AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063583


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063583.t1 MTR_5g076720 68.548 248 77 1 1 247 141 388 1.82e-116 339
MS.gene063583.t1 MTR_5g076810 65.447 246 82 2 1 245 23 266 2.35e-109 316
MS.gene063583.t1 MTR_5g067400 64.082 245 86 1 1 245 70 312 1.58e-105 308
MS.gene063583.t1 MTR_1g046650 63.563 247 87 2 1 247 1 244 6.24e-104 301
MS.gene063583.t1 MTR_1g046650 63.563 247 87 2 1 247 70 313 8.38e-103 301
MS.gene063583.t1 MTR_7g024290 64.634 246 84 2 1 245 70 313 1.07e-102 301
MS.gene063583.t1 MTR_1g046650 63.563 247 87 2 1 247 70 313 1.10e-102 301
MS.gene063583.t1 MTR_1g046650 63.563 247 87 2 1 247 101 344 5.32e-102 300
MS.gene063583.t1 MTR_1g046640 62.449 245 89 2 1 245 70 311 1.44e-99 293
MS.gene063583.t1 MTR_2g038420 62.000 250 92 2 1 247 84 333 5.19e-99 292
MS.gene063583.t1 MTR_5g076520 61.633 245 92 2 1 243 70 314 3.84e-98 290
MS.gene063583.t1 MTR_5g076505 58.943 246 100 1 1 245 66 311 2.45e-95 282
MS.gene063583.t1 MTR_7g094390 59.592 245 97 1 1 245 231 473 4.43e-95 287
MS.gene063583.t1 MTR_2g038430 58.140 258 97 2 1 247 84 341 7.86e-95 282
MS.gene063583.t1 MTR_5g061290 56.800 250 105 1 1 247 76 325 8.67e-94 279
MS.gene063583.t1 MTR_5g076660 57.661 248 100 2 1 245 92 337 1.02e-89 269
MS.gene063583.t1 MTR_5g076370 55.777 251 105 3 1 248 93 340 3.71e-86 260
MS.gene063583.t1 MTR_5g076820 62.745 204 72 3 1 201 77 279 1.24e-80 244
MS.gene063583.t1 MTR_5g076540 70.440 159 47 0 1 159 70 228 3.53e-75 229
MS.gene063583.t1 MTR_5g077020 68.675 166 46 3 5 168 45 206 5.85e-69 212
MS.gene063583.t1 MTR_4g058025 70.435 115 33 1 12 125 14 128 3.74e-48 157
MS.gene063583.t1 MTR_4g094468 40.237 169 96 3 1 166 156 322 2.37e-33 123
MS.gene063583.t1 MTR_7g105080 50.000 72 36 0 174 245 1 72 3.80e-14 67.8
MS.gene063583.t1 MTR_3g092130 50.000 72 36 0 174 245 1 72 3.80e-14 67.8
MS.gene063583.t1 MTR_1g059690 50.000 72 36 0 174 245 1 72 3.80e-14 67.8
MS.gene063583.t1 MTR_3g092130 50.000 72 36 0 174 245 1 72 3.84e-14 68.2
MS.gene063583.t1 MTR_4g088485 45.122 82 45 0 164 245 128 209 4.31e-14 69.7
MS.gene063583.t1 MTR_4g088485 50.000 72 36 0 174 245 1 72 3.32e-13 67.0
MS.gene063583.t1 MTR_7g116360 45.122 82 45 0 164 245 67 148 4.47e-14 69.7
MS.gene063583.t1 MTR_7g116360 45.122 82 45 0 164 245 143 224 4.47e-14 69.7
MS.gene063583.t1 MTR_7g116360 50.000 72 36 0 174 245 1 72 3.03e-13 67.4
MS.gene063583.t1 MTR_1g066390 45.122 82 45 0 164 245 67 148 4.50e-14 69.7
MS.gene063583.t1 MTR_1g066390 45.122 82 45 0 164 245 143 224 4.50e-14 69.7
MS.gene063583.t1 MTR_1g066390 50.000 72 36 0 174 245 1 72 3.13e-13 67.4
MS.gene063583.t1 MTR_5g092700 50.000 72 36 0 174 245 1 72 6.47e-14 67.8
MS.gene063583.t1 MTR_4g073580 50.000 72 36 0 174 245 1 72 6.47e-14 67.8
MS.gene063583.t1 MTR_4g080920 45.122 82 45 0 164 245 67 148 7.57e-14 69.3
MS.gene063583.t1 MTR_4g080920 48.611 72 37 0 174 245 1 72 2.21e-12 65.1
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 67 148 9.54e-14 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 143 224 9.54e-14 69.7
MS.gene063583.t1 MTR_8g018230 50.000 72 36 0 174 245 1 72 6.20e-13 67.4
MS.gene063583.t1 MTR_4g081010 45.122 82 45 0 164 245 67 148 9.76e-14 69.7
MS.gene063583.t1 MTR_4g081010 45.122 82 45 0 164 245 143 224 9.76e-14 69.7
MS.gene063583.t1 MTR_4g081010 50.000 72 36 0 174 245 1 72 5.95e-13 67.4
MS.gene063583.t1 MTR_6g061930 45.122 82 45 0 164 245 67 148 1.08e-13 69.7
MS.gene063583.t1 MTR_6g061930 45.122 82 45 0 164 245 204 285 1.08e-13 69.7
MS.gene063583.t1 MTR_6g061930 50.000 72 36 0 174 245 1 72 7.86e-13 67.0
MS.gene063583.t1 MTR_4g081010 45.122 82 45 0 164 245 67 148 1.09e-13 69.7
MS.gene063583.t1 MTR_4g081010 45.122 82 45 0 164 245 143 224 1.09e-13 69.7
MS.gene063583.t1 MTR_4g081010 45.122 82 45 0 164 245 219 300 1.09e-13 69.7
MS.gene063583.t1 MTR_4g081010 50.000 72 36 0 174 245 1 72 6.91e-13 67.4
MS.gene063583.t1 MTR_7g116360 45.122 82 45 0 164 245 115 196 1.10e-13 69.3
MS.gene063583.t1 MTR_7g116360 45.122 82 45 0 164 245 191 272 1.10e-13 69.3
MS.gene063583.t1 MTR_7g116360 42.000 100 56 1 146 245 23 120 5.40e-13 67.4
MS.gene063583.t1 MTR_4g073580 50.000 72 36 0 174 245 1 72 1.38e-13 67.4
MS.gene063583.t1 MTR_8g081020 45.122 82 45 0 164 245 67 148 1.38e-13 70.1
MS.gene063583.t1 MTR_8g081020 45.122 82 45 0 164 245 143 224 1.38e-13 70.1
MS.gene063583.t1 MTR_8g081020 45.122 82 45 0 164 245 219 300 1.38e-13 70.1
MS.gene063583.t1 MTR_8g081020 45.122 82 45 0 164 245 295 376 1.38e-13 70.1
MS.gene063583.t1 MTR_8g081020 50.000 72 36 0 174 245 1 72 8.26e-13 67.8
MS.gene063583.t1 MTR_4g091580 45.122 82 45 0 164 245 67 148 1.46e-13 69.7
MS.gene063583.t1 MTR_4g091580 45.122 82 45 0 164 245 143 224 1.46e-13 69.7
MS.gene063583.t1 MTR_4g091580 45.122 82 45 0 164 245 295 376 1.46e-13 69.7
MS.gene063583.t1 MTR_4g091580 45.122 82 45 0 164 245 219 300 1.94e-13 69.7
MS.gene063583.t1 MTR_4g091580 50.000 72 36 0 174 245 1 72 8.82e-13 67.8
MS.gene063583.t1 MTR_8g088060 50.000 72 36 0 174 245 1 72 1.46e-13 67.0
MS.gene063583.t1 MTR_4g080797 45.122 82 45 0 164 245 67 148 1.52e-13 69.7
MS.gene063583.t1 MTR_4g080797 45.122 82 45 0 164 245 143 224 1.52e-13 69.7
MS.gene063583.t1 MTR_4g080797 45.122 82 45 0 164 245 219 300 1.52e-13 69.7
MS.gene063583.t1 MTR_4g080797 45.122 82 45 0 164 245 295 376 1.52e-13 69.7
MS.gene063583.t1 MTR_4g080797 50.000 72 36 0 174 245 1 72 9.25e-13 67.4
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 67 148 1.52e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 143 224 1.52e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 219 300 1.52e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 295 376 1.52e-13 69.7
MS.gene063583.t1 MTR_8g018230 50.000 72 36 0 174 245 1 72 9.25e-13 67.4
MS.gene063583.t1 MTR_4g081010 45.122 82 45 0 164 245 67 148 1.56e-13 69.7
MS.gene063583.t1 MTR_4g081010 45.122 82 45 0 164 245 143 224 1.56e-13 69.7
MS.gene063583.t1 MTR_4g081010 45.122 82 45 0 164 245 219 300 1.56e-13 69.7
MS.gene063583.t1 MTR_4g081010 45.122 82 45 0 164 245 295 376 1.56e-13 69.7
MS.gene063583.t1 MTR_4g081010 50.000 72 36 0 174 245 1 72 9.43e-13 67.4
MS.gene063583.t1 MTR_5g033960 50.000 72 36 0 174 245 1 72 1.65e-13 66.6
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 67 148 1.78e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 143 224 1.78e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 219 300 1.78e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 295 376 1.78e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 371 452 1.78e-13 69.7
MS.gene063583.t1 MTR_8g018230 50.000 72 36 0 174 245 1 72 1.04e-12 67.8
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 67 148 1.78e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 143 224 1.78e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 219 300 1.78e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 295 376 1.78e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 371 452 1.78e-13 69.7
MS.gene063583.t1 MTR_8g018230 50.000 72 36 0 174 245 1 72 1.04e-12 67.8
MS.gene063583.t1 MTR_4g091580 45.122 82 45 0 164 245 67 148 1.90e-13 69.7
MS.gene063583.t1 MTR_4g091580 45.122 82 45 0 164 245 143 224 1.90e-13 69.7
MS.gene063583.t1 MTR_4g091580 45.122 82 45 0 164 245 219 300 1.90e-13 69.7
MS.gene063583.t1 MTR_4g091580 45.122 82 45 0 164 245 371 452 1.90e-13 69.7
MS.gene063583.t1 MTR_4g091580 45.122 82 45 0 164 245 447 528 1.90e-13 69.7
MS.gene063583.t1 MTR_4g091580 45.122 82 45 0 164 245 295 376 8.16e-13 68.2
MS.gene063583.t1 MTR_4g091580 50.000 72 36 0 174 245 1 72 1.11e-12 67.8
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 67 148 1.99e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 143 224 1.99e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 219 300 1.99e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 295 376 1.99e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 371 452 1.99e-13 69.7
MS.gene063583.t1 MTR_8g018230 45.122 82 45 0 164 245 447 528 1.99e-13 69.7
MS.gene063583.t1 MTR_8g018230 50.000 72 36 0 174 245 1 72 1.16e-12 67.4
MS.gene063583.t1 MTR_4g081010 45.122 82 45 0 164 245 67 148 2.05e-13 69.7
MS.gene063583.t1 MTR_4g081010 45.122 82 45 0 164 245 143 224 2.05e-13 69.7
MS.gene063583.t1 MTR_4g081010 45.122 82 45 0 164 245 219 300 2.05e-13 69.7
MS.gene063583.t1 MTR_4g081010 45.122 82 45 0 164 245 295 376 2.05e-13 69.7
MS.gene063583.t1 MTR_4g081010 45.122 82 45 0 164 245 371 452 2.05e-13 69.7
MS.gene063583.t1 MTR_4g081010 45.122 82 45 0 164 245 447 528 2.05e-13 69.7
MS.gene063583.t1 MTR_4g081010 50.000 72 36 0 174 245 1 72 1.20e-12 67.4
MS.gene063583.t1 MTR_4g088495 45.122 82 45 0 164 245 67 148 3.10e-13 69.3
MS.gene063583.t1 MTR_4g088495 45.122 82 45 0 164 245 143 224 3.10e-13 69.3
MS.gene063583.t1 MTR_4g088495 45.122 82 45 0 164 245 219 300 3.10e-13 69.3
MS.gene063583.t1 MTR_4g088495 45.122 82 45 0 164 245 295 376 3.10e-13 69.3
MS.gene063583.t1 MTR_4g088495 45.122 82 45 0 164 245 371 452 3.10e-13 69.3
MS.gene063583.t1 MTR_4g088495 45.122 82 45 0 164 245 447 528 3.10e-13 69.3
MS.gene063583.t1 MTR_4g088495 45.122 82 45 0 164 245 523 604 3.10e-13 69.3
MS.gene063583.t1 MTR_4g088495 45.122 82 45 0 164 245 599 680 3.10e-13 69.3
MS.gene063583.t1 MTR_4g088495 45.122 82 45 0 164 245 675 756 3.10e-13 69.3
MS.gene063583.t1 MTR_4g088495 45.122 82 45 0 164 245 751 832 3.10e-13 69.3
MS.gene063583.t1 MTR_4g088495 50.000 72 36 0 174 245 1 72 9.68e-13 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063583.t1 AT5G37930 31.395 172 114 2 1 168 169 340 3.21e-19 85.9
MS.gene063583.t1 AT4G05050 45.122 82 45 0 164 245 67 148 1.19e-14 69.7
MS.gene063583.t1 AT4G05050 50.000 72 36 0 174 245 1 72 8.83e-14 67.4
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 67 148 1.19e-14 69.7
MS.gene063583.t1 AT4G05320 50.000 72 36 0 174 245 1 72 8.83e-14 67.4
MS.gene063583.t1 AT5G37640 45.122 82 45 0 164 245 69 150 4.64e-14 70.9
MS.gene063583.t1 AT5G37640 45.783 83 44 1 164 245 221 303 1.12e-11 64.3
MS.gene063583.t1 AT5G37640 42.683 82 47 0 164 245 145 226 2.85e-11 62.8
MS.gene063583.t1 AT3G52590 50.000 72 36 0 174 245 1 72 4.65e-14 67.4
MS.gene063583.t1 AT2G36170 50.000 72 36 0 174 245 1 72 4.65e-14 67.4
MS.gene063583.t1 AT4G05050 45.122 82 45 0 164 245 67 148 4.68e-14 69.7
MS.gene063583.t1 AT4G05050 45.122 82 45 0 164 245 143 224 4.68e-14 69.7
MS.gene063583.t1 AT4G05050 50.000 72 36 0 174 245 1 72 3.17e-13 67.4
MS.gene063583.t1 AT4G05050 45.122 82 45 0 164 245 67 148 4.68e-14 69.7
MS.gene063583.t1 AT4G05050 45.122 82 45 0 164 245 143 224 4.68e-14 69.7
MS.gene063583.t1 AT4G05050 50.000 72 36 0 174 245 1 72 3.17e-13 67.4
MS.gene063583.t1 AT4G05050 45.122 82 45 0 164 245 67 148 4.68e-14 69.7
MS.gene063583.t1 AT4G05050 45.122 82 45 0 164 245 143 224 4.68e-14 69.7
MS.gene063583.t1 AT4G05050 50.000 72 36 0 174 245 1 72 3.17e-13 67.4
MS.gene063583.t1 AT4G02890 45.122 82 45 0 164 245 67 148 4.68e-14 69.7
MS.gene063583.t1 AT4G02890 45.122 82 45 0 164 245 143 224 4.68e-14 69.7
MS.gene063583.t1 AT4G02890 50.000 72 36 0 174 245 1 72 3.17e-13 67.4
MS.gene063583.t1 AT4G02890 45.122 82 45 0 164 245 67 148 4.68e-14 69.7
MS.gene063583.t1 AT4G02890 45.122 82 45 0 164 245 143 224 4.68e-14 69.7
MS.gene063583.t1 AT4G02890 50.000 72 36 0 174 245 1 72 3.17e-13 67.4
MS.gene063583.t1 AT1G55060 46.341 82 44 0 164 245 67 148 4.94e-14 69.7
MS.gene063583.t1 AT1G55060 42.683 82 47 0 164 245 143 224 1.05e-11 63.2
MS.gene063583.t1 AT2G35635 50.000 72 36 0 174 245 1 72 9.21e-14 67.4
MS.gene063583.t1 AT5G03240 45.122 82 45 0 164 245 67 148 1.02e-13 69.7
MS.gene063583.t1 AT5G03240 45.122 82 45 0 164 245 143 224 1.02e-13 69.7
MS.gene063583.t1 AT5G03240 45.122 82 45 0 164 245 219 300 1.02e-13 69.7
MS.gene063583.t1 AT5G03240 50.000 72 36 0 174 245 1 72 6.56e-13 67.4
MS.gene063583.t1 AT5G03240 45.122 82 45 0 164 245 67 148 1.02e-13 69.7
MS.gene063583.t1 AT5G03240 45.122 82 45 0 164 245 143 224 1.02e-13 69.7
MS.gene063583.t1 AT5G03240 45.122 82 45 0 164 245 219 300 1.02e-13 69.7
MS.gene063583.t1 AT5G03240 50.000 72 36 0 174 245 1 72 6.56e-13 67.4
MS.gene063583.t1 AT5G03240 45.122 82 45 0 164 245 67 148 1.02e-13 69.7
MS.gene063583.t1 AT5G03240 45.122 82 45 0 164 245 143 224 1.02e-13 69.7
MS.gene063583.t1 AT5G03240 45.122 82 45 0 164 245 219 300 1.02e-13 69.7
MS.gene063583.t1 AT5G03240 50.000 72 36 0 174 245 1 72 6.56e-13 67.4
MS.gene063583.t1 AT5G20620 45.122 82 45 0 164 245 67 148 1.02e-13 69.7
MS.gene063583.t1 AT5G20620 45.122 82 45 0 164 245 143 224 1.02e-13 69.7
MS.gene063583.t1 AT5G20620 45.122 82 45 0 164 245 219 300 1.02e-13 69.7
MS.gene063583.t1 AT5G20620 50.000 72 36 0 174 245 1 72 6.56e-13 67.4
MS.gene063583.t1 AT1G23410 50.000 72 36 0 174 245 1 72 1.07e-13 67.4
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 67 148 1.10e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 143 224 1.10e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 219 300 1.10e-13 69.7
MS.gene063583.t1 AT4G05320 50.000 72 36 0 174 245 1 72 6.97e-13 67.4
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 67 148 1.10e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 143 224 1.10e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 219 300 1.10e-13 69.7
MS.gene063583.t1 AT4G05320 50.000 72 36 0 174 245 1 72 6.97e-13 67.4
MS.gene063583.t1 AT4G02890 45.122 82 45 0 164 245 67 148 1.10e-13 69.7
MS.gene063583.t1 AT4G02890 45.122 82 45 0 164 245 143 224 1.10e-13 69.7
MS.gene063583.t1 AT4G02890 45.122 82 45 0 164 245 219 300 1.10e-13 69.7
MS.gene063583.t1 AT4G02890 50.000 72 36 0 174 245 1 72 6.97e-13 67.4
MS.gene063583.t1 AT4G02890 45.122 82 45 0 164 245 67 148 1.10e-13 69.7
MS.gene063583.t1 AT4G02890 45.122 82 45 0 164 245 143 224 1.10e-13 69.7
MS.gene063583.t1 AT4G02890 45.122 82 45 0 164 245 219 300 1.10e-13 69.7
MS.gene063583.t1 AT4G02890 50.000 72 36 0 174 245 1 72 6.97e-13 67.4
MS.gene063583.t1 AT1G31340 50.000 72 36 0 174 245 1 72 1.14e-13 67.4
MS.gene063583.t1 AT1G65350 45.122 82 45 0 164 245 142 223 1.37e-13 69.7
MS.gene063583.t1 AT1G65350 50.000 72 36 0 174 245 1 72 6.62e-13 67.8
MS.gene063583.t1 AT1G65350 43.902 82 45 1 164 245 67 147 3.99e-11 62.4
MS.gene063583.t1 AT2G47110 50.725 69 34 0 174 242 1 69 1.44e-13 67.0
MS.gene063583.t1 AT2G47110 50.725 69 34 0 174 242 1 69 1.44e-13 67.0
MS.gene063583.t1 AT5G20620 45.122 82 45 0 164 245 67 148 1.49e-13 70.1
MS.gene063583.t1 AT5G20620 45.122 82 45 0 164 245 143 224 1.49e-13 70.1
MS.gene063583.t1 AT5G20620 45.122 82 45 0 164 245 219 300 1.49e-13 70.1
MS.gene063583.t1 AT5G20620 45.122 82 45 0 164 245 295 376 1.49e-13 70.1
MS.gene063583.t1 AT5G20620 50.000 72 36 0 174 245 1 72 8.93e-13 67.8
MS.gene063583.t1 AT3G62250 50.725 69 34 0 174 242 1 69 1.50e-13 67.0
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 67 148 1.59e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 143 224 1.59e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 219 300 1.59e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 295 376 1.59e-13 69.7
MS.gene063583.t1 AT4G05320 50.000 72 36 0 174 245 1 72 9.69e-13 67.4
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 67 148 1.59e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 143 224 1.59e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 219 300 1.59e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 295 376 1.59e-13 69.7
MS.gene063583.t1 AT4G05320 50.000 72 36 0 174 245 1 72 9.69e-13 67.4
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 67 148 1.59e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 143 224 1.59e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 219 300 1.59e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 295 376 1.59e-13 69.7
MS.gene063583.t1 AT4G05320 50.000 72 36 0 174 245 1 72 9.69e-13 67.4
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 67 148 1.86e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 143 224 1.86e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 219 300 1.86e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 295 376 1.86e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 371 452 1.86e-13 69.7
MS.gene063583.t1 AT4G05320 50.000 72 36 0 174 245 1 72 1.09e-12 67.8
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 67 148 1.86e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 143 224 1.86e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 219 300 1.86e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 295 376 1.86e-13 69.7
MS.gene063583.t1 AT4G05320 45.122 82 45 0 164 245 371 452 1.86e-13 69.7
MS.gene063583.t1 AT4G05320 50.000 72 36 0 174 245 1 72 1.09e-12 67.8
MS.gene063583.t1 AT1G66620 27.119 177 120 3 1 169 100 275 3.06e-13 68.6
MS.gene063583.t1 AT3G09790 46.341 82 44 0 164 245 69 150 7.45e-13 68.2
MS.gene063583.t1 AT3G09790 46.341 82 44 0 164 245 69 150 7.45e-13 68.2
MS.gene063583.t1 AT1G53930 45.714 70 38 0 176 245 88 157 7.48e-13 65.1
MS.gene063583.t1 AT5G37870 29.193 161 107 6 1 155 101 260 1.01e-11 63.9
MS.gene063583.t1 AT1G66650 26.816 179 120 6 1 168 142 320 2.63e-11 63.2
MS.gene063583.t1 AT5G37890 27.044 159 112 4 1 155 107 265 5.89e-11 61.6
MS.gene063583.t1 AT1G66660 29.379 177 113 7 3 168 40 215 7.79e-11 60.8

Find 52 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCTGATTTCTTAACTCTA+AGG 0.248144 5.2:-65233439 None:intergenic
GTTCTTCAAGAGGAAAATTA+TGG 0.263266 5.2:+65232897 MS.gene063583:CDS
GCAGTCAATATTTGCTGCTT+TGG 0.307306 5.2:+65232963 MS.gene063583:CDS
CTAGGCCCTGTACAAAGATT+TGG 0.337041 5.2:-65233400 None:intergenic
TACTCGGACTCGGGTGTGTC+TGG 0.357737 5.2:-65232987 None:intergenic
GCCGCCCAACGTCTGATCTT+TGG 0.363598 5.2:+65233512 MS.gene063583:CDS
CTGCAACCATAGTTCACATT+TGG 0.381729 5.2:-65232669 None:intergenic
ATCTTTGTACAGGGCCTAGC+TGG 0.386582 5.2:+65233404 MS.gene063583:CDS
GAGTTTCTTGTGATTCCATT+TGG 0.389324 5.2:+65233107 MS.gene063583:CDS
AACAAAGTCACAACCTGAAA+AGG 0.402082 5.2:-65232760 None:intergenic
ATCAGACGTTGGGCGGCCAC+TGG 0.402289 5.2:-65233506 None:intergenic
TATAAATGTTGTAGTCGAAA+AGG 0.405882 5.2:-65233562 None:intergenic
GGTTTCATCATTAGACTTCA+AGG 0.410456 5.2:-65232871 None:intergenic
CAAATGTTGGATGTACTAAT+CGG 0.434605 5.2:-65233620 None:intergenic
CAAATGTGAACTATGGTTGC+AGG 0.446645 5.2:+65232670 MS.gene063583:CDS
TCATGTCCAAATGTGAACTA+TGG 0.450747 5.2:+65232663 MS.gene063583:CDS
GTCTGATTTCTTAACTCTAA+GGG 0.469256 5.2:-65233438 None:intergenic
GCAGATCCAAATCTTTGTAC+AGG 0.475455 5.2:+65233394 MS.gene063583:intron
TGTTGTAGTCGAAAAGGGTC+AGG 0.478699 5.2:-65233556 None:intergenic
TATTGCAAAGAATGTCCAAC+AGG 0.484330 5.2:+65233061 MS.gene063583:CDS
CAATATATCATAACTATACT+CGG 0.493864 5.2:-65233003 None:intergenic
ATAAATGTTGTAGTCGAAAA+GGG 0.494936 5.2:-65233561 None:intergenic
AAAGGGTCAGGTTTCCATCC+AGG 0.513561 5.2:-65233544 None:intergenic
AGAGGTTCAGAAGAACCAAA+TGG 0.514036 5.2:-65233122 None:intergenic
GATCTTTGGCAGTAGATACC+TGG 0.533839 5.2:+65233526 MS.gene063583:CDS
TGAAACCATTGTTCTTCAAG+AGG 0.538905 5.2:+65232887 MS.gene063583:CDS
ACAAAGTCACAACCTGAAAA+GGG 0.540410 5.2:-65232759 None:intergenic
ATGCAAATTTCTAGCTTGAG+AGG 0.547282 5.2:-65233140 None:intergenic
AGGGACAGTAACATGGCTTA+CGG 0.547857 5.2:-65232740 None:intergenic
ACTGCCAAAGATCAGACGTT+GGG 0.548550 5.2:-65233516 None:intergenic
AAATAAGTTACACTAGAAAG+AGG 0.554335 5.2:+65232697 MS.gene063583:CDS
TCAGACGTTGGGCGGCCACT+GGG 0.557324 5.2:-65233505 None:intergenic
GAATCATTCCTCTCACTCTA+CGG 0.561502 5.2:+65233587 MS.gene063583:CDS
GGTGGACAATTGTCAAATGT+TGG 0.563243 5.2:-65233633 None:intergenic
GATTTGCTAAAGTAACCTGT+TGG 0.564767 5.2:-65233076 None:intergenic
ATCATAACTATACTCGGACT+CGG 0.565356 5.2:-65232997 None:intergenic
TGCATTTCAGCGATAAACAC+GGG 0.578429 5.2:+65232805 MS.gene063583:CDS
TCATAACTATACTCGGACTC+GGG 0.578996 5.2:-65232996 None:intergenic
GGGTCATATACTTTCCAGCT+AGG 0.579585 5.2:-65233418 None:intergenic
CCTGAAAAGGGACAGTAACA+TGG 0.591203 5.2:-65232747 None:intergenic
ATCGTCTTCCGTAGAGTGAG+AGG 0.594396 5.2:-65233595 None:intergenic
AGACTTCAAGGAGACAATGA+AGG 0.595801 5.2:-65232859 None:intergenic
GCCAAAGATCAGACGTTGGG+CGG 0.601874 5.2:-65233513 None:intergenic
CAGATCCAAATCTTTGTACA+GGG 0.609183 5.2:+65233395 MS.gene063583:intron
GTGCATTTCAGCGATAAACA+CGG 0.612101 5.2:+65232804 MS.gene063583:CDS
AAATGTGAACTATGGTTGCA+GGG 0.614511 5.2:+65232671 MS.gene063583:CDS
TTGCATTCACGTAACCTCCA+CGG 0.623413 5.2:+65233157 MS.gene063583:CDS
TACTGCCAAAGATCAGACGT+TGG 0.646446 5.2:-65233517 None:intergenic
TTTGGCAGTAGATACCTGGA+TGG 0.649571 5.2:+65233530 MS.gene063583:CDS
GCATTTCAGCGATAAACACG+GGG 0.695447 5.2:+65232806 MS.gene063583:CDS
GGATATAGGAAATACCGTGG+AGG 0.730393 5.2:-65233171 None:intergenic
TGACAAGACTAAGATCCCAG+TGG 0.772185 5.2:+65233490 MS.gene063583:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATAATACTACTCTTTT+AGG + chr5.2:65232936-65232955 MS.gene063583:CDS 15.0%
!!! ACTTTCTTTTATTGATTTAA+TGG + chr5.2:65233361-65233380 MS.gene063583:intron 15.0%
!!! ATCAAATCAAATTTTCTTAT+GGG + chr5.2:65232832-65232851 MS.gene063583:CDS 15.0%
!!! TATCAAATCAAATTTTCTTA+TGG + chr5.2:65232831-65232850 MS.gene063583:CDS 15.0%
!! CAATATATCATAACTATACT+CGG - chr5.2:65233006-65233025 None:intergenic 20.0%
!! TAAAATACCAAGATTTCAAT+AGG - chr5.2:65233219-65233238 None:intergenic 20.0%
! AAATAAGTTACACTAGAAAG+AGG + chr5.2:65232697-65232716 MS.gene063583:CDS 25.0%
! ATAAATGTTGTAGTCGAAAA+GGG - chr5.2:65233564-65233583 None:intergenic 25.0%
! GCAAATTATCTCAAATTCAT+CGG + chr5.2:65233264-65233283 MS.gene063583:intron 25.0%
! TATAAATGTTGTAGTCGAAA+AGG - chr5.2:65233565-65233584 None:intergenic 25.0%
!! CTATTTTCCTATTGAAATCT+TGG + chr5.2:65233209-65233228 MS.gene063583:intron 25.0%
!!! AAACACAAACAACCTTTTTT+TGG - chr5.2:65233301-65233320 None:intergenic 25.0%
!!! TATTGATTTAATGGCAATTG+TGG + chr5.2:65233370-65233389 MS.gene063583:intron 25.0%
AAATAGCCAAAGCAAAGAAT+AGG - chr5.2:65233195-65233214 None:intergenic 30.0%
CAAAGCAAAGAATAGGATAT+AGG - chr5.2:65233188-65233207 None:intergenic 30.0%
CAAATGTTGGATGTACTAAT+CGG - chr5.2:65233623-65233642 None:intergenic 30.0%
CTATATCCTATTCTTTGCTT+TGG + chr5.2:65233186-65233205 MS.gene063583:intron 30.0%
GTCTGATTTCTTAACTCTAA+GGG - chr5.2:65233441-65233460 None:intergenic 30.0%
GTTCTTCAAGAGGAAAATTA+TGG + chr5.2:65232897-65232916 MS.gene063583:CDS 30.0%
TGTCTGATTTCTTAACTCTA+AGG - chr5.2:65233442-65233461 None:intergenic 30.0%
! ATTTTCCTCTTGAAGAACAA+TGG - chr5.2:65232895-65232914 None:intergenic 30.0%
!! GTTTTTCAAACGCCAAAAAA+AGG + chr5.2:65233286-65233305 MS.gene063583:intron 30.0%
AAATGTGAACTATGGTTGCA+GGG + chr5.2:65232671-65232690 MS.gene063583:CDS 35.0%
AACAAAGTCACAACCTGAAA+AGG - chr5.2:65232763-65232782 None:intergenic 35.0%
ACAAAGTCACAACCTGAAAA+GGG - chr5.2:65232762-65232781 None:intergenic 35.0%
ATAGGATATAGGAAATACCG+TGG - chr5.2:65233177-65233196 None:intergenic 35.0%
ATCATAACTATACTCGGACT+CGG - chr5.2:65233000-65233019 None:intergenic 35.0%
CAGATCCAAATCTTTGTACA+GGG + chr5.2:65233395-65233414 MS.gene063583:intron 35.0%
GAGTTTCTTGTGATTCCATT+TGG + chr5.2:65233107-65233126 MS.gene063583:CDS 35.0%
GGTTTCATCATTAGACTTCA+AGG - chr5.2:65232874-65232893 None:intergenic 35.0%
TATTGCAAAGAATGTCCAAC+AGG + chr5.2:65233061-65233080 MS.gene063583:CDS 35.0%
TCATGTCCAAATGTGAACTA+TGG + chr5.2:65232663-65232682 MS.gene063583:CDS 35.0%
TGAAACCATTGTTCTTCAAG+AGG + chr5.2:65232887-65232906 MS.gene063583:CDS 35.0%
!! ATGCAAATTTCTAGCTTGAG+AGG - chr5.2:65233143-65233162 None:intergenic 35.0%
!! GATTTGCTAAAGTAACCTGT+TGG - chr5.2:65233079-65233098 None:intergenic 35.0%
AGACTTCAAGGAGACAATGA+AGG - chr5.2:65232862-65232881 None:intergenic 40.0%
AGAGGTTCAGAAGAACCAAA+TGG - chr5.2:65233125-65233144 None:intergenic 40.0%
CAAATGTGAACTATGGTTGC+AGG + chr5.2:65232670-65232689 MS.gene063583:CDS 40.0%
CTGCAACCATAGTTCACATT+TGG - chr5.2:65232672-65232691 None:intergenic 40.0%
GAATCATTCCTCTCACTCTA+CGG + chr5.2:65233587-65233606 MS.gene063583:CDS 40.0%
GCAGATCCAAATCTTTGTAC+AGG + chr5.2:65233394-65233413 MS.gene063583:intron 40.0%
GTGCATTTCAGCGATAAACA+CGG + chr5.2:65232804-65232823 MS.gene063583:CDS 40.0%
TCATAACTATACTCGGACTC+GGG - chr5.2:65232999-65233018 None:intergenic 40.0%
TGCATTTCAGCGATAAACAC+GGG + chr5.2:65232805-65232824 MS.gene063583:CDS 40.0%
! GCAGTCAATATTTGCTGCTT+TGG + chr5.2:65232963-65232982 MS.gene063583:CDS 40.0%
ACTGCCAAAGATCAGACGTT+GGG - chr5.2:65233519-65233538 None:intergenic 45.0%
AGGGACAGTAACATGGCTTA+CGG - chr5.2:65232743-65232762 None:intergenic 45.0%
CCTGAAAAGGGACAGTAACA+TGG - chr5.2:65232750-65232769 None:intergenic 45.0%
CTAGGCCCTGTACAAAGATT+TGG - chr5.2:65233403-65233422 None:intergenic 45.0%
GATCTTTGGCAGTAGATACC+TGG + chr5.2:65233526-65233545 MS.gene063583:CDS 45.0%
GCATTTCAGCGATAAACACG+GGG + chr5.2:65232806-65232825 MS.gene063583:CDS 45.0%
GGATATAGGAAATACCGTGG+AGG - chr5.2:65233174-65233193 None:intergenic 45.0%
GGGTCATATACTTTCCAGCT+AGG - chr5.2:65233421-65233440 None:intergenic 45.0%
TACTGCCAAAGATCAGACGT+TGG - chr5.2:65233520-65233539 None:intergenic 45.0%
TGACAAGACTAAGATCCCAG+TGG + chr5.2:65233490-65233509 MS.gene063583:CDS 45.0%
TGTTGTAGTCGAAAAGGGTC+AGG - chr5.2:65233559-65233578 None:intergenic 45.0%
TTGCATTCACGTAACCTCCA+CGG + chr5.2:65233157-65233176 MS.gene063583:CDS 45.0%
TTTGGCAGTAGATACCTGGA+TGG + chr5.2:65233530-65233549 MS.gene063583:CDS 45.0%
! CCATGTTACTGTCCCTTTTC+AGG + chr5.2:65232747-65232766 MS.gene063583:CDS 45.0%
AAAGGGTCAGGTTTCCATCC+AGG - chr5.2:65233547-65233566 None:intergenic 50.0%
ATCGTCTTCCGTAGAGTGAG+AGG - chr5.2:65233598-65233617 None:intergenic 50.0%
ATCTTTGTACAGGGCCTAGC+TGG + chr5.2:65233404-65233423 MS.gene063583:CDS 50.0%
GCCAAAGATCAGACGTTGGG+CGG - chr5.2:65233516-65233535 None:intergenic 55.0%
GCCGCCCAACGTCTGATCTT+TGG + chr5.2:65233512-65233531 MS.gene063583:CDS 60.0%
TACTCGGACTCGGGTGTGTC+TGG - chr5.2:65232990-65233009 None:intergenic 60.0%
ATCAGACGTTGGGCGGCCAC+TGG - chr5.2:65233509-65233528 None:intergenic 65.0%
TCAGACGTTGGGCGGCCACT+GGG - chr5.2:65233508-65233527 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 65232660 65233643 65232660 ID=MS.gene063583
chr5.2 mRNA 65232660 65233643 65232660 ID=MS.gene063583.t1;Parent=MS.gene063583
chr5.2 exon 65232660 65233178 65232660 ID=MS.gene063583.t1.exon1;Parent=MS.gene063583.t1
chr5.2 CDS 65232660 65233178 65232660 ID=cds.MS.gene063583.t1;Parent=MS.gene063583.t1
chr5.2 exon 65233398 65233643 65233398 ID=MS.gene063583.t1.exon2;Parent=MS.gene063583.t1
chr5.2 CDS 65233398 65233643 65233398 ID=cds.MS.gene063583.t1;Parent=MS.gene063583.t1
Gene Sequence

>MS.gene063583

ATGTCATGTCCAAATGTGAACTATGGTTGCAGGGAGAAAATAAGTTACACTAGAAAGAGGATGCATGAAGAACAATGCATCCGTAAGCCATGTTACTGTCCCTTTTCAGGTTGTGACTTTGTTCAATCATCAAACATGTTTTCTGTGCATTTCAGCGATAAACACGGGGATTATCAAATCAAATTTTCTTATGGGATATCCTTCATTGTCTCCTTGAAGTCTAATGATGAAACCATTGTTCTTCAAGAGGAAAATTATGGCAAACTCTTTACTCTCAATAATAATACTACTCTTTTAGGAAATGCAGTCAATATTTGCTGCTTTGGTCCAGACACACCCGAGTCCGAGTATAGTTATGATATATTGTCTACGTCTCAGTTATGCAAACTGAAATTACAATCTATTGCAAAGAATGTCCAACAGGTTACTTTAGCAAATCTTTCATCAGAGTTTCTTGTGATTCCATTTGGTTCTTCTGAACCTCTCAAGCTAGAAATTTGCATTCACGTAACCTCCACGGTATTTCCTATATCCTATTCTTTGCTTTGGCTATTTTCCTATTGAAATCTTGGTATTTTATTTTATGTTTTGAATTTATACTCTAGCAAATTATCTCAAATTCATCGGTTTTTCAAACGCCAAAAAAAGGTTGTTTGTGTTTTCTATTTTTTGATAAATTCTTGAAGTATCATAAGTCTCAAACTTTCTTTTATTGATTTAATGGCAATTGTGGTGCAGATCCAAATCTTTGTACAGGGCCTAGCTGGAAAGTATATGACCCTTAGAGTTAAGAAATCAGACAAGTTAGACAAATTGAAAGAGATGATTCATGACAAGACTAAGATCCCAGTGGCCGCCCAACGTCTGATCTTTGGCAGTAGATACCTGGATGGAAACCTGACCCTTTTCGACTACAACATTTATAACGAATCATTCCTCTCACTCTACGGAAGACGATTGCCGATTAGTACATCCAACATTTGA

Protein sequence

>MS.gene063583.t1

MSCPNVNYGCREKISYTRKRMHEEQCIRKPCYCPFSGCDFVQSSNMFSVHFSDKHGDYQIKFSYGISFIVSLKSNDETIVLQEENYGKLFTLNNNTTLLGNAVNICCFGPDTPESEYSYDILSTSQLCKLKLQSIAKNVQQVTLANLSSEFLVIPFGSSEPLKLEICIHVTSTIQIFVQGLAGKYMTLRVKKSDKLDKLKEMIHDKTKIPVAAQRLIFGSRYLDGNLTLFDYNIYNESFLSLYGRRLPISTSNI