Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063583.t1 | RHN56826.1 | 69.1 | 246 | 75 | 1 | 3 | 247 | 106 | 351 | 3.70E-88 | 334.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063583.t1 | Q84K34 | 31.4 | 172 | 114 | 2 | 1 | 168 | 169 | 340 | 8.5e-17 | 89.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063583.t1 | G7KFS7 | 69.1 | 246 | 75 | 1 | 3 | 247 | 143 | 388 | 2.7e-88 | 334.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063583.t1 | MTR_5g076720 | 68.548 | 248 | 77 | 1 | 1 | 247 | 141 | 388 | 1.82e-116 | 339 |
MS.gene063583.t1 | MTR_5g076810 | 65.447 | 246 | 82 | 2 | 1 | 245 | 23 | 266 | 2.35e-109 | 316 |
MS.gene063583.t1 | MTR_5g067400 | 64.082 | 245 | 86 | 1 | 1 | 245 | 70 | 312 | 1.58e-105 | 308 |
MS.gene063583.t1 | MTR_1g046650 | 63.563 | 247 | 87 | 2 | 1 | 247 | 1 | 244 | 6.24e-104 | 301 |
MS.gene063583.t1 | MTR_1g046650 | 63.563 | 247 | 87 | 2 | 1 | 247 | 70 | 313 | 8.38e-103 | 301 |
MS.gene063583.t1 | MTR_7g024290 | 64.634 | 246 | 84 | 2 | 1 | 245 | 70 | 313 | 1.07e-102 | 301 |
MS.gene063583.t1 | MTR_1g046650 | 63.563 | 247 | 87 | 2 | 1 | 247 | 70 | 313 | 1.10e-102 | 301 |
MS.gene063583.t1 | MTR_1g046650 | 63.563 | 247 | 87 | 2 | 1 | 247 | 101 | 344 | 5.32e-102 | 300 |
MS.gene063583.t1 | MTR_1g046640 | 62.449 | 245 | 89 | 2 | 1 | 245 | 70 | 311 | 1.44e-99 | 293 |
MS.gene063583.t1 | MTR_2g038420 | 62.000 | 250 | 92 | 2 | 1 | 247 | 84 | 333 | 5.19e-99 | 292 |
MS.gene063583.t1 | MTR_5g076520 | 61.633 | 245 | 92 | 2 | 1 | 243 | 70 | 314 | 3.84e-98 | 290 |
MS.gene063583.t1 | MTR_5g076505 | 58.943 | 246 | 100 | 1 | 1 | 245 | 66 | 311 | 2.45e-95 | 282 |
MS.gene063583.t1 | MTR_7g094390 | 59.592 | 245 | 97 | 1 | 1 | 245 | 231 | 473 | 4.43e-95 | 287 |
MS.gene063583.t1 | MTR_2g038430 | 58.140 | 258 | 97 | 2 | 1 | 247 | 84 | 341 | 7.86e-95 | 282 |
MS.gene063583.t1 | MTR_5g061290 | 56.800 | 250 | 105 | 1 | 1 | 247 | 76 | 325 | 8.67e-94 | 279 |
MS.gene063583.t1 | MTR_5g076660 | 57.661 | 248 | 100 | 2 | 1 | 245 | 92 | 337 | 1.02e-89 | 269 |
MS.gene063583.t1 | MTR_5g076370 | 55.777 | 251 | 105 | 3 | 1 | 248 | 93 | 340 | 3.71e-86 | 260 |
MS.gene063583.t1 | MTR_5g076820 | 62.745 | 204 | 72 | 3 | 1 | 201 | 77 | 279 | 1.24e-80 | 244 |
MS.gene063583.t1 | MTR_5g076540 | 70.440 | 159 | 47 | 0 | 1 | 159 | 70 | 228 | 3.53e-75 | 229 |
MS.gene063583.t1 | MTR_5g077020 | 68.675 | 166 | 46 | 3 | 5 | 168 | 45 | 206 | 5.85e-69 | 212 |
MS.gene063583.t1 | MTR_4g058025 | 70.435 | 115 | 33 | 1 | 12 | 125 | 14 | 128 | 3.74e-48 | 157 |
MS.gene063583.t1 | MTR_4g094468 | 40.237 | 169 | 96 | 3 | 1 | 166 | 156 | 322 | 2.37e-33 | 123 |
MS.gene063583.t1 | MTR_7g105080 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 3.80e-14 | 67.8 |
MS.gene063583.t1 | MTR_3g092130 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 3.80e-14 | 67.8 |
MS.gene063583.t1 | MTR_1g059690 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 3.80e-14 | 67.8 |
MS.gene063583.t1 | MTR_3g092130 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 3.84e-14 | 68.2 |
MS.gene063583.t1 | MTR_4g088485 | 45.122 | 82 | 45 | 0 | 164 | 245 | 128 | 209 | 4.31e-14 | 69.7 |
MS.gene063583.t1 | MTR_4g088485 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 3.32e-13 | 67.0 |
MS.gene063583.t1 | MTR_7g116360 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 4.47e-14 | 69.7 |
MS.gene063583.t1 | MTR_7g116360 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 4.47e-14 | 69.7 |
MS.gene063583.t1 | MTR_7g116360 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 3.03e-13 | 67.4 |
MS.gene063583.t1 | MTR_1g066390 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 4.50e-14 | 69.7 |
MS.gene063583.t1 | MTR_1g066390 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 4.50e-14 | 69.7 |
MS.gene063583.t1 | MTR_1g066390 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 3.13e-13 | 67.4 |
MS.gene063583.t1 | MTR_5g092700 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.47e-14 | 67.8 |
MS.gene063583.t1 | MTR_4g073580 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.47e-14 | 67.8 |
MS.gene063583.t1 | MTR_4g080920 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 7.57e-14 | 69.3 |
MS.gene063583.t1 | MTR_4g080920 | 48.611 | 72 | 37 | 0 | 174 | 245 | 1 | 72 | 2.21e-12 | 65.1 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 9.54e-14 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 9.54e-14 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.20e-13 | 67.4 |
MS.gene063583.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 9.76e-14 | 69.7 |
MS.gene063583.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 9.76e-14 | 69.7 |
MS.gene063583.t1 | MTR_4g081010 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 5.95e-13 | 67.4 |
MS.gene063583.t1 | MTR_6g061930 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.08e-13 | 69.7 |
MS.gene063583.t1 | MTR_6g061930 | 45.122 | 82 | 45 | 0 | 164 | 245 | 204 | 285 | 1.08e-13 | 69.7 |
MS.gene063583.t1 | MTR_6g061930 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 7.86e-13 | 67.0 |
MS.gene063583.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.09e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.09e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.09e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g081010 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.91e-13 | 67.4 |
MS.gene063583.t1 | MTR_7g116360 | 45.122 | 82 | 45 | 0 | 164 | 245 | 115 | 196 | 1.10e-13 | 69.3 |
MS.gene063583.t1 | MTR_7g116360 | 45.122 | 82 | 45 | 0 | 164 | 245 | 191 | 272 | 1.10e-13 | 69.3 |
MS.gene063583.t1 | MTR_7g116360 | 42.000 | 100 | 56 | 1 | 146 | 245 | 23 | 120 | 5.40e-13 | 67.4 |
MS.gene063583.t1 | MTR_4g073580 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.38e-13 | 67.4 |
MS.gene063583.t1 | MTR_8g081020 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.38e-13 | 70.1 |
MS.gene063583.t1 | MTR_8g081020 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.38e-13 | 70.1 |
MS.gene063583.t1 | MTR_8g081020 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.38e-13 | 70.1 |
MS.gene063583.t1 | MTR_8g081020 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 1.38e-13 | 70.1 |
MS.gene063583.t1 | MTR_8g081020 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 8.26e-13 | 67.8 |
MS.gene063583.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.46e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.46e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 1.46e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.94e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g091580 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 8.82e-13 | 67.8 |
MS.gene063583.t1 | MTR_8g088060 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.46e-13 | 67.0 |
MS.gene063583.t1 | MTR_4g080797 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.52e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g080797 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.52e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g080797 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.52e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g080797 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 1.52e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g080797 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 9.25e-13 | 67.4 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.52e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.52e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.52e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 1.52e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 9.25e-13 | 67.4 |
MS.gene063583.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.56e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.56e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.56e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 1.56e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g081010 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 9.43e-13 | 67.4 |
MS.gene063583.t1 | MTR_5g033960 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.65e-13 | 66.6 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.78e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.78e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.78e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 1.78e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 1.78e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.04e-12 | 67.8 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.78e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.78e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.78e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 1.78e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 1.78e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.04e-12 | 67.8 |
MS.gene063583.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.90e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.90e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.90e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 1.90e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 447 | 528 | 1.90e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 8.16e-13 | 68.2 |
MS.gene063583.t1 | MTR_4g091580 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.11e-12 | 67.8 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.99e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.99e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.99e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 1.99e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 1.99e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 447 | 528 | 1.99e-13 | 69.7 |
MS.gene063583.t1 | MTR_8g018230 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.16e-12 | 67.4 |
MS.gene063583.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 2.05e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 2.05e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 2.05e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 2.05e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 2.05e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 447 | 528 | 2.05e-13 | 69.7 |
MS.gene063583.t1 | MTR_4g081010 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.20e-12 | 67.4 |
MS.gene063583.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 3.10e-13 | 69.3 |
MS.gene063583.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 3.10e-13 | 69.3 |
MS.gene063583.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 3.10e-13 | 69.3 |
MS.gene063583.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 3.10e-13 | 69.3 |
MS.gene063583.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 3.10e-13 | 69.3 |
MS.gene063583.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 447 | 528 | 3.10e-13 | 69.3 |
MS.gene063583.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 523 | 604 | 3.10e-13 | 69.3 |
MS.gene063583.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 599 | 680 | 3.10e-13 | 69.3 |
MS.gene063583.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 675 | 756 | 3.10e-13 | 69.3 |
MS.gene063583.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 751 | 832 | 3.10e-13 | 69.3 |
MS.gene063583.t1 | MTR_4g088495 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 9.68e-13 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063583.t1 | AT5G37930 | 31.395 | 172 | 114 | 2 | 1 | 168 | 169 | 340 | 3.21e-19 | 85.9 |
MS.gene063583.t1 | AT4G05050 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.19e-14 | 69.7 |
MS.gene063583.t1 | AT4G05050 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 8.83e-14 | 67.4 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.19e-14 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 8.83e-14 | 67.4 |
MS.gene063583.t1 | AT5G37640 | 45.122 | 82 | 45 | 0 | 164 | 245 | 69 | 150 | 4.64e-14 | 70.9 |
MS.gene063583.t1 | AT5G37640 | 45.783 | 83 | 44 | 1 | 164 | 245 | 221 | 303 | 1.12e-11 | 64.3 |
MS.gene063583.t1 | AT5G37640 | 42.683 | 82 | 47 | 0 | 164 | 245 | 145 | 226 | 2.85e-11 | 62.8 |
MS.gene063583.t1 | AT3G52590 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 4.65e-14 | 67.4 |
MS.gene063583.t1 | AT2G36170 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 4.65e-14 | 67.4 |
MS.gene063583.t1 | AT4G05050 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 4.68e-14 | 69.7 |
MS.gene063583.t1 | AT4G05050 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 4.68e-14 | 69.7 |
MS.gene063583.t1 | AT4G05050 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 3.17e-13 | 67.4 |
MS.gene063583.t1 | AT4G05050 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 4.68e-14 | 69.7 |
MS.gene063583.t1 | AT4G05050 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 4.68e-14 | 69.7 |
MS.gene063583.t1 | AT4G05050 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 3.17e-13 | 67.4 |
MS.gene063583.t1 | AT4G05050 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 4.68e-14 | 69.7 |
MS.gene063583.t1 | AT4G05050 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 4.68e-14 | 69.7 |
MS.gene063583.t1 | AT4G05050 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 3.17e-13 | 67.4 |
MS.gene063583.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 4.68e-14 | 69.7 |
MS.gene063583.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 4.68e-14 | 69.7 |
MS.gene063583.t1 | AT4G02890 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 3.17e-13 | 67.4 |
MS.gene063583.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 4.68e-14 | 69.7 |
MS.gene063583.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 4.68e-14 | 69.7 |
MS.gene063583.t1 | AT4G02890 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 3.17e-13 | 67.4 |
MS.gene063583.t1 | AT1G55060 | 46.341 | 82 | 44 | 0 | 164 | 245 | 67 | 148 | 4.94e-14 | 69.7 |
MS.gene063583.t1 | AT1G55060 | 42.683 | 82 | 47 | 0 | 164 | 245 | 143 | 224 | 1.05e-11 | 63.2 |
MS.gene063583.t1 | AT2G35635 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 9.21e-14 | 67.4 |
MS.gene063583.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.02e-13 | 69.7 |
MS.gene063583.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.02e-13 | 69.7 |
MS.gene063583.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.02e-13 | 69.7 |
MS.gene063583.t1 | AT5G03240 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.56e-13 | 67.4 |
MS.gene063583.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.02e-13 | 69.7 |
MS.gene063583.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.02e-13 | 69.7 |
MS.gene063583.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.02e-13 | 69.7 |
MS.gene063583.t1 | AT5G03240 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.56e-13 | 67.4 |
MS.gene063583.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.02e-13 | 69.7 |
MS.gene063583.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.02e-13 | 69.7 |
MS.gene063583.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.02e-13 | 69.7 |
MS.gene063583.t1 | AT5G03240 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.56e-13 | 67.4 |
MS.gene063583.t1 | AT5G20620 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.02e-13 | 69.7 |
MS.gene063583.t1 | AT5G20620 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.02e-13 | 69.7 |
MS.gene063583.t1 | AT5G20620 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.02e-13 | 69.7 |
MS.gene063583.t1 | AT5G20620 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.56e-13 | 67.4 |
MS.gene063583.t1 | AT1G23410 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.07e-13 | 67.4 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.10e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.10e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.10e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.97e-13 | 67.4 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.10e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.10e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.10e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.97e-13 | 67.4 |
MS.gene063583.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.10e-13 | 69.7 |
MS.gene063583.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.10e-13 | 69.7 |
MS.gene063583.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.10e-13 | 69.7 |
MS.gene063583.t1 | AT4G02890 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.97e-13 | 67.4 |
MS.gene063583.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.10e-13 | 69.7 |
MS.gene063583.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.10e-13 | 69.7 |
MS.gene063583.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.10e-13 | 69.7 |
MS.gene063583.t1 | AT4G02890 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.97e-13 | 67.4 |
MS.gene063583.t1 | AT1G31340 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.14e-13 | 67.4 |
MS.gene063583.t1 | AT1G65350 | 45.122 | 82 | 45 | 0 | 164 | 245 | 142 | 223 | 1.37e-13 | 69.7 |
MS.gene063583.t1 | AT1G65350 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.62e-13 | 67.8 |
MS.gene063583.t1 | AT1G65350 | 43.902 | 82 | 45 | 1 | 164 | 245 | 67 | 147 | 3.99e-11 | 62.4 |
MS.gene063583.t1 | AT2G47110 | 50.725 | 69 | 34 | 0 | 174 | 242 | 1 | 69 | 1.44e-13 | 67.0 |
MS.gene063583.t1 | AT2G47110 | 50.725 | 69 | 34 | 0 | 174 | 242 | 1 | 69 | 1.44e-13 | 67.0 |
MS.gene063583.t1 | AT5G20620 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.49e-13 | 70.1 |
MS.gene063583.t1 | AT5G20620 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.49e-13 | 70.1 |
MS.gene063583.t1 | AT5G20620 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.49e-13 | 70.1 |
MS.gene063583.t1 | AT5G20620 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 1.49e-13 | 70.1 |
MS.gene063583.t1 | AT5G20620 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 8.93e-13 | 67.8 |
MS.gene063583.t1 | AT3G62250 | 50.725 | 69 | 34 | 0 | 174 | 242 | 1 | 69 | 1.50e-13 | 67.0 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.59e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.59e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.59e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 1.59e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 9.69e-13 | 67.4 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.59e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.59e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.59e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 1.59e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 9.69e-13 | 67.4 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.59e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.59e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.59e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 1.59e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 9.69e-13 | 67.4 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.86e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.86e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.86e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 1.86e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 1.86e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.09e-12 | 67.8 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.86e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.86e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 1.86e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 1.86e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 1.86e-13 | 69.7 |
MS.gene063583.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.09e-12 | 67.8 |
MS.gene063583.t1 | AT1G66620 | 27.119 | 177 | 120 | 3 | 1 | 169 | 100 | 275 | 3.06e-13 | 68.6 |
MS.gene063583.t1 | AT3G09790 | 46.341 | 82 | 44 | 0 | 164 | 245 | 69 | 150 | 7.45e-13 | 68.2 |
MS.gene063583.t1 | AT3G09790 | 46.341 | 82 | 44 | 0 | 164 | 245 | 69 | 150 | 7.45e-13 | 68.2 |
MS.gene063583.t1 | AT1G53930 | 45.714 | 70 | 38 | 0 | 176 | 245 | 88 | 157 | 7.48e-13 | 65.1 |
MS.gene063583.t1 | AT5G37870 | 29.193 | 161 | 107 | 6 | 1 | 155 | 101 | 260 | 1.01e-11 | 63.9 |
MS.gene063583.t1 | AT1G66650 | 26.816 | 179 | 120 | 6 | 1 | 168 | 142 | 320 | 2.63e-11 | 63.2 |
MS.gene063583.t1 | AT5G37890 | 27.044 | 159 | 112 | 4 | 1 | 155 | 107 | 265 | 5.89e-11 | 61.6 |
MS.gene063583.t1 | AT1G66660 | 29.379 | 177 | 113 | 7 | 3 | 168 | 40 | 215 | 7.79e-11 | 60.8 |
Find 52 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTCTGATTTCTTAACTCTA+AGG | 0.248144 | 5.2:-65233439 | None:intergenic |
GTTCTTCAAGAGGAAAATTA+TGG | 0.263266 | 5.2:+65232897 | MS.gene063583:CDS |
GCAGTCAATATTTGCTGCTT+TGG | 0.307306 | 5.2:+65232963 | MS.gene063583:CDS |
CTAGGCCCTGTACAAAGATT+TGG | 0.337041 | 5.2:-65233400 | None:intergenic |
TACTCGGACTCGGGTGTGTC+TGG | 0.357737 | 5.2:-65232987 | None:intergenic |
GCCGCCCAACGTCTGATCTT+TGG | 0.363598 | 5.2:+65233512 | MS.gene063583:CDS |
CTGCAACCATAGTTCACATT+TGG | 0.381729 | 5.2:-65232669 | None:intergenic |
ATCTTTGTACAGGGCCTAGC+TGG | 0.386582 | 5.2:+65233404 | MS.gene063583:CDS |
GAGTTTCTTGTGATTCCATT+TGG | 0.389324 | 5.2:+65233107 | MS.gene063583:CDS |
AACAAAGTCACAACCTGAAA+AGG | 0.402082 | 5.2:-65232760 | None:intergenic |
ATCAGACGTTGGGCGGCCAC+TGG | 0.402289 | 5.2:-65233506 | None:intergenic |
TATAAATGTTGTAGTCGAAA+AGG | 0.405882 | 5.2:-65233562 | None:intergenic |
GGTTTCATCATTAGACTTCA+AGG | 0.410456 | 5.2:-65232871 | None:intergenic |
CAAATGTTGGATGTACTAAT+CGG | 0.434605 | 5.2:-65233620 | None:intergenic |
CAAATGTGAACTATGGTTGC+AGG | 0.446645 | 5.2:+65232670 | MS.gene063583:CDS |
TCATGTCCAAATGTGAACTA+TGG | 0.450747 | 5.2:+65232663 | MS.gene063583:CDS |
GTCTGATTTCTTAACTCTAA+GGG | 0.469256 | 5.2:-65233438 | None:intergenic |
GCAGATCCAAATCTTTGTAC+AGG | 0.475455 | 5.2:+65233394 | MS.gene063583:intron |
TGTTGTAGTCGAAAAGGGTC+AGG | 0.478699 | 5.2:-65233556 | None:intergenic |
TATTGCAAAGAATGTCCAAC+AGG | 0.484330 | 5.2:+65233061 | MS.gene063583:CDS |
CAATATATCATAACTATACT+CGG | 0.493864 | 5.2:-65233003 | None:intergenic |
ATAAATGTTGTAGTCGAAAA+GGG | 0.494936 | 5.2:-65233561 | None:intergenic |
AAAGGGTCAGGTTTCCATCC+AGG | 0.513561 | 5.2:-65233544 | None:intergenic |
AGAGGTTCAGAAGAACCAAA+TGG | 0.514036 | 5.2:-65233122 | None:intergenic |
GATCTTTGGCAGTAGATACC+TGG | 0.533839 | 5.2:+65233526 | MS.gene063583:CDS |
TGAAACCATTGTTCTTCAAG+AGG | 0.538905 | 5.2:+65232887 | MS.gene063583:CDS |
ACAAAGTCACAACCTGAAAA+GGG | 0.540410 | 5.2:-65232759 | None:intergenic |
ATGCAAATTTCTAGCTTGAG+AGG | 0.547282 | 5.2:-65233140 | None:intergenic |
AGGGACAGTAACATGGCTTA+CGG | 0.547857 | 5.2:-65232740 | None:intergenic |
ACTGCCAAAGATCAGACGTT+GGG | 0.548550 | 5.2:-65233516 | None:intergenic |
AAATAAGTTACACTAGAAAG+AGG | 0.554335 | 5.2:+65232697 | MS.gene063583:CDS |
TCAGACGTTGGGCGGCCACT+GGG | 0.557324 | 5.2:-65233505 | None:intergenic |
GAATCATTCCTCTCACTCTA+CGG | 0.561502 | 5.2:+65233587 | MS.gene063583:CDS |
GGTGGACAATTGTCAAATGT+TGG | 0.563243 | 5.2:-65233633 | None:intergenic |
GATTTGCTAAAGTAACCTGT+TGG | 0.564767 | 5.2:-65233076 | None:intergenic |
ATCATAACTATACTCGGACT+CGG | 0.565356 | 5.2:-65232997 | None:intergenic |
TGCATTTCAGCGATAAACAC+GGG | 0.578429 | 5.2:+65232805 | MS.gene063583:CDS |
TCATAACTATACTCGGACTC+GGG | 0.578996 | 5.2:-65232996 | None:intergenic |
GGGTCATATACTTTCCAGCT+AGG | 0.579585 | 5.2:-65233418 | None:intergenic |
CCTGAAAAGGGACAGTAACA+TGG | 0.591203 | 5.2:-65232747 | None:intergenic |
ATCGTCTTCCGTAGAGTGAG+AGG | 0.594396 | 5.2:-65233595 | None:intergenic |
AGACTTCAAGGAGACAATGA+AGG | 0.595801 | 5.2:-65232859 | None:intergenic |
GCCAAAGATCAGACGTTGGG+CGG | 0.601874 | 5.2:-65233513 | None:intergenic |
CAGATCCAAATCTTTGTACA+GGG | 0.609183 | 5.2:+65233395 | MS.gene063583:intron |
GTGCATTTCAGCGATAAACA+CGG | 0.612101 | 5.2:+65232804 | MS.gene063583:CDS |
AAATGTGAACTATGGTTGCA+GGG | 0.614511 | 5.2:+65232671 | MS.gene063583:CDS |
TTGCATTCACGTAACCTCCA+CGG | 0.623413 | 5.2:+65233157 | MS.gene063583:CDS |
TACTGCCAAAGATCAGACGT+TGG | 0.646446 | 5.2:-65233517 | None:intergenic |
TTTGGCAGTAGATACCTGGA+TGG | 0.649571 | 5.2:+65233530 | MS.gene063583:CDS |
GCATTTCAGCGATAAACACG+GGG | 0.695447 | 5.2:+65232806 | MS.gene063583:CDS |
GGATATAGGAAATACCGTGG+AGG | 0.730393 | 5.2:-65233171 | None:intergenic |
TGACAAGACTAAGATCCCAG+TGG | 0.772185 | 5.2:+65233490 | MS.gene063583:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAATAATACTACTCTTTT+AGG | + | chr5.2:65232936-65232955 | MS.gene063583:CDS | 15.0% |
!!! | ACTTTCTTTTATTGATTTAA+TGG | + | chr5.2:65233361-65233380 | MS.gene063583:intron | 15.0% |
!!! | ATCAAATCAAATTTTCTTAT+GGG | + | chr5.2:65232832-65232851 | MS.gene063583:CDS | 15.0% |
!!! | TATCAAATCAAATTTTCTTA+TGG | + | chr5.2:65232831-65232850 | MS.gene063583:CDS | 15.0% |
!! | CAATATATCATAACTATACT+CGG | - | chr5.2:65233006-65233025 | None:intergenic | 20.0% |
!! | TAAAATACCAAGATTTCAAT+AGG | - | chr5.2:65233219-65233238 | None:intergenic | 20.0% |
! | AAATAAGTTACACTAGAAAG+AGG | + | chr5.2:65232697-65232716 | MS.gene063583:CDS | 25.0% |
! | ATAAATGTTGTAGTCGAAAA+GGG | - | chr5.2:65233564-65233583 | None:intergenic | 25.0% |
! | GCAAATTATCTCAAATTCAT+CGG | + | chr5.2:65233264-65233283 | MS.gene063583:intron | 25.0% |
! | TATAAATGTTGTAGTCGAAA+AGG | - | chr5.2:65233565-65233584 | None:intergenic | 25.0% |
!! | CTATTTTCCTATTGAAATCT+TGG | + | chr5.2:65233209-65233228 | MS.gene063583:intron | 25.0% |
!!! | AAACACAAACAACCTTTTTT+TGG | - | chr5.2:65233301-65233320 | None:intergenic | 25.0% |
!!! | TATTGATTTAATGGCAATTG+TGG | + | chr5.2:65233370-65233389 | MS.gene063583:intron | 25.0% |
AAATAGCCAAAGCAAAGAAT+AGG | - | chr5.2:65233195-65233214 | None:intergenic | 30.0% | |
CAAAGCAAAGAATAGGATAT+AGG | - | chr5.2:65233188-65233207 | None:intergenic | 30.0% | |
CAAATGTTGGATGTACTAAT+CGG | - | chr5.2:65233623-65233642 | None:intergenic | 30.0% | |
CTATATCCTATTCTTTGCTT+TGG | + | chr5.2:65233186-65233205 | MS.gene063583:intron | 30.0% | |
GTCTGATTTCTTAACTCTAA+GGG | - | chr5.2:65233441-65233460 | None:intergenic | 30.0% | |
GTTCTTCAAGAGGAAAATTA+TGG | + | chr5.2:65232897-65232916 | MS.gene063583:CDS | 30.0% | |
TGTCTGATTTCTTAACTCTA+AGG | - | chr5.2:65233442-65233461 | None:intergenic | 30.0% | |
! | ATTTTCCTCTTGAAGAACAA+TGG | - | chr5.2:65232895-65232914 | None:intergenic | 30.0% |
!! | GTTTTTCAAACGCCAAAAAA+AGG | + | chr5.2:65233286-65233305 | MS.gene063583:intron | 30.0% |
AAATGTGAACTATGGTTGCA+GGG | + | chr5.2:65232671-65232690 | MS.gene063583:CDS | 35.0% | |
AACAAAGTCACAACCTGAAA+AGG | - | chr5.2:65232763-65232782 | None:intergenic | 35.0% | |
ACAAAGTCACAACCTGAAAA+GGG | - | chr5.2:65232762-65232781 | None:intergenic | 35.0% | |
ATAGGATATAGGAAATACCG+TGG | - | chr5.2:65233177-65233196 | None:intergenic | 35.0% | |
ATCATAACTATACTCGGACT+CGG | - | chr5.2:65233000-65233019 | None:intergenic | 35.0% | |
CAGATCCAAATCTTTGTACA+GGG | + | chr5.2:65233395-65233414 | MS.gene063583:intron | 35.0% | |
GAGTTTCTTGTGATTCCATT+TGG | + | chr5.2:65233107-65233126 | MS.gene063583:CDS | 35.0% | |
GGTTTCATCATTAGACTTCA+AGG | - | chr5.2:65232874-65232893 | None:intergenic | 35.0% | |
TATTGCAAAGAATGTCCAAC+AGG | + | chr5.2:65233061-65233080 | MS.gene063583:CDS | 35.0% | |
TCATGTCCAAATGTGAACTA+TGG | + | chr5.2:65232663-65232682 | MS.gene063583:CDS | 35.0% | |
TGAAACCATTGTTCTTCAAG+AGG | + | chr5.2:65232887-65232906 | MS.gene063583:CDS | 35.0% | |
!! | ATGCAAATTTCTAGCTTGAG+AGG | - | chr5.2:65233143-65233162 | None:intergenic | 35.0% |
!! | GATTTGCTAAAGTAACCTGT+TGG | - | chr5.2:65233079-65233098 | None:intergenic | 35.0% |
AGACTTCAAGGAGACAATGA+AGG | - | chr5.2:65232862-65232881 | None:intergenic | 40.0% | |
AGAGGTTCAGAAGAACCAAA+TGG | - | chr5.2:65233125-65233144 | None:intergenic | 40.0% | |
CAAATGTGAACTATGGTTGC+AGG | + | chr5.2:65232670-65232689 | MS.gene063583:CDS | 40.0% | |
CTGCAACCATAGTTCACATT+TGG | - | chr5.2:65232672-65232691 | None:intergenic | 40.0% | |
GAATCATTCCTCTCACTCTA+CGG | + | chr5.2:65233587-65233606 | MS.gene063583:CDS | 40.0% | |
GCAGATCCAAATCTTTGTAC+AGG | + | chr5.2:65233394-65233413 | MS.gene063583:intron | 40.0% | |
GTGCATTTCAGCGATAAACA+CGG | + | chr5.2:65232804-65232823 | MS.gene063583:CDS | 40.0% | |
TCATAACTATACTCGGACTC+GGG | - | chr5.2:65232999-65233018 | None:intergenic | 40.0% | |
TGCATTTCAGCGATAAACAC+GGG | + | chr5.2:65232805-65232824 | MS.gene063583:CDS | 40.0% | |
! | GCAGTCAATATTTGCTGCTT+TGG | + | chr5.2:65232963-65232982 | MS.gene063583:CDS | 40.0% |
ACTGCCAAAGATCAGACGTT+GGG | - | chr5.2:65233519-65233538 | None:intergenic | 45.0% | |
AGGGACAGTAACATGGCTTA+CGG | - | chr5.2:65232743-65232762 | None:intergenic | 45.0% | |
CCTGAAAAGGGACAGTAACA+TGG | - | chr5.2:65232750-65232769 | None:intergenic | 45.0% | |
CTAGGCCCTGTACAAAGATT+TGG | - | chr5.2:65233403-65233422 | None:intergenic | 45.0% | |
GATCTTTGGCAGTAGATACC+TGG | + | chr5.2:65233526-65233545 | MS.gene063583:CDS | 45.0% | |
GCATTTCAGCGATAAACACG+GGG | + | chr5.2:65232806-65232825 | MS.gene063583:CDS | 45.0% | |
GGATATAGGAAATACCGTGG+AGG | - | chr5.2:65233174-65233193 | None:intergenic | 45.0% | |
GGGTCATATACTTTCCAGCT+AGG | - | chr5.2:65233421-65233440 | None:intergenic | 45.0% | |
TACTGCCAAAGATCAGACGT+TGG | - | chr5.2:65233520-65233539 | None:intergenic | 45.0% | |
TGACAAGACTAAGATCCCAG+TGG | + | chr5.2:65233490-65233509 | MS.gene063583:CDS | 45.0% | |
TGTTGTAGTCGAAAAGGGTC+AGG | - | chr5.2:65233559-65233578 | None:intergenic | 45.0% | |
TTGCATTCACGTAACCTCCA+CGG | + | chr5.2:65233157-65233176 | MS.gene063583:CDS | 45.0% | |
TTTGGCAGTAGATACCTGGA+TGG | + | chr5.2:65233530-65233549 | MS.gene063583:CDS | 45.0% | |
! | CCATGTTACTGTCCCTTTTC+AGG | + | chr5.2:65232747-65232766 | MS.gene063583:CDS | 45.0% |
AAAGGGTCAGGTTTCCATCC+AGG | - | chr5.2:65233547-65233566 | None:intergenic | 50.0% | |
ATCGTCTTCCGTAGAGTGAG+AGG | - | chr5.2:65233598-65233617 | None:intergenic | 50.0% | |
ATCTTTGTACAGGGCCTAGC+TGG | + | chr5.2:65233404-65233423 | MS.gene063583:CDS | 50.0% | |
GCCAAAGATCAGACGTTGGG+CGG | - | chr5.2:65233516-65233535 | None:intergenic | 55.0% | |
GCCGCCCAACGTCTGATCTT+TGG | + | chr5.2:65233512-65233531 | MS.gene063583:CDS | 60.0% | |
TACTCGGACTCGGGTGTGTC+TGG | - | chr5.2:65232990-65233009 | None:intergenic | 60.0% | |
ATCAGACGTTGGGCGGCCAC+TGG | - | chr5.2:65233509-65233528 | None:intergenic | 65.0% | |
TCAGACGTTGGGCGGCCACT+GGG | - | chr5.2:65233508-65233527 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 65232660 | 65233643 | 65232660 | ID=MS.gene063583 |
chr5.2 | mRNA | 65232660 | 65233643 | 65232660 | ID=MS.gene063583.t1;Parent=MS.gene063583 |
chr5.2 | exon | 65232660 | 65233178 | 65232660 | ID=MS.gene063583.t1.exon1;Parent=MS.gene063583.t1 |
chr5.2 | CDS | 65232660 | 65233178 | 65232660 | ID=cds.MS.gene063583.t1;Parent=MS.gene063583.t1 |
chr5.2 | exon | 65233398 | 65233643 | 65233398 | ID=MS.gene063583.t1.exon2;Parent=MS.gene063583.t1 |
chr5.2 | CDS | 65233398 | 65233643 | 65233398 | ID=cds.MS.gene063583.t1;Parent=MS.gene063583.t1 |
Gene Sequence |
Protein sequence |