AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064975


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064975.t1 MTR_1g046640 87.619 315 39 0 1 315 1 315 0.0 561
MS.gene064975.t1 MTR_1g046650 80.317 315 62 0 1 315 32 346 0.0 513
MS.gene064975.t1 MTR_1g046650 80.317 315 62 0 1 315 1 315 0.0 511
MS.gene064975.t1 MTR_5g067400 80.317 315 61 1 1 314 1 315 0.0 510
MS.gene064975.t1 MTR_7g024290 75.079 317 77 2 1 315 1 317 1.55e-169 473
MS.gene064975.t1 MTR_1g046650 78.114 297 65 0 19 315 19 315 6.52e-167 466
MS.gene064975.t1 MTR_7g094390 68.471 314 98 1 3 315 164 477 7.02e-151 432
MS.gene064975.t1 MTR_5g076660 68.889 315 94 2 4 314 26 340 2.78e-149 423
MS.gene064975.t1 MTR_5g076720 65.931 317 104 2 3 315 74 390 3.41e-147 419
MS.gene064975.t1 MTR_5g076520 68.254 315 95 3 1 310 1 315 2.09e-146 415
MS.gene064975.t1 MTR_5g076810 77.612 268 58 2 49 314 2 269 1.17e-144 408
MS.gene064975.t1 MTR_2g038420 64.465 318 107 3 4 315 18 335 2.33e-139 397
MS.gene064975.t1 MTR_2g038430 62.577 326 108 3 4 315 18 343 8.14e-138 394
MS.gene064975.t1 MTR_1g046650 78.049 246 54 0 70 315 1 246 1.78e-136 387
MS.gene064975.t1 MTR_5g076370 62.739 314 112 3 4 312 26 339 8.18e-135 386
MS.gene064975.t1 MTR_5g061290 62.069 319 112 4 4 315 11 327 8.96e-134 383
MS.gene064975.t1 MTR_5g076505 66.553 293 94 2 27 315 23 315 5.83e-132 378
MS.gene064975.t1 MTR_5g076820 71.223 278 73 5 1 273 10 285 2.10e-131 375
MS.gene064975.t1 MTR_5g076540 73.246 228 60 1 1 227 1 228 1.75e-114 331
MS.gene064975.t1 MTR_5g077020 67.677 198 50 5 53 240 17 210 1.77e-80 244
MS.gene064975.t1 MTR_4g094468 50.000 236 112 4 5 236 91 324 7.10e-70 220
MS.gene064975.t1 MTR_4g058025 80.000 115 21 2 81 193 14 128 4.07e-56 180
MS.gene064975.t1 MTR_7g085590 30.198 202 125 5 11 207 63 253 1.21e-24 101
MS.gene064975.t1 MTR_5g092700 62.667 75 28 0 240 314 1 75 1.12e-22 92.4
MS.gene064975.t1 MTR_4g073580 62.667 75 28 0 240 314 1 75 1.12e-22 92.4
MS.gene064975.t1 MTR_7g105080 62.667 75 28 0 240 314 1 75 1.62e-22 91.3
MS.gene064975.t1 MTR_3g092130 62.667 75 28 0 240 314 1 75 1.62e-22 91.3
MS.gene064975.t1 MTR_1g059690 62.667 75 28 0 240 314 1 75 1.62e-22 91.3
MS.gene064975.t1 MTR_4g073580 62.667 75 28 0 240 314 1 75 3.18e-22 92.0
MS.gene064975.t1 MTR_3g092130 62.667 75 28 0 240 314 1 75 3.88e-22 90.5
MS.gene064975.t1 MTR_8g088060 62.667 75 28 0 240 314 1 75 4.80e-22 90.9
MS.gene064975.t1 MTR_7g116360 50.442 113 52 2 206 314 11 123 4.96e-22 94.0
MS.gene064975.t1 MTR_7g116360 62.667 75 28 0 240 314 125 199 3.14e-21 91.7
MS.gene064975.t1 MTR_7g116360 62.667 75 28 0 240 314 201 275 3.14e-21 91.7
MS.gene064975.t1 MTR_5g033960 62.667 75 28 0 240 314 1 75 5.22e-22 90.9
MS.gene064975.t1 MTR_4g088485 62.667 75 28 0 240 314 1 75 7.42e-22 92.0
MS.gene064975.t1 MTR_4g088485 62.667 75 28 0 240 314 138 212 7.42e-22 92.0
MS.gene064975.t1 MTR_4g088485 49.333 75 23 1 240 314 77 136 1.16e-12 66.6
MS.gene064975.t1 MTR_7g116360 62.667 75 28 0 240 314 1 75 8.12e-22 92.0
MS.gene064975.t1 MTR_7g116360 62.667 75 28 0 240 314 77 151 8.12e-22 92.0
MS.gene064975.t1 MTR_7g116360 62.667 75 28 0 240 314 153 227 8.12e-22 92.0
MS.gene064975.t1 MTR_1g066390 62.667 75 28 0 240 314 1 75 8.72e-22 92.0
MS.gene064975.t1 MTR_1g066390 62.667 75 28 0 240 314 77 151 8.72e-22 92.0
MS.gene064975.t1 MTR_1g066390 62.667 75 28 0 240 314 153 227 8.72e-22 92.0
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 1 75 1.88e-21 92.0
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 77 151 1.88e-21 92.0
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 153 227 1.88e-21 92.0
MS.gene064975.t1 MTR_6g061930 62.667 75 28 0 240 314 1 75 2.83e-21 92.0
MS.gene064975.t1 MTR_6g061930 62.667 75 28 0 240 314 77 151 2.83e-21 92.0
MS.gene064975.t1 MTR_6g061930 62.667 75 28 0 240 314 214 288 2.83e-21 92.0
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 1 75 3.04e-21 91.7
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 77 151 3.04e-21 91.7
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 153 227 3.04e-21 91.7
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 1 75 3.24e-21 92.0
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 77 151 3.24e-21 92.0
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 153 227 3.24e-21 92.0
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 229 303 3.24e-21 92.0
MS.gene064975.t1 MTR_4g080920 61.333 75 29 0 240 314 77 151 3.86e-21 90.5
MS.gene064975.t1 MTR_4g080920 61.333 75 29 0 240 314 1 75 8.44e-21 89.4
MS.gene064975.t1 MTR_4g080920 49.333 75 38 0 240 314 153 227 1.09e-13 69.7
MS.gene064975.t1 MTR_4g091580 62.667 75 28 0 240 314 1 75 7.11e-21 92.4
MS.gene064975.t1 MTR_4g091580 62.667 75 28 0 240 314 77 151 7.11e-21 92.4
MS.gene064975.t1 MTR_4g091580 62.667 75 28 0 240 314 153 227 7.11e-21 92.4
MS.gene064975.t1 MTR_4g091580 62.667 75 28 0 240 314 305 379 7.11e-21 92.4
MS.gene064975.t1 MTR_4g091580 61.333 75 29 0 240 314 229 303 2.40e-20 90.9
MS.gene064975.t1 MTR_8g081020 62.667 75 28 0 240 314 1 75 7.11e-21 92.4
MS.gene064975.t1 MTR_8g081020 62.667 75 28 0 240 314 77 151 7.11e-21 92.4
MS.gene064975.t1 MTR_8g081020 62.667 75 28 0 240 314 153 227 7.11e-21 92.4
MS.gene064975.t1 MTR_8g081020 62.667 75 28 0 240 314 229 303 7.11e-21 92.4
MS.gene064975.t1 MTR_8g081020 62.667 75 28 0 240 314 305 379 7.11e-21 92.4
MS.gene064975.t1 MTR_4g080797 62.667 75 28 0 240 314 1 75 7.40e-21 92.0
MS.gene064975.t1 MTR_4g080797 62.667 75 28 0 240 314 77 151 7.40e-21 92.0
MS.gene064975.t1 MTR_4g080797 62.667 75 28 0 240 314 153 227 7.40e-21 92.0
MS.gene064975.t1 MTR_4g080797 62.667 75 28 0 240 314 229 303 7.40e-21 92.0
MS.gene064975.t1 MTR_4g080797 62.667 75 28 0 240 314 305 379 7.40e-21 92.0
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 1 75 7.40e-21 92.0
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 77 151 7.40e-21 92.0
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 153 227 7.40e-21 92.0
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 229 303 7.40e-21 92.0
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 305 379 7.40e-21 92.0
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 1 75 7.47e-21 92.0
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 77 151 7.47e-21 92.0
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 153 227 7.47e-21 92.0
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 229 303 7.47e-21 92.0
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 305 379 7.47e-21 92.0
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 1 75 1.21e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 77 151 1.21e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 153 227 1.21e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 229 303 1.21e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 305 379 1.21e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 381 455 1.21e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 1 75 1.21e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 77 151 1.21e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 153 227 1.21e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 229 303 1.21e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 305 379 1.21e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 381 455 1.21e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 1 75 1.52e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 77 151 1.52e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 153 227 1.52e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 229 303 1.52e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 305 379 1.52e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 381 455 1.52e-20 92.4
MS.gene064975.t1 MTR_8g018230 62.667 75 28 0 240 314 457 531 1.52e-20 92.4
MS.gene064975.t1 MTR_4g091580 62.667 75 28 0 240 314 1 75 1.57e-20 92.4
MS.gene064975.t1 MTR_4g091580 62.667 75 28 0 240 314 77 151 1.57e-20 92.4
MS.gene064975.t1 MTR_4g091580 62.667 75 28 0 240 314 153 227 1.57e-20 92.4
MS.gene064975.t1 MTR_4g091580 62.667 75 28 0 240 314 229 303 1.57e-20 92.4
MS.gene064975.t1 MTR_4g091580 62.667 75 28 0 240 314 381 455 1.57e-20 92.4
MS.gene064975.t1 MTR_4g091580 62.667 75 28 0 240 314 457 531 1.57e-20 92.4
MS.gene064975.t1 MTR_4g091580 61.333 75 29 0 240 314 305 379 1.67e-19 89.4
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 1 75 1.58e-20 92.0
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 77 151 1.58e-20 92.0
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 153 227 1.58e-20 92.0
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 229 303 1.58e-20 92.0
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 305 379 1.58e-20 92.0
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 381 455 1.58e-20 92.0
MS.gene064975.t1 MTR_4g081010 62.667 75 28 0 240 314 457 531 1.58e-20 92.0
MS.gene064975.t1 MTR_4g088495 62.667 75 28 0 240 314 77 151 1.90e-20 92.4
MS.gene064975.t1 MTR_4g088495 62.667 75 28 0 240 314 153 227 1.90e-20 92.4
MS.gene064975.t1 MTR_4g088495 62.667 75 28 0 240 314 229 303 1.90e-20 92.4
MS.gene064975.t1 MTR_4g088495 62.667 75 28 0 240 314 305 379 1.90e-20 92.4
MS.gene064975.t1 MTR_4g088495 62.667 75 28 0 240 314 381 455 1.90e-20 92.4
MS.gene064975.t1 MTR_4g088495 62.667 75 28 0 240 314 457 531 1.90e-20 92.4
MS.gene064975.t1 MTR_4g088495 62.667 75 28 0 240 314 533 607 1.90e-20 92.4
MS.gene064975.t1 MTR_4g088495 62.667 75 28 0 240 314 609 683 1.90e-20 92.4
MS.gene064975.t1 MTR_4g088495 62.667 75 28 0 240 314 685 759 1.90e-20 92.4
MS.gene064975.t1 MTR_4g088495 62.667 75 28 0 240 314 761 835 1.90e-20 92.4
MS.gene064975.t1 MTR_4g088495 62.667 75 28 0 240 314 1 75 2.20e-20 92.0
MS.gene064975.t1 MTR_4g009980 57.971 69 29 0 247 315 3 71 4.38e-20 82.8
MS.gene064975.t1 MTR_1g054335 27.016 248 163 7 11 240 58 305 1.59e-19 87.4
MS.gene064975.t1 MTR_8g479250 58.824 85 35 0 230 314 131 215 2.63e-19 86.7
MS.gene064975.t1 MTR_8g479250 48.780 82 31 1 230 311 207 277 2.89e-12 66.6
MS.gene064975.t1 MTR_3g017590 26.291 213 140 6 11 209 53 262 5.65e-19 85.9
MS.gene064975.t1 MTR_8g027520 29.187 209 137 6 11 208 53 261 7.34e-19 85.9
MS.gene064975.t1 MTR_8g027520 29.187 209 137 6 11 208 44 252 8.50e-19 85.5
MS.gene064975.t1 MTR_8g038370 28.095 210 140 6 11 209 112 321 1.07e-18 85.9
MS.gene064975.t1 MTR_3g091510 29.187 209 137 6 11 208 60 268 2.57e-18 84.3
MS.gene064975.t1 MTR_7g093600 27.049 244 158 7 11 234 59 302 3.47e-18 83.6
MS.gene064975.t1 MTR_5g076350 50.649 77 37 1 240 315 8 84 3.67e-18 78.2
MS.gene064975.t1 MTR_1g008120 28.230 209 139 6 11 208 68 276 1.17e-17 82.4
MS.gene064975.t1 MTR_5g076740 53.947 76 34 1 240 314 86 161 5.68e-17 77.4
MS.gene064975.t1 MTR_5g061310 51.316 76 37 0 240 315 2 77 1.15e-16 73.9
MS.gene064975.t1 MTR_5g076760 61.818 55 21 0 253 307 8 62 2.15e-16 73.6
MS.gene064975.t1 MTR_7g117415 26.728 217 148 5 3 208 53 269 6.95e-16 77.4
MS.gene064975.t1 MTR_5g076780 62.500 48 18 0 253 300 3 50 2.31e-13 64.7
MS.gene064975.t1 MTR_5g076340 47.436 78 39 2 240 315 9 86 3.33e-13 64.7
MS.gene064975.t1 MTR_7g085080 52.727 55 26 0 240 294 9 63 7.07e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064975.t1 AT5G37930 39.744 234 136 3 8 236 107 340 7.09e-52 174
MS.gene064975.t1 AT5G37870 33.333 225 144 5 5 223 36 260 3.23e-37 134
MS.gene064975.t1 AT1G66620 33.617 235 146 5 11 236 41 274 8.95e-37 134
MS.gene064975.t1 AT5G37890 34.649 228 136 5 5 223 42 265 3.42e-35 129
MS.gene064975.t1 AT1G66650 32.773 238 148 5 11 236 83 320 8.96e-35 129
MS.gene064975.t1 AT1G66630 32.540 252 143 6 11 236 46 296 4.19e-34 127
MS.gene064975.t1 AT1G66660 33.065 248 153 7 2 237 94 340 8.14e-32 122
MS.gene064975.t1 AT5G37910 32.159 227 147 4 4 223 28 254 5.10e-31 118
MS.gene064975.t1 AT5G62800 36.559 186 111 5 11 189 40 225 3.33e-29 114
MS.gene064975.t1 AT5G62800 36.559 186 111 5 11 189 40 225 3.59e-29 114
MS.gene064975.t1 AT2G35635 62.667 75 28 0 240 314 1 75 1.32e-22 92.4
MS.gene064975.t1 AT1G31340 62.667 75 28 0 240 314 1 75 1.59e-22 92.0
MS.gene064975.t1 AT4G05050 62.667 75 28 0 240 314 1 75 1.66e-22 92.0
MS.gene064975.t1 AT4G05050 62.667 75 28 0 240 314 77 151 1.66e-22 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 1 75 1.66e-22 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 77 151 1.66e-22 92.0
MS.gene064975.t1 AT3G52590 62.667 75 28 0 240 314 1 75 2.09e-22 90.9
MS.gene064975.t1 AT2G36170 62.667 75 28 0 240 314 1 75 2.09e-22 90.9
MS.gene064975.t1 AT3G62250 62.667 75 28 0 240 314 1 75 3.96e-22 91.3
MS.gene064975.t1 AT1G65350 62.667 75 28 0 240 314 152 226 3.99e-22 95.1
MS.gene064975.t1 AT1G65350 62.667 75 28 0 240 314 1 75 3.62e-21 92.4
MS.gene064975.t1 AT1G65350 61.333 75 28 1 240 314 77 150 2.13e-18 84.3
MS.gene064975.t1 AT1G65350 49.438 89 31 1 240 314 228 316 6.49e-15 74.7
MS.gene064975.t1 AT2G47110 62.667 75 28 0 240 314 1 75 4.13e-22 91.3
MS.gene064975.t1 AT2G47110 62.667 75 28 0 240 314 1 75 4.13e-22 91.3
MS.gene064975.t1 AT1G23410 62.667 75 28 0 240 314 1 75 4.47e-22 90.9
MS.gene064975.t1 AT4G05050 62.667 75 28 0 240 314 1 75 8.50e-22 92.0
MS.gene064975.t1 AT4G05050 62.667 75 28 0 240 314 77 151 8.50e-22 92.0
MS.gene064975.t1 AT4G05050 62.667 75 28 0 240 314 153 227 8.50e-22 92.0
MS.gene064975.t1 AT4G05050 62.667 75 28 0 240 314 1 75 8.50e-22 92.0
MS.gene064975.t1 AT4G05050 62.667 75 28 0 240 314 77 151 8.50e-22 92.0
MS.gene064975.t1 AT4G05050 62.667 75 28 0 240 314 153 227 8.50e-22 92.0
MS.gene064975.t1 AT4G05050 62.667 75 28 0 240 314 1 75 8.50e-22 92.0
MS.gene064975.t1 AT4G05050 62.667 75 28 0 240 314 77 151 8.50e-22 92.0
MS.gene064975.t1 AT4G05050 62.667 75 28 0 240 314 153 227 8.50e-22 92.0
MS.gene064975.t1 AT4G02890 62.667 75 28 0 240 314 1 75 8.50e-22 92.0
MS.gene064975.t1 AT4G02890 62.667 75 28 0 240 314 77 151 8.50e-22 92.0
MS.gene064975.t1 AT4G02890 62.667 75 28 0 240 314 153 227 8.50e-22 92.0
MS.gene064975.t1 AT4G02890 62.667 75 28 0 240 314 1 75 8.50e-22 92.0
MS.gene064975.t1 AT4G02890 62.667 75 28 0 240 314 77 151 8.50e-22 92.0
MS.gene064975.t1 AT4G02890 62.667 75 28 0 240 314 153 227 8.50e-22 92.0
MS.gene064975.t1 AT5G03240 62.667 75 28 0 240 314 1 75 2.99e-21 92.4
MS.gene064975.t1 AT5G03240 62.667 75 28 0 240 314 77 151 2.99e-21 92.4
MS.gene064975.t1 AT5G03240 62.667 75 28 0 240 314 153 227 2.99e-21 92.4
MS.gene064975.t1 AT5G03240 62.667 75 28 0 240 314 229 303 2.99e-21 92.4
MS.gene064975.t1 AT5G03240 62.667 75 28 0 240 314 1 75 2.99e-21 92.4
MS.gene064975.t1 AT5G03240 62.667 75 28 0 240 314 77 151 2.99e-21 92.4
MS.gene064975.t1 AT5G03240 62.667 75 28 0 240 314 153 227 2.99e-21 92.4
MS.gene064975.t1 AT5G03240 62.667 75 28 0 240 314 229 303 2.99e-21 92.4
MS.gene064975.t1 AT5G03240 62.667 75 28 0 240 314 1 75 2.99e-21 92.4
MS.gene064975.t1 AT5G03240 62.667 75 28 0 240 314 77 151 2.99e-21 92.4
MS.gene064975.t1 AT5G03240 62.667 75 28 0 240 314 153 227 2.99e-21 92.4
MS.gene064975.t1 AT5G03240 62.667 75 28 0 240 314 229 303 2.99e-21 92.4
MS.gene064975.t1 AT5G20620 62.667 75 28 0 240 314 1 75 2.99e-21 92.4
MS.gene064975.t1 AT5G20620 62.667 75 28 0 240 314 77 151 2.99e-21 92.4
MS.gene064975.t1 AT5G20620 62.667 75 28 0 240 314 153 227 2.99e-21 92.4
MS.gene064975.t1 AT5G20620 62.667 75 28 0 240 314 229 303 2.99e-21 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 1 75 3.13e-21 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 77 151 3.13e-21 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 153 227 3.13e-21 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 229 303 3.13e-21 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 1 75 3.13e-21 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 77 151 3.13e-21 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 153 227 3.13e-21 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 229 303 3.13e-21 92.4
MS.gene064975.t1 AT4G02890 62.667 75 28 0 240 314 1 75 3.13e-21 92.4
MS.gene064975.t1 AT4G02890 62.667 75 28 0 240 314 77 151 3.13e-21 92.4
MS.gene064975.t1 AT4G02890 62.667 75 28 0 240 314 153 227 3.13e-21 92.4
MS.gene064975.t1 AT4G02890 62.667 75 28 0 240 314 229 303 3.13e-21 92.4
MS.gene064975.t1 AT4G02890 62.667 75 28 0 240 314 1 75 3.13e-21 92.4
MS.gene064975.t1 AT4G02890 62.667 75 28 0 240 314 77 151 3.13e-21 92.4
MS.gene064975.t1 AT4G02890 62.667 75 28 0 240 314 153 227 3.13e-21 92.4
MS.gene064975.t1 AT4G02890 62.667 75 28 0 240 314 229 303 3.13e-21 92.4
MS.gene064975.t1 AT1G55060 61.333 75 29 0 240 314 77 151 3.65e-21 90.5
MS.gene064975.t1 AT1G55060 58.667 75 31 0 240 314 1 75 1.85e-19 85.9
MS.gene064975.t1 AT1G55060 60.000 75 30 0 240 314 153 227 2.88e-19 85.5
MS.gene064975.t1 AT5G20620 62.667 75 28 0 240 314 1 75 7.23e-21 92.4
MS.gene064975.t1 AT5G20620 62.667 75 28 0 240 314 77 151 7.23e-21 92.4
MS.gene064975.t1 AT5G20620 62.667 75 28 0 240 314 153 227 7.23e-21 92.4
MS.gene064975.t1 AT5G20620 62.667 75 28 0 240 314 229 303 7.23e-21 92.4
MS.gene064975.t1 AT5G20620 62.667 75 28 0 240 314 305 379 7.23e-21 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 1 75 7.75e-21 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 77 151 7.75e-21 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 153 227 7.75e-21 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 229 303 7.75e-21 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 305 379 7.75e-21 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 1 75 7.75e-21 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 77 151 7.75e-21 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 153 227 7.75e-21 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 229 303 7.75e-21 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 305 379 7.75e-21 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 1 75 7.75e-21 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 77 151 7.75e-21 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 153 227 7.75e-21 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 229 303 7.75e-21 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 305 379 7.75e-21 92.0
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 1 75 1.27e-20 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 77 151 1.27e-20 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 153 227 1.27e-20 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 229 303 1.27e-20 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 305 379 1.27e-20 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 381 455 1.27e-20 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 1 75 1.27e-20 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 77 151 1.27e-20 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 153 227 1.27e-20 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 229 303 1.27e-20 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 305 379 1.27e-20 92.4
MS.gene064975.t1 AT4G05320 62.667 75 28 0 240 314 381 455 1.27e-20 92.4
MS.gene064975.t1 AT5G37640 55.294 85 38 0 230 314 69 153 2.77e-20 89.7
MS.gene064975.t1 AT5G37640 60.000 75 30 0 240 314 155 229 2.04e-18 84.7
MS.gene064975.t1 AT5G37640 59.211 76 30 1 240 314 231 306 1.49e-17 82.0
MS.gene064975.t1 AT5G37640 52.000 75 36 0 240 314 3 77 6.35e-13 68.9
MS.gene064975.t1 AT3G09790 60.000 75 30 0 240 314 3 77 2.01e-18 86.3
MS.gene064975.t1 AT3G09790 60.000 75 30 0 240 314 79 153 9.46e-18 84.3
MS.gene064975.t1 AT3G09790 57.534 73 31 0 240 312 552 624 1.91e-15 77.4
MS.gene064975.t1 AT3G09790 48.193 83 36 2 240 315 155 237 3.65e-12 67.4
MS.gene064975.t1 AT3G09790 50.667 75 35 1 240 312 319 393 6.52e-11 63.5
MS.gene064975.t1 AT3G09790 60.000 75 30 0 240 314 3 77 2.01e-18 86.3
MS.gene064975.t1 AT3G09790 60.000 75 30 0 240 314 79 153 9.46e-18 84.3
MS.gene064975.t1 AT3G09790 57.534 73 31 0 240 312 552 624 1.91e-15 77.4
MS.gene064975.t1 AT3G09790 48.193 83 36 2 240 315 155 237 3.65e-12 67.4
MS.gene064975.t1 AT3G09790 50.667 75 35 1 240 312 319 393 6.52e-11 63.5
MS.gene064975.t1 AT3G61790 27.650 217 146 6 3 208 52 268 1.37e-17 82.4
MS.gene064975.t1 AT2G41980 26.210 248 165 8 11 240 54 301 1.46e-17 82.0
MS.gene064975.t1 AT3G58040 26.210 248 165 8 11 240 57 304 2.32e-17 81.3
MS.gene064975.t1 AT3G58040 26.210 248 165 8 11 240 57 304 2.32e-17 81.3
MS.gene064975.t1 AT4G27880 27.751 209 140 6 11 208 61 269 1.24e-16 79.7
MS.gene064975.t1 AT1G53930 54.795 73 33 0 240 312 86 158 2.05e-16 75.9
MS.gene064975.t1 AT1G66610 26.950 282 137 9 11 223 53 334 2.06e-16 79.3
MS.gene064975.t1 AT3G58040 31.579 133 87 3 11 139 57 189 6.13e-15 73.2
MS.gene064975.t1 AT1G66660 29.534 193 123 7 57 237 25 216 1.51e-14 72.0
MS.gene064975.t1 AT1G66610 49.254 67 34 0 11 77 158 224 7.54e-13 67.4
MS.gene064975.t1 AT1G66610 51.613 62 30 0 11 72 53 114 2.18e-12 66.2
MS.gene064975.t1 AT1G53950 40.217 92 51 1 227 314 52 143 8.58e-13 65.5

Find 62 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAGAATCCCTATGTTTA+TGG 0.123239 1.4:-31237095 None:intergenic
CTTAACTATTCCCATCTTTC+AGG 0.143964 1.4:+31235135 MS.gene064975:CDS
TTGCAGCAATCAAGCAAATA+AGG 0.243120 1.4:-31235100 None:intergenic
CAATAATAGAAGTATGCTTT+TGG 0.263192 1.4:+31237215 MS.gene064975:CDS
GCAGACTTTGCTGGTGTATT+GGG 0.317374 1.4:-31237791 None:intergenic
CTTATCTTGGATGTTGTAAT+CGG 0.333825 1.4:-31237853 None:intergenic
CTGAAAGATGGGAATAGTTA+AGG 0.340707 1.4:-31235134 None:intergenic
CGACTATAGTTATGATATAT+TGG 0.341944 1.4:+31237284 MS.gene064975:CDS
CATGGTTGCAAGGAGAAAAT+AGG 0.344263 1.4:+31236964 MS.gene064975:CDS
AGCAGACTTTGCTGGTGTAT+TGG 0.350572 1.4:-31237792 None:intergenic
AGAAAATAGGTTACACTGAT+AGG 0.361527 1.4:+31236977 MS.gene064975:CDS
CGTCGAGGGTTGACTTATCT+TGG 0.363314 1.4:-31237866 None:intergenic
CCCTATGTTTATGGCTGAAA+TGG 0.372935 1.4:-31237086 None:intergenic
GAAAGACTGTAATTTCAGTT+TGG 0.382222 1.4:-31237322 None:intergenic
GGTTTCATCATTAGACTTCA+AGG 0.410456 1.4:-31237151 None:intergenic
CGCAAAAGAGCAGACTTTGC+TGG 0.415609 1.4:-31237800 None:intergenic
GAGTTTCTCGTGATTCCATT+TGG 0.442457 1.4:+31237387 MS.gene064975:CDS
TGAAAGATGGGAATAGTTAA+GGG 0.445438 1.4:-31235133 None:intergenic
TGTTGTAATCGGCAAGGGTC+AGG 0.453876 1.4:-31237842 None:intergenic
GCAGTCAATCTTTGCTGCAT+TGG 0.459248 1.4:+31237243 MS.gene064975:CDS
GTCTGAACTCTCAACCCTCA+GGG 0.464707 1.4:-31237724 None:intergenic
TGAAATGCATACCTGAAAGA+TGG 0.465935 1.4:-31235146 None:intergenic
TGTCTGAACTCTCAACCCTC+AGG 0.472601 1.4:-31237725 None:intergenic
TAGTCGGACTCAGAAGAGTT+AGG 0.480424 1.4:-31237267 None:intergenic
TTTCGTGAAGAACGTCCAAC+AGG 0.481416 1.4:+31237341 MS.gene064975:CDS
AGCAAAGTCACATCCTGAAA+GGG 0.487737 1.4:-31237040 None:intergenic
TGCAGCAATCAAGCAAATAA+GGG 0.489963 1.4:-31235099 None:intergenic
ATCTACATAGCAACCCAGAC+TGG 0.496234 1.4:+31237690 MS.gene064975:CDS
CTACCTGCTGTACTAAACTT+AGG 0.496282 1.4:+31236842 MS.gene064975:CDS
ATTCCTAAGTTTAGTACAGC+AGG 0.503985 1.4:-31236845 None:intergenic
GGGGTGCGTCATTCCAGTCT+GGG 0.506680 1.4:-31237703 None:intergenic
AGAGGTTCAGAAGAACCAAA+TGG 0.514036 1.4:-31237402 None:intergenic
ATAAGGGTCAGAAATAATCA+AGG 0.516830 1.4:-31235083 None:intergenic
CCATTTCAGCCATAAACATA+GGG 0.526155 1.4:+31237086 MS.gene064975:CDS
GCAAAGTCACATCCTGAAAG+GGG 0.530762 1.4:-31237039 None:intergenic
GAAATGCATACCTGAAAGAT+GGG 0.530956 1.4:-31235145 None:intergenic
ACCATTTCAGCCATAAACAT+AGG 0.540144 1.4:+31237085 MS.gene064975:CDS
ACGTCTTCCTCCGTATGAGT+GGG 0.546503 1.4:+31237886 MS.gene064975:CDS
CAGCAAAGTCACATCCTGAA+AGG 0.549420 1.4:-31237041 None:intergenic
TCTGATGAAAGAGTTGCTAA+AGG 0.550142 1.4:-31237366 None:intergenic
GACGTCTTCCTCCGTATGAG+TGG 0.561351 1.4:+31237885 MS.gene064975:CDS
CTTGGATGTTGTAATCGGCA+AGG 0.566692 1.4:-31237848 None:intergenic
TTGGATGTTGTAATCGGCAA+GGG 0.571746 1.4:-31237847 None:intergenic
TCATCTAGTCCCCACTCATA+CGG 0.575114 1.4:-31237896 None:intergenic
ATGCAAATATCTAGCTTGAG+AGG 0.582537 1.4:-31237420 None:intergenic
ATGTTTATGGCTGAAATGGT+TGG 0.586242 1.4:-31237082 None:intergenic
CAATATATCATAACTATAGT+CGG 0.587091 1.4:-31237283 None:intergenic
ATAGTTATGATATATTGGCT+AGG 0.588752 1.4:+31237289 MS.gene064975:CDS
CTGAACTCTCAACCCTCAGG+GGG 0.590897 1.4:-31237722 None:intergenic
TCTGAACTCTCAACCCTCAG+GGG 0.601288 1.4:-31237723 None:intergenic
GAATGCAAAACATGGTTGCA+AGG 0.607126 1.4:+31236954 MS.gene064975:CDS
AGACTTCAAGGAGACAATGA+AGG 0.608582 1.4:-31237139 None:intergenic
GAAGAAAATGATTCATGACA+AGG 0.632047 1.4:+31237761 MS.gene064975:CDS
TCTAGTCCCCACTCATACGG+AGG 0.643078 1.4:-31237893 None:intergenic
TAAGGGTCAGAAATAATCAA+GGG 0.655042 1.4:-31235082 None:intergenic
CGTCTTCCTCCGTATGAGTG+GGG 0.655237 1.4:+31237887 MS.gene064975:CDS
CATACGGAGGAAGACGTCGA+GGG 0.663639 1.4:-31237880 None:intergenic
TCATGTTCGAATGCAAAACA+TGG 0.669361 1.4:+31236946 MS.gene064975:CDS
CAAAGTCACATCCTGAAAGG+GGG 0.676119 1.4:-31237038 None:intergenic
GAGTTGCTAAAGGAACCTGT+TGG 0.678882 1.4:-31237356 None:intergenic
TCATACGGAGGAAGACGTCG+AGG 0.682545 1.4:-31237881 None:intergenic
GGAAATAGGAGGTACCCTGG+GGG 0.758499 1.4:-31237445 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTCTTTATTGATTTAA+TGG + chr1.4:31237648-31237667 MS.gene064975:intron 10.0%
!!! ATCTTTAATTTTCTAATTAT+TGG - chr1.4:31236119-31236138 None:intergenic 10.0%
!!! GTTTAAAATATCAAAATAAT+GGG - chr1.4:31235678-31235697 None:intergenic 10.0%
!!! TGTTTAAAATATCAAAATAA+TGG - chr1.4:31235679-31235698 None:intergenic 10.0%
!! AAATTAAAGATGAATATTAG+AGG + chr1.4:31236128-31236147 MS.gene064975:intron 15.0%
!! AATAATAACAAAACTTTAAC+CGG - chr1.4:31237496-31237515 None:intergenic 15.0%
!! TTTAAACAACTTATACATAT+TGG + chr1.4:31235338-31235357 MS.gene064975:intron 15.0%
!!! TATGGTATTGAATAATTTTT+TGG - chr1.4:31235569-31235588 None:intergenic 15.0%
!! AAGACTTATTTGCTTTAATT+GGG + chr1.4:31236448-31236467 MS.gene064975:intron 20.0%
!! ATAATAACAAAACTTTAACC+GGG - chr1.4:31237495-31237514 None:intergenic 20.0%
!! ATCCGCTAAAATAAAAAATA+AGG - chr1.4:31235787-31235806 None:intergenic 20.0%
!! ATGATACTATCTTAGAATTT+GGG + chr1.4:31235984-31236003 MS.gene064975:intron 20.0%
!! CAATATATCATAACTATAGT+CGG - chr1.4:31237286-31237305 None:intergenic 20.0%
!! CATAAAAACTAAAAAACAGA+AGG - chr1.4:31236539-31236558 None:intergenic 20.0%
!! TAAAATAAAAAATAAGGGAC+CGG - chr1.4:31235781-31235800 None:intergenic 20.0%
!! TAAGACTTATTTGCTTTAAT+TGG + chr1.4:31236447-31236466 MS.gene064975:intron 20.0%
!! TATGATACTATCTTAGAATT+TGG + chr1.4:31235983-31236002 MS.gene064975:intron 20.0%
!! TCCGCTAAAATAAAAAATAA+GGG - chr1.4:31235786-31235805 None:intergenic 20.0%
!! TTATTCAATACCATAAAGTT+TGG + chr1.4:31235574-31235593 MS.gene064975:intron 20.0%
!! TTTGAATATTACAAGTTACA+AGG + chr1.4:31236472-31236491 MS.gene064975:intron 20.0%
!!! AAACTTTTTGTTTTGTAGTT+TGG + chr1.4:31235292-31235311 MS.gene064975:intron 20.0%
!!! AATAATAGAAGTATGCTTTT+GGG + chr1.4:31237216-31237235 MS.gene064975:CDS 20.0%
!!! ACTTTTGTTTGATATGTAAA+AGG + chr1.4:31235223-31235242 MS.gene064975:intron 20.0%
!!! GTATTGAATAATTTTTTGGT+GGG - chr1.4:31235565-31235584 None:intergenic 20.0%
!!! TCCCTTATTTTTTATTTTAG+CGG + chr1.4:31235782-31235801 MS.gene064975:intron 20.0%
!!! TCTCAAATCAAATTTTCTTA+TGG + chr1.4:31237111-31237130 MS.gene064975:CDS 20.0%
!!! TTTTGTTTCTTTTAAATGCT+TGG + chr1.4:31236399-31236418 MS.gene064975:intron 20.0%
! AAAAAACCAAAGCATAGAAA+AGG - chr1.4:31237469-31237488 None:intergenic 25.0%
! AAAATACGAGATTTCTTTGT+TGG - chr1.4:31236730-31236749 None:intergenic 25.0%
! CGACTATAGTTATGATATAT+TGG + chr1.4:31237284-31237303 MS.gene064975:CDS 25.0%
! CTAAATATGAGTATACATGT+GGG - chr1.4:31236032-31236051 None:intergenic 25.0%
! GAGAATGATTAACTTTATGT+TGG + chr1.4:31236677-31236696 MS.gene064975:intron 25.0%
! TAAATATGAGTATACATGTG+GGG - chr1.4:31236031-31236050 None:intergenic 25.0%
! TAATAACAAAACTTTAACCG+GGG - chr1.4:31237494-31237513 None:intergenic 25.0%
!! ATAGTTATGATATATTGGCT+AGG + chr1.4:31237289-31237308 MS.gene064975:CDS 25.0%
!! ATCCTCTAAAAAATGAAGAT+AGG + chr1.4:31235370-31235389 MS.gene064975:intron 25.0%
!! ATTTTTCTCTTGAAGAACAA+TGG - chr1.4:31237175-31237194 None:intergenic 25.0%
!! CTGTTAGTGTTTTCTATTTT+TGG + chr1.4:31237601-31237620 MS.gene064975:intron 25.0%
!! TGGTAGACAAAACATTATTT+TGG + chr1.4:31235312-31235331 MS.gene064975:intron 25.0%
!!! AAAGTAATGTCGTTTTTTAG+AGG - chr1.4:31236220-31236239 None:intergenic 25.0%
!!! CAATAATAGAAGTATGCTTT+TGG + chr1.4:31237215-31237234 MS.gene064975:CDS 25.0%
!!! GGTATTGAATAATTTTTTGG+TGG - chr1.4:31235566-31235585 None:intergenic 25.0%
!!! TTGATTTGTAAAACTGTTTC+TGG + chr1.4:31235419-31235438 MS.gene064975:intron 25.0%
AAAATCCATGTACTCAATGA+CGG - chr1.4:31236643-31236662 None:intergenic 30.0%
AGAAAATAGGTTACACTGAT+AGG + chr1.4:31236977-31236996 MS.gene064975:CDS 30.0%
AGAGATAGTGATTCTGTTTA+AGG + chr1.4:31236370-31236389 MS.gene064975:intron 30.0%
ATAAGGGTCAGAAATAATCA+AGG - chr1.4:31235086-31235105 None:intergenic 30.0%
CAAAGCATAGAAAAGGAAAT+AGG - chr1.4:31237462-31237481 None:intergenic 30.0%
CAAATCAAACACATTACAAC+TGG + chr1.4:31235744-31235763 MS.gene064975:intron 30.0%
CCACATGTATACTCATATTT+AGG + chr1.4:31236030-31236049 MS.gene064975:intron 30.0%
CCTAAATATGAGTATACATG+TGG - chr1.4:31236033-31236052 None:intergenic 30.0%
CTTATCTTGGATGTTGTAAT+CGG - chr1.4:31237856-31237875 None:intergenic 30.0%
GAAAGACTGTAATTTCAGTT+TGG - chr1.4:31237325-31237344 None:intergenic 30.0%
GAAGAAAATGATTCATGACA+AGG + chr1.4:31237761-31237780 MS.gene064975:CDS 30.0%
GTAACTCTGATAAGAGTTAA+GGG + chr1.4:31235199-31235218 MS.gene064975:intron 30.0%
GTTCTTCAAGAGAAAAATGA+TGG + chr1.4:31237177-31237196 MS.gene064975:CDS 30.0%
TAAGGGTCAGAAATAATCAA+GGG - chr1.4:31235085-31235104 None:intergenic 30.0%
TACTATCTTAGAATTTGGGT+TGG + chr1.4:31235988-31236007 MS.gene064975:intron 30.0%
TGAAAGATGGGAATAGTTAA+GGG - chr1.4:31235136-31235155 None:intergenic 30.0%
TGTAACTCTGATAAGAGTTA+AGG + chr1.4:31235198-31235217 MS.gene064975:intron 30.0%
TTGTAGGCAACATAAAAGAA+TGG + chr1.4:31236261-31236280 MS.gene064975:intron 30.0%
TTTATGTGCTATGAACTTCT+TGG + chr1.4:31236553-31236572 MS.gene064975:intron 30.0%
TTTGAGAATCCCTATGTTTA+TGG - chr1.4:31237098-31237117 None:intergenic 30.0%
! AACACTTTTCAGTGTGATAA+TGG + chr1.4:31236805-31236824 MS.gene064975:intron 30.0%
! CTATTTCCTTTTCTATGCTT+TGG + chr1.4:31237460-31237479 MS.gene064975:intron 30.0%
!! AATAGCTTTACAACGTTTTG+AGG - chr1.4:31236899-31236918 None:intergenic 30.0%
!! GTTTTTCAAATGCCAAACAA+AGG + chr1.4:31237578-31237597 MS.gene064975:intron 30.0%
!!! GTCCTATCTTCATTTTTTAG+AGG - chr1.4:31235375-31235394 None:intergenic 30.0%
!!! TACATCACAACTTTTTTGTC+AGG - chr1.4:31235711-31235730 None:intergenic 30.0%
!!! TGTCGTTTTTTAGAGGAATT+TGG - chr1.4:31236213-31236232 None:intergenic 30.0%
AAAAATTGGAGTCAATGGAC+AGG + chr1.4:31235448-31235467 MS.gene064975:intron 35.0%
AAACACTAACAGCCTTTGTT+TGG - chr1.4:31237593-31237612 None:intergenic 35.0%
ACAGGAAAAATTGGAGTCAA+TGG + chr1.4:31235443-31235462 MS.gene064975:intron 35.0%
ACCATTTCAGCCATAAACAT+AGG + chr1.4:31237085-31237104 MS.gene064975:CDS 35.0%
ACTATAGAGACACAACACTT+GGG + chr1.4:31236298-31236317 MS.gene064975:intron 35.0%
AGCATAGAAAAGGAAATAGG+AGG - chr1.4:31237459-31237478 None:intergenic 35.0%
ATGTTTATGGCTGAAATGGT+TGG - chr1.4:31237085-31237104 None:intergenic 35.0%
ATTCCTAAGTTTAGTACAGC+AGG - chr1.4:31236848-31236867 None:intergenic 35.0%
CCATTTCAGCCATAAACATA+GGG + chr1.4:31237086-31237105 MS.gene064975:CDS 35.0%
CTGAAAGATGGGAATAGTTA+AGG - chr1.4:31235137-31235156 None:intergenic 35.0%
CTTAACTATTCCCATCTTTC+AGG + chr1.4:31235135-31235154 MS.gene064975:CDS 35.0%
GAAATGCATACCTGAAAGAT+GGG - chr1.4:31235148-31235167 None:intergenic 35.0%
GGTTTCATCATTAGACTTCA+AGG - chr1.4:31237154-31237173 None:intergenic 35.0%
GTACTGAACATAACAACACA+AGG - chr1.4:31235634-31235653 None:intergenic 35.0%
TCATGTTCGAATGCAAAACA+TGG + chr1.4:31236946-31236965 MS.gene064975:CDS 35.0%
TCTGATGAAAGAGTTGCTAA+AGG - chr1.4:31237369-31237388 None:intergenic 35.0%
TGAAATGCATACCTGAAAGA+TGG - chr1.4:31235149-31235168 None:intergenic 35.0%
TGAGACAAAAAGTTGTGTTG+TGG - chr1.4:31235505-31235524 None:intergenic 35.0%
TGCAGCAATCAAGCAAATAA+GGG - chr1.4:31235102-31235121 None:intergenic 35.0%
TTGCAGCAATCAAGCAAATA+AGG - chr1.4:31235103-31235122 None:intergenic 35.0%
! AGTTAAGAGACCTGCATTTT+TGG - chr1.4:31235901-31235920 None:intergenic 35.0%
! ATGCAAATATCTAGCTTGAG+AGG - chr1.4:31237423-31237442 None:intergenic 35.0%
! CAAATAAGTCTTATCCTCCA+AGG - chr1.4:31236440-31236459 None:intergenic 35.0%
!! CCTCTAAAGCGAGAAAATAA+AGG - chr1.4:31236188-31236207 None:intergenic 35.0%
!! GGATGAGTTATTTTATGCCT+TGG + chr1.4:31236420-31236439 MS.gene064975:intron 35.0%
!! GTTTCTGGAACAGGAAAAAT+TGG + chr1.4:31235434-31235453 MS.gene064975:intron 35.0%
!! TGAGTTATTTTATGCCTTGG+AGG + chr1.4:31236423-31236442 MS.gene064975:intron 35.0%
!! TGTAAAACTGTTTCTGGAAC+AGG + chr1.4:31235425-31235444 MS.gene064975:intron 35.0%
!!! ATGCTTTGGTTTTTTTTCCC+CGG + chr1.4:31237474-31237493 MS.gene064975:intron 35.0%
!!! CCTTTATTTTCTCGCTTTAG+AGG + chr1.4:31236185-31236204 MS.gene064975:intron 35.0%
AAAGCCACATAAGAAGAGGA+GGG - chr1.4:31236243-31236262 None:intergenic 40.0%
ACAACACAGGCCAAACTTTA+TGG - chr1.4:31235587-31235606 None:intergenic 40.0%
ACAACTGGAGTTATCTTGTC+CGG + chr1.4:31235759-31235778 MS.gene064975:intron 40.0%
AGACTTCAAGGAGACAATGA+AGG - chr1.4:31237142-31237161 None:intergenic 40.0%
AGAGGTTCAGAAGAACCAAA+TGG - chr1.4:31237405-31237424 None:intergenic 40.0%
AGATATTTGCATAACCCCCA+GGG + chr1.4:31237431-31237450 MS.gene064975:CDS 40.0%
AGCAAAGTCACATCCTGAAA+GGG - chr1.4:31237043-31237062 None:intergenic 40.0%
CAAATCAAACGCAGTACAAC+TGG - chr1.4:31235407-31235426 None:intergenic 40.0%
CACGAAACTCTATTGTGTTG+CGG + chr1.4:31235853-31235872 MS.gene064975:intron 40.0%
CACTATAGAGACACAACACT+TGG + chr1.4:31236297-31236316 MS.gene064975:intron 40.0%
CATGGTTGCAAGGAGAAAAT+AGG + chr1.4:31236964-31236983 MS.gene064975:CDS 40.0%
CCCTATGTTTATGGCTGAAA+TGG - chr1.4:31237089-31237108 None:intergenic 40.0%
CTACAAAGCCACATAAGAAG+AGG - chr1.4:31236247-31236266 None:intergenic 40.0%
CTACCTGCTGTACTAAACTT+AGG + chr1.4:31236842-31236861 MS.gene064975:CDS 40.0%
CTATAGAGACACAACACTTG+GGG + chr1.4:31236299-31236318 MS.gene064975:intron 40.0%
GAATGCAAAACATGGTTGCA+AGG + chr1.4:31236954-31236973 MS.gene064975:CDS 40.0%
GAGTTTCTCGTGATTCCATT+TGG + chr1.4:31237387-31237406 MS.gene064975:CDS 40.0%
GTACGACGATGATGAATAAG+TGG + chr1.4:31236345-31236364 MS.gene064975:intron 40.0%
GTGTCTCTATAGTGACAACT+TGG - chr1.4:31236291-31236310 None:intergenic 40.0%
TAGATATTTGCATAACCCCC+AGG + chr1.4:31237430-31237449 MS.gene064975:CDS 40.0%
TTGGATGTTGTAATCGGCAA+GGG - chr1.4:31237850-31237869 None:intergenic 40.0%
! CTTTTGCGGTAAACAACTAG+AGG + chr1.4:31237815-31237834 MS.gene064975:CDS 40.0%
! TTGTCTTGTGTTGTTCTGTC+TGG - chr1.4:31235255-31235274 None:intergenic 40.0%
!! CTCTTCTTATGTGGCTTTGT+AGG + chr1.4:31236245-31236264 MS.gene064975:intron 40.0%
!! TAGAATTTGGGTTGGACCTA+TGG + chr1.4:31235996-31236015 MS.gene064975:intron 40.0%
AACACAAGGCAGAACAACAC+AGG - chr1.4:31235600-31235619 None:intergenic 45.0%
ACTCTCCAGATGTCAAGTCA+TGG - chr1.4:31235929-31235948 None:intergenic 45.0%
AGCAGACTTTGCTGGTGTAT+TGG - chr1.4:31237795-31237814 None:intergenic 45.0%
AGGCAGAACAGCAAAACACA+AGG - chr1.4:31235614-31235633 None:intergenic 45.0%
AGTGACTTGAGTGGCCTATA+GGG + chr1.4:31235946-31235965 MS.gene064975:intron 45.0%
ATCTACATAGCAACCCAGAC+TGG + chr1.4:31237690-31237709 MS.gene064975:CDS 45.0%
ATCTGCAGCACCAAAAATGC+AGG + chr1.4:31235888-31235907 MS.gene064975:intron 45.0%
CAAAGCCACATAAGAAGAGG+AGG - chr1.4:31236244-31236263 None:intergenic 45.0%
CAAAGTCACATCCTGAAAGG+GGG - chr1.4:31237041-31237060 None:intergenic 45.0%
CAGCAAAGTCACATCCTGAA+AGG - chr1.4:31237044-31237063 None:intergenic 45.0%
CTCTCCAGATGTCAAGTCAT+GGG - chr1.4:31235928-31235947 None:intergenic 45.0%
CTTGGATGTTGTAATCGGCA+AGG - chr1.4:31237851-31237870 None:intergenic 45.0%
CTTTCCCTCCTCTTCTTATG+TGG + chr1.4:31236236-31236255 MS.gene064975:intron 45.0%
GAGTTGCTAAAGGAACCTGT+TGG - chr1.4:31237359-31237378 None:intergenic 45.0%
GCAAAGTCACATCCTGAAAG+GGG - chr1.4:31237042-31237061 None:intergenic 45.0%
GCAGACTTTGCTGGTGTATT+GGG - chr1.4:31237794-31237813 None:intergenic 45.0%
GCAGTCAATCTTTGCTGCAT+TGG + chr1.4:31237243-31237262 MS.gene064975:CDS 45.0%
GGGGAGAAACGAAGATAATG+AGG + chr1.4:31236318-31236337 MS.gene064975:intron 45.0%
GTCTATCGAAACACCCCTAT+AGG - chr1.4:31235963-31235982 None:intergenic 45.0%
TAGTCGGACTCAGAAGAGTT+AGG - chr1.4:31237270-31237289 None:intergenic 45.0%
TGTGGGGAATTTCTCACCAT+AGG - chr1.4:31236015-31236034 None:intergenic 45.0%
TTTCGTGAAGAACGTCCAAC+AGG + chr1.4:31237341-31237360 MS.gene064975:CDS 45.0%
! ACCATACCGCTATAGCGTTT+TGG + chr1.4:31236603-31236622 MS.gene064975:intron 45.0%
! ATACCGCTATAGCGTTTTGG+GGG + chr1.4:31236606-31236625 MS.gene064975:intron 45.0%
! CAGCAAAGTCTGCTCTTTTG+CGG + chr1.4:31237801-31237820 MS.gene064975:CDS 45.0%
! CATACCGCTATAGCGTTTTG+GGG + chr1.4:31236605-31236624 MS.gene064975:intron 45.0%
! CCATACCGCTATAGCGTTTT+GGG + chr1.4:31236604-31236623 MS.gene064975:intron 45.0%
!! AAAGGAAATAGGAGGTACCC+TGG - chr1.4:31237451-31237470 None:intergenic 45.0%
!! AAGGAAATAGGAGGTACCCT+GGG - chr1.4:31237450-31237469 None:intergenic 45.0%
!! ATGTACTCAATGACGGATCG+CGG - chr1.4:31236636-31236655 None:intergenic 45.0%
ACGTCTTCCTCCGTATGAGT+GGG + chr1.4:31237886-31237905 MS.gene064975:CDS 50.0%
CACTCCCATGACTTGACATC+TGG + chr1.4:31235921-31235940 MS.gene064975:intron 50.0%
CATCTGGAGAGTGACTTGAG+TGG + chr1.4:31235937-31235956 MS.gene064975:intron 50.0%
CCCAAAACGCTATAGCGGTA+TGG - chr1.4:31236607-31236626 None:intergenic 50.0%
CGCAAAAGAGCAGACTTTGC+TGG - chr1.4:31237803-31237822 None:intergenic 50.0%
GAGTGACTTGAGTGGCCTAT+AGG + chr1.4:31235945-31235964 MS.gene064975:intron 50.0%
GCGATCCGTCATTGAGTACA+TGG + chr1.4:31236635-31236654 MS.gene064975:intron 50.0%
GTCTGAACTCTCAACCCTCA+GGG - chr1.4:31237727-31237746 None:intergenic 50.0%
GTGACTTGAGTGGCCTATAG+GGG + chr1.4:31235947-31235966 MS.gene064975:intron 50.0%
TAGCCCCCAAAACGCTATAG+CGG - chr1.4:31236612-31236631 None:intergenic 50.0%
TCTGAACTCTCAACCCTCAG+GGG - chr1.4:31237726-31237745 None:intergenic 50.0%
TGTCTGAACTCTCAACCCTC+AGG - chr1.4:31237728-31237747 None:intergenic 50.0%
TGTTGTAATCGGCAAGGGTC+AGG - chr1.4:31237845-31237864 None:intergenic 50.0%
! CGTCGAGGGTTGACTTATCT+TGG - chr1.4:31237869-31237888 None:intergenic 50.0%
!! AGGAAATAGGAGGTACCCTG+GGG - chr1.4:31237449-31237468 None:intergenic 50.0%
CATACGGAGGAAGACGTCGA+GGG - chr1.4:31237883-31237902 None:intergenic 55.0%
CGTCTTCCTCCGTATGAGTG+GGG + chr1.4:31237887-31237906 MS.gene064975:CDS 55.0%
CTGAACTCTCAACCCTCAGG+GGG - chr1.4:31237725-31237744 None:intergenic 55.0%
GACGTCTTCCTCCGTATGAG+TGG + chr1.4:31237885-31237904 MS.gene064975:CDS 55.0%
TCATACGGAGGAAGACGTCG+AGG - chr1.4:31237884-31237903 None:intergenic 55.0%
!! GGAAATAGGAGGTACCCTGG+GGG - chr1.4:31237448-31237467 None:intergenic 55.0%
CCATGTGACTGCCCCCTTTC+AGG + chr1.4:31237027-31237046 MS.gene064975:CDS 60.0%
CCTGAAAGGGGGCAGTCACA+TGG - chr1.4:31237030-31237049 None:intergenic 60.0%
GGGGTGCGTCATTCCAGTCT+GGG - chr1.4:31237706-31237725 None:intergenic 60.0%
TGGAATGACGCACCCCCTGA+GGG + chr1.4:31237710-31237729 MS.gene064975:CDS 60.0%
CTGGAATGACGCACCCCCTG+AGG + chr1.4:31237709-31237728 MS.gene064975:CDS 65.0%
! GGGGGTGCGTCATTCCAGTC+TGG - chr1.4:31237707-31237726 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 31235076 31237914 31235076 ID=MS.gene064975
chr1.4 mRNA 31235076 31237914 31235076 ID=MS.gene064975.t1;Parent=MS.gene064975
chr1.4 exon 31235076 31235156 31235076 ID=MS.gene064975.t1.exon1;Parent=MS.gene064975.t1
chr1.4 CDS 31235076 31235156 31235076 ID=cds.MS.gene064975.t1;Parent=MS.gene064975.t1
chr1.4 exon 31236817 31237452 31236817 ID=MS.gene064975.t1.exon2;Parent=MS.gene064975.t1
chr1.4 CDS 31236817 31237452 31236817 ID=cds.MS.gene064975.t1;Parent=MS.gene064975.t1
chr1.4 exon 31237684 31237914 31237684 ID=MS.gene064975.t1.exon3;Parent=MS.gene064975.t1
chr1.4 CDS 31237684 31237914 31237684 ID=cds.MS.gene064975.t1;Parent=MS.gene064975.t1
Gene Sequence

>MS.gene064975

ATGGAGCCCTTGATTATTTCTGACCCTTATTTGCTTGATTGCTGCAAATGTTTTGAACCCTTAACTATTCCCATCTTTCAGGTATGCATTTCATTCTTTTTATTTTATTTAATAAGTTAGTTTGTAACTCTGATAAGAGTTAAGGGTACTTTTGTTTGATATGTAAAAGGTAAATACCAGACAGAACAACACAAGACAAAACAAAACAACACAAACAAACTTTTTGTTTTGTAGTTTGGTAGACAAAACATTATTTTGGTGTTTTAAACAACTTATACATATTGGATGCATTTGATCCTCTAAAAAATGAAGATAGGACATGACAACTCCAGTTGTACTGCGTTTGATTTGTAAAACTGTTTCTGGAACAGGAAAAATTGGAGTCAATGGACAGGACAAAAACAAAATTTTTTGTCTCTCACTAAACCACAACACAACTTTTTGTCTCACGTACAAGTTATCTAAAATACAAAAAATAACTTTTTGCCCACCAAAAAATTATTCAATACCATAAAGTTTGGCCTGTGTTGTTCTGCCTTGTGTTTTGCTGTTCTGCCTTGTGTTGTTATGTTCAGTACAAATTTAGCAAATCAAACGCACCCATTATTTTGATATTTTAAACAACTTATACACCTGACAAAAAAGTTGTGATGTAATTTAAACAACTTCAAATCAAACACATTACAACTGGAGTTATCTTGTCCGGTCCCTTATTTTTTATTTTAGCGGATCAAGCTCACACTAATTTGTCGTCATATATGCACTTGAGCGTAACGACACGAAACTCTATTGTGTTGCGGTTTCTGTAGTGCATCTGCAGCACCAAAAATGCAGGTCTCTTAACTCACTCCCATGACTTGACATCTGGAGAGTGACTTGAGTGGCCTATAGGGGTGTTTCGATAGACTATGATACTATCTTAGAATTTGGGTTGGACCTATGGTGAGAAATTCCCCACATGTATACTCATATTTAGGCTTTATCTCATGTGAGACTCTTAACAAGTAATTCACTTTATAAGTTAAAGTACTTATTATTAACCAATAATTAGAAAATTAAAGATGAATATTAGAGGTACATCATAACAATCAAGAGTTTTAAGTTAACGACCTTTATTTTCTCGCTTTAGAGGAGCCAAATTCCTCTAAAAAACGACATTACTTTCCCTCCTCTTCTTATGTGGCTTTGTAGGCAACATAAAAGAATGGAGAACCAAGTTGTCACTATAGAGACACAACACTTGGGGAGAAACGAAGATAATGAGGTTTAGTACGACGATGATGAATAAGTGGTTAGAGATAGTGATTCTGTTTAAGGAATCACTTTTGTTTCTTTTAAATGCTTGGATGAGTTATTTTATGCCTTGGAGGATAAGACTTATTTGCTTTAATTGGGTTTTGAATATTACAAGTTACAAGGAAATTTGATTAATAATTATGAATGTCTTTAATTTTGTATATCCTTCTGTTTTTTAGTTTTTATGTGCTATGAACTTCTTGGATTGTTTCTCTAAACTCTGATATAGCGACCATACCGCTATAGCGTTTTGGGGGCTAGCCGCGATCCGTCATTGAGTACATGGATTTTGAGAAGAATAAGTTGAGAATGATTAACTTTATGTTGGTTATATTTTTGATTGAATAACTTGCTACCAACAAAGAAATCTCGTATTTTATTTTATTCTAACAAATGATTCAAAGTCTAATTTGATGATTTTCTTTCATGTTGCAACACTTTTCAGTGTGATAATGGTCATATTGTTTGCTCTACCTGCTGTACTAAACTTAGGAATAAGTGTCACGAGTGCTCATTGCGCATCACCTCAAAACGTTGTAAAGCTATTGAGAATCTATTGCTATCTATCGAAATGTCATGTTCGAATGCAAAACATGGTTGCAAGGAGAAAATAGGTTACACTGATAGGAAGCATGAAGAAAAATGCATCTACGTACCATGTGACTGCCCCCTTTCAGGATGTGACTTTGCTGCATCATCAGAAGTGTTGTCCAACCATTTCAGCCATAAACATAGGGATTCTCAAATCAAATTTTCTTATGGTCACTCCTTCATTGTCTCCTTGAAGTCTAATGATGAAACCATTGTTCTTCAAGAGAAAAATGATGGTAAACTATTTATTCTCAATAATAGAAGTATGCTTTTGGGAAATGCAGTCAATCTTTGCTGCATTGGTCCTAACTCTTCTGAGTCCGACTATAGTTATGATATATTGGCTAGGTCTCAGATATCCAAACTGAAATTACAGTCTTTCGTGAAGAACGTCCAACAGGTTCCTTTAGCAACTCTTTCATCAGAGTTTCTCGTGATTCCATTTGGTTCTTCTGAACCTCTCAAGCTAGATATTTGCATAACCCCCAGGGTACCTCCTATTTCCTTTTCTATGCTTTGGTTTTTTTTCCCCGGTTAAAGTTTTGTTATTATTATTATTATGATTTTTTTTTTTATATTTTGAATTTATACTCTAGCATTTTATCTTTTTCTTCAGTTTTTCAAATGCCAAACAAAGGCTGTTAGTGTTTTCTATTTTTGGATCAGTTTTGAAATATCAATCTCAAATTTTCTTTATTGATTTAATGGCAATTTTATGCAGATGCAAATCTACATAGCAACCCAGACTGGAATGACGCACCCCCTGAGGGTTGAGAGTTCAGACAAGATAGTCAATGTGAAGAAAATGATTCATGACAAGGAATATATCCCAATACACCAGCAAAGTCTGCTCTTTTGCGGTAAACAACTAGAGGATAACCTGACCCTTGCCGATTACAACATCCAAGATAAGTCAACCCTCGACGTCTTCCTCCGTATGAGTGGGGACTAG

Protein sequence

>MS.gene064975.t1

MEPLIISDPYLLDCCKCFEPLTIPIFQCDNGHIVCSTCCTKLRNKCHECSLRITSKRCKAIENLLLSIEMSCSNAKHGCKEKIGYTDRKHEEKCIYVPCDCPLSGCDFAASSEVLSNHFSHKHRDSQIKFSYGHSFIVSLKSNDETIVLQEKNDGKLFILNNRSMLLGNAVNLCCIGPNSSESDYSYDILARSQISKLKLQSFVKNVQQVPLATLSSEFLVIPFGSSEPLKLDICITPRMQIYIATQTGMTHPLRVESSDKIVNVKKMIHDKEYIPIHQQSLLFCGKQLEDNLTLADYNIQDKSTLDVFLRMSGD