AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene009591


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009591.t1 MTR_5g076370 93.548 341 21 1 1 341 1 340 0.0 647
MS.gene009591.t1 MTR_5g076660 66.568 338 111 2 1 338 1 336 6.20e-148 421
MS.gene009591.t1 MTR_7g024290 69.205 302 88 3 37 337 14 311 3.04e-142 405
MS.gene009591.t1 MTR_5g067400 65.714 315 103 3 26 340 4 313 1.77e-140 400
MS.gene009591.t1 MTR_1g046640 66.032 315 101 4 26 340 4 312 1.83e-140 400
MS.gene009591.t1 MTR_1g046650 63.030 330 112 5 15 340 20 343 1.93e-138 397
MS.gene009591.t1 MTR_1g046650 64.444 315 106 4 26 340 4 312 2.39e-138 395
MS.gene009591.t1 MTR_5g076720 61.988 342 122 4 2 340 51 387 4.62e-138 397
MS.gene009591.t1 MTR_7g094390 63.030 330 117 3 9 338 148 472 3.88e-135 393
MS.gene009591.t1 MTR_1g046650 65.979 291 95 2 50 340 26 312 4.48e-133 382
MS.gene009591.t1 MTR_2g038420 61.377 334 119 5 10 338 2 330 2.09e-127 368
MS.gene009591.t1 MTR_2g038430 58.235 340 124 5 10 336 2 336 3.76e-125 363
MS.gene009591.t1 MTR_5g076810 68.401 269 81 2 73 340 2 267 2.21e-123 355
MS.gene009591.t1 MTR_5g061290 59.756 328 117 6 20 340 5 324 7.10e-123 356
MS.gene009591.t1 MTR_5g076520 60.568 317 116 5 26 338 4 315 9.88e-120 348
MS.gene009591.t1 MTR_5g076505 60.137 291 110 2 51 338 23 310 1.31e-115 337
MS.gene009591.t1 MTR_1g046650 65.587 247 81 2 94 340 1 243 4.26e-110 321
MS.gene009591.t1 MTR_5g076820 63.846 260 86 4 46 301 30 285 7.76e-105 309
MS.gene009591.t1 MTR_5g076540 64.889 225 77 2 26 250 4 226 1.02e-92 276
MS.gene009591.t1 MTR_5g077020 59.091 198 67 4 77 266 17 208 1.83e-66 209
MS.gene009591.t1 MTR_4g094468 42.739 241 134 4 24 264 88 324 5.08e-60 196
MS.gene009591.t1 MTR_4g058025 76.106 113 26 1 105 216 14 126 1.26e-50 167
MS.gene009591.t1 MTR_5g092700 61.644 73 28 0 268 340 1 73 4.43e-22 91.3
MS.gene009591.t1 MTR_4g073580 61.644 73 28 0 268 340 1 73 4.43e-22 91.3
MS.gene009591.t1 MTR_7g105080 61.644 73 28 0 268 340 1 73 9.26e-22 89.7
MS.gene009591.t1 MTR_3g092130 61.644 73 28 0 268 340 1 73 9.26e-22 89.7
MS.gene009591.t1 MTR_1g059690 61.644 73 28 0 268 340 1 73 9.26e-22 89.7
MS.gene009591.t1 MTR_4g073580 61.644 73 28 0 268 340 1 73 1.29e-21 90.9
MS.gene009591.t1 MTR_4g088485 56.627 83 36 0 258 340 128 210 1.40e-21 91.7
MS.gene009591.t1 MTR_4g088485 61.644 73 28 0 268 340 1 73 2.85e-21 90.9
MS.gene009591.t1 MTR_7g116360 56.627 83 36 0 258 340 67 149 1.54e-21 92.0
MS.gene009591.t1 MTR_7g116360 56.627 83 36 0 258 340 143 225 1.54e-21 92.0
MS.gene009591.t1 MTR_7g116360 61.644 73 28 0 268 340 1 73 3.02e-21 91.3
MS.gene009591.t1 MTR_1g066390 56.627 83 36 0 258 340 67 149 1.54e-21 92.0
MS.gene009591.t1 MTR_1g066390 56.627 83 36 0 258 340 143 225 1.54e-21 92.0
MS.gene009591.t1 MTR_1g066390 61.644 73 28 0 268 340 1 73 3.08e-21 91.3
MS.gene009591.t1 MTR_8g088060 61.644 73 28 0 268 340 1 73 1.75e-21 89.7
MS.gene009591.t1 MTR_5g033960 61.644 73 28 0 268 340 1 73 1.84e-21 89.7
MS.gene009591.t1 MTR_7g116360 62.162 74 28 0 267 340 48 121 2.61e-21 92.4
MS.gene009591.t1 MTR_7g116360 56.627 83 36 0 258 340 115 197 4.52e-21 91.7
MS.gene009591.t1 MTR_7g116360 56.627 83 36 0 258 340 191 273 4.52e-21 91.7
MS.gene009591.t1 MTR_3g092130 61.644 73 28 0 268 340 1 73 2.96e-21 88.6
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 67 149 3.39e-21 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 143 225 3.39e-21 92.0
MS.gene009591.t1 MTR_8g018230 61.644 73 28 0 268 340 1 73 7.03e-21 90.9
MS.gene009591.t1 MTR_5g061310 60.563 71 28 0 268 338 2 72 3.87e-21 86.3
MS.gene009591.t1 MTR_6g061930 56.627 83 36 0 258 340 67 149 4.94e-21 92.0
MS.gene009591.t1 MTR_6g061930 56.627 83 36 0 258 340 204 286 4.94e-21 92.0
MS.gene009591.t1 MTR_6g061930 61.644 73 28 0 268 340 1 73 1.00e-20 90.9
MS.gene009591.t1 MTR_4g080920 55.422 83 37 0 258 340 67 149 5.71e-21 90.5
MS.gene009591.t1 MTR_4g080920 60.274 73 29 0 268 340 1 73 2.69e-20 88.6
MS.gene009591.t1 MTR_4g080920 48.148 81 42 0 258 338 143 223 1.28e-14 72.8
MS.gene009591.t1 MTR_4g081010 56.627 83 36 0 258 340 67 149 6.06e-21 92.0
MS.gene009591.t1 MTR_4g081010 56.627 83 36 0 258 340 143 225 6.06e-21 92.0
MS.gene009591.t1 MTR_4g081010 56.627 83 36 0 258 340 219 301 6.06e-21 92.0
MS.gene009591.t1 MTR_4g081010 61.644 73 28 0 268 340 1 73 1.14e-20 91.3
MS.gene009591.t1 MTR_4g081010 56.627 83 36 0 258 340 67 149 7.95e-21 90.9
MS.gene009591.t1 MTR_4g081010 56.627 83 36 0 258 340 143 225 7.95e-21 90.9
MS.gene009591.t1 MTR_4g081010 61.644 73 28 0 268 340 1 73 1.50e-20 90.1
MS.gene009591.t1 MTR_4g091580 56.627 83 36 0 258 340 295 377 1.17e-20 93.2
MS.gene009591.t1 MTR_4g091580 56.627 83 36 0 258 340 67 149 2.89e-20 92.0
MS.gene009591.t1 MTR_4g091580 56.627 83 36 0 258 340 143 225 2.89e-20 92.0
MS.gene009591.t1 MTR_4g091580 56.627 83 36 0 258 340 219 301 2.89e-20 92.0
MS.gene009591.t1 MTR_4g091580 56.627 83 36 0 258 340 371 453 2.89e-20 92.0
MS.gene009591.t1 MTR_4g091580 56.627 83 36 0 258 340 447 529 2.89e-20 92.0
MS.gene009591.t1 MTR_4g091580 61.644 73 28 0 268 340 1 73 5.06e-20 91.3
MS.gene009591.t1 MTR_4g091580 56.627 83 36 0 258 340 67 149 1.36e-20 92.0
MS.gene009591.t1 MTR_4g091580 56.627 83 36 0 258 340 143 225 1.36e-20 92.0
MS.gene009591.t1 MTR_4g091580 56.627 83 36 0 258 340 295 377 1.36e-20 92.0
MS.gene009591.t1 MTR_4g091580 61.644 73 28 0 268 340 1 73 2.50e-20 91.3
MS.gene009591.t1 MTR_4g091580 55.422 83 37 0 258 340 219 301 4.78e-20 90.5
MS.gene009591.t1 MTR_8g081020 56.627 83 36 0 258 340 67 149 1.37e-20 92.0
MS.gene009591.t1 MTR_8g081020 56.627 83 36 0 258 340 143 225 1.37e-20 92.0
MS.gene009591.t1 MTR_8g081020 56.627 83 36 0 258 340 219 301 1.37e-20 92.0
MS.gene009591.t1 MTR_8g081020 56.627 83 36 0 258 340 295 377 1.37e-20 92.0
MS.gene009591.t1 MTR_8g081020 61.644 73 28 0 268 340 1 73 2.53e-20 91.3
MS.gene009591.t1 MTR_4g081010 56.627 83 36 0 258 340 67 149 1.40e-20 92.0
MS.gene009591.t1 MTR_4g081010 56.627 83 36 0 258 340 143 225 1.40e-20 92.0
MS.gene009591.t1 MTR_4g081010 56.627 83 36 0 258 340 219 301 1.40e-20 92.0
MS.gene009591.t1 MTR_4g081010 56.627 83 36 0 258 340 295 377 1.40e-20 92.0
MS.gene009591.t1 MTR_4g081010 61.644 73 28 0 268 340 1 73 2.58e-20 91.3
MS.gene009591.t1 MTR_4g080797 56.627 83 36 0 258 340 67 149 1.41e-20 92.0
MS.gene009591.t1 MTR_4g080797 56.627 83 36 0 258 340 143 225 1.41e-20 92.0
MS.gene009591.t1 MTR_4g080797 56.627 83 36 0 258 340 219 301 1.41e-20 92.0
MS.gene009591.t1 MTR_4g080797 56.627 83 36 0 258 340 295 377 1.41e-20 92.0
MS.gene009591.t1 MTR_4g080797 61.644 73 28 0 268 340 1 73 2.60e-20 91.3
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 67 149 1.41e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 143 225 1.41e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 219 301 1.41e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 295 377 1.41e-20 92.0
MS.gene009591.t1 MTR_8g018230 61.644 73 28 0 268 340 1 73 2.60e-20 91.3
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 67 149 2.35e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 143 225 2.35e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 219 301 2.35e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 295 377 2.35e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 371 453 2.35e-20 92.0
MS.gene009591.t1 MTR_8g018230 61.644 73 28 0 268 340 1 73 4.19e-20 91.3
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 67 149 2.35e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 143 225 2.35e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 219 301 2.35e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 295 377 2.35e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 371 453 2.35e-20 92.0
MS.gene009591.t1 MTR_8g018230 61.644 73 28 0 268 340 1 73 4.19e-20 91.3
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 67 149 3.03e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 143 225 3.03e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 219 301 3.03e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 295 377 3.03e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 371 453 3.03e-20 92.0
MS.gene009591.t1 MTR_8g018230 56.627 83 36 0 258 340 447 529 3.03e-20 92.0
MS.gene009591.t1 MTR_8g018230 61.644 73 28 0 268 340 1 73 5.31e-20 91.3
MS.gene009591.t1 MTR_4g081010 56.627 83 36 0 258 340 67 149 3.09e-20 92.0
MS.gene009591.t1 MTR_4g081010 56.627 83 36 0 258 340 143 225 3.09e-20 92.0
MS.gene009591.t1 MTR_4g081010 56.627 83 36 0 258 340 219 301 3.09e-20 92.0
MS.gene009591.t1 MTR_4g081010 56.627 83 36 0 258 340 295 377 3.09e-20 92.0
MS.gene009591.t1 MTR_4g081010 56.627 83 36 0 258 340 371 453 3.09e-20 92.0
MS.gene009591.t1 MTR_4g081010 56.627 83 36 0 258 340 447 529 3.09e-20 92.0
MS.gene009591.t1 MTR_4g081010 61.644 73 28 0 268 340 1 73 5.41e-20 91.3
MS.gene009591.t1 MTR_8g479250 59.036 83 34 0 258 340 131 213 4.29e-20 89.4
MS.gene009591.t1 MTR_8g479250 45.238 84 35 1 258 341 207 279 9.18e-13 68.2
MS.gene009591.t1 MTR_4g088495 56.627 83 36 0 258 340 67 149 4.41e-20 92.0
MS.gene009591.t1 MTR_4g088495 56.627 83 36 0 258 340 143 225 4.41e-20 92.0
MS.gene009591.t1 MTR_4g088495 56.627 83 36 0 258 340 219 301 4.41e-20 92.0
MS.gene009591.t1 MTR_4g088495 56.627 83 36 0 258 340 295 377 4.41e-20 92.0
MS.gene009591.t1 MTR_4g088495 56.627 83 36 0 258 340 371 453 4.41e-20 92.0
MS.gene009591.t1 MTR_4g088495 56.627 83 36 0 258 340 447 529 4.41e-20 92.0
MS.gene009591.t1 MTR_4g088495 56.627 83 36 0 258 340 523 605 4.41e-20 92.0
MS.gene009591.t1 MTR_4g088495 56.627 83 36 0 258 340 599 681 4.41e-20 92.0
MS.gene009591.t1 MTR_4g088495 56.627 83 36 0 258 340 675 757 4.41e-20 92.0
MS.gene009591.t1 MTR_4g088495 56.627 83 36 0 258 340 751 833 4.41e-20 92.0
MS.gene009591.t1 MTR_4g088495 61.644 73 28 0 268 340 1 73 8.92e-20 90.9
MS.gene009591.t1 MTR_8g038370 27.165 254 156 10 37 269 115 360 2.41e-18 85.5
MS.gene009591.t1 MTR_1g054335 26.891 238 156 8 48 269 71 306 6.45e-18 83.6
MS.gene009591.t1 MTR_5g076740 57.333 75 31 1 267 340 85 159 7.75e-18 80.1
MS.gene009591.t1 MTR_7g093600 25.088 283 186 9 3 269 35 307 1.07e-17 82.8
MS.gene009591.t1 MTR_5g076760 64.912 57 20 0 278 334 5 61 2.92e-17 75.9
MS.gene009591.t1 MTR_3g091510 27.273 231 152 6 48 262 73 303 3.22e-17 81.6
MS.gene009591.t1 MTR_3g017590 25.359 209 145 6 37 235 56 263 4.11e-17 80.9
MS.gene009591.t1 MTR_5g076350 54.054 74 33 1 268 340 8 81 2.43e-16 73.6
MS.gene009591.t1 MTR_8g027520 26.271 236 160 6 48 269 66 301 3.21e-16 78.6
MS.gene009591.t1 MTR_8g027520 26.271 236 160 6 48 269 57 292 3.32e-16 78.6
MS.gene009591.t1 MTR_7g117415 25.000 236 163 5 48 269 74 309 3.44e-16 78.6
MS.gene009591.t1 MTR_7g085590 25.962 208 137 4 49 252 77 271 5.10e-16 77.8
MS.gene009591.t1 MTR_1g008120 25.974 231 155 6 48 262 81 311 1.52e-15 77.0
MS.gene009591.t1 MTR_5g076780 58.065 62 26 0 279 340 1 62 2.50e-15 70.1
MS.gene009591.t1 MTR_5g076340 54.795 73 31 2 268 338 9 81 4.49e-14 67.4
MS.gene009591.t1 MTR_4g009980 50.000 64 32 0 277 340 5 68 6.90e-14 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009591.t1 AT5G37930 34.583 240 147 3 37 275 113 343 1.87e-43 153
MS.gene009591.t1 AT5G37870 34.101 217 137 5 37 248 45 260 6.30e-35 129
MS.gene009591.t1 AT1G66620 29.259 270 181 6 3 264 7 274 8.96e-34 127
MS.gene009591.t1 AT5G37890 33.937 221 131 6 37 248 51 265 1.21e-33 125
MS.gene009591.t1 AT5G37910 31.507 219 141 5 37 248 38 254 8.78e-30 115
MS.gene009591.t1 AT1G66650 30.833 240 155 7 37 267 86 323 7.58e-28 111
MS.gene009591.t1 AT5G62800 30.469 256 167 8 37 284 43 295 4.18e-27 109
MS.gene009591.t1 AT5G62800 31.818 220 140 7 37 248 43 260 4.65e-27 108
MS.gene009591.t1 AT1G66630 28.916 249 155 5 37 264 49 296 4.03e-25 103
MS.gene009591.t1 AT1G66660 28.745 247 158 7 37 275 106 342 3.69e-23 99.0
MS.gene009591.t1 AT4G05050 56.627 83 36 0 258 340 67 149 2.72e-22 92.0
MS.gene009591.t1 AT4G05050 61.644 73 28 0 268 340 1 73 5.76e-22 90.9
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 67 149 2.72e-22 92.0
MS.gene009591.t1 AT4G05320 61.644 73 28 0 268 340 1 73 5.76e-22 90.9
MS.gene009591.t1 AT2G35635 61.644 73 28 0 268 340 1 73 5.50e-22 91.3
MS.gene009591.t1 AT1G31340 61.644 73 28 0 268 340 1 73 5.85e-22 91.3
MS.gene009591.t1 AT1G31340 41.538 65 38 0 276 340 85 149 9.84e-11 60.1
MS.gene009591.t1 AT3G52590 61.644 73 28 0 268 340 1 73 1.24e-21 89.4
MS.gene009591.t1 AT2G36170 61.644 73 28 0 268 340 1 73 1.24e-21 89.4
MS.gene009591.t1 AT2G47110 61.644 73 28 0 268 340 1 73 1.29e-21 90.1
MS.gene009591.t1 AT2G47110 61.644 73 28 0 268 340 1 73 1.29e-21 90.1
MS.gene009591.t1 AT3G62250 61.644 73 28 0 268 340 1 73 1.33e-21 90.1
MS.gene009591.t1 AT1G23410 61.644 73 28 0 268 340 1 73 1.40e-21 90.1
MS.gene009591.t1 AT4G05050 56.627 83 36 0 258 340 67 149 1.61e-21 92.0
MS.gene009591.t1 AT4G05050 56.627 83 36 0 258 340 143 225 1.61e-21 92.0
MS.gene009591.t1 AT4G05050 61.644 73 28 0 268 340 1 73 3.17e-21 91.3
MS.gene009591.t1 AT4G05050 56.627 83 36 0 258 340 67 149 1.61e-21 92.0
MS.gene009591.t1 AT4G05050 56.627 83 36 0 258 340 143 225 1.61e-21 92.0
MS.gene009591.t1 AT4G05050 61.644 73 28 0 268 340 1 73 3.17e-21 91.3
MS.gene009591.t1 AT4G05050 56.627 83 36 0 258 340 67 149 1.61e-21 92.0
MS.gene009591.t1 AT4G05050 56.627 83 36 0 258 340 143 225 1.61e-21 92.0
MS.gene009591.t1 AT4G05050 61.644 73 28 0 268 340 1 73 3.17e-21 91.3
MS.gene009591.t1 AT4G02890 56.627 83 36 0 258 340 67 149 1.61e-21 92.0
MS.gene009591.t1 AT4G02890 56.627 83 36 0 258 340 143 225 1.61e-21 92.0
MS.gene009591.t1 AT4G02890 61.644 73 28 0 268 340 1 73 3.17e-21 91.3
MS.gene009591.t1 AT4G02890 56.627 83 36 0 258 340 67 149 1.61e-21 92.0
MS.gene009591.t1 AT4G02890 56.627 83 36 0 258 340 143 225 1.61e-21 92.0
MS.gene009591.t1 AT4G02890 61.644 73 28 0 268 340 1 73 3.17e-21 91.3
MS.gene009591.t1 AT5G37640 56.627 83 36 0 258 340 69 151 2.20e-21 93.6
MS.gene009591.t1 AT5G37640 54.217 83 38 0 258 340 145 227 1.07e-18 85.9
MS.gene009591.t1 AT5G37640 55.682 88 36 2 254 340 219 304 1.51e-17 82.4
MS.gene009591.t1 AT5G37640 53.425 73 34 0 268 340 3 75 7.41e-14 72.0
MS.gene009591.t1 AT5G03240 56.627 83 36 0 258 340 67 149 5.89e-21 92.0
MS.gene009591.t1 AT5G03240 56.627 83 36 0 258 340 143 225 5.89e-21 92.0
MS.gene009591.t1 AT5G03240 56.627 83 36 0 258 340 219 301 5.89e-21 92.0
MS.gene009591.t1 AT5G03240 61.644 73 28 0 268 340 1 73 1.11e-20 91.3
MS.gene009591.t1 AT5G03240 56.627 83 36 0 258 340 67 149 5.89e-21 92.0
MS.gene009591.t1 AT5G03240 56.627 83 36 0 258 340 143 225 5.89e-21 92.0
MS.gene009591.t1 AT5G03240 56.627 83 36 0 258 340 219 301 5.89e-21 92.0
MS.gene009591.t1 AT5G03240 61.644 73 28 0 268 340 1 73 1.11e-20 91.3
MS.gene009591.t1 AT5G03240 56.627 83 36 0 258 340 67 149 5.89e-21 92.0
MS.gene009591.t1 AT5G03240 56.627 83 36 0 258 340 143 225 5.89e-21 92.0
MS.gene009591.t1 AT5G03240 56.627 83 36 0 258 340 219 301 5.89e-21 92.0
MS.gene009591.t1 AT5G03240 61.644 73 28 0 268 340 1 73 1.11e-20 91.3
MS.gene009591.t1 AT5G20620 56.627 83 36 0 258 340 67 149 5.89e-21 92.0
MS.gene009591.t1 AT5G20620 56.627 83 36 0 258 340 143 225 5.89e-21 92.0
MS.gene009591.t1 AT5G20620 56.627 83 36 0 258 340 219 301 5.89e-21 92.0
MS.gene009591.t1 AT5G20620 61.644 73 28 0 268 340 1 73 1.11e-20 91.3
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 67 149 6.48e-21 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 143 225 6.48e-21 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 219 301 6.48e-21 92.0
MS.gene009591.t1 AT4G05320 61.644 73 28 0 268 340 1 73 1.22e-20 91.3
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 67 149 6.48e-21 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 143 225 6.48e-21 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 219 301 6.48e-21 92.0
MS.gene009591.t1 AT4G05320 61.644 73 28 0 268 340 1 73 1.22e-20 91.3
MS.gene009591.t1 AT4G02890 56.627 83 36 0 258 340 67 149 6.48e-21 92.0
MS.gene009591.t1 AT4G02890 56.627 83 36 0 258 340 143 225 6.48e-21 92.0
MS.gene009591.t1 AT4G02890 56.627 83 36 0 258 340 219 301 6.48e-21 92.0
MS.gene009591.t1 AT4G02890 61.644 73 28 0 268 340 1 73 1.22e-20 91.3
MS.gene009591.t1 AT4G02890 56.627 83 36 0 258 340 67 149 6.48e-21 92.0
MS.gene009591.t1 AT4G02890 56.627 83 36 0 258 340 143 225 6.48e-21 92.0
MS.gene009591.t1 AT4G02890 56.627 83 36 0 258 340 219 301 6.48e-21 92.0
MS.gene009591.t1 AT4G02890 61.644 73 28 0 268 340 1 73 1.22e-20 91.3
MS.gene009591.t1 AT1G65350 56.627 83 36 0 258 340 142 224 7.87e-21 92.0
MS.gene009591.t1 AT1G65350 61.644 73 28 0 268 340 1 73 1.65e-20 90.9
MS.gene009591.t1 AT1G65350 55.422 83 36 1 258 340 67 148 5.05e-18 84.0
MS.gene009591.t1 AT1G65350 45.361 97 39 1 258 340 218 314 3.71e-14 72.8
MS.gene009591.t1 AT1G55060 55.422 83 37 0 258 340 67 149 1.04e-20 89.7
MS.gene009591.t1 AT1G55060 54.217 83 38 0 258 340 143 225 4.49e-19 85.1
MS.gene009591.t1 AT1G55060 59.155 71 29 0 268 338 1 71 2.17e-18 83.2
MS.gene009591.t1 AT5G20620 56.627 83 36 0 258 340 67 149 1.47e-20 92.0
MS.gene009591.t1 AT5G20620 56.627 83 36 0 258 340 143 225 1.47e-20 92.0
MS.gene009591.t1 AT5G20620 56.627 83 36 0 258 340 219 301 1.47e-20 92.0
MS.gene009591.t1 AT5G20620 56.627 83 36 0 258 340 295 377 1.47e-20 92.0
MS.gene009591.t1 AT5G20620 61.644 73 28 0 268 340 1 73 2.70e-20 91.3
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 67 149 1.48e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 143 225 1.48e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 219 301 1.48e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 295 377 1.48e-20 92.0
MS.gene009591.t1 AT4G05320 61.644 73 28 0 268 340 1 73 2.72e-20 91.3
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 67 149 1.48e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 143 225 1.48e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 219 301 1.48e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 295 377 1.48e-20 92.0
MS.gene009591.t1 AT4G05320 61.644 73 28 0 268 340 1 73 2.72e-20 91.3
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 67 149 1.48e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 143 225 1.48e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 219 301 1.48e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 295 377 1.48e-20 92.0
MS.gene009591.t1 AT4G05320 61.644 73 28 0 268 340 1 73 2.72e-20 91.3
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 67 149 2.46e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 143 225 2.46e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 219 301 2.46e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 295 377 2.46e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 371 453 2.46e-20 92.0
MS.gene009591.t1 AT4G05320 61.644 73 28 0 268 340 1 73 4.39e-20 91.3
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 67 149 2.46e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 143 225 2.46e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 219 301 2.46e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 295 377 2.46e-20 92.0
MS.gene009591.t1 AT4G05320 56.627 83 36 0 258 340 371 453 2.46e-20 92.0
MS.gene009591.t1 AT4G05320 61.644 73 28 0 268 340 1 73 4.39e-20 91.3
MS.gene009591.t1 AT1G66610 25.092 271 135 7 46 248 64 334 8.35e-19 86.7
MS.gene009591.t1 AT3G09790 54.217 83 38 0 258 340 69 151 2.64e-18 86.3
MS.gene009591.t1 AT3G09790 53.425 73 34 0 268 340 3 75 5.00e-15 76.6
MS.gene009591.t1 AT3G09790 54.795 73 33 0 268 340 552 624 3.55e-14 73.9
MS.gene009591.t1 AT3G09790 57.143 56 24 0 282 337 257 312 2.86e-11 65.1
MS.gene009591.t1 AT3G09790 49.296 71 36 0 268 338 393 463 3.49e-11 64.7
MS.gene009591.t1 AT3G09790 54.217 83 38 0 258 340 69 151 2.64e-18 86.3
MS.gene009591.t1 AT3G09790 53.425 73 34 0 268 340 3 75 5.00e-15 76.6
MS.gene009591.t1 AT3G09790 54.795 73 33 0 268 340 552 624 3.55e-14 73.9
MS.gene009591.t1 AT3G09790 57.143 56 24 0 282 337 257 312 2.86e-11 65.1
MS.gene009591.t1 AT3G09790 49.296 71 36 0 268 338 393 463 3.49e-11 64.7
MS.gene009591.t1 AT2G41980 25.532 235 161 8 48 268 67 301 1.63e-16 79.3
MS.gene009591.t1 AT3G58040 24.719 267 179 10 17 269 47 305 1.84e-16 79.3
MS.gene009591.t1 AT3G58040 24.719 267 179 10 17 269 47 305 1.84e-16 79.3
MS.gene009591.t1 AT1G53930 40.602 133 66 4 213 340 34 158 9.49e-16 74.3
MS.gene009591.t1 AT4G27880 25.847 236 161 7 48 269 74 309 1.49e-15 77.0
MS.gene009591.t1 AT3G61790 25.974 231 155 6 48 262 73 303 3.77e-15 75.9
MS.gene009591.t1 AT3G58040 29.167 120 82 2 48 164 70 189 1.89e-14 72.0
MS.gene009591.t1 AT1G66660 27.461 193 131 6 81 265 25 216 7.19e-14 70.5
MS.gene009591.t1 AT1G53950 39.773 88 49 1 255 338 52 139 1.41e-13 67.8
MS.gene009591.t1 AT5G37900 29.143 175 108 5 85 248 50 219 4.07e-13 68.6

Find 71 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATTCCATTTGGTTATTT+TGG 0.086917 5.3:-61473376 MS.gene009591:CDS
CAGCAACACTCTTTCTCTTT+TGG 0.169048 5.3:+61475352 None:intergenic
CAATAATAGTACTATGCTTT+TGG 0.209912 5.3:-61473557 MS.gene009591:CDS
CTTCTCTTGGATGTTGTAAT+TGG 0.240266 5.3:+61472827 None:intergenic
GTCAAGTATTCCGGTCTTTC+AGG 0.249125 5.3:-61475311 MS.gene009591:intron
GGAGGCAGAGGATGAGGTGG+AGG 0.308775 5.3:+61472799 None:intergenic
CCATGTTACTGTCCCGTTAA+AGG 0.322107 5.3:-61473745 MS.gene009591:CDS
TTTCGTTTGGGCATGGCATT+TGG 0.327374 5.3:+61473836 None:intergenic
TTAGAGAGTCCCCGTGCTTA+TGG 0.337619 5.3:+61473677 None:intergenic
AACAAAATCACAACCTTTAA+CGG 0.356146 5.3:+61473732 None:intergenic
CGGTTATAGTTATGATATAT+TGG 0.367859 5.3:-61473488 MS.gene009591:CDS
GTCTGAACTCTCCACCTTCA+AGG 0.377884 5.3:+61472956 None:intergenic
TGACAGTTGTTCATAAGTTC+AGG 0.387326 5.3:+61473922 None:intergenic
TCAACCATCGTCAAGTATTC+CGG 0.394850 5.3:-61475320 MS.gene009591:CDS
GGTGGAGGGTTGCCTTCTCT+TGG 0.398143 5.3:+61472814 None:intergenic
GTTGCAATTCAGTGTGATAA+TGG 0.413314 5.3:-61473970 MS.gene009591:intron
CAATATATCATAACTATAAC+CGG 0.417047 5.3:+61473489 None:intergenic
GTTCTTCAAGAGGAAAATGA+TGG 0.445710 5.3:-61473595 MS.gene009591:CDS
TGTTGTAATTGGCGAGGGTC+TGG 0.449822 5.3:+61472838 None:intergenic
CCCCGTGCTTATGGTTGAAA+TGG 0.453443 5.3:+61473686 None:intergenic
GAGTTTCTCATGATTCCATT+TGG 0.455953 5.3:-61473385 MS.gene009591:CDS
TCTGAACTCTCCACCTTCAA+GGG 0.459451 5.3:+61472957 None:intergenic
ATCAGACGTTGTTGGTGCAC+TGG 0.461760 5.3:+61472888 None:intergenic
ACAAAATCACAACCTTTAAC+GGG 0.462017 5.3:+61473733 None:intergenic
GGACATTCTTCGGAGAAGAA+TGG 0.465579 5.3:+61473437 None:intergenic
GTAGACCGTTGGACATTCTT+CGG 0.472280 5.3:+61473427 None:intergenic
GTTCATAAGTTCAGGAAAGC+AGG 0.472993 5.3:+61473930 None:intergenic
AAAGGAAATCATCACTTTGA+CGG 0.482225 5.3:+61475375 None:intergenic
CTGAACTCTCCACCTTCAAG+GGG 0.482491 5.3:+61472958 None:intergenic
TCTAGGGGAGGCAGAGGATG+AGG 0.490679 5.3:+61472793 None:intergenic
GAGAAGAATGGAACTTCAGA+TGG 0.491114 5.3:+61473449 None:intergenic
GAAGAACCAAAATAACCAAA+TGG 0.502893 5.3:+61473370 None:intergenic
GAGGCAGAGGATGAGGTGGA+GGG 0.513534 5.3:+61472800 None:intergenic
GCTGTCATCTAGTAGCTCAT+TGG 0.513698 5.3:+61472860 None:intergenic
TTGGATGTTGTAATTGGCGA+GGG 0.519187 5.3:+61472833 None:intergenic
ATATTCATAGCACATGGTTG+TGG 0.520000 5.3:-61472990 MS.gene009591:CDS
GATGTCAACTCTTCTGAGGC+CGG 0.523835 5.3:-61473508 MS.gene009591:CDS
ACCATTTCAACCATAAGCAC+GGG 0.528271 5.3:-61473687 MS.gene009591:CDS
TCAGACGTTGTTGGTGCACT+GGG 0.533496 5.3:+61472889 None:intergenic
GTGCTTATGGTTGAAATGGT+TGG 0.537800 5.3:+61473690 None:intergenic
AGGGGAGGCAGAGGATGAGG+TGG 0.543273 5.3:+61472796 None:intergenic
TGAAGACATTGTTCTTCAAG+AGG 0.545725 5.3:-61473605 MS.gene009591:CDS
TGGCAAACATCAGACGTTGT+TGG 0.553355 5.3:+61472880 None:intergenic
CAAACGCATACCTGAAAGAC+CGG 0.554682 5.3:+61475301 None:intergenic
GAGATCGTTGATTCCGCAGA+AGG 0.557388 5.3:-61475415 MS.gene009591:CDS
CTTGGATGTTGTAATTGGCG+AGG 0.562146 5.3:+61472832 None:intergenic
CAATAAGTCAAAGTGGAAAG+AGG 0.567412 5.3:-61473795 MS.gene009591:CDS
CATTGATGTCAACTCTTCTG+AGG 0.567678 5.3:-61473512 MS.gene009591:CDS
ATGCAAATTTCTAGCTCGAG+TGG 0.567969 5.3:+61473343 None:intergenic
AGAATTCAACGAGACAATGA+AGG 0.570430 5.3:+61473633 None:intergenic
AACCATTTCAACCATAAGCA+CGG 0.578863 5.3:-61473688 MS.gene009591:CDS
TTCTTCAAGAGGAAAATGAT+GGG 0.581764 5.3:-61473594 MS.gene009591:CDS
ATTCTTACTAACACCTTCTG+CGG 0.585365 5.3:+61475402 None:intergenic
ATAGTTATGATATATTGGCT+AGG 0.585445 5.3:-61473483 MS.gene009591:CDS
CCTTTAACGGGACAGTAACA+TGG 0.593119 5.3:+61473745 None:intergenic
TCTACTTCTAGGGGAGGCAG+AGG 0.598133 5.3:+61472787 None:intergenic
GTTGGACAACACTTCTAATG+AGG 0.599282 5.3:+61473708 None:intergenic
CAATTACAACATCCAAGAGA+AGG 0.616839 5.3:-61472826 MS.gene009591:CDS
AAGAATCTTATCCTTCACAT+TGG 0.625557 5.3:+61472926 None:intergenic
GTCTGATCTACTTCTAGGGG+AGG 0.628516 5.3:+61472781 None:intergenic
AGAAGAATGGAACTTCAGAT+GGG 0.634674 5.3:+61473450 None:intergenic
GAGTTGCTGAAGTAGACCGT+TGG 0.646802 5.3:+61473416 None:intergenic
CTTCTCCGAAGAATGTCCAA+CGG 0.662024 5.3:-61473432 MS.gene009591:CDS
GAAGGATAAGATTCTTGACA+AGG 0.663625 5.3:-61472919 MS.gene009591:CDS
AGACACGATAGCCAATGTGA+AGG 0.673184 5.3:-61472937 MS.gene009591:CDS
ATGCAAATATTCATAGCACA+TGG 0.683285 5.3:-61472996 MS.gene009591:CDS
AGGGAGACAATAAGTCAAAG+TGG 0.684751 5.3:-61473802 MS.gene009591:CDS
CCATTTCAACCATAAGCACG+GGG 0.709635 5.3:-61473686 MS.gene009591:CDS
GAAGATAAGAGGTACCTTGG+GGG 0.718323 5.3:+61473318 None:intergenic
TGAACTCTCCACCTTCAAGG+GGG 0.721718 5.3:+61472959 None:intergenic
AAGACCGGAATACTTGACGA+TGG 0.745354 5.3:+61475316 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAATAAAATAAAATA+AGG + chr5.3:61474195-61474214 None:intergenic 0.0%
!! AATAAAATAAAATAAAATAA+GGG + chr5.3:61474194-61474213 None:intergenic 0.0%
!!! CTAAAATATATTTTTTTTGA+GGG - chr5.3:61473061-61473080 MS.gene009591:intron 10.0%
!!! CTCAAAAAAAATATATTTTA+GGG + chr5.3:61473062-61473081 None:intergenic 10.0%
!! AGGGAAAAAAAATAAAAATA+AGG - chr5.3:61473080-61473099 MS.gene009591:intron 15.0%
!! TATAAAAGTTCAAAAATTGA+AGG + chr5.3:61474083-61474102 None:intergenic 15.0%
!!! CCTAAAATATATTTTTTTTG+AGG - chr5.3:61473060-61473079 MS.gene009591:intron 15.0%
!!! CCTCAAAAAAAATATATTTT+AGG + chr5.3:61473063-61473082 None:intergenic 15.0%
!!! TTCATTATTGATTTATTTGT+TGG - chr5.3:61475203-61475222 MS.gene009591:intron 15.0%
!!! TTTTATTTTATTCTACCTAA+TGG - chr5.3:61474212-61474231 MS.gene009591:intron 15.0%
!! AAAAAATAAAAATAAGGCAG+AGG - chr5.3:61473086-61473105 MS.gene009591:intron 20.0%
!! AAAGAAATAACCATAAATTG+AGG + chr5.3:61473010-61473029 None:intergenic 20.0%
!! AAGAAATAACCATAAATTGA+GGG + chr5.3:61473009-61473028 None:intergenic 20.0%
!! AATACTTATTTACTCTACAT+TGG - chr5.3:61474019-61474038 MS.gene009591:intron 20.0%
!! AATGTAGAGTAAATAAGTAT+TGG + chr5.3:61474020-61474039 None:intergenic 20.0%
!! AATTAACCCAAGAAAAATTA+AGG - chr5.3:61473650-61473669 MS.gene009591:CDS 20.0%
!! AATTTAGTGTATTCATGTAT+CGG - chr5.3:61473272-61473291 MS.gene009591:intron 20.0%
!! ATACTTATTTACTCTACATT+GGG - chr5.3:61474020-61474039 MS.gene009591:intron 20.0%
!! CAATATATCATAACTATAAC+CGG + chr5.3:61474750-61474769 None:intergenic 20.0%
!! GTATGAACTAAATGAAATTT+GGG - chr5.3:61473603-61473622 MS.gene009591:CDS 20.0%
!! TGAAAGTCTGAATATTTATA+TGG + chr5.3:61473159-61473178 None:intergenic 20.0%
!! TGTATGAACTAAATGAAATT+TGG - chr5.3:61473602-61473621 MS.gene009591:CDS 20.0%
!!! AATAATAGTACTATGCTTTT+GGG - chr5.3:61474680-61474699 MS.gene009591:intron 20.0%
!!! GAATTTTGTAAGACTATAAT+TGG + chr5.3:61474970-61474989 None:intergenic 20.0%
!!! TATTGACTATTAAAAGTGAT+GGG - chr5.3:61473116-61473135 MS.gene009591:intron 20.0%
!!! TCTCTAATTGAATTTTCTTA+TGG - chr5.3:61474575-61474594 MS.gene009591:intron 20.0%
!!! TGATTTTCTTAAATTATCAG+TGG + chr5.3:61473249-61473268 None:intergenic 20.0%
!!! TTATTGACTATTAAAAGTGA+TGG - chr5.3:61473115-61473134 MS.gene009591:intron 20.0%
!!! TTGTATGATTAGTTTTATGT+TGG - chr5.3:61474122-61474141 MS.gene009591:intron 20.0%
! AAAACAACGAAAGTAATGAA+AGG + chr5.3:61474946-61474965 None:intergenic 25.0%
! AAACAACGAAAGTAATGAAA+GGG + chr5.3:61474945-61474964 None:intergenic 25.0%
! AAATTAGACTTTGAACCATT+AGG + chr5.3:61474230-61474249 None:intergenic 25.0%
! AACAAAATCACAACCTTTAA+CGG + chr5.3:61474507-61474526 None:intergenic 25.0%
! ACTGATCCAAAATTGAAAAA+CGG + chr5.3:61475074-61475093 None:intergenic 25.0%
! AGAAAAAAAACAAAACACCT+TGG + chr5.3:61475177-61475196 None:intergenic 25.0%
! CGGTTATAGTTATGATATAT+TGG - chr5.3:61474748-61474767 MS.gene009591:intron 25.0%
! GAAAAAAAACAAAACACCTT+GGG + chr5.3:61475176-61475195 None:intergenic 25.0%
! TATATGTATTTGTGCTTCAT+TGG + chr5.3:61473195-61473214 None:intergenic 25.0%
!! ATAGTTATGATATATTGGCT+AGG - chr5.3:61474753-61474772 MS.gene009591:intron 25.0%
!! ATCCATCCTTAATTTTTCTT+GGG + chr5.3:61473659-61473678 None:intergenic 25.0%
!! ATGATGATGATGAATATAAG+TGG - chr5.3:61473922-61473941 MS.gene009591:CDS 25.0%
!! ATGATTCCATTTGGTTATTT+TGG - chr5.3:61474860-61474879 MS.gene009591:intron 25.0%
!! CAATAATAGTACTATGCTTT+TGG - chr5.3:61474679-61474698 MS.gene009591:intron 25.0%
!! TATCCATCCTTAATTTTTCT+TGG + chr5.3:61473660-61473679 None:intergenic 25.0%
!!! AAAAAGTGCGATTTTTTGTA+GGG + chr5.3:61473356-61473375 None:intergenic 25.0%
!!! AAGGTGTTTTGTTTTTTTTC+TGG - chr5.3:61475176-61475195 MS.gene009591:intron 25.0%
!!! GATTCTTCTAAAGTGAATAA+AGG + chr5.3:61473740-61473759 None:intergenic 25.0%
!!! GTATGCGTTTGATATTTTTT+AGG - chr5.3:61472947-61472966 MS.gene009591:CDS 25.0%
!!! GTTTGATATTTTTTAGGAGT+GGG - chr5.3:61472953-61472972 MS.gene009591:CDS 25.0%
!!! TAAAAAGTGCGATTTTTTGT+AGG + chr5.3:61473357-61473376 None:intergenic 25.0%
!!! TGTTTTCCGTTTTTCAATTT+TGG - chr5.3:61475065-61475084 MS.gene009591:intron 25.0%
AAAGGAAATCATCACTTTGA+CGG + chr5.3:61472864-61472883 None:intergenic 30.0%
AAATAAGGGATTTCTTTGCT+AGG + chr5.3:61474180-61474199 None:intergenic 30.0%
AACCCAAGAAAAATTAAGGA+TGG - chr5.3:61473654-61473673 MS.gene009591:CDS 30.0%
AAGAATCTTATCCTTCACAT+TGG + chr5.3:61475313-61475332 None:intergenic 30.0%
AAGCTACAATATGAAGAGTT+TGG - chr5.3:61473513-61473532 MS.gene009591:CDS 30.0%
AATGCTAGAAAGAATGTTAC+AGG - chr5.3:61473415-61473434 MS.gene009591:CDS 30.0%
ACAAAATCACAACCTTTAAC+GGG + chr5.3:61474506-61474525 None:intergenic 30.0%
AGAAAGATTCATCACTAATG+AGG - chr5.3:61473871-61473890 MS.gene009591:CDS 30.0%
ATGCAAATATTCATAGCACA+TGG - chr5.3:61475240-61475259 MS.gene009591:intron 30.0%
ATGCTAGAAAGAATGTTACA+GGG - chr5.3:61473416-61473435 MS.gene009591:CDS 30.0%
GAAAACATAACAATCCTCTT+TGG + chr5.3:61475052-61475071 None:intergenic 30.0%
GAAGAACCAAAATAACCAAA+TGG + chr5.3:61474869-61474888 None:intergenic 30.0%
TCTTAAATTATCAGTGGTGT+CGG + chr5.3:61473243-61473262 None:intergenic 30.0%
TTCTTCAAGAGGAAAATGAT+GGG - chr5.3:61474642-61474661 MS.gene009591:intron 30.0%
TTCTTGGGTTAATTAAGCAA+AGG + chr5.3:61473644-61473663 None:intergenic 30.0%
! ACCATAAATTGAGGGTATAT+TGG + chr5.3:61473001-61473020 None:intergenic 30.0%
! AGCTTCTGTATTTTCACATT+GGG + chr5.3:61473498-61473517 None:intergenic 30.0%
! CCATAAATTGAGGGTATATT+GGG + chr5.3:61473000-61473019 None:intergenic 30.0%
! TAGCTTCTGTATTTTCACAT+TGG + chr5.3:61473499-61473518 None:intergenic 30.0%
! TGATGATGAATATAAGTGGT+TGG - chr5.3:61473926-61473945 MS.gene009591:CDS 30.0%
!! TTAGTGTGTGTTTGTTTTCA+TGG + chr5.3:61473565-61473584 None:intergenic 30.0%
!!! CGTTTGATATTTTTTAGGAG+TGG - chr5.3:61472952-61472971 MS.gene009591:CDS 30.0%
!!! CTGATATTTTAGCAAACTTG+TGG + chr5.3:61473695-61473714 None:intergenic 30.0%
!!! GGTGAACAATGTAGTTTTTT+TGG + chr5.3:61473771-61473790 None:intergenic 30.0%
!!! GTGTTTTGTTTTTTTTCTGG+TGG - chr5.3:61475179-61475198 MS.gene009591:intron 30.0%
AAACGAAAAATATGGCTGCA+GGG - chr5.3:61474415-61474434 MS.gene009591:intron 35.0%
AACCATTTCAACCATAAGCA+CGG - chr5.3:61474548-61474567 MS.gene009591:intron 35.0%
AATGAAAGGGAGAAGATAAG+AGG + chr5.3:61474932-61474951 None:intergenic 35.0%
ACAGGGATTAAGCATATGTT+TGG - chr5.3:61473433-61473452 MS.gene009591:CDS 35.0%
AGAAGAATGGAACTTCAGAT+GGG + chr5.3:61474789-61474808 None:intergenic 35.0%
AGAATTCAACGAGACAATGA+AGG + chr5.3:61474606-61474625 None:intergenic 35.0%
AGTTTGGAAAAACATGCGTT+TGG - chr5.3:61473529-61473548 MS.gene009591:CDS 35.0%
ATATTCATAGCACATGGTTG+TGG - chr5.3:61475246-61475265 MS.gene009591:intron 35.0%
ATGTAGACAGCAGAAAAGAA+TGG - chr5.3:61473810-61473829 MS.gene009591:CDS 35.0%
ATTCTTACTAACACCTTCTG+CGG + chr5.3:61472837-61472856 None:intergenic 35.0%
CAATAAGTCAAAGTGGAAAG+AGG - chr5.3:61474441-61474460 MS.gene009591:intron 35.0%
CAATTACAACATCCAAGAGA+AGG - chr5.3:61475410-61475429 MS.gene009591:CDS 35.0%
CCCAATATACCCTCAATTTA+TGG - chr5.3:61472997-61473016 MS.gene009591:CDS 35.0%
CTTCTCTTGGATGTTGTAAT+TGG + chr5.3:61475412-61475431 None:intergenic 35.0%
GAAGGATAAGATTCTTGACA+AGG - chr5.3:61475317-61475336 MS.gene009591:CDS 35.0%
GAGTTTCTCATGATTCCATT+TGG - chr5.3:61474851-61474870 MS.gene009591:intron 35.0%
GGAGATAGTGATTATGTTTG+AGG - chr5.3:61473947-61473966 MS.gene009591:CDS 35.0%
GTATTTGTGCTTCATTGGTA+GGG + chr5.3:61473190-61473209 None:intergenic 35.0%
GTTCTTCAAGAGGAAAATGA+TGG - chr5.3:61474641-61474660 MS.gene009591:intron 35.0%
GTTGCAATTCAGTGTGATAA+TGG - chr5.3:61474266-61474285 MS.gene009591:intron 35.0%
TGAAGACATTGTTCTTCAAG+AGG - chr5.3:61474631-61474650 MS.gene009591:intron 35.0%
TGACAGTTGTTCATAAGTTC+AGG + chr5.3:61474317-61474336 None:intergenic 35.0%
TGTAGACAGCAGAAAAGAAT+GGG - chr5.3:61473811-61473830 MS.gene009591:CDS 35.0%
TGTATTTGTGCTTCATTGGT+AGG + chr5.3:61473191-61473210 None:intergenic 35.0%
! TGCAGCCATATTTTTCGTTT+GGG + chr5.3:61474415-61474434 None:intergenic 35.0%
! TTCTTTTCTGCTGTCTACAT+AGG + chr5.3:61473810-61473829 None:intergenic 35.0%
!! ACACTCTTTCTCTTTTGGAA+AGG + chr5.3:61472882-61472901 None:intergenic 35.0%
!! CAGTTTTTCAAATGCCAAAG+AGG - chr5.3:61475035-61475054 MS.gene009591:intron 35.0%
!! TAAATAAGTATTGGCCTCCA+AGG + chr5.3:61474011-61474030 None:intergenic 35.0%
!! TTTGCAACGTTTTGAGCTAA+CGG + chr5.3:61474354-61474373 None:intergenic 35.0%
ACCATTTCAACCATAAGCAC+GGG - chr5.3:61474549-61474568 MS.gene009591:intron 40.0%
AGAAATTTGCATAACCCCCA+AGG - chr5.3:61474904-61474923 MS.gene009591:intron 40.0%
AGGGAGACAATAAGTCAAAG+TGG - chr5.3:61474434-61474453 MS.gene009591:intron 40.0%
ATGCTTAGATGAGTAAGCCT+TGG - chr5.3:61473991-61474010 MS.gene009591:intron 40.0%
CAAACGAAAAATATGGCTGC+AGG - chr5.3:61474414-61474433 MS.gene009591:intron 40.0%
CATTGATGTCAACTCTTCTG+AGG - chr5.3:61474724-61474743 MS.gene009591:intron 40.0%
CCATGCCCAAACGAAAAATA+TGG - chr5.3:61474407-61474426 MS.gene009591:intron 40.0%
CCCTGATGTGTTGTAATGAA+GGG - chr5.3:61475150-61475169 MS.gene009591:intron 40.0%
CCCTTCATTACAACACATCA+GGG + chr5.3:61475153-61475172 None:intergenic 40.0%
GAGAAGAATGGAACTTCAGA+TGG + chr5.3:61474790-61474809 None:intergenic 40.0%
GGAAACCAACTTGTCTCTAT+AGG - chr5.3:61473837-61473856 MS.gene009591:CDS 40.0%
GTAGACAGCAGAAAAGAATG+GGG - chr5.3:61473812-61473831 MS.gene009591:CDS 40.0%
GTATGCCTATAGAGACAAGT+TGG + chr5.3:61473845-61473864 None:intergenic 40.0%
GTGCTTATGGTTGAAATGGT+TGG + chr5.3:61474549-61474568 None:intergenic 40.0%
GTTCATAAGTTCAGGAAAGC+AGG + chr5.3:61474309-61474328 None:intergenic 40.0%
GTTGGACAACACTTCTAATG+AGG + chr5.3:61474531-61474550 None:intergenic 40.0%
TCAACCATCGTCAAGTATTC+CGG - chr5.3:61472916-61472935 MS.gene009591:CDS 40.0%
TGGAAAAACATGCGTTTGGT+GGG - chr5.3:61473533-61473552 MS.gene009591:CDS 40.0%
TTGGAAAAACATGCGTTTGG+TGG - chr5.3:61473532-61473551 MS.gene009591:CDS 40.0%
TTGGATGTTGTAATTGGCGA+GGG + chr5.3:61475406-61475425 None:intergenic 40.0%
TTGTAGGGACCTATAAAGCA+CGG + chr5.3:61473341-61473360 None:intergenic 40.0%
! CAGCAACACTCTTTCTCTTT+TGG + chr5.3:61472887-61472906 None:intergenic 40.0%
! CCATATTTTTCGTTTGGGCA+TGG + chr5.3:61474410-61474429 None:intergenic 40.0%
! CTGCAGCCATATTTTTCGTT+TGG + chr5.3:61474416-61474435 None:intergenic 40.0%
! GATTTATTTGTTGGCGACTG+CGG - chr5.3:61475212-61475231 MS.gene009591:intron 40.0%
!! AGAAGATAAGAGGTACCTTG+GGG + chr5.3:61474922-61474941 None:intergenic 40.0%
!! ATGCAAATTTCTAGCTCGAG+TGG + chr5.3:61474896-61474915 None:intergenic 40.0%
!! GAGAAGATAAGAGGTACCTT+GGG + chr5.3:61474923-61474942 None:intergenic 40.0%
!! GTGTGTGTTTGTTTTCATGG+TGG + chr5.3:61473562-61473581 None:intergenic 40.0%
!! TTGCAACGTTTTGAGCTAAC+GGG + chr5.3:61474353-61474372 None:intergenic 40.0%
AAGACCGGAATACTTGACGA+TGG + chr5.3:61472923-61472942 None:intergenic 45.0%
AATTAGACGTGTCCCAGTGT+CGG + chr5.3:61473308-61473327 None:intergenic 45.0%
ACAGCAGAAAAGAATGGGGA+GGG - chr5.3:61473816-61473835 MS.gene009591:CDS 45.0%
ACTGGGACACGTCTAATTTG+AGG - chr5.3:61473310-61473329 MS.gene009591:intron 45.0%
AGACACGATAGCCAATGTGA+AGG - chr5.3:61475299-61475318 MS.gene009591:intron 45.0%
ATAGGCACATAAGACGAGGA+GGG + chr5.3:61473792-61473811 None:intergenic 45.0%
CAAACGCATACCTGAAAGAC+CGG + chr5.3:61472938-61472957 None:intergenic 45.0%
CCATGTTACTGTCCCGTTAA+AGG - chr5.3:61474491-61474510 MS.gene009591:intron 45.0%
CCATTTCAACCATAAGCACG+GGG - chr5.3:61474550-61474569 MS.gene009591:intron 45.0%
CCTTTAACGGGACAGTAACA+TGG + chr5.3:61474494-61474513 None:intergenic 45.0%
CTACATAGGCACATAAGACG+AGG + chr5.3:61473796-61473815 None:intergenic 45.0%
CTTAGATGAGTAAGCCTTGG+AGG - chr5.3:61473994-61474013 MS.gene009591:intron 45.0%
CTTCTCCGAAGAATGTCCAA+CGG - chr5.3:61474804-61474823 MS.gene009591:intron 45.0%
CTTGGATGTTGTAATTGGCG+AGG + chr5.3:61475407-61475426 None:intergenic 45.0%
GCCCTGATGTGTTGTAATGA+AGG - chr5.3:61475149-61475168 MS.gene009591:intron 45.0%
GCCCTTCATTACAACACATC+AGG + chr5.3:61475154-61475173 None:intergenic 45.0%
GCTGTCATCTAGTAGCTCAT+TGG + chr5.3:61475379-61475398 None:intergenic 45.0%
GGACATTCTTCGGAGAAGAA+TGG + chr5.3:61474802-61474821 None:intergenic 45.0%
GTAGACCGTTGGACATTCTT+CGG + chr5.3:61474812-61474831 None:intergenic 45.0%
GTCAAGTATTCCGGTCTTTC+AGG - chr5.3:61472925-61472944 MS.gene009591:CDS 45.0%
TCTGAACTCTCCACCTTCAA+GGG + chr5.3:61475282-61475301 None:intergenic 45.0%
TGGCAAACATCAGACGTTGT+TGG + chr5.3:61475359-61475378 None:intergenic 45.0%
TTTCGTTTGGGCATGGCATT+TGG + chr5.3:61474403-61474422 None:intergenic 45.0%
! TTTTCACATTGGGACTGCCT+CGG + chr5.3:61473488-61473507 None:intergenic 45.0%
!! GAAGATAAGAGGTACCTTGG+GGG + chr5.3:61474921-61474940 None:intergenic 45.0%
!! GGAGAAGATAAGAGGTACCT+TGG + chr5.3:61474924-61474943 None:intergenic 45.0%
AAAGATGACCCCCTTGAAGG+TGG - chr5.3:61475269-61475288 MS.gene009591:intron 50.0%
ATCAGACGTTGTTGGTGCAC+TGG + chr5.3:61475351-61475370 None:intergenic 50.0%
CATAGGCACATAAGACGAGG+AGG + chr5.3:61473793-61473812 None:intergenic 50.0%
CCCCGTGCTTATGGTTGAAA+TGG + chr5.3:61474553-61474572 None:intergenic 50.0%
CCTCGGGACGCGAAATTAAA+GGG + chr5.3:61473471-61473490 None:intergenic 50.0%
CTGAACTCTCCACCTTCAAG+GGG + chr5.3:61475281-61475300 None:intergenic 50.0%
GACAGCAGAAAAGAATGGGG+AGG - chr5.3:61473815-61473834 MS.gene009591:CDS 50.0%
GAGTTGCTGAAGTAGACCGT+TGG + chr5.3:61474823-61474842 None:intergenic 50.0%
GTCTGAACTCTCCACCTTCA+AGG + chr5.3:61475283-61475302 None:intergenic 50.0%
GTGTTGTAATGAAGGGCCCA+AGG - chr5.3:61475157-61475176 MS.gene009591:intron 50.0%
TCAGACGTTGTTGGTGCACT+GGG + chr5.3:61475350-61475369 None:intergenic 50.0%
TGAACTCTCCACCTTCAAGG+GGG + chr5.3:61475280-61475299 None:intergenic 50.0%
TGGAAAGATGACCCCCTTGA+AGG - chr5.3:61475266-61475285 MS.gene009591:intron 50.0%
TGTTGTAATTGGCGAGGGTC+TGG + chr5.3:61475401-61475420 None:intergenic 50.0%
TTAGAGAGTCCCCGTGCTTA+TGG + chr5.3:61474562-61474581 None:intergenic 50.0%
TTTCACATTGGGACTGCCTC+GGG + chr5.3:61473487-61473506 None:intergenic 50.0%
!! GAGATCGTTGATTCCGCAGA+AGG - chr5.3:61472821-61472840 MS.gene009591:CDS 50.0%
!! GAGGAGTGTCCGTGCTTTAT+AGG - chr5.3:61473329-61473348 MS.gene009591:intron 50.0%
!! GATGTCAACTCTTCTGAGGC+CGG - chr5.3:61474728-61474747 MS.gene009591:intron 50.0%
GCCTCGGGACGCGAAATTAA+AGG + chr5.3:61473472-61473491 None:intergenic 55.0%
! CCCTTTAATTTCGCGTCCCG+AGG - chr5.3:61473468-61473487 MS.gene009591:CDS 55.0%
GAGGCAGAGGATGAGGTGGA+GGG + chr5.3:61475439-61475458 None:intergenic 60.0%
GGTGGAGGGTTGCCTTCTCT+TGG + chr5.3:61475425-61475444 None:intergenic 60.0%
AGGGGAGGCAGAGGATGAGG+TGG + chr5.3:61475443-61475462 None:intergenic 65.0%
GGAGGCAGAGGATGAGGTGG+AGG + chr5.3:61475440-61475459 None:intergenic 65.0%
!! GTGTCCCAGTGTCGGCGACA+CGG + chr5.3:61473300-61473319 None:intergenic 65.0%
! GGTGCCGTGTCGCCGACACT+GGG - chr5.3:61473293-61473312 MS.gene009591:intron 70.0%
!! CGGTGCCGTGTCGCCGACAC+TGG - chr5.3:61473292-61473311 MS.gene009591:intron 75.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 61472794 61475464 61472794 ID=MS.gene009591
chr5.3 mRNA 61472794 61475464 61472794 ID=MS.gene009591.t1;Parent=MS.gene009591
chr5.3 exon 61475312 61475464 61475312 ID=MS.gene009591.t1.exon1;Parent=MS.gene009591.t1
chr5.3 CDS 61475312 61475464 61475312 ID=cds.MS.gene009591.t1;Parent=MS.gene009591.t1
chr5.3 exon 61473333 61473980 61473333 ID=MS.gene009591.t1.exon2;Parent=MS.gene009591.t1
chr5.3 CDS 61473333 61473980 61473333 ID=cds.MS.gene009591.t1;Parent=MS.gene009591.t1
chr5.3 exon 61472794 61473018 61472794 ID=MS.gene009591.t1.exon3;Parent=MS.gene009591.t1
chr5.3 CDS 61472794 61473018 61472794 ID=cds.MS.gene009591.t1;Parent=MS.gene009591.t1
Gene Sequence

>MS.gene009591

ATGGAGACATGCAACAAAGAAAACGAAGAGATCGTTGATTCCGCAGAAGGTGTTAGTAAGAATAGTTCCGTCAAAGTGATGATTTCCTTTCCAAAAGAGAAAGAGTGTTGCTGCATTTGTCTTCAACCATCGTCAAGTATTCCGGTCTTTCAGGTATGCGTTTGATATTTTTTAGGAGTGGGAAGTGAAGCTCATATGAAAATCCCAATATACCCTCAATTTATGGTTATTTCTTTTGTTTTTTTTGAGCTTTTTTGTTATTTCACCCTAAAATATATTTTTTTTGAGGGAAAAAAAATAAAAATAAGGCAGAGGTAAATATTATTGACTATTAAAAGTGATGGGATAGTTACGTAAATGATCCATATAAATATTCAGACTTTCATTTTTAGTCCCTACCAATGAAGCACAAATACATATACATACACAACACAAACATTAACACGCCGACACCACTGATAATTTAAGAAAATCACACAATTTAGTGTATTCATGTATCGGTGCCGTGTCGCCGACACTGGGACACGTCTAATTTGAGGAGTGTCCGTGCTTTATAGGTCCCTACAAAAAATCGCACTTTTTAGTCTTGTAAAATTTTTTGTCAACATGTATTGCTTTAAAAATGCTAGAAAGAATGTTACAGGGATTAAGCATATGTTTGGATACACGCTGTACCCTTTAATTTCGCGTCCCGAGGCAGTCCCAATGTGAAAATACAGAAGCTACAATATGAAGAGTTTGGAAAAACATGCGTTTGGTGGGTATCCACCATGAAAACAAACACACACTAAAAAGTTATGATTTTTTTTGTATGAACTAAATGAAATTTGGGATATTTAATAGAGATCCTTTGCTTAATTAACCCAAGAAAAATTAAGGATGGATAACATTATAACAACCACAAGTTTGCTAAAATATCAGTCACTTGATTTTCTCACTTTATCCTTTATTCACTTTAGAAGAATCAAATTCAGCCAAAAAAACTACATTGTTCACCCTCCTCGTCTTATGTGCCTATGTAGACAGCAGAAAAGAATGGGGAGGGAAACCAACTTGTCTCTATAGGCATACAAAAGAAGAAAGATTCATCACTAATGAGGACTAGTAGTGAAGAGAATGAGCATGACAATGATGATGATGAATATAAGTGGTTGGAGATAGTGATTATGTTTGAGGAATCAATTTTGTTTATTATAAATGCTTAGATGAGTAAGCCTTGGAGGCCAATACTTATTTACTCTACATTGGGTTTGATATTAATTATGAATGTCTTTAATTTTGTATAACCTTCAATTTTTGAACTTTTATATGTGTACAATATGAACTTCTTGTATGATTAGTTTTATGTTGGTTATACTTTTGATTGCACAACATGCTAACAAACCTAGCAAAGAAATCCCTTATTTTATTTTATTTTATTTTATTTTATTCTACCTAATGGTTCAAAGTCTAATTTGATGACTATCTTTTATGTTGCAATTCAGTGTGATAATGGTCATATTGTTTGCTCTACCTGCTTTCCTGAACTTATGAACAACTGTCACAAGTGCTCATTGCCCGTTAGCTCAAAACGTTGCAAAGTCATTGAGAATATATCGCAATCTATCCAAATGCCATGCCCAAACGAAAAATATGGCTGCAGGGAGACAATAAGTCAAAGTGGAAAGAGGAAACATGAAGAAGAATGCATCTATGTGCCATGTTACTGTCCCGTTAAAGGTTGTGATTTTGTTGCCTCATTAGAAGTGTTGTCCAACCATTTCAACCATAAGCACGGGGACTCTCTAATTGAATTTTCTTATGGTCACTCCTTCATTGTCTCGTTGAATTCTAATGATGAAGACATTGTTCTTCAAGAGGAAAATGATGGGAAACTATTTACTCTCAATAATAGTACTATGCTTTTGGGAAATGCAGTCAATATTAGCTGCATTGATGTCAACTCTTCTGAGGCCGGTTATAGTTATGATATATTGGCTAGGTCTAAGATATCCCATCTGAAGTTCCATTCTTCTCCGAAGAATGTCCAACGGTCTACTTCAGCAACTCTTTCATCAGAGTTTCTCATGATTCCATTTGGTTATTTTGGTTCTTCTAAACCACTCGAGCTAGAAATTTGCATAACCCCCAAGGTACCTCTTATCTTCTCCCTTTCATTACTTTCGTTGTTTTTCCAATTATAGTCTTACAAAATTCTTTCATGTTTCGAATATATACTCTAGCATTTTATCTCAAATTCATCAGTTTTTCAAATGCCAAAGAGGATTGTTATGTTTTCCGTTTTTCAATTTTGGATCAGTTCTTGAAATATCAAAATTAAATTTTCTTTTATTCATTTGATCATGAAATTTGTTTGCCCTGATGTGTTGTAATGAAGGGCCCAAGGTGTTTTGTTTTTTTTCTGGTGGTTTCATTATTGATTTATTTGTTGGCGACTGCGGTGCAGATGCAAATATTCATAGCACATGGTTGTGGAAAGATGACCCCCTTGAAGGTGGAGAGTTCAGACACGATAGCCAATGTGAAGGATAAGATTCTTGACAAGGAAACGATCCCAGTGCACCAACAACGTCTGATGTTTGCCAATGAGCTACTAGATGACAGCCAGACCCTCGCCAATTACAACATCCAAGAGAAGGCAACCCTCCACCTCATCCTCTGCCTCCCCTAG

Protein sequence

>MS.gene009591.t1

METCNKENEEIVDSAEGVSKNSSVKVMISFPKEKECCCICLQPSSSIPVFQCDNGHIVCSTCFPELMNNCHKCSLPVSSKRCKVIENISQSIQMPCPNEKYGCRETISQSGKRKHEEECIYVPCYCPVKGCDFVASLEVLSNHFNHKHGDSLIEFSYGHSFIVSLNSNDEDIVLQEENDGKLFTLNNSTMLLGNAVNISCIDVNSSEAGYSYDILARSKISHLKFHSSPKNVQRSTSATLSSEFLMIPFGYFGSSKPLELEICITPKMQIFIAHGCGKMTPLKVESSDTIANVKDKILDKETIPVHQQRLMFANELLDDSQTLANYNIQEKATLHLILCLP