 341 67 151 7.95e-21 92.8
MS.gene72920.t1 MTR_4g091580 55.294 85 38 0 257 341 143 227 7.95e-21 92.8
MS.gene72920.t1 MTR_4g091580 55.294 85 38 0 257 341 295 379 7.95e-21 92.8
MS.gene72920.t1 MTR_4g091580 60.000 75 30 0 267 341 1 75 1.06e-20 92.4
MS.gene72920.t1 MTR_4g091580 54.118 85 39 0 257 341 219 303 2.66e-20 91.3
MS.gene72920.t1 MTR_4g081010 55.294 85 38 0 257 341 67 151 8.19e-21 92.8
MS.gene72920.t1 MTR_4g081010 55.294 85 38 0 257 341 143 227 8.19e-21 92.8
MS.gene72920.t1 MTR_4g081010 55.294 85 38 0 257 341 219 303 8.19e-21 92.8
MS.gene72920.t1 MTR_4g081010 55.294 85 38 0 257 341 295 379 8.19e-21 92.8
MS.gene72920.t1 MTR_4g081010 60.000 75 30 0 267 341 1 75 1.12e-20 92.4
MS.gene72920.t1 MTR_4g080797 55.294 85 38 0 257 341 67 151 8.27e-21 92.4
MS.gene72920.t1 MTR_4g080797 55.294 85 38 0 257 341 143 227 8.27e-21 92.4
MS.gene72920.t1 MTR_4g080797 55.294 85 38 0 257 341 219 303 8.27e-21 92.4
MS.gene72920.t1 MTR_4g080797 55.294 85 38 0 257 341 295 379 8.27e-21 92.4
MS.gene72920.t1 MTR_4g080797 60.000 75 30 0 267 341 1 75 1.11e-20 92.4
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 67 151 8.27e-21 92.4
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 143 227 8.27e-21 92.4
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 219 303 8.27e-21 92.4
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 295 379 8.27e-21 92.4
MS.gene72920.t1 MTR_8g018230 60.000 75 30 0 267 341 1 75 1.11e-20 92.4
MS.gene72920.t1 MTR_8g081020 55.294 85 38 0 257 341 67 151 8.43e-21 92.4
MS.gene72920.t1 MTR_8g081020 55.294 85 38 0 257 341 143 227 8.43e-21 92.4
MS.gene72920.t1 MTR_8g081020 55.294 85 38 0 257 341 219 303 8.43e-21 92.4
MS.gene72920.t1 MTR_8g081020 55.294 85 38 0 257 341 295 379 8.43e-21 92.4
MS.gene72920.t1 MTR_8g081020 60.000 75 30 0 267 341 1 75 1.13e-20 92.0
MS.gene72920.t1 MTR_4g091580 55.294 85 38 0 257 341 295 379 8.48e-21 93.6
MS.gene72920.t1 MTR_4g091580 55.294 85 38 0 257 341 67 151 1.97e-20 92.4
MS.gene72920.t1 MTR_4g091580 55.294 85 38 0 257 341 143 227 1.97e-20 92.4
MS.gene72920.t1 MTR_4g091580 55.294 85 38 0 257 341 219 303 1.97e-20 92.4
MS.gene72920.t1 MTR_4g091580 55.294 85 38 0 257 341 371 455 1.97e-20 92.4
MS.gene72920.t1 MTR_4g091580 55.294 85 38 0 257 341 447 531 1.97e-20 92.4
MS.gene72920.t1 MTR_4g091580 60.000 75 30 0 267 341 1 75 2.55e-20 92.0
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 67 151 1.39e-20 92.8
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 143 227 1.39e-20 92.8
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 219 303 1.39e-20 92.8
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 295 379 1.39e-20 92.8
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 371 455 1.39e-20 92.8
MS.gene72920.t1 MTR_8g018230 60.000 75 30 0 267 341 1 75 1.85e-20 92.4
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 67 151 1.39e-20 92.8
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 143 227 1.39e-20 92.8
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 219 303 1.39e-20 92.8
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 295 379 1.39e-20 92.8
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 371 455 1.39e-20 92.8
MS.gene72920.t1 MTR_8g018230 60.000 75 30 0 267 341 1 75 1.85e-20 92.4
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 67 151 1.77e-20 92.8
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 143 227 1.77e-20 92.8
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 219 303 1.77e-20 92.8
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 295 379 1.77e-20 92.8
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 371 455 1.77e-20 92.8
MS.gene72920.t1 MTR_8g018230 55.294 85 38 0 257 341 447 531 1.77e-20 92.8
MS.gene72920.t1 MTR_8g018230 60.000 75 30 0 267 341 1 75 2.33e-20 92.4
MS.gene72920.t1 MTR_4g081010 55.294 85 38 0 257 341 67 151 1.84e-20 92.4
MS.gene72920.t1 MTR_4g081010 55.294 85 38 0 257 341 143 227 1.84e-20 92.4
MS.gene72920.t1 MTR_4g081010 55.294 85 38 0 257 341 219 303 1.84e-20 92.4
MS.gene72920.t1 MTR_4g081010 55.294 85 38 0 257 341 295 379 1.84e-20 92.4
MS.gene72920.t1 MTR_4g081010 55.294 85 38 0 257 341 371 455 1.84e-20 92.4
MS.gene72920.t1 MTR_4g081010 55.294 85 38 0 257 341 447 531 1.84e-20 92.4
MS.gene72920.t1 MTR_4g081010 60.000 75 30 0 267 341 1 75 2.41e-20 92.4
MS.gene72920.t1 MTR_4g088495 55.294 85 38 0 257 341 67 151 2.39e-20 92.8
MS.gene72920.t1 MTR_4g088495 55.294 85 38 0 257 341 143 227 2.39e-20 92.8
MS.gene72920.t1 MTR_4g088495 55.294 85 38 0 257 341 219 303 2.39e-20 92.8
MS.gene72920.t1 MTR_4g088495 55.294 85 38 0 257 341 295 379 2.39e-20 92.8
MS.gene72920.t1 MTR_4g088495 55.294 85 38 0 257 341 371 455 2.39e-20 92.8
MS.gene72920.t1 MTR_4g088495 55.294 85 38 0 257 341 447 531 2.39e-20 92.8
MS.gene72920.t1 MTR_4g088495 55.294 85 38 0 257 341 523 607 2.39e-20 92.8
MS.gene72920.t1 MTR_4g088495 55.294 85 38 0 257 341 599 683 2.39e-20 92.8
MS.gene72920.t1 MTR_4g088495 55.294 85 38 0 257 341 675 759 2.39e-20 92.8
MS.gene72920.t1 MTR_4g088495 55.294 85 38 0 257 341 751 835 2.39e-20 92.8
MS.gene72920.t1 MTR_4g088495 60.000 75 30 0 267 341 1 75 4.53e-20 91.7
MS.gene72920.t1 MTR_8g038370 25.896 251 159 8 11 235 71 320 2.78e-20 90.9
MS.gene72920.t1 MTR_4g009980 53.731 67 31 0 276 342 5 71 5.96e-20 83.2
MS.gene72920.t1 MTR_8g027520 30.857 175 115 4 29 197 36 210 6.75e-19 86.3
MS.gene72920.t1 MTR_8g027520 30.857 175 115 4 29 197 45 219 6.98e-19 86.3
MS.gene72920.t1 MTR_5g076740 58.228 79 30 2 267 342 86 164 2.59e-18 81.3
MS.gene72920.t1 MTR_3g091510 31.944 144 95 2 26 166 49 192 3.12e-18 84.3
MS.gene72920.t1 MTR_8g479250 55.294 85 38 0 257 341 131 215 7.25e-18 83.2
MS.gene72920.t1 MTR_5g076350 51.899 79 38 0 264 342 6 84 9.08e-18 77.4
MS.gene72920.t1 MTR_1g008120 31.724 145 96 2 25 166 56 200 1.47e-17 82.8
MS.gene72920.t1 MTR_7g117415 31.206 141 94 2 29 166 53 193 2.76e-17 81.6
MS.gene72920.t1 MTR_1g054335 29.341 167 112 3 37 197 58 224 3.46e-17 81.3
MS.gene72920.t1 MTR_5g076340 53.846 78 34 2 267 342 9 86 4.50e-16 72.8
MS.gene72920.t1 MTR_7g093600 30.534 131 88 2 37 164 59 189 6.08e-16 77.8
MS.gene72920.t1 MTR_5g076760 61.404 57 22 0 277 333 5 61 1.84e-14 68.2
MS.gene72920.t1 MTR_5g076780 55.357 56 25 0 281 336 4 59 3.65e-12 61.6
MS.gene72920.t1 MTR_7g085080 57.143 56 24 0 266 321 8 63 4.34e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72920.t1 AT5G37930 37.083 240 143 3 30 263 103 340 3.87e-49 168
MS.gene72920.t1 AT5G37890 32.773 238 154 4 17 250 30 265 1.33e-38 139
MS.gene72920.t1 AT5G37870 35.468 203 125 4 21 217 23 225 1.38e-38 139
MS.gene72920.t1 AT1G66620 30.970 268 173 5 7 263 8 274 1.89e-36 134
MS.gene72920.t1 AT1G66630 34.234 222 139 4 37 251 46 267 2.37e-36 133
MS.gene72920.t1 AT1G66650 35.829 187 114 3 25 205 71 257 2.71e-33 126
MS.gene72920.t1 AT5G62800 36.517 178 108 3 37 209 40 217 1.14e-30 118
MS.gene72920.t1 AT5G62800 36.517 178 108 3 37 209 40 217 1.26e-30 119
MS.gene72920.t1 AT5G37910 29.752 242 162 5 30 263 28 269 1.40e-29 114
MS.gene72920.t1 AT1G66660 32.804 189 119 3 19 200 85 272 2.19e-27 110
MS.gene72920.t1 AT4G05050 55.294 85 38 0 257 341 67 151 1.46e-22 92.8
MS.gene72920.t1 AT4G05050 60.000 75 30 0 267 341 1 75 2.18e-22 92.0
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 67 151 1.46e-22 92.8
MS.gene72920.t1 AT4G05320 60.000 75 30 0 267 341 1 75 2.18e-22 92.0
MS.gene72920.t1 AT2G47110 60.000 75 30 0 267 341 1 75 1.57e-22 92.8
MS.gene72920.t1 AT2G47110 60.000 75 30 0 267 341 1 75 1.57e-22 92.8
MS.gene72920.t1 AT1G23410 60.000 75 30 0 267 341 1 75 1.73e-22 92.4
MS.gene72920.t1 AT3G62250 60.000 75 30 0 267 341 1 75 2.03e-22 92.4
MS.gene72920.t1 AT3G52590 60.000 75 30 0 267 341 1 75 2.56e-22 91.3
MS.gene72920.t1 AT2G36170 60.000 75 30 0 267 341 1 75 2.56e-22 91.3
MS.gene72920.t1 AT2G35635 60.000 75 30 0 267 341 1 75 2.75e-22 92.0
MS.gene72920.t1 AT1G31340 60.000 75 30 0 267 341 1 75 3.34e-22 91.7
MS.gene72920.t1 AT1G31340 40.541 74 44 0 268 341 78 151 1.17e-11 62.8
MS.gene72920.t1 AT1G66610 25.887 282 141 7 37 250 53 334 5.21e-22 95.9
MS.gene72920.t1 AT4G05050 55.294 85 38 0 257 341 67 151 9.64e-22 92.4
MS.gene72920.t1 AT4G05050 55.294 85 38 0 257 341 143 227 9.64e-22 92.4
MS.gene72920.t1 AT4G05050 60.000 75 30 0 267 341 1 75 1.36e-21 92.0
MS.gene72920.t1 AT4G05050 55.294 85 38 0 257 341 67 151 9.64e-22 92.4
MS.gene72920.t1 AT4G05050 55.294 85 38 0 257 341 143 227 9.64e-22 92.4
MS.gene72920.t1 AT4G05050 60.000 75 30 0 267 341 1 75 1.36e-21 92.0
MS.gene72920.t1 AT4G05050 55.294 85 38 0 257 341 67 151 9.64e-22 92.4
MS.gene72920.t1 AT4G05050 55.294 85 38 0 257 341 143 227 9.64e-22 92.4
MS.gene72920.t1 AT4G05050 60.000 75 30 0 267 341 1 75 1.36e-21 92.0
MS.gene72920.t1 AT4G02890 55.294 85 38 0 257 341 67 151 9.64e-22 92.4
MS.gene72920.t1 AT4G02890 55.294 85 38 0 257 341 143 227 9.64e-22 92.4
MS.gene72920.t1 AT4G02890 60.000 75 30 0 267 341 1 75 1.36e-21 92.0
MS.gene72920.t1 AT4G02890 55.294 85 38 0 257 341 67 151 9.64e-22 92.4
MS.gene72920.t1 AT4G02890 55.294 85 38 0 257 341 143 227 9.64e-22 92.4
MS.gene72920.t1 AT4G02890 60.000 75 30 0 267 341 1 75 1.36e-21 92.0
MS.gene72920.t1 AT5G37640 55.294 85 38 0 257 341 69 153 1.22e-21 94.4
MS.gene72920.t1 AT5G37640 52.941 85 40 0 257 341 145 229 1.70e-18 85.5
MS.gene72920.t1 AT5G37640 57.895 76 31 1 267 341 231 306 9.35e-18 83.2
MS.gene72920.t1 AT5G37640 54.667 75 34 0 267 341 3 77 2.42e-15 76.3
MS.gene72920.t1 AT5G03240 55.294 85 38 0 257 341 67 151 3.33e-21 92.8
MS.gene72920.t1 AT5G03240 55.294 85 38 0 257 341 143 227 3.33e-21 92.8
MS.gene72920.t1 AT5G03240 55.294 85 38 0 257 341 219 303 3.33e-21 92.8
MS.gene72920.t1 AT5G03240 60.000 75 30 0 267 341 1 75 4.58e-21 92.4
MS.gene72920.t1 AT5G03240 55.294 85 38 0 257 341 67 151 3.33e-21 92.8
MS.gene72920.t1 AT5G03240 55.294 85 38 0 257 341 143 227 3.33e-21 92.8
MS.gene72920.t1 AT5G03240 55.294 85 38 0 257 341 219 303 3.33e-21 92.8
MS.gene72920.t1 AT5G03240 60.000 75 30 0 267 341 1 75 4.58e-21 92.4
MS.gene72920.t1 AT5G03240 55.294 85 38 0 257 341 67 151 3.33e-21 92.8
MS.gene72920.t1 AT5G03240 55.294 85 38 0 257 341 143 227 3.33e-21 92.8
MS.gene72920.t1 AT5G03240 55.294 85 38 0 257 341 219 303 3.33e-21 92.8
MS.gene72920.t1 AT5G03240 60.000 75 30 0 267 341 1 75 4.58e-21 92.4
MS.gene72920.t1 AT5G20620 55.294 85 38 0 257 341 67 151 3.33e-21 92.8
MS.gene72920.t1 AT5G20620 55.294 85 38 0 257 341 143 227 3.33e-21 92.8
MS.gene72920.t1 AT5G20620 55.294 85 38 0 257 341 219 303 3.33e-21 92.8
MS.gene72920.t1 AT5G20620 60.000 75 30 0 267 341 1 75 4.58e-21 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 67 151 3.49e-21 92.8
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 143 227 3.49e-21 92.8
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 219 303 3.49e-21 92.8
MS.gene72920.t1 AT4G05320 60.000 75 30 0 267 341 1 75 4.79e-21 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 67 151 3.49e-21 92.8
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 143 227 3.49e-21 92.8
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 219 303 3.49e-21 92.8
MS.gene72920.t1 AT4G05320 60.000 75 30 0 267 341 1 75 4.79e-21 92.4
MS.gene72920.t1 AT4G02890 55.294 85 38 0 257 341 67 151 3.49e-21 92.8
MS.gene72920.t1 AT4G02890 55.294 85 38 0 257 341 143 227 3.49e-21 92.8
MS.gene72920.t1 AT4G02890 55.294 85 38 0 257 341 219 303 3.49e-21 92.8
MS.gene72920.t1 AT4G02890 60.000 75 30 0 267 341 1 75 4.79e-21 92.4
MS.gene72920.t1 AT4G02890 55.294 85 38 0 257 341 67 151 3.49e-21 92.8
MS.gene72920.t1 AT4G02890 55.294 85 38 0 257 341 143 227 3.49e-21 92.8
MS.gene72920.t1 AT4G02890 55.294 85 38 0 257 341 219 303 3.49e-21 92.8
MS.gene72920.t1 AT4G02890 60.000 75 30 0 267 341 1 75 4.79e-21 92.4
MS.gene72920.t1 AT1G65350 55.294 85 38 0 257 341 142 226 3.81e-21 92.8
MS.gene72920.t1 AT1G65350 60.000 75 30 0 267 341 1 75 5.44e-21 92.4
MS.gene72920.t1 AT1G65350 54.118 85 38 1 257 341 67 150 2.22e-18 85.1
MS.gene72920.t1 AT1G65350 45.455 99 40 1 257 341 218 316 1.31e-15 77.0
MS.gene72920.t1 AT1G55060 58.667 75 31 0 267 341 77 151 4.13e-21 90.9
MS.gene72920.t1 AT1G55060 52.941 85 40 0 257 341 143 227 1.45e-19 86.7
MS.gene72920.t1 AT1G55060 54.667 75 34 0 267 341 1 75 1.88e-17 80.9
MS.gene72920.t1 AT5G20620 55.294 85 38 0 257 341 67 151 8.49e-21 92.8
MS.gene72920.t1 AT5G20620 55.294 85 38 0 257 341 143 227 8.49e-21 92.8
MS.gene72920.t1 AT5G20620 55.294 85 38 0 257 341 219 303 8.49e-21 92.8
MS.gene72920.t1 AT5G20620 55.294 85 38 0 257 341 295 379 8.49e-21 92.8
MS.gene72920.t1 AT5G20620 60.000 75 30 0 267 341 1 75 1.14e-20 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 67 151 8.66e-21 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 143 227 8.66e-21 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 219 303 8.66e-21 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 295 379 8.66e-21 92.4
MS.gene72920.t1 AT4G05320 60.000 75 30 0 267 341 1 75 1.16e-20 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 67 151 8.66e-21 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 143 227 8.66e-21 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 219 303 8.66e-21 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 295 379 8.66e-21 92.4
MS.gene72920.t1 AT4G05320 60.000 75 30 0 267 341 1 75 1.16e-20 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 67 151 8.66e-21 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 143 227 8.66e-21 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 219 303 8.66e-21 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 295 379 8.66e-21 92.4
MS.gene72920.t1 AT4G05320 60.000 75 30 0 267 341 1 75 1.16e-20 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 67 151 1.46e-20 92.8
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 143 227 1.46e-20 92.8
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 219 303 1.46e-20 92.8
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 295 379 1.46e-20 92.8
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 371 455 1.46e-20 92.8
MS.gene72920.t1 AT4G05320 60.000 75 30 0 267 341 1 75 1.94e-20 92.4
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 67 151 1.46e-20 92.8
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 143 227 1.46e-20 92.8
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 219 303 1.46e-20 92.8
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 295 379 1.46e-20 92.8
MS.gene72920.t1 AT4G05320 55.294 85 38 0 257 341 371 455 1.46e-20 92.8
MS.gene72920.t1 AT4G05320 60.000 75 30 0 267 341 1 75 1.94e-20 92.4
MS.gene72920.t1 AT3G09790 55.294 85 38 0 257 341 69 153 4.68e-19 88.6
MS.gene72920.t1 AT3G09790 57.534 73 31 0 269 341 5 77 4.37e-18 85.9
MS.gene72920.t1 AT3G09790 56.164 73 32 0 267 339 552 624 3.12e-15 77.0
MS.gene72920.t1 AT3G09790 56.061 66 29 0 273 338 249 314 4.68e-14 73.6
MS.gene72920.t1 AT3G09790 54.795 73 31 2 267 337 319 391 9.10e-13 69.7
MS.gene72920.t1 AT3G09790 43.299 97 46 3 253 342 143 237 2.69e-11 65.1
MS.gene72920.t1 AT3G09790 55.294 85 38 0 257 341 69 153 4.68e-19 88.6
MS.gene72920.t1 AT3G09790 57.534 73 31 0 269 341 5 77 4.37e-18 85.9
MS.gene72920.t1 AT3G09790 56.164 73 32 0 267 339 552 624 3.12e-15 77.0
MS.gene72920.t1 AT3G09790 56.061 66 29 0 273 338 249 314 4.68e-14 73.6
MS.gene72920.t1 AT3G09790 54.795 73 31 2 267 337 319 391 9.10e-13 69.7
MS.gene72920.t1 AT3G09790 43.299 97 46 3 253 342 143 237 2.69e-11 65.1
MS.gene72920.t1 AT1G53930 40.000 120 53 2 232 339 46 158 8.63e-19 82.4
MS.gene72920.t1 AT3G61790 30.986 142 95 2 28 166 51 192 3.57e-18 84.3
MS.gene72920.t1 AT4G27880 32.090 134 88 2 36 166 60 193 1.03e-16 80.1
MS.gene72920.t1 AT1G66610 41.584 101 55 3 7 103 124 224 2.44e-16 77.8
MS.gene72920.t1 AT1G66610 48.387 62 32 0 37 98 53 114 3.32e-12 65.9
MS.gene72920.t1 AT3G58040 29.104 134 92 2 36 166 56 189 1.04e-15 75.5
MS.gene72920.t1 AT3G58040 29.104 134 92 2 36 166 56 189 2.20e-15 76.3
MS.gene72920.t1 AT3G58040 29.104 134 92 2 36 166 56 189 2.20e-15 76.3
MS.gene72920.t1 AT2G41980 28.358 134 93 2 36 166 53 186 1.25e-14 73.9
MS.gene72920.t1 AT1G53950 44.444 72 40 0 266 337 68 139 4.48e-13 66.2
MS.gene72920.t1 AT1G11980 38.667 75 46 0 267 341 1 75 4.45e-12 61.6

Find 69 sgRNAs with CRISPR-Local

Find 195 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAAGCATTCCCGTCTTTC+AGG 0.148640 7.4:-14795805 MS.gene72920:intron
ATGTAGCAATCAAGCACTTT+AGG 0.201760 7.4:+14795840 None:intergenic
CTTCTCTTGGATGTTGTAAT+TGG 0.203344 7.4:+14792950 None:intergenic
TATTAGAATCCCTGTGTTTA+TGG 0.246961 7.4:+14793784 None:intergenic
GGACTGACCATAAGAAAATT+TGG 0.280534 7.4:+14793761 None:intergenic
TTCGCACACGACTGAAATTT+CGG 0.286992 7.4:+14793552 None:intergenic
TGTAGCAATCAAGCACTTTA+GGG 0.305109 7.4:+14795841 None:intergenic
TCATGTTCGAATGCAAAATA+TGG 0.330815 7.4:-14793936 MS.gene72920:CDS
GGACACTTGTTCCTAAGTTT+AGG 0.336322 7.4:+14794029 None:intergenic
TTGGAAATCACCACAGGAAT+GGG 0.365524 7.4:+14795864 None:intergenic
CTGAAAGACGGGAATGCTTA+AGG 0.370558 7.4:+14795806 None:intergenic
GCTGTTATCTAGTTCCTTAC+CGG 0.377727 7.4:+14792983 None:intergenic
CGAGTATGGTTATGATATAT+TGG 0.381319 7.4:-14793595 MS.gene72920:CDS
GAGTTCCTTGTGATTCCATT+TGG 0.383289 7.4:-14793492 MS.gene72920:CDS
GCAATCAATATTTGTTGCAT+TGG 0.386905 7.4:-14793636 MS.gene72920:CDS
ATTTGACGGTTGACTTCTCT+TGG 0.396408 7.4:+14792937 None:intergenic
AAGTCTTCTCAGTCCGAGTA+TGG 0.398368 7.4:-14793609 MS.gene72920:CDS
GTTGCAATTCAGTGTGATAA+TGG 0.405881 7.4:-14794077 MS.gene72920:intron
AGTTTCATCATTAGACTTCA+AGG 0.423958 7.4:+14793728 None:intergenic
TGAAAGACGGGAATGCTTAA+GGG 0.427945 7.4:+14795807 None:intergenic
CAAATTCGTCCTCCGCATCA+TGG 0.453984 7.4:-14792919 MS.gene72920:CDS
AAATTCGTCCTCCGCATCAT+GGG 0.461108 7.4:-14792918 MS.gene72920:CDS
CTTGGATGTTGTAATTGGCA+AGG 0.467473 7.4:+14792955 None:intergenic
ATATACATATTGACCATCAC+TGG 0.468346 7.4:-14793113 MS.gene72920:CDS
GTTCCTAAGTTTAGGATAGC+AGG 0.474052 7.4:+14794037 None:intergenic
GCTAATGCGCAATGAGCACT+TGG 0.479365 7.4:+14794007 None:intergenic
ATCAGACGCTGCATATGCAT+TGG 0.487180 7.4:+14793011 None:intergenic
GAGGGCAGTAGCACGGCTCA+TGG 0.499884 7.4:+14793859 None:intergenic
GTTGGAAATCACCACAGGAA+TGG 0.503182 7.4:+14795863 None:intergenic
GATGCAACAAAGTCACAATC+TGG 0.507014 7.4:+14793834 None:intergenic
TACTCGGACTGAGAAGACTT+TGG 0.507820 7.4:+14793612 None:intergenic
TCAGACGCTGCATATGCATT+GGG 0.507914 7.4:+14793012 None:intergenic
CAATATATCATAACCATACT+CGG 0.508438 7.4:+14793596 None:intergenic
GCAATCAAGCACTTTAGGGT+TGG 0.512106 7.4:+14795845 None:intergenic
TGTCTGAACTCTTAACCCTC+AGG 0.512928 7.4:+14793078 None:intergenic
TGGATACGTACCTGAAAGAC+GGG 0.525785 7.4:+14795795 None:intergenic
AGAGGTTCAGAAGAACCAAA+TGG 0.531430 7.4:+14793477 None:intergenic
ACAAAGTCACAATCTGGCAG+AGG 0.531500 7.4:+14793840 None:intergenic
GATGCGGAGGACGAATTTGA+CGG 0.534213 7.4:+14792923 None:intergenic
CTACCTGCTATCCTAAACTT+AGG 0.540082 7.4:-14794040 MS.gene72920:CDS
GAACAAGTTACATTGGAAAG+AGG 0.546607 7.4:-14793902 MS.gene72920:CDS
GTTCTTCAAGAGAAAAGTGA+TGG 0.555772 7.4:-14793702 MS.gene72920:CDS
TTGGATGTTGTAATTGGCAA+GGG 0.555821 7.4:+14792956 None:intergenic
GGAGATCCTCTTTCCAGTGA+TGG 0.562039 7.4:+14793100 None:intergenic
AGATAGCAATAGATTCTCAA+TGG 0.569736 7.4:+14793968 None:intergenic
ATGCAAATTTCTAGCTCGAG+AGG 0.574476 7.4:+14793459 None:intergenic
GTCTGAACTCTTAACCCTCA+GGG 0.574972 7.4:+14793079 None:intergenic
TATTGACCATCACTGGAAAG+AGG 0.575823 7.4:-14793106 MS.gene72920:CDS
ATGGATACGTACCTGAAAGA+CGG 0.587197 7.4:+14795794 None:intergenic
AATTCGTCCTCCGCATCATG+GGG 0.592762 7.4:-14792917 MS.gene72920:CDS
AGCATGTCAACCATAAACAC+AGG 0.598137 7.4:-14793794 MS.gene72920:CDS
AGAGAGAGAACAAGTTACAT+TGG 0.598937 7.4:-14793909 MS.gene72920:CDS
AGACTTCAAGGAGACAATGA+AGG 0.605737 7.4:+14793740 None:intergenic
TTAGGGTTGGAAATCACCAC+AGG 0.609264 7.4:+14795858 None:intergenic
AAGAATCTTCTCCTTCACAT+TGG 0.613844 7.4:+14793049 None:intergenic
TCTGGCAGAGGGCAGTAGCA+CGG 0.619325 7.4:+14793852 None:intergenic
CAAAGTCACAATCTGGCAGA+GGG 0.635490 7.4:+14793841 None:intergenic
TGGAAATCACCACAGGAATG+GGG 0.639175 7.4:+14795865 None:intergenic
TGGAAAGAGGATCTCCCTGA+GGG 0.642108 7.4:-14793093 MS.gene72920:CDS
GAAGGAGAAGATTCTTGACA+AGG 0.642223 7.4:-14793042 MS.gene72920:CDS
AGACACGATAGCCAATGTGA+AGG 0.673184 7.4:-14793060 MS.gene72920:CDS
TAAGAATAGCCCCATTCCTG+TGG 0.673390 7.4:-14795874 MS.gene72920:CDS
CGTGTGCGAATAATGTGCAA+CGG 0.684678 7.4:-14793539 MS.gene72920:CDS
AAGAACCAAATGGAATCACA+AGG 0.686822 7.4:+14793487 None:intergenic
CTGGAAAGAGGATCTCCCTG+AGG 0.688371 7.4:-14793094 MS.gene72920:CDS
GCATGTCAACCATAAACACA+GGG 0.694639 7.4:-14793793 MS.gene72920:CDS
CTAATGCGCAATGAGCACTT+GGG 0.698509 7.4:+14794008 None:intergenic
ATTCGTCCTCCGCATCATGG+GGG 0.715042 7.4:-14792916 MS.gene72920:CDS
GGATATAAGAGGTACCATGG+GGG 0.779458 7.4:+14793434 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAAAAAAAAAATA+AGG - chr7.4:14793468-14793487 MS.gene72920:CDS 0.0%
!! AAATAAGATAATTCTTTATA+AGG + chr7.4:14794829-14794848 None:intergenic 10.0%
!! AATAAGATAATTCTTTATAA+GGG + chr7.4:14794828-14794847 None:intergenic 10.0%
!! AATTAAGTATCATTAAATTA+TGG + chr7.4:14794128-14794147 None:intergenic 10.0%
!! ATTAAGTATCATTAAATTAT+GGG + chr7.4:14794127-14794146 None:intergenic 10.0%
!!! AAAAAAAATAAGGAAAATTT+TGG - chr7.4:14793478-14793497 MS.gene72920:CDS 10.0%
!!! AAAAATAATAAGATTTTGAT+AGG + chr7.4:14795591-14795610 None:intergenic 10.0%
!!! TAATGAAATATTTCTATTTT+AGG + chr7.4:14793987-14794006 None:intergenic 10.0%
!! AATCAAGAGTTTATAATTTA+AGG - chr7.4:14793921-14793940 MS.gene72920:CDS 15.0%
!! ATCAAGAGTTTATAATTTAA+GGG - chr7.4:14793922-14793941 MS.gene72920:CDS 15.0%
!! TTTGTTTCAATTAATAATTG+TGG + chr7.4:14793394-14793413 None:intergenic 15.0%
!!! ACTACTAAAACTATTATTTT+AGG + chr7.4:14793336-14793355 None:intergenic 15.0%
!!! ATCCTTAATTTTCTAATAAA+TGG + chr7.4:14793878-14793897 None:intergenic 15.0%
!!! CTTTAAAAATGAAATATTAG+AGG + chr7.4:14793432-14793451 None:intergenic 15.0%
!! AAAAAAAACAAGCAAAGAAA+AGG + chr7.4:14795567-14795586 None:intergenic 20.0%
!! AAATTAAGGATGAATATTAG+AGG - chr7.4:14793887-14793906 MS.gene72920:CDS 20.0%
!! ACAAAATACTTAGACAAAAA+AGG - chr7.4:14794240-14794259 MS.gene72920:intron 20.0%
!! GACCATTTATTAGAAAATTA+AGG - chr7.4:14793873-14793892 MS.gene72920:CDS 20.0%
!!! AAAACAGTAACATTCTTTTT+TGG + chr7.4:14795670-14795689 None:intergenic 20.0%
!!! AATAATAGTACTATGCTTTT+TGG - chr7.4:14795314-14795333 MS.gene72920:intron 20.0%
!!! AGACTTTGATATTATCTTTT+AGG - chr7.4:14793711-14793730 MS.gene72920:CDS 20.0%
!!! CAAATGTAGAAACTTTTTAT+TGG + chr7.4:14794065-14794084 None:intergenic 20.0%
!!! GTTACTGTTTTTCTATTTTT+TGG - chr7.4:14795679-14795698 MS.gene72920:intron 20.0%
!!! TAGTTTTAGTAGTTTTATGT+AGG - chr7.4:14793343-14793362 MS.gene72920:intron 20.0%
!!! TCTAATACCAAATTTTCTTA+TGG - chr7.4:14795209-14795228 MS.gene72920:intron 20.0%
!!! TTTATCATTGATTATTGTGT+TGG - chr7.4:14795821-14795840 MS.gene72920:CDS 20.0%
!!! TTTTATTTTGTTTTAGCAAG+TGG - chr7.4:14794846-14794865 MS.gene72920:intron 20.0%
! AAAATTTATTACAGCACAAC+AGG + chr7.4:14795772-14795791 None:intergenic 25.0%
! AAACCAAATGTAAAGCAAAT+AGG + chr7.4:14794600-14794619 None:intergenic 25.0%
! AAATTTATTACAGCACAACA+GGG + chr7.4:14795771-14795790 None:intergenic 25.0%
! AACAAGTATTTCACTTTAGA+GGG - chr7.4:14793834-14793853 MS.gene72920:CDS 25.0%
! AACATATATGTATCCAACAA+CGG + chr7.4:14794772-14794791 None:intergenic 25.0%
! AATGAAATATTAGAGGAAGT+TGG + chr7.4:14793425-14793444 None:intergenic 25.0%
! CAATATATCATAACCATACT+CGG + chr7.4:14795384-14795403 None:intergenic 25.0%
! GTAATTCAAACTTACAAAAC+TGG - chr7.4:14793740-14793759 MS.gene72920:CDS 25.0%
! TAAATATGAGTCTATAAGCA+AGG + chr7.4:14793785-14793804 None:intergenic 25.0%
! TAACAAGTATTTCACTTTAG+AGG - chr7.4:14793833-14793852 MS.gene72920:CDS 25.0%
! TTGCTTATAGACTCATATTT+AGG - chr7.4:14793784-14793803 MS.gene72920:CDS 25.0%
! TTTCAAATTATTAGCTGTGT+CGG + chr7.4:14794380-14794399 None:intergenic 25.0%
!! ATATCAAATCTAGAGTGTAA+AGG + chr7.4:14793627-14793646 None:intergenic 25.0%
!! ATTCTTACCATCATCTTTTT+CGG + chr7.4:14793090-14793109 None:intergenic 25.0%
!! TATCAAATCTAGAGTGTAAA+GGG + chr7.4:14793626-14793645 None:intergenic 25.0%
!! TGCTGTAATAAATTTTGCAA+TGG - chr7.4:14795776-14795795 MS.gene72920:intron 25.0%
!!! ACTTACAAAACTGGTTTTTA+AGG - chr7.4:14793749-14793768 MS.gene72920:CDS 25.0%
!!! TAATTTTCTCACTTTAGAAG+AGG - chr7.4:14794143-14794162 MS.gene72920:intron 25.0%
AAAACGCTATATCAAAGTCT+AGG + chr7.4:14794733-14794752 None:intergenic 30.0%
AAACGCTATATCAAAGTCTA+GGG + chr7.4:14794732-14794751 None:intergenic 30.0%
AGAAGGATGTATAAAACTGT+AGG + chr7.4:14794664-14794683 None:intergenic 30.0%
AGAGATAGTGATTCTATCTA+AGG - chr7.4:14794512-14794531 MS.gene72920:intron 30.0%
AGATAGCAATAGATTCTCAA+TGG + chr7.4:14795012-14795031 None:intergenic 30.0%
AGCAAAGAAAAGGATATAAG+AGG + chr7.4:14795557-14795576 None:intergenic 30.0%
AGTTTCATCATTAGACTTCA+AGG + chr7.4:14795252-14795271 None:intergenic 30.0%
ATATACATATTGACCATCAC+TGG - chr7.4:14795864-14795883 MS.gene72920:CDS 30.0%
CATAAAAGCTCAAAAGTAGA+AGG + chr7.4:14794681-14794700 None:intergenic 30.0%
CGAGTATGGTTATGATATAT+TGG - chr7.4:14795382-14795401 MS.gene72920:intron 30.0%
GTTGTTGGATACATATATGT+TGG - chr7.4:14794771-14794790 MS.gene72920:intron 30.0%
TACACTCTAGATTTGATATC+TGG - chr7.4:14793628-14793647 MS.gene72920:CDS 30.0%
TATTAGAATCCCTGTGTTTA+TGG + chr7.4:14795196-14795215 None:intergenic 30.0%
TCATGTTCGAATGCAAAATA+TGG - chr7.4:14795041-14795060 MS.gene72920:intron 30.0%
TCTACTGTATGTTTACTCTA+GGG - chr7.4:14793235-14793254 MS.gene72920:intron 30.0%
TTCAGTGTAATTACAAGTGT+CGG - chr7.4:14794411-14794430 MS.gene72920:intron 30.0%
TTCTACTGTATGTTTACTCT+AGG - chr7.4:14793234-14793253 MS.gene72920:intron 30.0%
TTTACTAGAACAACGTGATT+AGG - chr7.4:14792974-14792993 MS.gene72920:CDS 30.0%
! AAGTATTTTGTGTCACCATA+TGG + chr7.4:14794231-14794250 None:intergenic 30.0%
! AGACTTTGATATAGCGTTTT+CGG - chr7.4:14794733-14794752 MS.gene72920:intron 30.0%
! CTTTTGAGCTTTTATGTGTA+TGG - chr7.4:14794685-14794704 MS.gene72920:intron 30.0%
! GCAATCAATATTTGTTGCAT+TGG - chr7.4:14795341-14795360 MS.gene72920:intron 30.0%
! TTCTTACCATCATCTTTTTC+GGG + chr7.4:14793089-14793108 None:intergenic 30.0%
!!! CAAAACTGGTTTTTAAGGTA+AGG - chr7.4:14793754-14793773 MS.gene72920:CDS 30.0%
AAATTCCTCCACATCTTATG+CGG - chr7.4:14794167-14794186 MS.gene72920:intron 35.0%
AAGAACCAAATGGAATCACA+AGG + chr7.4:14795493-14795512 None:intergenic 35.0%
AAGAATCTTCTCCTTCACAT+TGG + chr7.4:14795931-14795950 None:intergenic 35.0%
AGAGAGAGAACAAGTTACAT+TGG - chr7.4:14795068-14795087 MS.gene72920:intron 35.0%
AGGCCTATTTGCTTTACATT+TGG - chr7.4:14794594-14794613 MS.gene72920:intron 35.0%
ATGTAGCAATCAAGCACTTT+AGG + chr7.4:14793140-14793159 None:intergenic 35.0%
CTTCTCTTGGATGTTGTAAT+TGG + chr7.4:14796030-14796049 None:intergenic 35.0%
GAACAAGTTACATTGGAAAG+AGG - chr7.4:14795075-14795094 MS.gene72920:intron 35.0%
GGACTGACCATAAGAAAATT+TGG + chr7.4:14795219-14795238 None:intergenic 35.0%
GTTCTTCAAGAGAAAAGTGA+TGG - chr7.4:14795275-14795294 MS.gene72920:intron 35.0%
GTTGCAATTCAGTGTGATAA+TGG - chr7.4:14794900-14794919 MS.gene72920:intron 35.0%
TACTCAAAACCACAACACAA+CGG + chr7.4:14793564-14793583 None:intergenic 35.0%
TAGTGTGGTTATAACACCAA+GGG - chr7.4:14793582-14793601 MS.gene72920:CDS 35.0%
TATCGACAACGGTAAACTAA+TGG - chr7.4:14793664-14793683 MS.gene72920:CDS 35.0%
TGTAGCAATCAAGCACTTTA+GGG + chr7.4:14793139-14793158 None:intergenic 35.0%
TTCTAGGCAGTAGAAAAGAA+AGG - chr7.4:14794192-14794211 MS.gene72920:intron 35.0%
TTGGATGTTGTAATTGGCAA+GGG + chr7.4:14796024-14796043 None:intergenic 35.0%
! ACTTTGATATAGCGTTTTCG+GGG - chr7.4:14794735-14794754 MS.gene72920:intron 35.0%
! AGGCTTTATCTCATACAATG+TGG - chr7.4:14793804-14793823 MS.gene72920:CDS 35.0%
! GACTTTGATATAGCGTTTTC+GGG - chr7.4:14794734-14794753 MS.gene72920:intron 35.0%
! GAGCGGATCTATTAAGTTTT+TGG - chr7.4:14793257-14793276 MS.gene72920:intron 35.0%
! GGCTTTATCTCATACAATGT+GGG - chr7.4:14793805-14793824 MS.gene72920:CDS 35.0%
!! AAAGGATATAAGAGGTACCA+TGG + chr7.4:14795549-14795568 None:intergenic 35.0%
!! AAGGATATAAGAGGTACCAT+GGG + chr7.4:14795548-14795567 None:intergenic 35.0%
!!! AGTTATTTTAAGCCTCAGAG+AGG - chr7.4:14794567-14794586 MS.gene72920:intron 35.0%
AGAAATTTGCATAACCCCCA+TGG - chr7.4:14795529-14795548 MS.gene72920:intron 40.0%
AGACTTCAAGGAGACAATGA+AGG + chr7.4:14795240-14795259 None:intergenic 40.0%
AGAGGTTCAGAAGAACCAAA+TGG + chr7.4:14795503-14795522 None:intergenic 40.0%
AGCATGTCAACCATAAACAC+AGG - chr7.4:14795183-14795202 MS.gene72920:intron 40.0%
ATGGATACGTACCTGAAAGA+CGG + chr7.4:14793186-14793205 None:intergenic 40.0%
ATTGCTTAACATGTGCCCTT+AGG + chr7.4:14793964-14793983 None:intergenic 40.0%
CTACCTGCTATCCTAAACTT+AGG - chr7.4:14794937-14794956 MS.gene72920:intron 40.0%
CTTGGATGTTGTAATTGGCA+AGG + chr7.4:14796025-14796044 None:intergenic 40.0%
GAAGGAGAAGATTCTTGACA+AGG - chr7.4:14795935-14795954 MS.gene72920:intron 40.0%
GAGTTCCTTGTGATTCCATT+TGG - chr7.4:14795485-14795504 MS.gene72920:intron 40.0%
GATGCAACAAAGTCACAATC+TGG + chr7.4:14795146-14795165 None:intergenic 40.0%
GCATGTCAACCATAAACACA+GGG - chr7.4:14795184-14795203 MS.gene72920:intron 40.0%
GGACACTTGTTCCTAAGTTT+AGG + chr7.4:14794951-14794970 None:intergenic 40.0%
GTAGTGTGGTTATAACACCA+AGG - chr7.4:14793581-14793600 MS.gene72920:CDS 40.0%
GTTGATCCCGAAAAAGATGA+TGG - chr7.4:14793080-14793099 MS.gene72920:CDS 40.0%
TAAGCTATGAAGCACGAACA+TGG - chr7.4:14794325-14794344 MS.gene72920:intron 40.0%
TAGGCAGTAGAAAAGAAAGG+AGG - chr7.4:14794195-14794214 MS.gene72920:intron 40.0%
TATTGACCATCACTGGAAAG+AGG - chr7.4:14795871-14795890 MS.gene72920:CDS 40.0%
TGAAAGACGGGAATGCTTAA+GGG + chr7.4:14793173-14793192 None:intergenic 40.0%
TTCGCACACGACTGAAATTT+CGG + chr7.4:14795428-14795447 None:intergenic 40.0%
TTGCTTAACATGTGCCCTTA+GGG + chr7.4:14793963-14793982 None:intergenic 40.0%
TTGGAAATCACCACAGGAAT+GGG + chr7.4:14793116-14793135 None:intergenic 40.0%
! ATTTGACGGTTGACTTCTCT+TGG + chr7.4:14796043-14796062 None:intergenic 40.0%
! GCTGTTATCTAGTTCCTTAC+CGG + chr7.4:14795997-14796016 None:intergenic 40.0%
! GTTCCTAAGTTTAGGATAGC+AGG + chr7.4:14794943-14794962 None:intergenic 40.0%
! TGTATGTTTACTCTAGGGAG+CGG - chr7.4:14793240-14793259 MS.gene72920:intron 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + chr7.4:14794103-14794122 None:intergenic 40.0%
!! ACTCATTAACTTGTGCCTTG+AGG - chr7.4:14794085-14794104 MS.gene72920:intron 40.0%
!! AGGATATAAGAGGTACCATG+GGG + chr7.4:14795547-14795566 None:intergenic 40.0%
!! ATGCAAATTTCTAGCTCGAG+AGG + chr7.4:14795521-14795540 None:intergenic 40.0%
!! CATGTTAACTTGTGCCCTAA+GGG - chr7.4:14793946-14793965 MS.gene72920:CDS 40.0%
!! CTCATTAACTTGTGCCTTGA+GGG - chr7.4:14794086-14794105 MS.gene72920:intron 40.0%
!! GTAATTACAAGTGTCGGTGT+CGG - chr7.4:14794417-14794436 MS.gene72920:intron 40.0%
!! TCATGTTAACTTGTGCCCTA+AGG - chr7.4:14793945-14793964 MS.gene72920:CDS 40.0%
!!! TCATCTTTTTCGGGATCAAC+AGG + chr7.4:14793080-14793099 None:intergenic 40.0%
!!! TGTTGTGGTTTTGAGTAGTG+TGG - chr7.4:14793567-14793586 MS.gene72920:CDS 40.0%
AAATTCGTCCTCCGCATCAT+GGG - chr7.4:14796059-14796078 MS.gene72920:intron 45.0%
AAGTCTTCTCAGTCCGAGTA+TGG - chr7.4:14795368-14795387 MS.gene72920:intron 45.0%
ACAAAGTCACAATCTGGCAG+AGG + chr7.4:14795140-14795159 None:intergenic 45.0%
ACGTTGCACTTGAGAGTCAT+GGG + chr7.4:14793535-14793554 None:intergenic 45.0%
AGACACGATAGCCAATGTGA+AGG - chr7.4:14795917-14795936 MS.gene72920:CDS 45.0%
ATCAGACGCTGCATATGCAT+TGG + chr7.4:14795969-14795988 None:intergenic 45.0%
CAAAGTCACAATCTGGCAGA+GGG + chr7.4:14795139-14795158 None:intergenic 45.0%
CACATCTTATGCGGCTTTCT+AGG - chr7.4:14794176-14794195 MS.gene72920:intron 45.0%
CGCGACTTAGTTATCGACAA+CGG - chr7.4:14793653-14793672 MS.gene72920:CDS 45.0%
CGTGTGCGAATAATGTGCAA+CGG - chr7.4:14795438-14795457 MS.gene72920:intron 45.0%
CTAATGCGCAATGAGCACTT+GGG + chr7.4:14794972-14794991 None:intergenic 45.0%
CTAGAAAGCCGCATAAGATG+TGG + chr7.4:14794178-14794197 None:intergenic 45.0%
CTGAAAGACGGGAATGCTTA+AGG + chr7.4:14793174-14793193 None:intergenic 45.0%
CTTAAGCATTCCCGTCTTTC+AGG - chr7.4:14793172-14793191 MS.gene72920:intron 45.0%
GTCTGAACTCTTAACCCTCA+GGG + chr7.4:14795901-14795920 None:intergenic 45.0%
GTGTCACCATATGGACAACT+TGG + chr7.4:14794222-14794241 None:intergenic 45.0%
GTTGGAAATCACCACAGGAA+TGG + chr7.4:14793117-14793136 None:intergenic 45.0%
TAAGAATAGCCCCATTCCTG+TGG - chr7.4:14793103-14793122 MS.gene72920:CDS 45.0%
TACTCGGACTGAGAAGACTT+TGG + chr7.4:14795368-14795387 None:intergenic 45.0%
TATGAAGCACGAACACTCCT+CGG + chr7.4:14794478-14794497 None:intergenic 45.0%
TCAGACGCTGCATATGCATT+GGG + chr7.4:14795968-14795987 None:intergenic 45.0%
TGGAAATCACCACAGGAATG+GGG + chr7.4:14793115-14793134 None:intergenic 45.0%
TGGATACGTACCTGAAAGAC+GGG + chr7.4:14793185-14793204 None:intergenic 45.0%
TGTCTGAACTCTTAACCCTC+AGG + chr7.4:14795902-14795921 None:intergenic 45.0%
TTAGGGTTGGAAATCACCAC+AGG + chr7.4:14793122-14793141 None:intergenic 45.0%
! AGTCAAAAAGTGCACGTGCA+CGG - chr7.4:14793051-14793070 MS.gene72920:CDS 45.0%
! ATGCAGCGTCTGATCTTTTC+CGG - chr7.4:14795975-14795994 MS.gene72920:intron 45.0%
! GGTTATAACACCAAGGGTGT+AGG - chr7.4:14793588-14793607 MS.gene72920:CDS 45.0%
! TGTTTAGAGTCCTACACCCT+TGG + chr7.4:14793601-14793620 None:intergenic 45.0%
!! GCAATCAAGCACTTTAGGGT+TGG + chr7.4:14793135-14793154 None:intergenic 45.0%
!! GGATATAAGAGGTACCATGG+GGG + chr7.4:14795546-14795565 None:intergenic 45.0%
!! CAAAAAATAAAAAAATAAAA+TGG + chr7.4:14793205-14793224 None:intergenic 5.0%
AATTCGTCCTCCGCATCATG+GGG - chr7.4:14796060-14796079 MS.gene72920:intron 50.0%
ACACAACACGTGTCTGACAC+TGG - chr7.4:14794440-14794459 MS.gene72920:intron 50.0%
CAAATTCGTCCTCCGCATCA+TGG - chr7.4:14796058-14796077 MS.gene72920:intron 50.0%
CACAACACGTGTCTGACACT+GGG - chr7.4:14794441-14794460 MS.gene72920:intron 50.0%
CACGTTGCACTTGAGAGTCA+TGG + chr7.4:14793536-14793555 None:intergenic 50.0%
CGTGAAACTCCGTTGTGTTG+TGG - chr7.4:14793552-14793571 MS.gene72920:CDS 50.0%
GAAAGCCGCATAAGATGTGG+AGG + chr7.4:14794175-14794194 None:intergenic 50.0%
GATGCGGAGGACGAATTTGA+CGG + chr7.4:14796057-14796076 None:intergenic 50.0%
GCTAATGCGCAATGAGCACT+TGG + chr7.4:14794973-14794992 None:intergenic 50.0%
GGAGATCCTCTTTCCAGTGA+TGG + chr7.4:14795880-14795899 None:intergenic 50.0%
GGAGGACCAAGTTGTCCATA+TGG - chr7.4:14794213-14794232 MS.gene72920:intron 50.0%
GTATAGCCACACCAAGCCAT+AGG - chr7.4:14793500-14793519 MS.gene72920:CDS 50.0%
TGAAGCACGAACATGGACAC+CGG - chr7.4:14794332-14794351 MS.gene72920:intron 50.0%
TGGAAAGAGGATCTCCCTGA+GGG - chr7.4:14795884-14795903 MS.gene72920:CDS 50.0%
TTAAGCCTCAGAGAGGCTTG+AGG - chr7.4:14794574-14794593 MS.gene72920:intron 50.0%
TTGCACTTGAGAGTCATGGG+CGG + chr7.4:14793532-14793551 None:intergenic 50.0%
! GCGTCTGATCTTTTCCGGTA+AGG - chr7.4:14795980-14795999 MS.gene72920:intron 50.0%
! GTCAAAAAGTGCACGTGCAC+GGG - chr7.4:14793052-14793071 MS.gene72920:CDS 50.0%
!! ACCTATCCTATGGCTTGGTG+TGG + chr7.4:14793509-14793528 None:intergenic 50.0%
!! ATCCAACAACGGATTGCGTC+TGG + chr7.4:14794761-14794780 None:intergenic 50.0%
ATAGGCCTCAAGCCTCTCTG+AGG + chr7.4:14794582-14794601 None:intergenic 55.0%
ATTCGTCCTCCGCATCATGG+GGG - chr7.4:14796061-14796080 MS.gene72920:intron 55.0%
CTGGAAAGAGGATCTCCCTG+AGG - chr7.4:14795883-14795902 MS.gene72920:CDS 55.0%
GCACGAACACTCCTCGGATT+AGG + chr7.4:14794472-14794491 None:intergenic 55.0%
GCCACACCAAGCCATAGGAT+AGG - chr7.4:14793505-14793524 MS.gene72920:CDS 55.0%
TCATGGGCGGACCTATCCTA+TGG + chr7.4:14793519-14793538 None:intergenic 55.0%
ACTGGGACACGCCTAATCCG+AGG - chr7.4:14794458-14794477 MS.gene72920:intron 60.0%
CATGGACACCGGACACGACA+CGG - chr7.4:14794343-14794362 MS.gene72920:intron 60.0%
GGCCAGACGCAATCCGTTGT+TGG - chr7.4:14794756-14794775 MS.gene72920:intron 60.0%
GGCGGACCTATCCTATGGCT+TGG + chr7.4:14793514-14793533 None:intergenic 60.0%
GTCAGTGTCCGTGTCGTGTC+CGG + chr7.4:14794354-14794373 None:intergenic 60.0%
TCTGGCAGAGGGCAGTAGCA+CGG + chr7.4:14795128-14795147 None:intergenic 60.0%
GAGGGCAGTAGCACGGCTCA+TGG + chr7.4:14795121-14795140 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 14792911 14796088 14792911 ID=MS.gene72920
chr7.4 mRNA 14792911 14796088 14792911 ID=MS.gene72920.t1;Parent=MS.gene72920
chr7.4 exon 14796071 14796088 14796071 ID=MS.gene72920.t1.exon1;Parent=MS.gene72920.t1
chr7.4 CDS 14796071 14796088 14796071 ID=cds.MS.gene72920.t1;Parent=MS.gene72920.t1
chr7.4 exon 14795806 14795946 14795806 ID=MS.gene72920.t1.exon2;Parent=MS.gene72920.t1
chr7.4 CDS 14795806 14795946 14795806 ID=cds.MS.gene72920.t1;Parent=MS.gene72920.t1
chr7.4 exon 14793449 14794087 14793449 ID=MS.gene72920.t1.exon3;Parent=MS.gene72920.t1
chr7.4 CDS 14793449 14794087 14793449 ID=cds.MS.gene72920.t1;Parent=MS.gene72920.t1
chr7.4 exon 14792911 14793141 14792911 ID=MS.gene72920.t1.exon4;Parent=MS.gene72920.t1
chr7.4 CDS 14792911 14793141 14792911 ID=cds.MS.gene72920.t1;Parent=MS.gene72920.t1
Gene Sequence

>MS.gene72920

ATGCTTCGTTGTTTTTTTGTGAGTGTTTTGCTAAATGTAATTTTTAACAGCTTCATATTTTCGTTTACTAGAACAACGTGATTAGGCTTAAGTCAAAAATTTGATTTTGATTATATGTTACTTATTTGTAATCACTGTTTAGTCAAAAAGTGCACGTGCACGGGTGCCTGTTGATCCCGAAAAAGATGATGGTAAGAATAGCCCCATTCCTGTGGTGATTTCCAACCCTAAAGTGCTTGATTGCTACATTTGTTTTCAACCCTTAAGCATTCCCGTCTTTCAGGTACGTATCCATTTTATTTTTTTATTTTTTGTTCACTCTTTTCTACTGTATGTTTACTCTAGGGAGCGGATCTATTAAGTTTTTGGTGTGACTAAAATAATATTGTAAAAAAAAAAATTTAAGACTATGTACTATTTCACCTAAAATAATAGTTTTAGTAGTTTTATGTAGGCTAGTTTTATTAGTTCAAATACATACCACAATTATTAATTGAAACAAAATAAACAACCAACTTCCTCTAATATTTCATTTTTAAAGACATCTTTCATATATGTAAAAAAAAAAAAAAAAATAAGGAAAATTTTGGTATAGCCACACCAAGCCATAGGATAGGTCCGCCCATGACTCTCAAGTGCAACGTGAAACTCCGTTGTGTTGTGGTTTTGAGTAGTGTGGTTATAACACCAAGGGTGTAGGACTCTAAACACACCCTTTACACTCTAGATTTGATATCTGGAGCGCGACTTAGTTATCGACAACGGTAAACTAATGGTATGTAGTTCAACAGATTTTAGATAGACTTTGATATTATCTTTTAGGTTGAATGTAATTCAAACTTACAAAACTGGTTTTTAAGGTAAGGAATATCCTTGCTTATAGACTCATATTTAGGCTTTATCTCATACAATGTGGGAGTCTTAACAAGTATTTCACTTTAGAGGGTAAAGTAATTAATATCGACCATTTATTAGAAAATTAAGGATGAATATTAGAGGTACTTCGTTGCAATCAAGAGTTTATAATTTAAGGGTCATGTTAACTTGTGCCCTAAGGGCACATGTTAAGCAATCCTAAAATAGAAATATTTCATTAACATTTGTGCATTCAATTAATTAAAAGTCAACAAATTAAATGCAATACACGAATTCCAATAAAAAGTTTCTACATTTGACTCATTAACTTGTGCCTTGAGGGCACAAGTTAACATTTCCCATAATTTAATGATACTTAATTTTCTCACTTTAGAAGAGGCAAATTCCTCCACATCTTATGCGGCTTTCTAGGCAGTAGAAAAGAAAGGAGGACCAAGTTGTCCATATGGTGACACAAAATACTTAGACAAAAAAGGAGAAAGATGCATAACAAATTATGTCTAGTAGTGAAGAGAGTGAGCATGATGATGACGATGAATAAGCTATGAAGCACGAACATGGACACCGGACACGACACGGACACTGACACGCCGACACAGCTAATAATTTGAAAAAATAACATAATTCAGTGTAATTACAAGTGTCGGTGTCGGACACAACACGTGTCTGACACTGGGACACGCCTAATCCGAGGAGTGTTCGTGCTTCATAGTGAATAAGTGATTAGAGATAGTGATTCTATCTAAGGAATCACTTTTATTTATTTTAATTTCTTGAATGAGTTATTTTAAGCCTCAGAGAGGCTTGAGGCCTATTTGCTTTACATTTGGTTTGAATATCAGTAACAATGAACTTTGAATAATAATTATGAATGCCTACAGTTTTATACATCCTTCTACTTTTGAGCTTTTATGTGTATGGTATTAACATCTTGTATTGTTTCCCTAGACTTTGATATAGCGTTTTCGGGGCCAGACGCAATCCGTTGTTGGATACATATATGTTGGTTATACTTTTGATTGCAGAATTTGCTAACAACCCTTATAAAGAATTATCTTATTTTATTTTGTTTTAGCAAGTGGTTCAAAGTCTAATTTGATGATTTTCTTTTTTGTTGCAATTCAGTGTGATAATGGTCATATTGCTTGCTCTACCTGCTATCCTAAACTTAGGAACAAGTGTCCCAAGTGCTCATTGCGCATTAGCTCAAAACGTTGTAAAGCCATTGAGAATCTATTGCTATCTATTGAATTGTCATGTTCGAATGCAAAATATGGTTGCAGAGAGAGAACAAGTTACATTGGAAAGAGGAATCATGAAGAACAATGCATCCATGAGCCGTGCTACTGCCCTCTGCCAGATTGTGACTTTGTTGCATCATCAGAAGTGTTGTCTAAGCATGTCAACCATAAACACAGGGATTCTAATACCAAATTTTCTTATGGTCAGTCCTTCATTGTCTCCTTGAAGTCTAATGATGAAACTATTGTTCTTCAAGAGAAAAGTGATGGCAAACTATTTATTCTCAATAATAGTACTATGCTTTTTGGAAATGCAATCAATATTTGTTGCATTGGTCCAAAGTCTTCTCAGTCCGAGTATGGTTATGATATATTGGCTAGATCTCAAGCATGCAAACCGAAATTTCAGTCGTGTGCGAATAATGTGCAACGGTTTACTTTATCAACTCTTTCATTAGAGTTCCTTGTGATTCCATTTGGTTCTTCTGAACCTCTCGAGCTAGAAATTTGCATAACCCCCATGGTACCTCTTATATCCTTTTCTTTGCTTGTTTTTTTTTCCTATCAAAATCTTATTATTTTTTTTGTTTTGAATTTATACTCTAGCATTTAATCTCAAATTCATCAGTTTTTCAAATGCCAAAAAAGAATGTTACTGTTTTTCTATTTTTTGGATTAGTTCTTGAAATATCAGTCTCAACTCAAATTTTCTTTTATTGATTTGATCATGAATTTCTTTTCCCTGTTGTGCTGTAATAAATTTTGCAATGGATTTTGTTTTCTTTCTGTTGCTTTTATCATTGATTATTGTGTTGGCAAATGTCTTGCAGATGCTAATATACATATTGACCATCACTGGAAAGAGGATCTCCCTGAGGGTTAAGAGTTCAGACACGATAGCCAATGTGAAGGAGAAGATTCTTGACAAGGAAGAGATCCCAATGCATATGCAGCGTCTGATCTTTTCCGGTAAGGAACTAGATAACAGCTTGACCCTTGCCAATTACAACATCCAAGAGAAGTCAACCGTCAAATTCGTCCTCCGCATCATGGGGGATTAG
Protein sequence

>MS.gene72920.t1

MLRCFFSKSARARVPVDPEKDDGKNSPIPVVISNPKVLDCYICFQPLSIPVFQCDNGHIACSTCYPKLRNKCPKCSLRISSKRCKAIENLLLSIELSCSNAKYGCRERTSYIGKRNHEEQCIHEPCYCPLPDCDFVASSEVLSKHVNHKHRDSNTKFSYGQSFIVSLKSNDETIVLQEKSDGKLFILNNSTMLFGNAINICCIGPKSSQSEYGYDILARSQACKPKFQSCANNVQRFTLSTLSLEFLVIPFGSSEPLELEICITPMMLIYILTITGKRISLRVKSSDTIANVKEKILDKEEIPMHMQRLIFSGKELDNSLTLANYNIQEKSTVKFVLRIMGD