AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene53619


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53619.t1 MTR_1g046640 87.302 315 40 0 1 315 1 315 0.0 556
MS.gene53619.t1 MTR_1g046650 81.587 315 58 0 1 315 32 346 0.0 518
MS.gene53619.t1 MTR_1g046650 81.587 315 58 0 1 315 1 315 0.0 517
MS.gene53619.t1 MTR_5g067400 81.587 315 57 1 1 314 1 315 0.0 516
MS.gene53619.t1 MTR_7g024290 76.025 317 74 2 1 315 1 317 1.60e-171 478
MS.gene53619.t1 MTR_1g046650 81.034 290 55 0 26 315 26 315 3.22e-169 472
MS.gene53619.t1 MTR_7g094390 69.108 314 96 1 3 315 164 477 4.74e-152 435
MS.gene53619.t1 MTR_5g076660 69.524 315 92 2 4 314 26 340 2.65e-150 426
MS.gene53619.t1 MTR_5g076520 69.206 315 92 3 1 310 1 315 2.41e-148 420
MS.gene53619.t1 MTR_5g076720 66.246 317 103 2 3 315 74 390 3.01e-148 422
MS.gene53619.t1 MTR_5g076810 79.104 268 54 2 49 314 2 269 2.71e-146 412
MS.gene53619.t1 MTR_2g038420 63.522 318 110 3 4 315 18 335 3.52e-139 397
MS.gene53619.t1 MTR_2g038430 62.577 326 108 3 4 315 18 343 9.05e-139 396
MS.gene53619.t1 MTR_1g046650 79.675 246 50 0 70 315 1 246 1.24e-138 392
MS.gene53619.t1 MTR_5g076370 63.694 314 109 3 4 312 26 339 1.26e-136 390
MS.gene53619.t1 MTR_5g061290 62.696 319 110 4 4 315 11 327 3.04e-134 384
MS.gene53619.t1 MTR_5g076505 67.235 293 92 2 27 315 23 315 1.34e-133 382
MS.gene53619.t1 MTR_5g076820 71.942 278 71 5 1 273 10 285 6.99e-133 379
MS.gene53619.t1 MTR_5g076540 73.684 228 59 1 1 227 1 228 4.97e-115 332
MS.gene53619.t1 MTR_5g077020 69.697 198 46 5 53 240 17 210 1.99e-83 251
MS.gene53619.t1 MTR_4g094468 50.847 236 110 4 5 236 91 324 2.57e-70 221
MS.gene53619.t1 MTR_4g058025 83.478 115 17 2 81 193 14 128 8.83e-59 187
MS.gene53619.t1 MTR_7g085590 30.198 202 125 5 11 207 63 253 3.39e-25 102
MS.gene53619.t1 MTR_5g092700 64.000 75 27 0 240 314 1 75 8.06e-24 95.5
MS.gene53619.t1 MTR_4g073580 64.000 75 27 0 240 314 1 75 8.06e-24 95.5
MS.gene53619.t1 MTR_7g105080 64.000 75 27 0 240 314 1 75 1.56e-23 94.0
MS.gene53619.t1 MTR_3g092130 64.000 75 27 0 240 314 1 75 1.56e-23 94.0
MS.gene53619.t1 MTR_1g059690 64.000 75 27 0 240 314 1 75 1.56e-23 94.0
MS.gene53619.t1 MTR_4g073580 64.000 75 27 0 240 314 1 75 2.93e-23 94.7
MS.gene53619.t1 MTR_3g092130 64.000 75 27 0 240 314 1 75 3.87e-23 93.2
MS.gene53619.t1 MTR_4g088485 64.000 75 27 0 240 314 1 75 5.48e-23 95.1
MS.gene53619.t1 MTR_4g088485 64.000 75 27 0 240 314 138 212 5.48e-23 95.1
MS.gene53619.t1 MTR_4g088485 49.333 75 23 1 240 314 77 136 6.41e-13 67.4
MS.gene53619.t1 MTR_7g116360 51.327 113 51 2 206 314 11 123 5.85e-23 96.3
MS.gene53619.t1 MTR_7g116360 64.000 75 27 0 240 314 125 199 2.96e-22 94.4
MS.gene53619.t1 MTR_7g116360 64.000 75 27 0 240 314 201 275 2.96e-22 94.4
MS.gene53619.t1 MTR_1g066390 64.000 75 27 0 240 314 1 75 5.87e-23 95.5
MS.gene53619.t1 MTR_1g066390 64.000 75 27 0 240 314 77 151 5.87e-23 95.5
MS.gene53619.t1 MTR_1g066390 64.000 75 27 0 240 314 153 227 5.87e-23 95.5
MS.gene53619.t1 MTR_7g116360 64.000 75 27 0 240 314 1 75 6.16e-23 95.1
MS.gene53619.t1 MTR_7g116360 64.000 75 27 0 240 314 77 151 6.16e-23 95.1
MS.gene53619.t1 MTR_7g116360 64.000 75 27 0 240 314 153 227 6.16e-23 95.1
MS.gene53619.t1 MTR_5g033960 64.000 75 27 0 240 314 1 75 6.58e-23 93.2
MS.gene53619.t1 MTR_8g088060 64.000 75 27 0 240 314 1 75 6.85e-23 93.2
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 1 75 1.50e-22 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 77 151 1.50e-22 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 153 227 1.50e-22 95.1
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 1 75 2.01e-22 95.1
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 77 151 2.01e-22 95.1
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 153 227 2.01e-22 95.1
MS.gene53619.t1 MTR_6g061930 64.000 75 27 0 240 314 1 75 2.31e-22 95.1
MS.gene53619.t1 MTR_6g061930 64.000 75 27 0 240 314 77 151 2.31e-22 95.1
MS.gene53619.t1 MTR_6g061930 64.000 75 27 0 240 314 214 288 2.31e-22 95.1
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 1 75 2.54e-22 95.1
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 77 151 2.54e-22 95.1
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 153 227 2.54e-22 95.1
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 229 303 2.54e-22 95.1
MS.gene53619.t1 MTR_4g080920 62.667 75 28 0 240 314 77 151 2.86e-22 93.6
MS.gene53619.t1 MTR_4g080920 62.667 75 28 0 240 314 1 75 6.29e-22 92.4
MS.gene53619.t1 MTR_4g080920 49.333 75 38 0 240 314 153 227 8.79e-14 70.1
MS.gene53619.t1 MTR_8g081020 64.000 75 27 0 240 314 1 75 5.86e-22 95.5
MS.gene53619.t1 MTR_8g081020 64.000 75 27 0 240 314 77 151 5.86e-22 95.5
MS.gene53619.t1 MTR_8g081020 64.000 75 27 0 240 314 153 227 5.86e-22 95.5
MS.gene53619.t1 MTR_8g081020 64.000 75 27 0 240 314 229 303 5.86e-22 95.5
MS.gene53619.t1 MTR_8g081020 64.000 75 27 0 240 314 305 379 5.86e-22 95.5
MS.gene53619.t1 MTR_4g080797 64.000 75 27 0 240 314 1 75 6.22e-22 95.1
MS.gene53619.t1 MTR_4g080797 64.000 75 27 0 240 314 77 151 6.22e-22 95.1
MS.gene53619.t1 MTR_4g080797 64.000 75 27 0 240 314 153 227 6.22e-22 95.1
MS.gene53619.t1 MTR_4g080797 64.000 75 27 0 240 314 229 303 6.22e-22 95.1
MS.gene53619.t1 MTR_4g080797 64.000 75 27 0 240 314 305 379 6.22e-22 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 1 75 6.22e-22 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 77 151 6.22e-22 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 153 227 6.22e-22 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 229 303 6.22e-22 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 305 379 6.22e-22 95.1
MS.gene53619.t1 MTR_4g091580 64.000 75 27 0 240 314 1 75 6.34e-22 95.1
MS.gene53619.t1 MTR_4g091580 64.000 75 27 0 240 314 77 151 6.34e-22 95.1
MS.gene53619.t1 MTR_4g091580 64.000 75 27 0 240 314 153 227 6.34e-22 95.1
MS.gene53619.t1 MTR_4g091580 64.000 75 27 0 240 314 305 379 6.34e-22 95.1
MS.gene53619.t1 MTR_4g091580 62.667 75 28 0 240 314 229 303 2.22e-21 93.6
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 1 75 6.53e-22 95.1
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 77 151 6.53e-22 95.1
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 153 227 6.53e-22 95.1
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 229 303 6.53e-22 95.1
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 305 379 6.53e-22 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 1 75 1.09e-21 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 77 151 1.09e-21 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 153 227 1.09e-21 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 229 303 1.09e-21 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 305 379 1.09e-21 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 381 455 1.09e-21 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 1 75 1.09e-21 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 77 151 1.09e-21 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 153 227 1.09e-21 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 229 303 1.09e-21 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 305 379 1.09e-21 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 381 455 1.09e-21 95.1
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 1 75 1.32e-21 95.5
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 77 151 1.32e-21 95.5
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 153 227 1.32e-21 95.5
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 229 303 1.32e-21 95.5
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 305 379 1.32e-21 95.5
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 381 455 1.32e-21 95.5
MS.gene53619.t1 MTR_8g018230 64.000 75 27 0 240 314 457 531 1.32e-21 95.5
MS.gene53619.t1 MTR_4g091580 64.000 75 27 0 240 314 1 75 1.34e-21 95.5
MS.gene53619.t1 MTR_4g091580 64.000 75 27 0 240 314 77 151 1.34e-21 95.5
MS.gene53619.t1 MTR_4g091580 64.000 75 27 0 240 314 153 227 1.34e-21 95.5
MS.gene53619.t1 MTR_4g091580 64.000 75 27 0 240 314 229 303 1.34e-21 95.5
MS.gene53619.t1 MTR_4g091580 64.000 75 27 0 240 314 381 455 1.34e-21 95.5
MS.gene53619.t1 MTR_4g091580 64.000 75 27 0 240 314 457 531 1.34e-21 95.5
MS.gene53619.t1 MTR_4g091580 62.667 75 28 0 240 314 305 379 1.45e-20 92.4
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 1 75 1.39e-21 95.5
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 77 151 1.39e-21 95.5
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 153 227 1.39e-21 95.5
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 229 303 1.39e-21 95.5
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 305 379 1.39e-21 95.5
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 381 455 1.39e-21 95.5
MS.gene53619.t1 MTR_4g081010 64.000 75 27 0 240 314 457 531 1.39e-21 95.5
MS.gene53619.t1 MTR_4g088495 64.000 75 27 0 240 314 77 151 1.72e-21 95.5
MS.gene53619.t1 MTR_4g088495 64.000 75 27 0 240 314 153 227 1.72e-21 95.5
MS.gene53619.t1 MTR_4g088495 64.000 75 27 0 240 314 229 303 1.72e-21 95.5
MS.gene53619.t1 MTR_4g088495 64.000 75 27 0 240 314 305 379 1.72e-21 95.5
MS.gene53619.t1 MTR_4g088495 64.000 75 27 0 240 314 381 455 1.72e-21 95.5
MS.gene53619.t1 MTR_4g088495 64.000 75 27 0 240 314 457 531 1.72e-21 95.5
MS.gene53619.t1 MTR_4g088495 64.000 75 27 0 240 314 533 607 1.72e-21 95.5
MS.gene53619.t1 MTR_4g088495 64.000 75 27 0 240 314 609 683 1.72e-21 95.5
MS.gene53619.t1 MTR_4g088495 64.000 75 27 0 240 314 685 759 1.72e-21 95.5
MS.gene53619.t1 MTR_4g088495 64.000 75 27 0 240 314 761 835 1.72e-21 95.5
MS.gene53619.t1 MTR_4g088495 64.000 75 27 0 240 314 1 75 2.07e-21 95.1
MS.gene53619.t1 MTR_4g009980 57.971 69 29 0 247 315 3 71 2.06e-21 86.7
MS.gene53619.t1 MTR_8g479250 60.000 85 34 0 230 314 131 215 1.80e-20 90.1
MS.gene53619.t1 MTR_8g479250 47.561 82 32 1 230 311 207 277 4.25e-12 66.2
MS.gene53619.t1 MTR_3g091510 29.665 209 136 5 11 208 60 268 7.80e-20 88.6
MS.gene53619.t1 MTR_1g054335 27.016 248 163 7 11 240 58 305 1.27e-19 87.8
MS.gene53619.t1 MTR_8g027520 29.665 209 136 6 11 208 44 252 1.72e-19 87.4
MS.gene53619.t1 MTR_8g027520 29.665 209 136 6 11 208 53 261 2.25e-19 87.0
MS.gene53619.t1 MTR_1g008120 28.230 209 139 5 11 208 68 276 1.11e-18 85.5
MS.gene53619.t1 MTR_8g038370 27.650 217 132 7 11 209 112 321 1.36e-18 85.5
MS.gene53619.t1 MTR_7g093600 27.049 244 158 7 11 234 59 302 4.31e-18 83.6
MS.gene53619.t1 MTR_3g017590 26.267 217 135 7 11 209 53 262 6.29e-18 82.8
MS.gene53619.t1 MTR_5g076350 49.351 77 38 1 240 315 8 84 4.41e-17 75.1
MS.gene53619.t1 MTR_5g076740 55.263 76 33 1 240 314 86 161 8.52e-17 77.0
MS.gene53619.t1 MTR_5g076760 64.815 54 19 0 254 307 9 62 8.60e-17 74.3
MS.gene53619.t1 MTR_5g061310 52.632 76 36 0 240 315 2 77 1.26e-16 73.9
MS.gene53619.t1 MTR_7g117415 26.728 217 148 5 3 208 53 269 1.56e-15 76.3
MS.gene53619.t1 MTR_5g076780 58.491 53 22 0 254 306 4 56 2.97e-13 64.3
MS.gene53619.t1 MTR_5g076340 46.154 78 40 2 240 315 9 86 3.50e-12 62.0
MS.gene53619.t1 MTR_5g076750 56.250 48 21 0 264 311 17 64 5.97e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53619.t1 AT5G37930 40.598 234 134 3 8 236 107 340 4.88e-52 175
MS.gene53619.t1 AT1G66620 34.468 235 144 5 11 236 41 274 2.62e-39 140
MS.gene53619.t1 AT5G37870 33.778 225 143 5 5 223 36 260 2.51e-38 137
MS.gene53619.t1 AT5G37890 35.526 228 134 5 5 223 42 265 1.17e-35 130
MS.gene53619.t1 AT1G66630 33.730 252 140 6 11 236 46 296 1.28e-35 130
MS.gene53619.t1 AT1G66650 33.193 238 147 5 11 236 83 320 7.99e-35 129
MS.gene53619.t1 AT1G66660 33.065 248 153 7 2 237 94 340 8.32e-33 124
MS.gene53619.t1 AT5G62800 38.172 186 108 5 11 189 40 225 2.79e-31 119
MS.gene53619.t1 AT5G62800 38.172 186 108 5 11 189 40 225 3.20e-31 120
MS.gene53619.t1 AT5G37910 32.159 227 147 4 4 223 28 254 2.84e-30 116
MS.gene53619.t1 AT2G35635 64.000 75 27 0 240 314 1 75 8.15e-24 95.5
MS.gene53619.t1 AT1G31340 64.000 75 27 0 240 314 1 75 1.06e-23 95.5
MS.gene53619.t1 AT4G05050 64.000 75 27 0 240 314 1 75 1.23e-23 95.1
MS.gene53619.t1 AT4G05050 64.000 75 27 0 240 314 77 151 1.23e-23 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 1 75 1.23e-23 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 77 151 1.23e-23 95.1
MS.gene53619.t1 AT3G52590 64.000 75 27 0 240 314 1 75 2.04e-23 93.6
MS.gene53619.t1 AT2G36170 64.000 75 27 0 240 314 1 75 2.04e-23 93.6
MS.gene53619.t1 AT1G65350 64.000 75 27 0 240 314 152 226 3.22e-23 97.8
MS.gene53619.t1 AT1G65350 64.000 75 27 0 240 314 1 75 2.84e-22 95.5
MS.gene53619.t1 AT1G65350 62.667 75 27 1 240 314 77 150 1.68e-19 87.8
MS.gene53619.t1 AT1G65350 50.562 89 30 1 240 314 228 316 6.08e-16 77.4
MS.gene53619.t1 AT2G47110 64.000 75 27 0 240 314 1 75 3.97e-23 94.0
MS.gene53619.t1 AT2G47110 64.000 75 27 0 240 314 1 75 3.97e-23 94.0
MS.gene53619.t1 AT3G62250 64.000 75 27 0 240 314 1 75 4.02e-23 94.0
MS.gene53619.t1 AT1G23410 64.000 75 27 0 240 314 1 75 5.40e-23 93.6
MS.gene53619.t1 AT4G05050 64.000 75 27 0 240 314 1 75 6.46e-23 95.1
MS.gene53619.t1 AT4G05050 64.000 75 27 0 240 314 77 151 6.46e-23 95.1
MS.gene53619.t1 AT4G05050 64.000 75 27 0 240 314 153 227 6.46e-23 95.1
MS.gene53619.t1 AT4G05050 64.000 75 27 0 240 314 1 75 6.46e-23 95.1
MS.gene53619.t1 AT4G05050 64.000 75 27 0 240 314 77 151 6.46e-23 95.1
MS.gene53619.t1 AT4G05050 64.000 75 27 0 240 314 153 227 6.46e-23 95.1
MS.gene53619.t1 AT4G05050 64.000 75 27 0 240 314 1 75 6.46e-23 95.1
MS.gene53619.t1 AT4G05050 64.000 75 27 0 240 314 77 151 6.46e-23 95.1
MS.gene53619.t1 AT4G05050 64.000 75 27 0 240 314 153 227 6.46e-23 95.1
MS.gene53619.t1 AT4G02890 64.000 75 27 0 240 314 1 75 6.46e-23 95.1
MS.gene53619.t1 AT4G02890 64.000 75 27 0 240 314 77 151 6.46e-23 95.1
MS.gene53619.t1 AT4G02890 64.000 75 27 0 240 314 153 227 6.46e-23 95.1
MS.gene53619.t1 AT4G02890 64.000 75 27 0 240 314 1 75 6.46e-23 95.1
MS.gene53619.t1 AT4G02890 64.000 75 27 0 240 314 77 151 6.46e-23 95.1
MS.gene53619.t1 AT4G02890 64.000 75 27 0 240 314 153 227 6.46e-23 95.1
MS.gene53619.t1 AT5G03240 64.000 75 27 0 240 314 1 75 2.35e-22 95.5
MS.gene53619.t1 AT5G03240 64.000 75 27 0 240 314 77 151 2.35e-22 95.5
MS.gene53619.t1 AT5G03240 64.000 75 27 0 240 314 153 227 2.35e-22 95.5
MS.gene53619.t1 AT5G03240 64.000 75 27 0 240 314 229 303 2.35e-22 95.5
MS.gene53619.t1 AT5G03240 64.000 75 27 0 240 314 1 75 2.35e-22 95.5
MS.gene53619.t1 AT5G03240 64.000 75 27 0 240 314 77 151 2.35e-22 95.5
MS.gene53619.t1 AT5G03240 64.000 75 27 0 240 314 153 227 2.35e-22 95.5
MS.gene53619.t1 AT5G03240 64.000 75 27 0 240 314 229 303 2.35e-22 95.5
MS.gene53619.t1 AT5G03240 64.000 75 27 0 240 314 1 75 2.35e-22 95.5
MS.gene53619.t1 AT5G03240 64.000 75 27 0 240 314 77 151 2.35e-22 95.5
MS.gene53619.t1 AT5G03240 64.000 75 27 0 240 314 153 227 2.35e-22 95.5
MS.gene53619.t1 AT5G03240 64.000 75 27 0 240 314 229 303 2.35e-22 95.5
MS.gene53619.t1 AT5G20620 64.000 75 27 0 240 314 1 75 2.35e-22 95.5
MS.gene53619.t1 AT5G20620 64.000 75 27 0 240 314 77 151 2.35e-22 95.5
MS.gene53619.t1 AT5G20620 64.000 75 27 0 240 314 153 227 2.35e-22 95.5
MS.gene53619.t1 AT5G20620 64.000 75 27 0 240 314 229 303 2.35e-22 95.5
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 1 75 2.58e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 77 151 2.58e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 153 227 2.58e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 229 303 2.58e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 1 75 2.58e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 77 151 2.58e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 153 227 2.58e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 229 303 2.58e-22 95.1
MS.gene53619.t1 AT4G02890 64.000 75 27 0 240 314 1 75 2.58e-22 95.1
MS.gene53619.t1 AT4G02890 64.000 75 27 0 240 314 77 151 2.58e-22 95.1
MS.gene53619.t1 AT4G02890 64.000 75 27 0 240 314 153 227 2.58e-22 95.1
MS.gene53619.t1 AT4G02890 64.000 75 27 0 240 314 229 303 2.58e-22 95.1
MS.gene53619.t1 AT4G02890 64.000 75 27 0 240 314 1 75 2.58e-22 95.1
MS.gene53619.t1 AT4G02890 64.000 75 27 0 240 314 77 151 2.58e-22 95.1
MS.gene53619.t1 AT4G02890 64.000 75 27 0 240 314 153 227 2.58e-22 95.1
MS.gene53619.t1 AT4G02890 64.000 75 27 0 240 314 229 303 2.58e-22 95.1
MS.gene53619.t1 AT1G55060 62.667 75 28 0 240 314 77 151 3.09e-22 93.6
MS.gene53619.t1 AT1G55060 61.333 75 29 0 240 314 1 75 8.67e-21 89.4
MS.gene53619.t1 AT1G55060 61.333 75 29 0 240 314 153 227 2.84e-20 88.2
MS.gene53619.t1 AT5G20620 64.000 75 27 0 240 314 1 75 6.45e-22 95.1
MS.gene53619.t1 AT5G20620 64.000 75 27 0 240 314 77 151 6.45e-22 95.1
MS.gene53619.t1 AT5G20620 64.000 75 27 0 240 314 153 227 6.45e-22 95.1
MS.gene53619.t1 AT5G20620 64.000 75 27 0 240 314 229 303 6.45e-22 95.1
MS.gene53619.t1 AT5G20620 64.000 75 27 0 240 314 305 379 6.45e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 1 75 6.51e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 77 151 6.51e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 153 227 6.51e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 229 303 6.51e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 305 379 6.51e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 1 75 6.51e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 77 151 6.51e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 153 227 6.51e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 229 303 6.51e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 305 379 6.51e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 1 75 6.51e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 77 151 6.51e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 153 227 6.51e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 229 303 6.51e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 305 379 6.51e-22 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 1 75 1.14e-21 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 77 151 1.14e-21 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 153 227 1.14e-21 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 229 303 1.14e-21 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 305 379 1.14e-21 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 381 455 1.14e-21 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 1 75 1.14e-21 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 77 151 1.14e-21 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 153 227 1.14e-21 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 229 303 1.14e-21 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 305 379 1.14e-21 95.1
MS.gene53619.t1 AT4G05320 64.000 75 27 0 240 314 381 455 1.14e-21 95.1
MS.gene53619.t1 AT5G37640 56.471 85 37 0 230 314 69 153 2.48e-21 92.8
MS.gene53619.t1 AT5G37640 61.333 75 29 0 240 314 155 229 2.16e-19 87.4
MS.gene53619.t1 AT5G37640 60.526 76 29 1 240 314 231 306 1.71e-18 84.7
MS.gene53619.t1 AT5G37640 53.333 75 35 0 240 314 3 77 6.17e-14 71.6
MS.gene53619.t1 AT3G09790 61.333 75 29 0 240 314 3 77 2.56e-19 89.0
MS.gene53619.t1 AT3G09790 61.333 75 29 0 240 314 79 153 1.05e-18 87.0
MS.gene53619.t1 AT3G09790 58.904 73 30 0 240 312 552 624 2.05e-16 80.1
MS.gene53619.t1 AT3G09790 49.398 83 35 2 240 315 155 237 1.40e-12 68.6
MS.gene53619.t1 AT3G09790 50.704 71 35 0 240 310 393 463 8.56e-11 63.2
MS.gene53619.t1 AT3G09790 61.333 75 29 0 240 314 3 77 2.56e-19 89.0
MS.gene53619.t1 AT3G09790 61.333 75 29 0 240 314 79 153 1.05e-18 87.0
MS.gene53619.t1 AT3G09790 58.904 73 30 0 240 312 552 624 2.05e-16 80.1
MS.gene53619.t1 AT3G09790 49.398 83 35 2 240 315 155 237 1.40e-12 68.6
MS.gene53619.t1 AT3G09790 50.704 71 35 0 240 310 393 463 8.56e-11 63.2
MS.gene53619.t1 AT3G61790 27.650 217 146 5 3 208 52 268 1.90e-18 84.7
MS.gene53619.t1 AT2G41980 26.613 248 164 8 11 240 54 301 9.40e-18 82.4
MS.gene53619.t1 AT3G58040 26.613 248 164 8 11 240 57 304 1.24e-17 82.0
MS.gene53619.t1 AT3G58040 26.613 248 164 8 11 240 57 304 1.24e-17 82.0
MS.gene53619.t1 AT4G27880 27.751 209 140 5 11 208 61 269 1.54e-17 82.0
MS.gene53619.t1 AT1G53930 56.164 73 32 0 240 312 86 158 3.99e-17 77.8
MS.gene53619.t1 AT1G66660 29.534 193 123 7 57 237 25 216 1.64e-15 74.7
MS.gene53619.t1 AT3G58040 31.579 133 87 3 11 139 57 189 2.49e-15 74.3
MS.gene53619.t1 AT1G66610 27.219 169 119 4 59 223 166 334 8.53e-15 74.7
MS.gene53619.t1 AT1G66610 51.613 62 30 0 11 72 53 114 1.15e-12 68.2
MS.gene53619.t1 AT1G53950 41.304 92 50 1 227 314 52 143 2.22e-13 67.0
MS.gene53619.t1 AT1G66610 49.254 67 34 0 11 77 158 224 6.98e-13 67.4
MS.gene53619.t1 AT1G66610 51.613 62 30 0 11 72 53 114 2.38e-12 66.2

Find 64 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAGAATCCCTATGTTTA+TGG 0.123239 1.2:-29421508 None:intergenic
CTTAACTATTCCCATCTTTC+AGG 0.143964 1.2:+29419537 MS.gene53619:CDS
TTGCAGCAATCAAGCAAATA+AGG 0.243120 1.2:-29419502 None:intergenic
CAATAATAGAAGCATGCTTT+TGG 0.291859 1.2:+29421628 MS.gene53619:CDS
GCAGACTTTGCTGGTGTATT+GGG 0.317374 1.2:-29422199 None:intergenic
CTGAAAGATGGGAATAGTTA+AGG 0.340707 1.2:-29419536 None:intergenic
CGACTATAGTTATGATATAT+TGG 0.341944 1.2:+29421697 MS.gene53619:CDS
CTTCTCTTGGATGTTGTAAT+CGG 0.344087 1.2:-29422261 None:intergenic
AGCAGACTTTGCTGGTGTAT+TGG 0.350572 1.2:-29422200 None:intergenic
GGTGGTGCGTCATTCCAGTC+TGG 0.372667 1.2:-29422112 None:intergenic
CCCTATGTTTATGGCTGAAA+TGG 0.372935 1.2:-29421499 None:intergenic
GAAAGACTGTAATTTCAGTT+TGG 0.382222 1.2:-29421735 None:intergenic
AGAAAATAAGTTACACTGAT+AGG 0.383704 1.2:+29421390 MS.gene53619:CDS
GGTTTCATCATTAGACTTCA+AGG 0.410456 1.2:-29421564 None:intergenic
CGCAAAAGAGCAGACTTTGC+TGG 0.415609 1.2:-29422208 None:intergenic
CGTCGAGGGTTGACTTCTCT+TGG 0.427062 1.2:-29422274 None:intergenic
GAGTTTCTCGTGATTCCATT+TGG 0.442457 1.2:+29421800 MS.gene53619:CDS
TGAAAGATGGGAATAGTTAA+GGG 0.445438 1.2:-29419535 None:intergenic
TGTTGTAATCGGCAAGGGTC+AGG 0.451857 1.2:-29422250 None:intergenic
GCAGTCAATCTTTGCTGCAT+TGG 0.459248 1.2:+29421656 MS.gene53619:CDS
TGAAATGCATACCTGAAAGA+TGG 0.465935 1.2:-29419548 None:intergenic
TAGTCGGACTCAGAAGAGTT+AGG 0.480424 1.2:-29421680 None:intergenic
TTTCGTGAAGAACGTCCAAC+AGG 0.481416 1.2:+29421754 MS.gene53619:CDS
AGCAAAGTCACATCCTGAAA+GGG 0.487737 1.2:-29421453 None:intergenic
TGCAGCAATCAAGCAAATAA+GGG 0.489963 1.2:-29419501 None:intergenic
ATCTACATAGCAACCCAGAC+TGG 0.496234 1.2:+29422098 MS.gene53619:CDS
CTACCTGCTGTACTAAACTT+AGG 0.496282 1.2:+29421255 MS.gene53619:CDS
GTTCTTCAAGAGGAAAATGA+TGG 0.496476 1.2:+29421590 MS.gene53619:CDS
ATTCCTAAGTTTAGTACAGC+AGG 0.503985 1.2:-29421258 None:intergenic
GTGGTGCGTCATTCCAGTCT+GGG 0.506680 1.2:-29422111 None:intergenic
AGAGGTTCAGAAGAACCAAA+TGG 0.514036 1.2:-29421815 None:intergenic
ATAAGGGTCAGAAATAATCA+AGG 0.516830 1.2:-29419485 None:intergenic
CCATTTCAGCCATAAACATA+GGG 0.526155 1.2:+29421499 MS.gene53619:CDS
CTTGGATGTTGTAATCGGCA+AGG 0.528590 1.2:-29422256 None:intergenic
GCAAAGTCACATCCTGAAAG+GGG 0.530762 1.2:-29421452 None:intergenic
GAAATGCATACCTGAAAGAT+GGG 0.530956 1.2:-29419547 None:intergenic
TGAAACCATTGTTCTTCAAG+AGG 0.538905 1.2:+29421580 MS.gene53619:CDS
ACCATTTCAGCCATAAACAT+AGG 0.540144 1.2:+29421498 MS.gene53619:CDS
ACGTCTTCCTCCGTATGAGT+GGG 0.546503 1.2:+29422294 MS.gene53619:CDS
CAGCAAAGTCACATCCTGAA+AGG 0.549420 1.2:-29421454 None:intergenic
TCTGATGAAAGAGTTGCTAA+AGG 0.550142 1.2:-29421779 None:intergenic
TGTCTGAACTCTCAACCCTC+AGG 0.553128 1.2:-29422133 None:intergenic
GACGTCTTCCTCCGTATGAG+TGG 0.561351 1.2:+29422293 MS.gene53619:CDS
ATGCAAATATCTAGCTTGAG+AGG 0.582537 1.2:-29421833 None:intergenic
TCAACTAGTCCCCACTCATA+CGG 0.583299 1.2:-29422304 None:intergenic
CTGAACTCTCAACCCTCAGG+TGG 0.585301 1.2:-29422130 None:intergenic
ATGTTTATGGCTGAAATGGT+TGG 0.586242 1.2:-29421495 None:intergenic
CAATATATCATAACTATAGT+CGG 0.587091 1.2:-29421696 None:intergenic
ATAGTTATGATATATTGGCT+AGG 0.588752 1.2:+29421702 MS.gene53619:CDS
TTGGATGTTGTAATCGGCAA+GGG 0.594096 1.2:-29422255 None:intergenic
CTGGAATGACGCACCACCTG+AGG 0.596723 1.2:+29422117 MS.gene53619:CDS
GAATGCAAAACATGGTTGCA+AGG 0.607126 1.2:+29421367 MS.gene53619:CDS
AGACTTCAAGGAGACAATGA+AGG 0.608582 1.2:-29421552 None:intergenic
TGGAATGACGCACCACCTGA+GGG 0.642746 1.2:+29422118 MS.gene53619:CDS
GAAGAAGAAGATTCATGACA+AGG 0.649256 1.2:+29422169 MS.gene53619:CDS
ACTAGTCCCCACTCATACGG+AGG 0.651760 1.2:-29422301 None:intergenic
TAAGGGTCAGAAATAATCAA+GGG 0.655042 1.2:-29419484 None:intergenic
CGTCTTCCTCCGTATGAGTG+GGG 0.655237 1.2:+29422295 MS.gene53619:CDS
CATACGGAGGAAGACGTCGA+GGG 0.663639 1.2:-29422288 None:intergenic
TCATGTTCGAATGCAAAACA+TGG 0.669361 1.2:+29421359 MS.gene53619:CDS
CAAAGTCACATCCTGAAAGG+GGG 0.676119 1.2:-29421451 None:intergenic
GAGTTGCTAAAGGAACCTGT+TGG 0.678882 1.2:-29421769 None:intergenic
TCATACGGAGGAAGACGTCG+AGG 0.682545 1.2:-29422289 None:intergenic
GGAAATGGGAGGTACCCTGG+GGG 0.753311 1.2:-29421858 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTCTTTATTGATTTAA+TGG + chr1.2:29422056-29422075 MS.gene53619:intron 10.0%
!!! ATCTTTAATTTTCTAATTAT+TGG - chr1.2:29420521-29420540 None:intergenic 10.0%
!!! GTTTAAAATATCAAAATAAT+GGG - chr1.2:29420080-29420099 None:intergenic 10.0%
!!! TGTTTAAAATATCAAAATAA+TGG - chr1.2:29420081-29420100 None:intergenic 10.0%
!! AAATTAAAGATGAATATTAG+AGG + chr1.2:29420530-29420549 MS.gene53619:intron 15.0%
!! ATCTGCTAAAATAAAAAATA+AGG - chr1.2:29420189-29420208 None:intergenic 15.0%
!! TCTGCTAAAATAAAAAATAA+GGG - chr1.2:29420188-29420207 None:intergenic 15.0%
!! TTTAAACAACTTATACATAT+TGG + chr1.2:29419740-29419759 MS.gene53619:intron 15.0%
!!! TATGGTATTGAATAATTTTT+TGG - chr1.2:29419971-29419990 None:intergenic 15.0%
!! AAGACTTATTTGCTTTAATT+GGG + chr1.2:29420850-29420869 MS.gene53619:intron 20.0%
!! ATAATAACAAAACTTTAACC+AGG - chr1.2:29421907-29421926 None:intergenic 20.0%
!! CAATATATCATAACTATAGT+CGG - chr1.2:29421699-29421718 None:intergenic 20.0%
!! CATTAAAACTAAAAAACAGA+AGG - chr1.2:29420941-29420960 None:intergenic 20.0%
!! TAAAATAAAAAATAAGGGAC+CGG - chr1.2:29420183-29420202 None:intergenic 20.0%
!! TAAGACTTATTTGCTTTAAT+TGG + chr1.2:29420849-29420868 MS.gene53619:intron 20.0%
!! TAATAACAAAACTTTAACCA+GGG - chr1.2:29421906-29421925 None:intergenic 20.0%
!! TTTGAATATTACAAGTTACA+AGG + chr1.2:29420874-29420893 MS.gene53619:intron 20.0%
!!! AAACTTTTTGTTTTGTAGTT+TGG + chr1.2:29419694-29419713 MS.gene53619:intron 20.0%
!!! ACTTTTGTTTGATATGTAAA+AGG + chr1.2:29419625-29419644 MS.gene53619:intron 20.0%
!!! GTATTGAATAATTTTTTGGT+GGG - chr1.2:29419967-29419986 None:intergenic 20.0%
!!! TCTCAAATCAAATTTTCTTA+TGG + chr1.2:29421524-29421543 MS.gene53619:CDS 20.0%
!!! TTTTGTTTCTTTTAAATGCT+TGG + chr1.2:29420801-29420820 MS.gene53619:intron 20.0%
! AAAAAACCAAAGCATAGAAA+AGG - chr1.2:29421882-29421901 None:intergenic 25.0%
! AAAATCTATGTACTCAATGA+CGG - chr1.2:29421045-29421064 None:intergenic 25.0%
! AGAAAATAAGTTACACTGAT+AGG + chr1.2:29421390-29421409 MS.gene53619:CDS 25.0%
! ATAGATTTCTTTGTAAGTCT+TGG - chr1.2:29421132-29421151 None:intergenic 25.0%
! ATGATACCATCTTAGAATTT+GGG + chr1.2:29420386-29420405 MS.gene53619:intron 25.0%
! CGACTATAGTTATGATATAT+TGG + chr1.2:29421697-29421716 MS.gene53619:CDS 25.0%
! CTAAATATGAGTATACATGT+GGG - chr1.2:29420434-29420453 None:intergenic 25.0%
! GAGAATGATTAACTTTATGT+TGG + chr1.2:29421079-29421098 MS.gene53619:intron 25.0%
! TAAATATGAGTATACATGTG+GGG - chr1.2:29420433-29420452 None:intergenic 25.0%
! TATGATACCATCTTAGAATT+TGG + chr1.2:29420385-29420404 MS.gene53619:intron 25.0%
!! ATAGTTATGATATATTGGCT+AGG + chr1.2:29421702-29421721 MS.gene53619:CDS 25.0%
!! CTGTTAGTGTTTTCTATTTT+TGG + chr1.2:29422009-29422028 MS.gene53619:intron 25.0%
!! TGGTAGACAAAACATTATTT+TGG + chr1.2:29419714-29419733 MS.gene53619:intron 25.0%
!!! AAAGTAATGTCGTTTTTTAG+AGG - chr1.2:29420622-29420641 None:intergenic 25.0%
!!! AATAATAGAAGCATGCTTTT+GGG + chr1.2:29421629-29421648 MS.gene53619:CDS 25.0%
!!! ATTTTAGATAACTTGTACGT+GGG - chr1.2:29419926-29419945 None:intergenic 25.0%
!!! GGTATTGAATAATTTTTTGG+TGG - chr1.2:29419968-29419987 None:intergenic 25.0%
!!! TATTTTAGATAACTTGTACG+TGG - chr1.2:29419927-29419946 None:intergenic 25.0%
!!! TTGATTTGTAAAACTGTTTC+TGG + chr1.2:29419821-29419840 MS.gene53619:intron 25.0%
ACAACACTTGTCAAACTTTA+TGG - chr1.2:29419989-29420008 None:intergenic 30.0%
AGAGATAGTGATTCTGTTTA+AGG + chr1.2:29420772-29420791 MS.gene53619:intron 30.0%
ATAAGGGTCAGAAATAATCA+AGG - chr1.2:29419488-29419507 None:intergenic 30.0%
ATCCGCTAAAAAATGAAGAT+AGG + chr1.2:29419772-29419791 MS.gene53619:intron 30.0%
CAAAGCATAGAAAAGGAAAT+GGG - chr1.2:29421875-29421894 None:intergenic 30.0%
CAAATCAAACACATTACAAC+TGG + chr1.2:29420146-29420165 MS.gene53619:intron 30.0%
CCACATGTATACTCATATTT+AGG + chr1.2:29420432-29420451 MS.gene53619:intron 30.0%
CCTAAATATGAGTATACATG+TGG - chr1.2:29420435-29420454 None:intergenic 30.0%
CCTCTAAATCGAGAAAATAA+AGG - chr1.2:29420590-29420609 None:intergenic 30.0%
GAAAGACTGTAATTTCAGTT+TGG - chr1.2:29421738-29421757 None:intergenic 30.0%
GTAACTCTGATAAGAGTTAA+GGG + chr1.2:29419601-29419620 MS.gene53619:intron 30.0%
TAAGGGTCAGAAATAATCAA+GGG - chr1.2:29419487-29419506 None:intergenic 30.0%
TGAAAGATGGGAATAGTTAA+GGG - chr1.2:29419538-29419557 None:intergenic 30.0%
TGTAACTCTGATAAGAGTTA+AGG + chr1.2:29419600-29419619 MS.gene53619:intron 30.0%
TTAATGTGCTATGAACTTCT+TGG + chr1.2:29420955-29420974 MS.gene53619:intron 30.0%
TTGTAGGCAACATAAAAGAA+TGG + chr1.2:29420663-29420682 MS.gene53619:intron 30.0%
TTTGAGAATCCCTATGTTTA+TGG - chr1.2:29421511-29421530 None:intergenic 30.0%
! AACACTTTTCAGTGTGATAA+TGG + chr1.2:29421218-29421237 MS.gene53619:intron 30.0%
! ATTTTCCTCTTGAAGAACAA+TGG - chr1.2:29421588-29421607 None:intergenic 30.0%
!! AATAGCTTTACAACGTTTTG+AGG - chr1.2:29421312-29421331 None:intergenic 30.0%
!! CAATAATAGAAGCATGCTTT+TGG + chr1.2:29421628-29421647 MS.gene53619:CDS 30.0%
!! GTTTTTCAAATGCCAAACAA+AGG + chr1.2:29421986-29422005 MS.gene53619:intron 30.0%
!! TTTTCTTGTGTTGTTCTGTT+TGG - chr1.2:29419657-29419676 None:intergenic 30.0%
!!! CCTTTATTTTCTCGATTTAG+AGG + chr1.2:29420587-29420606 MS.gene53619:intron 30.0%
!!! GTCCTATCTTCATTTTTTAG+CGG - chr1.2:29419777-29419796 None:intergenic 30.0%
!!! TACATCACAACTTTTTTGTC+AGG - chr1.2:29420113-29420132 None:intergenic 30.0%
!!! TGTCGTTTTTTAGAGGAATT+TGG - chr1.2:29420615-29420634 None:intergenic 30.0%
AAACACTAACAGCCTTTGTT+TGG - chr1.2:29422001-29422020 None:intergenic 35.0%
ACCATTTCAGCCATAAACAT+AGG + chr1.2:29421498-29421517 MS.gene53619:CDS 35.0%
ACTATAGAGACACAACACTT+AGG + chr1.2:29420700-29420719 MS.gene53619:intron 35.0%
ATGTTTATGGCTGAAATGGT+TGG - chr1.2:29421498-29421517 None:intergenic 35.0%
ATTCCTAAGTTTAGTACAGC+AGG - chr1.2:29421261-29421280 None:intergenic 35.0%
CCAAAGCATAGAAAAGGAAA+TGG - chr1.2:29421876-29421895 None:intergenic 35.0%
CCATTTCAGCCATAAACATA+GGG + chr1.2:29421499-29421518 MS.gene53619:CDS 35.0%
CTATAGAGACACAACACTTA+GGG + chr1.2:29420701-29420720 MS.gene53619:intron 35.0%
CTGAAAGATGGGAATAGTTA+AGG - chr1.2:29419539-29419558 None:intergenic 35.0%
CTTAACTATTCCCATCTTTC+AGG + chr1.2:29419537-29419556 MS.gene53619:CDS 35.0%
CTTCTCTTGGATGTTGTAAT+CGG - chr1.2:29422264-29422283 None:intergenic 35.0%
GAAATGCATACCTGAAAGAT+GGG - chr1.2:29419550-29419569 None:intergenic 35.0%
GAAGAAGAAGATTCATGACA+AGG + chr1.2:29422169-29422188 MS.gene53619:CDS 35.0%
GGTTTCATCATTAGACTTCA+AGG - chr1.2:29421567-29421586 None:intergenic 35.0%
GTTCTTCAAGAGGAAAATGA+TGG + chr1.2:29421590-29421609 MS.gene53619:CDS 35.0%
TACCATCTTAGAATTTGGGT+TGG + chr1.2:29420390-29420409 MS.gene53619:intron 35.0%
TCATGTTCGAATGCAAAACA+TGG + chr1.2:29421359-29421378 MS.gene53619:CDS 35.0%
TCTGATGAAAGAGTTGCTAA+AGG - chr1.2:29421782-29421801 None:intergenic 35.0%
TGAAACCATTGTTCTTCAAG+AGG + chr1.2:29421580-29421599 MS.gene53619:CDS 35.0%
TGAAATGCATACCTGAAAGA+TGG - chr1.2:29419551-29419570 None:intergenic 35.0%
TGCAGCAATCAAGCAAATAA+GGG - chr1.2:29419504-29419523 None:intergenic 35.0%
TTGCAGCAATCAAGCAAATA+AGG - chr1.2:29419505-29419524 None:intergenic 35.0%
! AGTTAAGAGACCTGCATTTT+TGG - chr1.2:29420303-29420322 None:intergenic 35.0%
! ATGCAAATATCTAGCTTGAG+AGG - chr1.2:29421836-29421855 None:intergenic 35.0%
! CAAATAAGTCTTATCCTCCA+AGG - chr1.2:29420842-29420861 None:intergenic 35.0%
! CCATTTCCTTTTCTATGCTT+TGG + chr1.2:29421873-29421892 MS.gene53619:intron 35.0%
!! GGATGAGTTATTTTATGCCT+TGG + chr1.2:29420822-29420841 MS.gene53619:intron 35.0%
!! TGAGTTATTTTATGCCTTGG+AGG + chr1.2:29420825-29420844 MS.gene53619:intron 35.0%
!! TGTAAAACTGTTTCTGGAAC+AGG + chr1.2:29419827-29419846 MS.gene53619:intron 35.0%
!!! TATGCTTTGGTTTTTTTCCC+TGG + chr1.2:29421886-29421905 MS.gene53619:intron 35.0%
AAAGCCACATAAGAAGAGGA+GGG - chr1.2:29420645-29420664 None:intergenic 40.0%
ACAAATTGGAGTCAATGGAC+AGG + chr1.2:29419850-29419869 MS.gene53619:intron 40.0%
ACAACTGGAGTTATCTTGTC+CGG + chr1.2:29420161-29420180 MS.gene53619:intron 40.0%
ACAGGACAAATTGGAGTCAA+TGG + chr1.2:29419845-29419864 MS.gene53619:intron 40.0%
AGACTTCAAGGAGACAATGA+AGG - chr1.2:29421555-29421574 None:intergenic 40.0%
AGAGGTTCAGAAGAACCAAA+TGG - chr1.2:29421818-29421837 None:intergenic 40.0%
AGATATTTGCATAACCCCCA+GGG + chr1.2:29421844-29421863 MS.gene53619:CDS 40.0%
AGCAAAGTCACATCCTGAAA+GGG - chr1.2:29421456-29421475 None:intergenic 40.0%
AGCATAGAAAAGGAAATGGG+AGG - chr1.2:29421872-29421891 None:intergenic 40.0%
AGGGAGAAACGAAGATAATG+AGG + chr1.2:29420720-29420739 MS.gene53619:intron 40.0%
CAAATCAAACGCAGTACAAC+TGG - chr1.2:29419809-29419828 None:intergenic 40.0%
CACGAAACTCTATTGTGTTG+CGG + chr1.2:29420255-29420274 MS.gene53619:intron 40.0%
CCCTATGTTTATGGCTGAAA+TGG - chr1.2:29421502-29421521 None:intergenic 40.0%
CTACAAAGCCACATAAGAAG+AGG - chr1.2:29420649-29420668 None:intergenic 40.0%
CTACCTGCTGTACTAAACTT+AGG + chr1.2:29421255-29421274 MS.gene53619:CDS 40.0%
GAATGCAAAACATGGTTGCA+AGG + chr1.2:29421367-29421386 MS.gene53619:CDS 40.0%
GAGTTTCTCGTGATTCCATT+TGG + chr1.2:29421800-29421819 MS.gene53619:CDS 40.0%
GTACGACGATGATGAATAAG+TGG + chr1.2:29420747-29420766 MS.gene53619:intron 40.0%
GTACTGAACAGAACAACACA+AGG - chr1.2:29420036-29420055 None:intergenic 40.0%
GTGTCTCTATAGTGACAACT+TGG - chr1.2:29420693-29420712 None:intergenic 40.0%
TAGATATTTGCATAACCCCC+AGG + chr1.2:29421843-29421862 MS.gene53619:CDS 40.0%
TGGGACAAAAAGTTGTGTTG+TGG - chr1.2:29419907-29419926 None:intergenic 40.0%
TTGGATGTTGTAATCGGCAA+GGG - chr1.2:29422258-29422277 None:intergenic 40.0%
! CTTTTGCGGTAAACAACTAG+AGG + chr1.2:29422223-29422242 MS.gene53619:CDS 40.0%
! GTCCAACCCAAATTCTAAGA+TGG - chr1.2:29420395-29420414 None:intergenic 40.0%
!! CTCTTCTTATGTGGCTTTGT+AGG + chr1.2:29420647-29420666 MS.gene53619:intron 40.0%
!! GTTTCTGGAACAGGACAAAT+TGG + chr1.2:29419836-29419855 MS.gene53619:intron 40.0%
!! TAGAATTTGGGTTGGACCTA+TGG + chr1.2:29420398-29420417 MS.gene53619:intron 40.0%
ACTCTCCAGATGTCAAGTCA+TGG - chr1.2:29420331-29420350 None:intergenic 45.0%
AGCAGACTTTGCTGGTGTAT+TGG - chr1.2:29422203-29422222 None:intergenic 45.0%
AGGCAGAACAGCAAAACACA+AGG - chr1.2:29420016-29420035 None:intergenic 45.0%
AGTGACTTGAGTGGCCTATA+GGG + chr1.2:29420348-29420367 MS.gene53619:intron 45.0%
ATCTACATAGCAACCCAGAC+TGG + chr1.2:29422098-29422117 MS.gene53619:CDS 45.0%
ATCTGCAGCACCAAAAATGC+AGG + chr1.2:29420290-29420309 MS.gene53619:intron 45.0%
CAAAGCCACATAAGAAGAGG+AGG - chr1.2:29420646-29420665 None:intergenic 45.0%
CAAAGTCACATCCTGAAAGG+GGG - chr1.2:29421454-29421473 None:intergenic 45.0%
CAGCAAAGTCACATCCTGAA+AGG - chr1.2:29421457-29421476 None:intergenic 45.0%
CTCTCCAGATGTCAAGTCAT+GGG - chr1.2:29420330-29420349 None:intergenic 45.0%
CTTGGATGTTGTAATCGGCA+AGG - chr1.2:29422259-29422278 None:intergenic 45.0%
CTTTCCCTCCTCTTCTTATG+TGG + chr1.2:29420638-29420657 MS.gene53619:intron 45.0%
GAGTTGCTAAAGGAACCTGT+TGG - chr1.2:29421772-29421791 None:intergenic 45.0%
GCAAAGTCACATCCTGAAAG+GGG - chr1.2:29421455-29421474 None:intergenic 45.0%
GCAGACTTTGCTGGTGTATT+GGG - chr1.2:29422202-29422221 None:intergenic 45.0%
GCAGTCAATCTTTGCTGCAT+TGG + chr1.2:29421656-29421675 MS.gene53619:CDS 45.0%
GTCTATCCAAACACCCCTAT+AGG - chr1.2:29420365-29420384 None:intergenic 45.0%
TAGTCGGACTCAGAAGAGTT+AGG - chr1.2:29421683-29421702 None:intergenic 45.0%
TTTCGTGAAGAACGTCCAAC+AGG + chr1.2:29421754-29421773 MS.gene53619:CDS 45.0%
! ACCATACCGCTATAGCGTTT+TGG + chr1.2:29421005-29421024 MS.gene53619:intron 45.0%
! ATACCGCTATAGCGTTTTGG+GGG + chr1.2:29421008-29421027 MS.gene53619:intron 45.0%
! CAGCAAAGTCTGCTCTTTTG+CGG + chr1.2:29422209-29422228 MS.gene53619:CDS 45.0%
! CATACCGCTATAGCGTTTTG+GGG + chr1.2:29421007-29421026 MS.gene53619:intron 45.0%
! CCATACCGCTATAGCGTTTT+GGG + chr1.2:29421006-29421025 MS.gene53619:intron 45.0%
ACGTCTTCCTCCGTATGAGT+GGG + chr1.2:29422294-29422313 MS.gene53619:CDS 50.0%
CACTCCCATGACTTGACATC+TGG + chr1.2:29420323-29420342 MS.gene53619:intron 50.0%
CATCTGGAGAGTGACTTGAG+TGG + chr1.2:29420339-29420358 MS.gene53619:intron 50.0%
CCCAAAACGCTATAGCGGTA+TGG - chr1.2:29421009-29421028 None:intergenic 50.0%
CGCAAAAGAGCAGACTTTGC+TGG - chr1.2:29422211-29422230 None:intergenic 50.0%
GAGTGACTTGAGTGGCCTAT+AGG + chr1.2:29420347-29420366 MS.gene53619:intron 50.0%
GTGACTTGAGTGGCCTATAG+GGG + chr1.2:29420349-29420368 MS.gene53619:intron 50.0%
TAGCCCCCAAAACGCTATAG+CGG - chr1.2:29421014-29421033 None:intergenic 50.0%
TGTCTGAACTCTCAACCCTC+AGG - chr1.2:29422136-29422155 None:intergenic 50.0%
TGTTGTAATCGGCAAGGGTC+AGG - chr1.2:29422253-29422272 None:intergenic 50.0%
! TGTGGGGCATTTCTCACCAT+AGG - chr1.2:29420417-29420436 None:intergenic 50.0%
!! AAAGGAAATGGGAGGTACCC+TGG - chr1.2:29421864-29421883 None:intergenic 50.0%
!! AAGGAAATGGGAGGTACCCT+GGG - chr1.2:29421863-29421882 None:intergenic 50.0%
CATACGGAGGAAGACGTCGA+GGG - chr1.2:29422291-29422310 None:intergenic 55.0%
CCATGTTACTGCCCCCTTTC+AGG + chr1.2:29421440-29421459 MS.gene53619:CDS 55.0%
CCTGAAAGGGGGCAGTAACA+TGG - chr1.2:29421443-29421462 None:intergenic 55.0%
CGTCTTCCTCCGTATGAGTG+GGG + chr1.2:29422295-29422314 MS.gene53619:CDS 55.0%
CTGAACTCTCAACCCTCAGG+TGG - chr1.2:29422133-29422152 None:intergenic 55.0%
GACGTCTTCCTCCGTATGAG+TGG + chr1.2:29422293-29422312 MS.gene53619:CDS 55.0%
GTGGTGCGTCATTCCAGTCT+GGG - chr1.2:29422114-29422133 None:intergenic 55.0%
TCATACGGAGGAAGACGTCG+AGG - chr1.2:29422292-29422311 None:intergenic 55.0%
TGGAATGACGCACCACCTGA+GGG + chr1.2:29422118-29422137 MS.gene53619:CDS 55.0%
! CGTCGAGGGTTGACTTCTCT+TGG - chr1.2:29422277-29422296 None:intergenic 55.0%
!! AGGAAATGGGAGGTACCCTG+GGG - chr1.2:29421862-29421881 None:intergenic 55.0%
!! GAGTGGCCTATAGGGGTGTT+TGG + chr1.2:29420356-29420375 MS.gene53619:intron 55.0%
CTGGAATGACGCACCACCTG+AGG + chr1.2:29422117-29422136 MS.gene53619:CDS 60.0%
GGTGGTGCGTCATTCCAGTC+TGG - chr1.2:29422115-29422134 None:intergenic 60.0%
!! GGAAATGGGAGGTACCCTGG+GGG - chr1.2:29421861-29421880 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 29419478 29422322 29419478 ID=MS.gene53619
chr1.2 mRNA 29419478 29422322 29419478 ID=MS.gene53619.t1;Parent=MS.gene53619
chr1.2 exon 29419478 29419558 29419478 ID=MS.gene53619.t1.exon1;Parent=MS.gene53619.t1
chr1.2 CDS 29419478 29419558 29419478 ID=cds.MS.gene53619.t1;Parent=MS.gene53619.t1
chr1.2 exon 29421230 29421865 29421230 ID=MS.gene53619.t1.exon2;Parent=MS.gene53619.t1
chr1.2 CDS 29421230 29421865 29421230 ID=cds.MS.gene53619.t1;Parent=MS.gene53619.t1
chr1.2 exon 29422092 29422322 29422092 ID=MS.gene53619.t1.exon3;Parent=MS.gene53619.t1
chr1.2 CDS 29422092 29422322 29422092 ID=cds.MS.gene53619.t1;Parent=MS.gene53619.t1
Gene Sequence

>MS.gene53619

ATGGAGCCCTTGATTATTTCTGACCCTTATTTGCTTGATTGCTGCAAATGTTTTGAACCCTTAACTATTCCCATCTTTCAGGTATGCATTTCATTCTTTTTATTTTATTTAATAAGTTAGTTTGTAACTCTGATAAGAGTTAAGGGTACTTTTGTTTGATATGTAAAAGGTAAATACCAAACAGAACAACACAAGAAAAAACAAAACAACACAAACAAACTTTTTGTTTTGTAGTTTGGTAGACAAAACATTATTTTGGTGTTTTAAACAACTTATACATATTGGATGCATTTGATCCGCTAAAAAATGAAGATAGGACATGACAACTCCAGTTGTACTGCGTTTGATTTGTAAAACTGTTTCTGGAACAGGACAAATTGGAGTCAATGGACAGGACAAAAACAAAAATTTTTGTCTCTCACTAAACCACAACACAACTTTTTGTCCCACGTACAAGTTATCTAAAATACAAAAAATAACTTTTTGCCCACCAAAAAATTATTCAATACCATAAAGTTTGACAAGTGTTGTTCTGCCTTGTGTTTTGCTGTTCTGCCTTGTGTTGTTCTGTTCAGTACAAATTTAGCAAATCAAACGCACCCATTATTTTGATATTTTAAACAACTTATACACCTGACAAAAAAGTTGTGATGTAATTTAAACAACTTCAAATCAAACACATTACAACTGGAGTTATCTTGTCCGGTCCCTTATTTTTTATTTTAGCAGATCAAGCTCACACTAATTTGTCGTCATATATGCACTTGAGCGTAACGACACGAAACTCTATTGTGTTGCGGTTTCTGTAGTGCATCTGCAGCACCAAAAATGCAGGTCTCTTAACTCACTCCCATGACTTGACATCTGGAGAGTGACTTGAGTGGCCTATAGGGGTGTTTGGATAGACTATGATACCATCTTAGAATTTGGGTTGGACCTATGGTGAGAAATGCCCCACATGTATACTCATATTTAGGCTTTATCTCATGTGAGACTCTTAACAAGTAATTCACTTTATAAGTTAAAGTACTTATTATTAACCAATAATTAGAAAATTAAAGATGAATATTAGAGGTACATCATAACAATCAAGAGTTTTAAGTTAACGACCTTTATTTTCTCGATTTAGAGGAGCCAAATTCCTCTAAAAAACGACATTACTTTCCCTCCTCTTCTTATGTGGCTTTGTAGGCAACATAAAAGAATGGAGAACCAAGTTGTCACTATAGAGACACAACACTTAGGGAGAAACGAAGATAATGAGGTTTAGTACGACGATGATGAATAAGTGGTTAGAGATAGTGATTCTGTTTAAGGAATCACTTTTGTTTCTTTTAAATGCTTGGATGAGTTATTTTATGCCTTGGAGGATAAGACTTATTTGCTTTAATTGGGTTTTGAATATTACAAGTTACAAGGAAATTTGATTACTAATTATGAATGTCTTTAATTTTGTATATCCTTCTGTTTTTTAGTTTTAATGTGCTATGAACTTCTTGGATTGTTTCTCTAAACTCTGATATAGCGACCATACCGCTATAGCGTTTTGGGGGCTAGCTGCGATCCGTCATTGAGTACATAGATTTTGAGAAGAATAAGTTGAGAATGATTAACTTTATGTTGGTTATATTTTTGATTGAATAACTTGCTACCAAGACTTACAAAGAAATCTATTATTTTATTTTATTTTATTCTAACAAATGATTCAAAGTCTAATTTGATGATTTTCTTTCATGTTGCAACACTTTTCAGTGTGATAATGGTCATATTGTTTGCTCTACCTGCTGTACTAAACTTAGGAATAAGTGTCATGAGTGCTCATTGCGCATCACCTCAAAACGTTGTAAAGCTATTGAGAATCTATTGCTATCTATCGAAATGTCATGTTCGAATGCAAAACATGGTTGCAAGGAGAAAATAAGTTACACTGATAGGAAGCATGAAGAAGAATGCAACTACATACCATGTTACTGCCCCCTTTCAGGATGTGACTTTGCTGCATCATCAGAAGTGTTGTCCAACCATTTCAGCCATAAACATAGGGATTCTCAAATCAAATTTTCTTATGGTCACTCCTTCATTGTCTCCTTGAAGTCTAATGATGAAACCATTGTTCTTCAAGAGGAAAATGATGGTAAACTATTTATTCTCAATAATAGAAGCATGCTTTTGGGAAATGCAGTCAATCTTTGCTGCATTGGTCCTAACTCTTCTGAGTCCGACTATAGTTATGATATATTGGCTAGGTCTCAGATATCCAAACTGAAATTACAGTCTTTCGTGAAGAACGTCCAACAGGTTCCTTTAGCAACTCTTTCATCAGAGTTTCTCGTGATTCCATTTGGTTCTTCTGAACCTCTCAAGCTAGATATTTGCATAACCCCCAGGGTACCTCCCATTTCCTTTTCTATGCTTTGGTTTTTTTCCCTGGTTAAAGTTTTGTTATTATTATTATGATTTTTTTTTTATATTTTAAATTTTTATTCTAGCATTTTATCTTATTCTTCAGTTTTTCAAATGCCAAACAAAGGCTGTTAGTGTTTTCTATTTTTGGATCAGTTTTGAAATATCAATCTCAAATTTTCTTTATTGATTTAATGGCAATTTTGTGCAGATGCAAATCTACATAGCAACCCAGACTGGAATGACGCACCACCTGAGGGTTGAGAGTTCAGACAAGATAGTCAATGTGAAGAAGAAGATTCATGACAAGGAATATATCCCAATACACCAGCAAAGTCTGCTCTTTTGCGGTAAACAACTAGAGGACAACCTGACCCTTGCCGATTACAACATCCAAGAGAAGTCAACCCTCGACGTCTTCCTCCGTATGAGTGGGGACTAG

Protein sequence

>MS.gene53619.t1

MEPLIISDPYLLDCCKCFEPLTIPIFQCDNGHIVCSTCCTKLRNKCHECSLRITSKRCKAIENLLLSIEMSCSNAKHGCKEKISYTDRKHEEECNYIPCYCPLSGCDFAASSEVLSNHFSHKHRDSQIKFSYGHSFIVSLKSNDETIVLQEENDGKLFILNNRSMLLGNAVNLCCIGPNSSESDYSYDILARSQISKLKLQSFVKNVQQVPLATLSSEFLVIPFGSSEPLKLDICITPRMQIYIATQTGMTHHLRVESSDKIVNVKKKIHDKEYIPIHQQSLLFCGKQLEDNLTLADYNIQEKSTLDVFLRMSGD