AlfalfaGEDB | MS.gene063610

M. sativa cultivar XinJiangDaYe / MS.gene063610

KEGG: K04506
GO: GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005634 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009987 GO:0019538 GO:0019941 GO:0032501 GO:0032502 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0046872 GO:0046914 GO:0048856 GO:0051603 GO:0071704 GO:0110165 GO:1901564 GO:1901575
PFAM: PF00240.26 PF03145.19

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063610.t1	XP_003615393.1	72.7	319	84	1	1	319	1	316	2.00E-128	468.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063610.t1	Q84K34	35.0	217	140	1	9	224	108	324	9.2e-37	155.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063610.t1	G7K621	72.7	319	84	1	1	319	1	316	1.5e-128	468.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene017314	MS.gene063610	PPI
MS.gene063610	MS.gene74054	PPI
MS.gene68940	MS.gene063610	PPI
MS.gene032536	MS.gene063610	PPI
MS.gene063610	MS.gene023735	PPI
MS.gene063610	MS.gene016802	PPI
MS.gene063610	MS.gene017337	PPI
MS.gene053692	MS.gene063610	PPI
MS.gene044969	MS.gene063610	PPI
MS.gene92432	MS.gene063610	PPI
MS.gene92433	MS.gene063610	PPI
MS.gene025072	MS.gene063610	PPI
MS.gene52735	MS.gene063610	PPI
MS.gene26198	MS.gene063610	PPI
MS.gene063610	MS.gene062459	PPI
MS.gene009576	MS.gene063610	PPI
MS.gene032535	MS.gene063610	PPI
MS.gene25827	MS.gene063610	PPI
MS.gene26202	MS.gene063610	PPI
MS.gene037087	MS.gene063610	PPI
MS.gene063610	MS.gene009573	PPI
MS.gene70750	MS.gene063610	PPI
MS.gene017318	MS.gene063610	PPI
MS.gene26189	MS.gene063610	PPI
MS.gene26186	MS.gene063610	PPI
MS.gene016802	MS.gene063610	PPI
MS.gene26190	MS.gene063610	PPI
MS.gene053691	MS.gene063610	PPI
MS.gene009560	MS.gene063610	PPI
MS.gene063584	MS.gene063610	PPI
MS.gene009562	MS.gene063610	PPI
MS.gene063610	MS.gene063596	PPI
MS.gene063610	MS.gene26202	PPI
MS.gene063581	MS.gene063610	PPI
MS.gene063610	MS.gene032536	PPI
MS.gene063610	MS.gene025074	PPI
MS.gene41691	MS.gene063610	PPI
MS.gene04692	MS.gene063610	PPI
MS.gene063610	MS.gene063586	PPI
MS.gene063610	MS.gene064974	PPI
MS.gene063603	MS.gene063610	PPI
MS.gene044971	MS.gene063610	PPI
MS.gene042174	MS.gene063610	PPI
MS.gene72920	MS.gene063610	PPI
MS.gene61945	MS.gene063610	PPI
MS.gene063598	MS.gene063610	PPI
MS.gene81557	MS.gene063610	PPI
MS.gene063583	MS.gene063610	PPI
MS.gene009566	MS.gene063610	PPI
MS.gene92429	MS.gene063610	PPI
MS.gene009543	MS.gene063610	PPI
MS.gene009577	MS.gene063610	PPI
MS.gene063610	MS.gene063587	PPI
MS.gene017308	MS.gene063610	PPI
MS.gene92430	MS.gene063610	PPI
MS.gene010031	MS.gene063610	PPI
MS.gene009573	MS.gene063610	PPI
MS.gene53617	MS.gene063610	PPI
MS.gene94985	MS.gene063610	PPI
MS.gene017337	MS.gene063610	PPI
MS.gene017324	MS.gene063610	PPI
MS.gene017315	MS.gene063610	PPI
MS.gene063610	MS.gene94984	PPI
MS.gene009561	MS.gene063610	PPI
MS.gene063610	MS.gene92427	PPI
MS.gene26197	MS.gene063610	PPI
MS.gene063599	MS.gene063610	PPI
MS.gene26191	MS.gene063610	PPI
MS.gene063610	MS.gene009564	PPI
MS.gene73977	MS.gene063610	PPI
MS.gene81818	MS.gene063610	PPI
MS.gene017316	MS.gene063610	PPI
MS.gene92435	MS.gene063610	PPI
MS.gene064975	MS.gene063610	PPI
MS.gene64287	MS.gene063610	PPI
MS.gene009564	MS.gene063610	PPI
MS.gene009570	MS.gene063610	PPI
MS.gene063586	MS.gene063610	PPI
MS.gene73973	MS.gene063610	PPI
MS.gene063610	MS.gene53619	PPI
MS.gene062462	MS.gene063610	PPI
MS.gene009559	MS.gene063610	PPI
MS.gene012651	MS.gene063610	PPI
MS.gene044173	MS.gene063610	PPI
MS.gene73975	MS.gene063610	PPI
MS.gene063610	MS.gene94985	PPI
MS.gene53618	MS.gene063610	PPI
MS.gene063587	MS.gene063610	PPI
MS.gene025074	MS.gene063610	PPI
MS.gene74055	MS.gene063610	PPI
MS.gene063596	MS.gene063610	PPI
MS.gene063610	MS.gene21254	PPI
MS.gene009547	MS.gene063610	PPI
MS.gene063589	MS.gene063610	PPI
MS.gene53616	MS.gene063610	PPI
MS.gene64288	MS.gene063610	PPI
MS.gene009591	MS.gene063610	PPI
MS.gene39862	MS.gene063610	PPI
MS.gene81807	MS.gene063610	PPI
MS.gene21254	MS.gene063610	PPI
MS.gene017309	MS.gene063610	PPI
MS.gene063576	MS.gene063610	PPI
MS.gene023735	MS.gene063610	PPI
MS.gene062461	MS.gene063610	PPI
MS.gene017321	MS.gene063610	PPI
MS.gene37878	MS.gene063610	PPI
MS.gene063610	MS.gene017300	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063610.t1	MTR_5g067400	72.727	319	84	1	1	319	1	316	4.13e-166	464
MS.gene063610.t1	MTR_1g046640	71.473	319	87	2	1	319	1	315	7.90e-161	451
MS.gene063610.t1	MTR_1g046650	68.652	319	96	2	1	319	1	315	1.04e-154	436
MS.gene063610.t1	MTR_1g046650	68.652	319	96	2	1	319	32	346	2.52e-154	436
MS.gene063610.t1	MTR_7g094390	68.889	315	95	1	4	318	165	476	4.75e-152	435
MS.gene063610.t1	MTR_7g024290	67.712	319	99	2	1	318	1	316	5.53e-150	424
MS.gene063610.t1	MTR_5g076520	68.038	316	100	1	1	315	1	316	1.55e-149	423
MS.gene063610.t1	MTR_5g076720	64.444	315	112	0	4	318	75	389	1.07e-145	416
MS.gene063610.t1	MTR_5g076820	76.667	270	59	3	11	278	19	286	2.16e-145	411
MS.gene063610.t1	MTR_1g046650	68.027	294	90	2	26	319	26	315	1.28e-139	397
MS.gene063610.t1	MTR_5g076505	66.781	292	97	0	27	318	23	314	5.68e-138	393
MS.gene063610.t1	MTR_5g076810	72.794	272	70	2	49	319	2	270	8.45e-138	391
MS.gene063610.t1	MTR_2g038420	62.776	317	116	1	4	318	18	334	2.76e-137	392
MS.gene063610.t1	MTR_5g076660	63.924	316	108	2	4	316	26	338	3.14e-136	390
MS.gene063610.t1	MTR_2g038430	59.692	325	121	1	4	318	18	342	1.05e-135	389
MS.gene063610.t1	MTR_5g061290	62.069	319	114	4	4	318	11	326	2.97e-134	384
MS.gene063610.t1	MTR_5g076370	61.321	318	116	3	3	316	25	339	4.89e-131	377
MS.gene063610.t1	MTR_1g046650	66.800	250	79	2	70	319	1	246	3.24e-115	333
MS.gene063610.t1	MTR_5g076540	72.807	228	62	0	1	228	1	228	5.59e-114	330
MS.gene063610.t1	MTR_5g077020	59.701	201	65	5	53	244	17	210	6.02e-71	219
MS.gene063610.t1	MTR_4g094468	47.059	221	114	3	5	224	91	309	1.08e-63	204
MS.gene063610.t1	MTR_4g058025	69.531	128	38	1	68	194	1	128	6.12e-54	175
MS.gene063610.t1	MTR_7g085590	27.723	202	131	3	6	203	58	248	8.58e-24	99.0
MS.gene063610.t1	MTR_7g105080	60.526	76	30	0	244	319	1	76	1.06e-22	91.7
MS.gene063610.t1	MTR_3g092130	60.526	76	30	0	244	319	1	76	1.06e-22	91.7
MS.gene063610.t1	MTR_1g059690	60.526	76	30	0	244	319	1	76	1.06e-22	91.7
MS.gene063610.t1	MTR_8g088060	60.526	76	30	0	244	319	1	76	1.54e-22	92.0
MS.gene063610.t1	MTR_5g033960	60.526	76	30	0	244	319	1	76	1.61e-22	92.0
MS.gene063610.t1	MTR_5g092700	60.526	76	30	0	244	319	1	76	2.26e-22	91.7
MS.gene063610.t1	MTR_5g092700	43.243	74	42	0	246	319	79	152	4.65e-12	63.5
MS.gene063610.t1	MTR_4g073580	60.526	76	30	0	244	319	1	76	2.26e-22	91.7
MS.gene063610.t1	MTR_4g073580	43.243	74	42	0	246	319	79	152	4.65e-12	63.5
MS.gene063610.t1	MTR_3g092130	60.526	76	30	0	244	319	1	76	3.19e-22	90.9
MS.gene063610.t1	MTR_4g073580	60.526	76	30	0	244	319	1	76	6.43e-22	91.3
MS.gene063610.t1	MTR_4g088485	60.526	76	30	0	244	319	1	76	8.96e-22	91.7
MS.gene063610.t1	MTR_4g088485	60.526	76	30	0	244	319	138	213	8.96e-22	91.7
MS.gene063610.t1	MTR_4g088485	48.684	76	24	1	244	319	77	137	1.45e-13	68.9
MS.gene063610.t1	MTR_1g066390	60.526	76	30	0	244	319	1	76	1.33e-21	91.7
MS.gene063610.t1	MTR_1g066390	60.526	76	30	0	244	319	77	152	1.33e-21	91.7
MS.gene063610.t1	MTR_1g066390	60.526	76	30	0	244	319	153	228	1.33e-21	91.7
MS.gene063610.t1	MTR_7g116360	60.526	76	30	0	244	319	1	76	1.44e-21	91.7
MS.gene063610.t1	MTR_7g116360	60.526	76	30	0	244	319	77	152	1.44e-21	91.7
MS.gene063610.t1	MTR_7g116360	60.526	76	30	0	244	319	153	228	1.44e-21	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	1	76	3.36e-21	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	77	152	3.36e-21	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	153	228	3.36e-21	91.7
MS.gene063610.t1	MTR_7g116360	60.526	76	30	0	244	319	49	124	4.18e-21	91.3
MS.gene063610.t1	MTR_7g116360	60.526	76	30	0	244	319	125	200	4.18e-21	91.3
MS.gene063610.t1	MTR_7g116360	60.526	76	30	0	244	319	201	276	4.18e-21	91.3
MS.gene063610.t1	MTR_6g061930	60.526	76	30	0	244	319	1	76	4.25e-21	91.7
MS.gene063610.t1	MTR_6g061930	60.526	76	30	0	244	319	77	152	4.25e-21	91.7
MS.gene063610.t1	MTR_6g061930	60.526	76	30	0	244	319	214	289	4.25e-21	91.7
MS.gene063610.t1	MTR_6g061930	47.368	76	25	1	244	319	153	213	2.19e-12	67.0
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	1	76	5.27e-21	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	77	152	5.27e-21	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	153	228	5.27e-21	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	229	304	5.27e-21	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	1	76	6.62e-21	90.9
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	77	152	6.62e-21	90.9
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	153	228	6.62e-21	90.9
MS.gene063610.t1	MTR_4g080920	59.211	76	31	0	244	319	77	152	7.57e-21	89.7
MS.gene063610.t1	MTR_4g080920	59.211	76	31	0	244	319	1	76	1.69e-20	88.6
MS.gene063610.t1	MTR_4g080920	50.000	76	38	0	244	319	153	228	3.74e-16	76.6
MS.gene063610.t1	MTR_8g081020	60.526	76	30	0	244	319	1	76	1.11e-20	91.7
MS.gene063610.t1	MTR_8g081020	60.526	76	30	0	244	319	77	152	1.11e-20	91.7
MS.gene063610.t1	MTR_8g081020	60.526	76	30	0	244	319	153	228	1.11e-20	91.7
MS.gene063610.t1	MTR_8g081020	60.526	76	30	0	244	319	229	304	1.11e-20	91.7
MS.gene063610.t1	MTR_8g081020	60.526	76	30	0	244	319	305	380	1.11e-20	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	1	76	1.19e-20	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	77	152	1.19e-20	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	153	228	1.19e-20	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	229	304	1.19e-20	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	305	380	1.19e-20	91.7
MS.gene063610.t1	MTR_4g080797	60.526	76	30	0	244	319	1	76	1.20e-20	91.7
MS.gene063610.t1	MTR_4g080797	60.526	76	30	0	244	319	77	152	1.20e-20	91.7
MS.gene063610.t1	MTR_4g080797	60.526	76	30	0	244	319	153	228	1.20e-20	91.7
MS.gene063610.t1	MTR_4g080797	60.526	76	30	0	244	319	229	304	1.20e-20	91.7
MS.gene063610.t1	MTR_4g080797	60.526	76	30	0	244	319	305	380	1.20e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	1	76	1.20e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	77	152	1.20e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	153	228	1.20e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	229	304	1.20e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	305	380	1.20e-20	91.7
MS.gene063610.t1	MTR_4g091580	60.526	76	30	0	244	319	305	380	1.22e-20	92.8
MS.gene063610.t1	MTR_4g091580	60.526	76	30	0	244	319	1	76	2.69e-20	91.7
MS.gene063610.t1	MTR_4g091580	60.526	76	30	0	244	319	77	152	2.69e-20	91.7
MS.gene063610.t1	MTR_4g091580	60.526	76	30	0	244	319	153	228	2.69e-20	91.7
MS.gene063610.t1	MTR_4g091580	60.526	76	30	0	244	319	229	304	2.69e-20	91.7
MS.gene063610.t1	MTR_4g091580	60.526	76	30	0	244	319	381	456	2.69e-20	91.7
MS.gene063610.t1	MTR_4g091580	60.526	76	30	0	244	319	457	532	2.69e-20	91.7
MS.gene063610.t1	MTR_4g091580	60.526	76	30	0	244	319	1	76	1.24e-20	91.7
MS.gene063610.t1	MTR_4g091580	60.526	76	30	0	244	319	77	152	1.24e-20	91.7
MS.gene063610.t1	MTR_4g091580	60.526	76	30	0	244	319	153	228	1.24e-20	91.7
MS.gene063610.t1	MTR_4g091580	60.526	76	30	0	244	319	305	380	1.24e-20	91.7
MS.gene063610.t1	MTR_4g091580	59.211	76	31	0	244	319	229	304	4.06e-20	90.1
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	1	76	1.92e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	77	152	1.92e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	153	228	1.92e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	229	304	1.92e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	305	380	1.92e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	381	456	1.92e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	1	76	1.92e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	77	152	1.92e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	153	228	1.92e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	229	304	1.92e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	305	380	1.92e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	381	456	1.92e-20	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	1	76	2.36e-20	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	77	152	2.36e-20	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	153	228	2.36e-20	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	229	304	2.36e-20	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	305	380	2.36e-20	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	381	456	2.36e-20	91.7
MS.gene063610.t1	MTR_4g081010	60.526	76	30	0	244	319	457	532	2.36e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	1	76	2.47e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	77	152	2.47e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	153	228	2.47e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	229	304	2.47e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	305	380	2.47e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	381	456	2.47e-20	91.7
MS.gene063610.t1	MTR_8g018230	60.526	76	30	0	244	319	457	532	2.47e-20	91.7
MS.gene063610.t1	MTR_4g088495	60.526	76	30	0	244	319	77	152	3.08e-20	91.7
MS.gene063610.t1	MTR_4g088495	60.526	76	30	0	244	319	153	228	3.08e-20	91.7
MS.gene063610.t1	MTR_4g088495	60.526	76	30	0	244	319	229	304	3.08e-20	91.7
MS.gene063610.t1	MTR_4g088495	60.526	76	30	0	244	319	305	380	3.08e-20	91.7
MS.gene063610.t1	MTR_4g088495	60.526	76	30	0	244	319	381	456	3.08e-20	91.7
MS.gene063610.t1	MTR_4g088495	60.526	76	30	0	244	319	457	532	3.08e-20	91.7
MS.gene063610.t1	MTR_4g088495	60.526	76	30	0	244	319	533	608	3.08e-20	91.7
MS.gene063610.t1	MTR_4g088495	60.526	76	30	0	244	319	609	684	3.08e-20	91.7
MS.gene063610.t1	MTR_4g088495	60.526	76	30	0	244	319	685	760	3.08e-20	91.7
MS.gene063610.t1	MTR_4g088495	60.526	76	30	0	244	319	761	836	3.08e-20	91.7
MS.gene063610.t1	MTR_4g088495	60.526	76	30	0	244	319	1	76	3.45e-20	91.7
MS.gene063610.t1	MTR_3g017590	27.823	248	154	9	10	235	52	296	4.96e-20	89.0
MS.gene063610.t1	MTR_5g061310	58.442	77	32	0	243	319	1	77	5.96e-20	82.8
MS.gene063610.t1	MTR_8g038370	27.642	246	157	7	10	235	111	355	1.13e-19	88.6
MS.gene063610.t1	MTR_1g054335	27.751	209	141	5	11	209	58	266	1.38e-18	85.1
MS.gene063610.t1	MTR_8g479250	57.143	84	36	0	236	319	133	216	2.65e-17	81.3
MS.gene063610.t1	MTR_8g479250	50.000	72	25	1	244	315	217	277	8.93e-12	65.1
MS.gene063610.t1	MTR_5g076740	54.430	79	35	1	241	318	83	161	6.66e-17	77.4
MS.gene063610.t1	MTR_8g027520	33.051	118	77	1	10	125	52	169	4.80e-16	77.8
MS.gene063610.t1	MTR_8g027520	33.051	118	77	1	10	125	43	160	5.70e-16	77.4
MS.gene063610.t1	MTR_3g091510	32.203	118	78	1	10	125	59	176	5.86e-16	77.8
MS.gene063610.t1	MTR_4g009980	48.485	66	34	0	253	318	5	70	6.93e-16	71.6
MS.gene063610.t1	MTR_7g093600	25.306	245	162	7	11	235	59	302	6.98e-16	77.4
MS.gene063610.t1	MTR_5g076760	63.158	57	21	0	254	310	5	61	1.22e-15	71.2
MS.gene063610.t1	MTR_1g008120	32.203	118	78	1	10	125	67	184	2.05e-15	76.3
MS.gene063610.t1	MTR_7g117415	31.897	116	77	1	11	124	61	176	1.09e-14	73.9
MS.gene063610.t1	MTR_5g076780	55.932	59	26	0	258	316	4	62	5.90e-14	66.2
MS.gene063610.t1	MTR_5g076340	47.436	78	39	2	244	319	9	86	6.20e-13	63.9
MS.gene063610.t1	MTR_5g076350	47.368	76	39	1	244	318	8	83	6.64e-13	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063610.t1	AT5G37930	34.335	233	149	2	9	237	108	340	1.34e-41	147
MS.gene063610.t1	AT1G66620	35.021	237	141	5	11	237	41	274	1.16e-39	142
MS.gene063610.t1	AT5G37870	34.222	225	143	5	5	224	36	260	4.20e-38	137
MS.gene063610.t1	AT5G37890	33.333	228	140	6	5	224	42	265	6.53e-36	131
MS.gene063610.t1	AT1G66630	32.579	221	142	4	11	224	46	266	4.86e-31	119
MS.gene063610.t1	AT5G37910	30.204	245	156	4	11	249	35	270	7.86e-31	117
MS.gene063610.t1	AT5G62800	36.517	178	108	3	11	183	40	217	3.52e-28	111
MS.gene063610.t1	AT5G62800	36.517	178	108	3	11	183	40	217	3.89e-28	112
MS.gene063610.t1	AT1G66650	31.092	238	153	5	11	237	83	320	4.68e-28	111
MS.gene063610.t1	AT1G66610	27.465	284	134	7	11	224	53	334	9.18e-24	100
MS.gene063610.t1	AT1G66660	27.711	249	164	6	11	246	103	348	5.38e-23	97.8
MS.gene063610.t1	AT3G52590	60.526	76	30	0	244	319	1	76	1.31e-22	91.7
MS.gene063610.t1	AT2G36170	60.526	76	30	0	244	319	1	76	1.31e-22	91.7
MS.gene063610.t1	AT1G23410	60.526	76	30	0	244	319	1	76	1.68e-22	92.0
MS.gene063610.t1	AT2G47110	60.526	76	30	0	244	319	1	76	1.74e-22	92.0
MS.gene063610.t1	AT2G47110	60.526	76	30	0	244	319	1	76	1.74e-22	92.0
MS.gene063610.t1	AT3G62250	60.526	76	30	0	244	319	1	76	1.89e-22	92.0
MS.gene063610.t1	AT2G35635	60.526	76	30	0	244	319	1	76	2.17e-22	92.0
MS.gene063610.t1	AT2G35635	41.892	74	43	0	246	319	79	152	3.00e-11	61.2
MS.gene063610.t1	AT4G05050	60.526	76	30	0	244	319	1	76	2.63e-22	91.7
MS.gene063610.t1	AT4G05050	60.526	76	30	0	244	319	77	152	2.63e-22	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	1	76	2.63e-22	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	77	152	2.63e-22	91.7
MS.gene063610.t1	AT1G31340	60.526	76	30	0	244	319	1	76	2.67e-22	91.7
MS.gene063610.t1	AT1G31340	43.243	74	42	0	246	319	79	152	3.10e-12	63.9
MS.gene063610.t1	AT4G05050	60.526	76	30	0	244	319	1	76	1.51e-21	91.7
MS.gene063610.t1	AT4G05050	60.526	76	30	0	244	319	77	152	1.51e-21	91.7
MS.gene063610.t1	AT4G05050	60.526	76	30	0	244	319	153	228	1.51e-21	91.7
MS.gene063610.t1	AT4G05050	60.526	76	30	0	244	319	1	76	1.51e-21	91.7
MS.gene063610.t1	AT4G05050	60.526	76	30	0	244	319	77	152	1.51e-21	91.7
MS.gene063610.t1	AT4G05050	60.526	76	30	0	244	319	153	228	1.51e-21	91.7
MS.gene063610.t1	AT4G05050	60.526	76	30	0	244	319	1	76	1.51e-21	91.7
MS.gene063610.t1	AT4G05050	60.526	76	30	0	244	319	77	152	1.51e-21	91.7
MS.gene063610.t1	AT4G05050	60.526	76	30	0	244	319	153	228	1.51e-21	91.7
MS.gene063610.t1	AT4G02890	60.526	76	30	0	244	319	1	76	1.51e-21	91.7
MS.gene063610.t1	AT4G02890	60.526	76	30	0	244	319	77	152	1.51e-21	91.7
MS.gene063610.t1	AT4G02890	60.526	76	30	0	244	319	153	228	1.51e-21	91.7
MS.gene063610.t1	AT4G02890	60.526	76	30	0	244	319	1	76	1.51e-21	91.7
MS.gene063610.t1	AT4G02890	60.526	76	30	0	244	319	77	152	1.51e-21	91.7
MS.gene063610.t1	AT4G02890	60.526	76	30	0	244	319	153	228	1.51e-21	91.7
MS.gene063610.t1	AT1G55060	59.211	76	31	0	244	319	77	152	4.18e-21	90.5
MS.gene063610.t1	AT1G55060	57.895	76	32	0	244	319	153	228	2.90e-19	85.5
MS.gene063610.t1	AT1G55060	55.263	76	34	0	244	319	1	76	3.24e-18	82.4
MS.gene063610.t1	AT5G03240	60.526	76	30	0	244	319	1	76	5.01e-21	91.7
MS.gene063610.t1	AT5G03240	60.526	76	30	0	244	319	77	152	5.01e-21	91.7
MS.gene063610.t1	AT5G03240	60.526	76	30	0	244	319	153	228	5.01e-21	91.7
MS.gene063610.t1	AT5G03240	60.526	76	30	0	244	319	229	304	5.01e-21	91.7
MS.gene063610.t1	AT5G03240	60.526	76	30	0	244	319	1	76	5.01e-21	91.7
MS.gene063610.t1	AT5G03240	60.526	76	30	0	244	319	77	152	5.01e-21	91.7
MS.gene063610.t1	AT5G03240	60.526	76	30	0	244	319	153	228	5.01e-21	91.7
MS.gene063610.t1	AT5G03240	60.526	76	30	0	244	319	229	304	5.01e-21	91.7
MS.gene063610.t1	AT5G03240	60.526	76	30	0	244	319	1	76	5.01e-21	91.7
MS.gene063610.t1	AT5G03240	60.526	76	30	0	244	319	77	152	5.01e-21	91.7
MS.gene063610.t1	AT5G03240	60.526	76	30	0	244	319	153	228	5.01e-21	91.7
MS.gene063610.t1	AT5G03240	60.526	76	30	0	244	319	229	304	5.01e-21	91.7
MS.gene063610.t1	AT5G20620	60.526	76	30	0	244	319	1	76	5.01e-21	91.7
MS.gene063610.t1	AT5G20620	60.526	76	30	0	244	319	77	152	5.01e-21	91.7
MS.gene063610.t1	AT5G20620	60.526	76	30	0	244	319	153	228	5.01e-21	91.7
MS.gene063610.t1	AT5G20620	60.526	76	30	0	244	319	229	304	5.01e-21	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	1	76	5.30e-21	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	77	152	5.30e-21	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	153	228	5.30e-21	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	229	304	5.30e-21	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	1	76	5.30e-21	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	77	152	5.30e-21	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	153	228	5.30e-21	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	229	304	5.30e-21	91.7
MS.gene063610.t1	AT4G02890	60.526	76	30	0	244	319	1	76	5.30e-21	91.7
MS.gene063610.t1	AT4G02890	60.526	76	30	0	244	319	77	152	5.30e-21	91.7
MS.gene063610.t1	AT4G02890	60.526	76	30	0	244	319	153	228	5.30e-21	91.7
MS.gene063610.t1	AT4G02890	60.526	76	30	0	244	319	229	304	5.30e-21	91.7
MS.gene063610.t1	AT4G02890	60.526	76	30	0	244	319	1	76	5.30e-21	91.7
MS.gene063610.t1	AT4G02890	60.526	76	30	0	244	319	77	152	5.30e-21	91.7
MS.gene063610.t1	AT4G02890	60.526	76	30	0	244	319	153	228	5.30e-21	91.7
MS.gene063610.t1	AT4G02890	60.526	76	30	0	244	319	229	304	5.30e-21	91.7
MS.gene063610.t1	AT1G65350	60.526	76	30	0	244	319	1	76	6.06e-21	91.7
MS.gene063610.t1	AT1G65350	59.211	76	31	0	244	319	152	227	7.64e-20	88.6
MS.gene063610.t1	AT1G65350	59.211	76	30	1	244	319	77	151	3.55e-18	84.0
MS.gene063610.t1	AT1G65350	48.889	90	32	1	244	319	228	317	1.15e-15	76.6
MS.gene063610.t1	AT5G20620	60.526	76	30	0	244	319	1	76	1.19e-20	91.7
MS.gene063610.t1	AT5G20620	60.526	76	30	0	244	319	77	152	1.19e-20	91.7
MS.gene063610.t1	AT5G20620	60.526	76	30	0	244	319	153	228	1.19e-20	91.7
MS.gene063610.t1	AT5G20620	60.526	76	30	0	244	319	229	304	1.19e-20	91.7
MS.gene063610.t1	AT5G20620	60.526	76	30	0	244	319	305	380	1.19e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	1	76	1.26e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	77	152	1.26e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	153	228	1.26e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	229	304	1.26e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	305	380	1.26e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	1	76	1.26e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	77	152	1.26e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	153	228	1.26e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	229	304	1.26e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	305	380	1.26e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	1	76	1.26e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	77	152	1.26e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	153	228	1.26e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	229	304	1.26e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	305	380	1.26e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	1	76	2.01e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	77	152	2.01e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	153	228	2.01e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	229	304	2.01e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	305	380	2.01e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	381	456	2.01e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	1	76	2.01e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	77	152	2.01e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	153	228	2.01e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	229	304	2.01e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	305	380	2.01e-20	91.7
MS.gene063610.t1	AT4G05320	60.526	76	30	0	244	319	381	456	2.01e-20	91.7
MS.gene063610.t1	AT5G37640	57.895	76	32	0	244	319	79	154	4.89e-20	89.4
MS.gene063610.t1	AT5G37640	57.895	76	32	0	244	319	155	230	1.39e-18	85.1
MS.gene063610.t1	AT5G37640	55.844	77	33	1	244	319	231	307	3.87e-16	78.2
MS.gene063610.t1	AT5G37640	51.316	76	37	0	244	319	3	78	5.98e-14	72.0
MS.gene063610.t1	AT1G53930	43.697	119	57	2	208	316	40	158	1.57e-19	84.3
MS.gene063610.t1	AT3G09790	59.211	76	31	0	244	319	79	154	2.07e-18	86.3
MS.gene063610.t1	AT3G09790	55.263	76	34	0	244	319	3	78	1.86e-17	83.6
MS.gene063610.t1	AT3G09790	45.299	117	51	3	207	316	514	624	7.74e-17	81.6
MS.gene063610.t1	AT3G09790	59.211	76	31	0	244	319	79	154	2.07e-18	86.3
MS.gene063610.t1	AT3G09790	55.263	76	34	0	244	319	3	78	1.86e-17	83.6
MS.gene063610.t1	AT3G09790	45.299	117	51	3	207	316	514	624	7.74e-17	81.6
MS.gene063610.t1	AT4G27880	33.051	118	77	1	10	125	60	177	1.58e-16	79.3
MS.gene063610.t1	AT3G61790	32.203	118	78	1	10	125	59	176	5.90e-16	77.8
MS.gene063610.t1	AT3G58040	31.356	118	79	1	10	125	56	173	2.27e-15	74.3
MS.gene063610.t1	AT3G58040	26.291	213	141	6	10	209	56	265	4.16e-15	75.1
MS.gene063610.t1	AT3G58040	26.291	213	141	6	10	209	56	265	4.16e-15	75.1
MS.gene063610.t1	AT2G41980	25.822	213	142	6	10	209	53	262	8.15e-15	74.3
MS.gene063610.t1	AT1G53950	47.222	72	38	0	243	314	68	139	1.30e-14	70.5
MS.gene063610.t1	AT1G11980	41.333	75	44	0	244	318	1	75	4.60e-13	64.3
MS.gene063610.t1	AT1G66610	47.761	67	35	0	6	72	153	219	2.51e-12	65.9
MS.gene063610.t1	AT1G66610	46.032	63	34	0	11	73	53	115	2.19e-11	63.2
MS.gene063610.t1	AT1G66660	26.047	215	145	7	43	246	13	224	4.35e-12	65.1
MS.gene063610.t1	AT5G37900	25.405	185	132	3	46	224	35	219	2.70e-11	63.2

Find 62 sgRNAs with CRISPR-Local

Find 156 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTAACTATTCCCGTCTTTC+AGG	0.148041	5.2:+65550109	MS.gene063610:CDS
CTTCTCTTGGATGTTGTAAT+TGG	0.203344	5.2:-65552176	None:intergenic
TTTGAGCAATCCAGCAATTT+AGG	0.206823	5.2:-65550074	None:intergenic
CCATGTTACTGCCCCATTTC+AGG	0.207561	5.2:+65551276	MS.gene063610:CDS
CAGCAACGTCTGATATTTAA+TGG	0.267693	5.2:+65552124	MS.gene063610:CDS
GGACACTTGTCCCTGAGTTT+AGG	0.350984	5.2:-65551099	None:intergenic
GCAAAGCCACAGCCTGAAAT+GGG	0.352254	5.2:-65551288	None:intergenic
GATTTCCAAACCTAAATTGC+TGG	0.361739	5.2:+65550064	MS.gene063610:CDS
AATACCTTTCAGTGTGATAA+TGG	0.362851	5.2:+65551051	MS.gene063610:intron
AGCAAAGCCACAGCCTGAAA+TGG	0.366312	5.2:-65551289	None:intergenic
TGAATATAGATATGATATAT+TGG	0.371515	5.2:+65551533	MS.gene063610:CDS
AAAATCGTCCTCCGCCTCAT+TGG	0.371832	5.2:+65552208	MS.gene063610:CDS
CAGTTTGCACATCTGAGATC+TGG	0.387247	5.2:-65551556	None:intergenic
GGTTTCATCGTTAGACTTCA+AGG	0.392913	5.2:-65551400	None:intergenic
GCAGTCAATATTTGCTGCCT+TGG	0.396567	5.2:+65551492	MS.gene063610:CDS
ATCAGACGTTGCTGGTGCAC+TGG	0.402649	5.2:-65552115	None:intergenic
TACTGCCCCATTTCAGGCTG+TGG	0.403013	5.2:+65551282	MS.gene063610:CDS
GCAATCCAGCAATTTAGGTT+TGG	0.405904	5.2:-65550069	None:intergenic
AAATCGTCCTCCGCCTCATT+GGG	0.429013	5.2:+65552209	MS.gene063610:CDS
TATTCAGGCTCAGAAGAGTT+AGG	0.441119	5.2:-65551516	None:intergenic
GATGTCCAGCGTGTTAGTTT+CGG	0.465267	5.2:+65551600	MS.gene063610:CDS
CTTGGATGTTGTAATTGGCA+AGG	0.467473	5.2:-65552171	None:intergenic
TGCTTGAACTATTAACCCTC+AGG	0.471360	5.2:-65552048	None:intergenic
GCTAATGGGCAATGAGCACC+TGG	0.472000	5.2:-65551121	None:intergenic
AATATATCATATCTATATTC+AGG	0.472602	5.2:-65551531	None:intergenic
GTCCCTGAGTTTAGGACGGC+AGG	0.485035	5.2:-65551091	None:intergenic
TGTTGTAATTGGCAAGGGTC+AGG	0.485877	5.2:-65552165	None:intergenic
GAGAAGATTCTTTACAAGGA+TGG	0.486719	5.2:+65552088	MS.gene063610:CDS
AGAAGATTCTTTACAAGGAT+GGG	0.489577	5.2:+65552089	MS.gene063610:CDS
CTACAACCATGTTCTGCATT+CGG	0.492029	5.2:-65551198	None:intergenic
CATTAAATATCAGACGTTGC+TGG	0.505010	5.2:-65552123	None:intergenic
AAGAACCAACTGGAATCAAA+AGG	0.515425	5.2:-65551641	None:intergenic
AGATAGCATTAGATTCTCAA+TGG	0.518713	5.2:-65551160	None:intergenic
AACTCAGGGACAAGTGTCCC+AGG	0.518766	5.2:+65551103	MS.gene063610:CDS
CTACCTGCCGTCCTAAACTC+AGG	0.526676	5.2:+65551088	MS.gene063610:CDS
TCAGACGTTGCTGGTGCACT+GGG	0.527386	5.2:-65552114	None:intergenic
CAAATGCATACCTGAAAGAC+GGG	0.541887	5.2:-65550119	None:intergenic
CCATTTCAGCCGAAAACACA+GGG	0.552201	5.2:+65551335	MS.gene063610:CDS
GAAGGAGAAGATTCTTTACA+AGG	0.554833	5.2:+65552084	MS.gene063610:CDS
TTGGATGTTGTAATTGGCAA+GGG	0.555821	5.2:-65552170	None:intergenic
CCTGAAATGGGGCAGTAACA+TGG	0.560573	5.2:-65551276	None:intergenic
GCAAATGCATACCTGAAAGA+CGG	0.578290	5.2:-65550120	None:intergenic
TCTAGCTCCCAATGAGGCGG+AGG	0.588912	5.2:-65552216	None:intergenic
ACCATTTCAGCCGAAAACAC+AGG	0.589019	5.2:+65551334	MS.gene063610:CDS
AGACTTCAAGGAGACAATGA+AGG	0.608582	5.2:-65551388	None:intergenic
CATAACTTGCATATACCCCA+TGG	0.610062	5.2:+65551689	MS.gene063610:CDS
CAAAGCCACAGCCTGAAATG+GGG	0.611057	5.2:-65551287	None:intergenic
AAGCACGATAGTCGATGTGA+AGG	0.623824	5.2:+65552066	MS.gene063610:CDS
TGGAAAGAGTACCTCCCTGA+GGG	0.630087	5.2:+65552033	MS.gene063610:CDS
TACCTGCCGTCCTAAACTCA+GGG	0.643156	5.2:+65551089	MS.gene063610:CDS
GAGTTCCGAAACTAACACGC+TGG	0.646605	5.2:-65551605	None:intergenic
TGGTCGTCTAGCTCCCAATG+AGG	0.652708	5.2:-65552222	None:intergenic
ACTTGTCCCTGAGTTTAGGA+CGG	0.653050	5.2:-65551095	None:intergenic
TCGTCTAGCTCCCAATGAGG+CGG	0.660556	5.2:-65552219	None:intergenic
TCATGTCCGAATGCAGAACA+TGG	0.662477	5.2:+65551192	MS.gene063610:CDS
GCTTGAACTATTAACCCTCA+GGG	0.668368	5.2:-65552047	None:intergenic
ATTTAATGGTAAGCAACTAG+AGG	0.674302	5.2:+65552138	MS.gene063610:CDS
GCTCAGAAGAGTTAGGACCA+AGG	0.692479	5.2:-65551509	None:intergenic
CTGGAAAGAGTACCTCCCTG+AGG	0.698792	5.2:+65552032	MS.gene063610:CDS
CTAATGGGCAATGAGCACCT+GGG	0.718908	5.2:-65551120	None:intergenic
CATTTCAGCCGAAAACACAG+GGG	0.775212	5.2:+65551336	MS.gene063610:CDS
TGAACTATTAACCCTCAGGG+AGG	0.793429	5.2:-65552044	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATTTATTACAAAAAACA+GGG	-	chr5.2:65551922-65551941	None:intergenic	10.0%
!!	AAATAAAGAAATAAAAGAAA+AGG	-	chr5.2:65551727-65551746	None:intergenic	10.0%
!!!	TTTTATTTTATTCTAACAAA+TGG	+	chr5.2:65550992-65551011	MS.gene063610:intron	10.0%
!!	AATATATCATATCTATATTC+AGG	-	chr5.2:65551534-65551553	None:intergenic	15.0%
!!	CAAAATTTATTACAAAAAAC+AGG	-	chr5.2:65551923-65551942	None:intergenic	15.0%
!!	GAAAATAATAAGACATTAAT+AGG	-	chr5.2:65551756-65551775	None:intergenic	15.0%
!!	TGAATATAGATATGATATAT+TGG	+	chr5.2:65551533-65551552	MS.gene063610:CDS	15.0%
!!	TTGGATTTAAAAAATAAAGA+TGG	-	chr5.2:65550423-65550442	None:intergenic	15.0%
!!	TTTAAAAAATAAAGATGGAA+TGG	-	chr5.2:65550418-65550437	None:intergenic	15.0%
!!!	TATTTTTTAAATCCAAACAA+AGG	+	chr5.2:65550427-65550446	MS.gene063610:intron	15.0%
!!!	TTTTGTAATAAATTTTGCAA+GGG	+	chr5.2:65551926-65551945	MS.gene063610:intron	15.0%
!!!	TTTTTGTAATAAATTTTGCA+AGG	+	chr5.2:65551925-65551944	MS.gene063610:intron	15.0%
!!	AAATAAGAGATTTCTTTGTA+AGG	-	chr5.2:65550975-65550994	None:intergenic	20.0%
!!	AGAGTAAAAATAAGTTACAT+CGG	+	chr5.2:65551219-65551238	MS.gene063610:CDS	20.0%
!!!	AATAATAGTACTATGCTTTT+AGG	+	chr5.2:65551465-65551484	MS.gene063610:CDS	20.0%
!!!	ATATCCTTCTTTTTACTTTT+GGG	+	chr5.2:65550747-65550766	MS.gene063610:intron	20.0%
!!!	CAAGTCATTTTAATATTTGA+AGG	+	chr5.2:65550303-65550322	MS.gene063610:intron	20.0%
!!!	CTATTTTTGCATTTGAAAAA+CGG	-	chr5.2:65551824-65551843	None:intergenic	20.0%
!!!	TATATCCTTCTTTTTACTTT+TGG	+	chr5.2:65550746-65550765	MS.gene063610:intron	20.0%
!!!	TCTCAAATCAAATTTTCTTA+TGG	+	chr5.2:65551360-65551379	MS.gene063610:CDS	20.0%
!!!	TTTATTTTAAAAGCATCCAT+GGG	+	chr5.2:65550623-65550642	MS.gene063610:intron	20.0%
!	AAAACCCAAAAGTAAAAAGA+AGG	-	chr5.2:65550754-65550773	None:intergenic	25.0%
!	AAAATGTATGTACTCAATGA+CGG	-	chr5.2:65550883-65550902	None:intergenic	25.0%
!	ATAAAAATTGGGGGAAATAA+TGG	+	chr5.2:65550360-65550379	MS.gene063610:intron	25.0%
!	CTTGAAACATATTGCATATA+TGG	-	chr5.2:65550187-65550206	None:intergenic	25.0%
!	GAAATAAAAGAAAAGGAGAT+AGG	-	chr5.2:65551720-65551739	None:intergenic	25.0%
!	TCTATCATTGATAAATGTGT+TGG	+	chr5.2:65551970-65551989	MS.gene063610:intron	25.0%
!	TGATATAACATTCCTTTGTT+TGG	-	chr5.2:65550442-65550461	None:intergenic	25.0%
!!!	CATTTTAATATTTGAAGGAG+TGG	+	chr5.2:65550308-65550327	MS.gene063610:intron	25.0%
!!!	GTTTATTTTAAAAGCATCCA+TGG	+	chr5.2:65550622-65550641	MS.gene063610:intron	25.0%
!!!	TTACAATGTTTTGAGCTAAT+GGG	-	chr5.2:65551138-65551157	None:intergenic	25.0%
!!!	TTTACAATGTTTTGAGCTAA+TGG	-	chr5.2:65551139-65551158	None:intergenic	25.0%
	AATACCTTTCAGTGTGATAA+TGG	+	chr5.2:65551051-65551070	MS.gene063610:intron	30.0%
	AGAAGATTCTTTACAAGGAT+GGG	+	chr5.2:65552089-65552108	MS.gene063610:CDS	30.0%
	AGATAGATGCTTTACAAATG+AGG	+	chr5.2:65550521-65550540	MS.gene063610:intron	30.0%
	AGATAGCATTAGATTCTCAA+TGG	-	chr5.2:65551163-65551182	None:intergenic	30.0%
	ATAAAAGAAAAGGAGATAGG+AGG	-	chr5.2:65551717-65551736	None:intergenic	30.0%
	ATTGAGAATGATGACCTTTA+TGG	+	chr5.2:65550914-65550933	MS.gene063610:intron	30.0%
	ATTTAATGGTAAGCAACTAG+AGG	+	chr5.2:65552138-65552157	MS.gene063610:CDS	30.0%
	ATTTGGGGGAATAAAAATTG+GGG	+	chr5.2:65550350-65550369	MS.gene063610:intron	30.0%
	CTTAGGATTAAAATAACCCA+TGG	-	chr5.2:65550642-65550661	None:intergenic	30.0%
	GACACTTATATGCTTTACTT+GGG	+	chr5.2:65550667-65550686	MS.gene063610:intron	30.0%
	GATTTGGGGGAATAAAAATT+GGG	+	chr5.2:65550349-65550368	MS.gene063610:intron	30.0%
	GGTTGCTATATCAAAGTTTA+GGG	-	chr5.2:65550811-65550830	None:intergenic	30.0%
	TGACACTTATATGCTTTACT+TGG	+	chr5.2:65550666-65550685	MS.gene063610:intron	30.0%
	TGGTTGCTATATCAAAGTTT+AGG	-	chr5.2:65550812-65550831	None:intergenic	30.0%
!	AATTTTTATTCCCCCAAATC+GGG	-	chr5.2:65550349-65550368	None:intergenic	30.0%
!	ATTTTTATAGTGAGCTTGAC+TGG	+	chr5.2:65552013-65552032	MS.gene063610:CDS	30.0%
!	CAAAAGTATAACCACCATAA+AGG	-	chr5.2:65550931-65550950	None:intergenic	30.0%
!	CAATTTTTATTCCCCCAAAT+CGG	-	chr5.2:65550350-65550369	None:intergenic	30.0%
!!	TTTTGATGATTGACTTCTCT+TGG	-	chr5.2:65552192-65552211	None:intergenic	30.0%
	AAGAACCAACTGGAATCAAA+AGG	-	chr5.2:65551644-65551663	None:intergenic	35.0%
	AGAGATAGCGATTCTACTTA+AGG	+	chr5.2:65550589-65550608	MS.gene063610:intron	35.0%
	ATGACCATTATCACACTGAA+AGG	-	chr5.2:65551058-65551077	None:intergenic	35.0%
	ATGGAATGGAATGAACATTG+AGG	-	chr5.2:65550404-65550423	None:intergenic	35.0%
	CAGCAACGTCTGATATTTAA+TGG	+	chr5.2:65552124-65552143	MS.gene063610:CDS	35.0%
	CATATAAGTGTCAGTCTCTT+AGG	-	chr5.2:65550659-65550678	None:intergenic	35.0%
	CATTAAATATCAGACGTTGC+TGG	-	chr5.2:65552126-65552145	None:intergenic	35.0%
	CTTCTCTTGGATGTTGTAAT+TGG	-	chr5.2:65552179-65552198	None:intergenic	35.0%
	GAAGGAGAAGATTCTTTACA+AGG	+	chr5.2:65552084-65552103	MS.gene063610:CDS	35.0%
	GAGAAGATTCTTTACAAGGA+TGG	+	chr5.2:65552088-65552107	MS.gene063610:CDS	35.0%
	GATTTCCAAACCTAAATTGC+TGG	+	chr5.2:65550064-65550083	MS.gene063610:CDS	35.0%
	TAGCCTCCAAAACATTATAG+CGG	-	chr5.2:65550852-65550871	None:intergenic	35.0%
	TTGGATGTTGTAATTGGCAA+GGG	-	chr5.2:65552173-65552192	None:intergenic	35.0%
	TTTGAGCAATCCAGCAATTT+AGG	-	chr5.2:65550077-65550096	None:intergenic	35.0%
	TTTGGGGGAATAAAAATTGG+GGG	+	chr5.2:65550351-65550370	MS.gene063610:intron	35.0%
!	ATTGGGGGAAATAATGGAAA+AGG	+	chr5.2:65550366-65550385	MS.gene063610:intron	35.0%
!	CGATTTGGGGGAATAAAAAT+TGG	+	chr5.2:65550348-65550367	MS.gene063610:intron	35.0%
!	GATAAATGTGTTGGCAATTG+CGG	+	chr5.2:65551979-65551998	MS.gene063610:intron	35.0%
!	GCTATACCGCTATAATGTTT+TGG	+	chr5.2:65550843-65550862	MS.gene063610:intron	35.0%
!	GTTTTTCGCTTGAAGAACAA+TGG	-	chr5.2:65551424-65551443	None:intergenic	35.0%
!!	ATACCGCTATAATGTTTTGG+AGG	+	chr5.2:65550846-65550865	MS.gene063610:intron	35.0%
	AACACAACCTTAGGGAGAAA+CGG	+	chr5.2:65550498-65550517	MS.gene063610:intron	40.0%
	ACCAATCCAAACACAACCTT+AGG	+	chr5.2:65550489-65550508	MS.gene063610:intron	40.0%
	AGACTTCAAGGAGACAATGA+AGG	-	chr5.2:65551391-65551410	None:intergenic	40.0%
	CAAATGCATACCTGAAAGAC+GGG	-	chr5.2:65550122-65550141	None:intergenic	40.0%
	CCAATCCAAACACAACCTTA+GGG	+	chr5.2:65550490-65550509	MS.gene063610:intron	40.0%
	CTACAACCATGTTCTGCATT+CGG	-	chr5.2:65551201-65551220	None:intergenic	40.0%
	CTTAACTATTCCCGTCTTTC+AGG	+	chr5.2:65550109-65550128	MS.gene063610:CDS	40.0%
	CTTGGATGTTGTAATTGGCA+AGG	-	chr5.2:65552174-65552193	None:intergenic	40.0%
	GAGAATGATGACCTTTATGG+TGG	+	chr5.2:65550917-65550936	MS.gene063610:intron	40.0%
	GCAAATGCATACCTGAAAGA+CGG	-	chr5.2:65550123-65550142	None:intergenic	40.0%
	GCTTGAACTATTAACCCTCA+GGG	-	chr5.2:65552050-65552069	None:intergenic	40.0%
	GGTTTCATCGTTAGACTTCA+AGG	-	chr5.2:65551403-65551422	None:intergenic	40.0%
	GTTCTTCAAGCGAAAAACGA+TGG	+	chr5.2:65551426-65551445	MS.gene063610:CDS	40.0%
	TATAGCGGTATAGCTAGTAG+CGG	-	chr5.2:65550837-65550856	None:intergenic	40.0%
	TATTCAGGCTCAGAAGAGTT+AGG	-	chr5.2:65551519-65551538	None:intergenic	40.0%
	TGCTTGAACTATTAACCCTC+AGG	-	chr5.2:65552051-65552070	None:intergenic	40.0%
	TTTCTCCCTAAGGTTGTGTT+TGG	-	chr5.2:65550498-65550517	None:intergenic	40.0%
!	CATAACTTGCATATACCCCA+TGG	+	chr5.2:65551689-65551708	MS.gene063610:CDS	40.0%
!	GAAATTGCAGTCTTTTGCGA+AGG	+	chr5.2:65551578-65551597	MS.gene063610:CDS	40.0%
!	GCAATCCAGCAATTTAGGTT+TGG	-	chr5.2:65550072-65550091	None:intergenic	40.0%
!	GGGGAAATAATGGAAAAGGA+TGG	+	chr5.2:65550370-65550389	MS.gene063610:intron	40.0%
!	TAAGGTTGTGTTTGGATTGG+TGG	-	chr5.2:65550490-65550509	None:intergenic	40.0%
!	TTTGAGAACCCCTGTGTTTT+CGG	-	chr5.2:65551347-65551366	None:intergenic	40.0%
!!	AGAGCTTTTGAAGAACCAAC+TGG	-	chr5.2:65551654-65551673	None:intergenic	40.0%
!!	GAGTTCCTTTTGATTCCAGT+TGG	+	chr5.2:65551636-65551655	MS.gene063610:CDS	40.0%
!!	TGTGTTTGGATTGGTGGTAT+GGG	-	chr5.2:65550484-65550503	None:intergenic	40.0%
!!	TTGTGTTTGGATTGGTGGTA+TGG	-	chr5.2:65550485-65550504	None:intergenic	40.0%
	AAGCACGATAGTCGATGTGA+AGG	+	chr5.2:65552066-65552085	MS.gene063610:CDS	45.0%
	ACACTTCGCCCTTAAGAAGA+GGG	+	chr5.2:65550239-65550258	MS.gene063610:intron	45.0%
	ACCATTTCAGCCGAAAACAC+AGG	+	chr5.2:65551334-65551353	MS.gene063610:CDS	45.0%
	ACTTGTCCCTGAGTTTAGGA+CGG	-	chr5.2:65551098-65551117	None:intergenic	45.0%
	ATTGCCTAGCCCTCTTCTTA+AGG	-	chr5.2:65550251-65550270	None:intergenic	45.0%
	CATTCCATACCTCCCGATTT+GGG	+	chr5.2:65550334-65550353	MS.gene063610:intron	45.0%
	CATTTCAGCCGAAAACACAG+GGG	+	chr5.2:65551336-65551355	MS.gene063610:CDS	45.0%
	CCATTTCAGCCGAAAACACA+GGG	+	chr5.2:65551335-65551354	MS.gene063610:CDS	45.0%
	CCCTAAGGTTGTGTTTGGAT+TGG	-	chr5.2:65550493-65550512	None:intergenic	45.0%
	CTTAAGGGCGAAGTGTATAG+CGG	-	chr5.2:65550235-65550254	None:intergenic	45.0%
	TACACTTCGCCCTTAAGAAG+AGG	+	chr5.2:65550238-65550257	MS.gene063610:intron	45.0%
	TCATGTCCGAATGCAGAACA+TGG	+	chr5.2:65551192-65551211	MS.gene063610:CDS	45.0%
	TCTATCTCCGTTTCTCCCTA+AGG	-	chr5.2:65550508-65550527	None:intergenic	45.0%
	TGAACTATTAACCCTCAGGG+AGG	-	chr5.2:65552047-65552066	None:intergenic	45.0%
	TGTTGTAATTGGCAAGGGTC+AGG	-	chr5.2:65552168-65552187	None:intergenic	45.0%
	TTAAGAAGAGGGCTAGGCAA+TGG	+	chr5.2:65550250-65550269	MS.gene063610:intron	45.0%
	TTGCCTAGCCCTCTTCTTAA+GGG	-	chr5.2:65550250-65550269	None:intergenic	45.0%
!	ATTCCATACCTCCCGATTTG+GGG	+	chr5.2:65550335-65550354	MS.gene063610:intron	45.0%
!	CAGTTTGCACATCTGAGATC+TGG	-	chr5.2:65551559-65551578	None:intergenic	45.0%
!	GATGTCCAGCGTGTTAGTTT+CGG	+	chr5.2:65551600-65551619	MS.gene063610:CDS	45.0%
!	GCAGTCAATATTTGCTGCCT+TGG	+	chr5.2:65551492-65551511	MS.gene063610:CDS	45.0%
!	GTGTTTTCGGCTGAAATGGT+TGG	-	chr5.2:65551334-65551353	None:intergenic	45.0%
!	TTTTATTCCCCCAAATCGGG+AGG	-	chr5.2:65550346-65550365	None:intergenic	45.0%
!!	AAAGGAGATAGGAGGTACCA+TGG	-	chr5.2:65551709-65551728	None:intergenic	45.0%
!!	AAGGAGATAGGAGGTACCAT+GGG	-	chr5.2:65551708-65551727	None:intergenic	45.0%
!!	TTTGGATTGGTGGTATGGGA+TGG	-	chr5.2:65550480-65550499	None:intergenic	45.0%
	AAAATCGTCCTCCGCCTCAT+TGG	+	chr5.2:65552208-65552227	MS.gene063610:CDS	50.0%
	AAATCGTCCTCCGCCTCATT+GGG	+	chr5.2:65552209-65552228	MS.gene063610:CDS	50.0%
	AGCAAAGCCACAGCCTGAAA+TGG	-	chr5.2:65551292-65551311	None:intergenic	50.0%
	CAAAGCCACAGCCTGAAATG+GGG	-	chr5.2:65551290-65551309	None:intergenic	50.0%
	CCATGTTACTGCCCCATTTC+AGG	+	chr5.2:65551276-65551295	MS.gene063610:CDS	50.0%
	CCATTCCATACCTCCCGATT+TGG	+	chr5.2:65550333-65550352	MS.gene063610:intron	50.0%
	CCTGAAATGGGGCAGTAACA+TGG	-	chr5.2:65551279-65551298	None:intergenic	50.0%
	CGGTATAGCTAGTAGCGGTA+TGG	-	chr5.2:65550832-65550851	None:intergenic	50.0%
	GAGTTCCGAAACTAACACGC+TGG	-	chr5.2:65551608-65551627	None:intergenic	50.0%
	GCAAAGCCACAGCCTGAAAT+GGG	-	chr5.2:65551291-65551310	None:intergenic	50.0%
	GCTCAGAAGAGTTAGGACCA+AGG	-	chr5.2:65551512-65551531	None:intergenic	50.0%
	GGACACTTGTCCCTGAGTTT+AGG	-	chr5.2:65551102-65551121	None:intergenic	50.0%
	TACCTGCCGTCCTAAACTCA+GGG	+	chr5.2:65551089-65551108	MS.gene063610:CDS	50.0%
!	CCAAATCGGGAGGTATGGAA+TGG	-	chr5.2:65550336-65550355	None:intergenic	50.0%
!	CCCTGTGTTTTCGGCTGAAA+TGG	-	chr5.2:65551338-65551357	None:intergenic	50.0%
!	CTAATGGGCAATGAGCACCT+GGG	-	chr5.2:65551123-65551142	None:intergenic	50.0%
!!	AGGAGATAGGAGGTACCATG+GGG	-	chr5.2:65551707-65551726	None:intergenic	50.0%
!!	TGGAAAGAGTACCTCCCTGA+GGG	+	chr5.2:65552033-65552052	MS.gene063610:CDS	50.0%
!!	TTCCATACCTCCCGATTTGG+GGG	+	chr5.2:65550336-65550355	MS.gene063610:intron	50.0%
	AACTCAGGGACAAGTGTCCC+AGG	+	chr5.2:65551103-65551122	MS.gene063610:CDS	55.0%
	ATCAGACGTTGCTGGTGCAC+TGG	-	chr5.2:65552118-65552137	None:intergenic	55.0%
	CTACCTGCCGTCCTAAACTC+AGG	+	chr5.2:65551088-65551107	MS.gene063610:CDS	55.0%
	GTTGGCAATTGCGGTGCAGA+TGG	+	chr5.2:65551988-65552007	MS.gene063610:intron	55.0%
	TACTGCCCCATTTCAGGCTG+TGG	+	chr5.2:65551282-65551301	MS.gene063610:CDS	55.0%
	TCAGACGTTGCTGGTGCACT+GGG	-	chr5.2:65552117-65552136	None:intergenic	55.0%
	TCGCCCTTAAGAAGAGGGCT+AGG	+	chr5.2:65550244-65550263	MS.gene063610:intron	55.0%
	TTCCCCCAAATCGGGAGGTA+TGG	-	chr5.2:65550341-65550360	None:intergenic	55.0%
!	GCTAATGGGCAATGAGCACC+TGG	-	chr5.2:65551124-65551143	None:intergenic	55.0%
!	GGATTGGTGGTATGGGATGG+AGG	-	chr5.2:65550477-65550496	None:intergenic	55.0%
!!	CTGGAAAGAGTACCTCCCTG+AGG	+	chr5.2:65552032-65552051	MS.gene063610:CDS	55.0%
!	GTCCCTGAGTTTAGGACGGC+AGG	-	chr5.2:65551094-65551113	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.2	gene	65550050	65552237	65550050	ID=MS.gene063610
chr5.2	mRNA	65550050	65552237	65550050	ID=MS.gene063610.t1;Parent=MS.gene063610
chr5.2	exon	65550050	65550130	65550050	ID=MS.gene063610.t1.exon1;Parent=MS.gene063610.t1
chr5.2	CDS	65550050	65550130	65550050	ID=cds.MS.gene063610.t1;Parent=MS.gene063610.t1
chr5.2	exon	65551063	65551710	65551063	ID=MS.gene063610.t1.exon2;Parent=MS.gene063610.t1
chr5.2	CDS	65551063	65551710	65551063	ID=cds.MS.gene063610.t1;Parent=MS.gene063610.t1
chr5.2	exon	65552007	65552237	65552007	ID=MS.gene063610.t1.exon3;Parent=MS.gene063610.t1
chr5.2	CDS	65552007	65552237	65552007	ID=cds.MS.gene063610.t1;Parent=MS.gene063610.t1

Gene Sequence

>MS.gene063610

ATGGAGCGTCTGATGATTTCCAAACCTAAATTGCTGGATTGCTCAAAATGTTTTCATCGCTTAACTATTCCCGTCTTTCAGGTATGCATTTGCTTTTCTTTTTTCATTCATAAATAAATGATTTATTACAAGAGCCATATATGCAATATGTTTCAAGTTCTGTATTCAATAATCAATAGCGTCCGCTATACACTTCGCCCTTAAGAAGAGGGCTAGGCAATGGTAGTGAGTGATATTGAAAGAAGAGAGCATACAAGTCATTTTAATATTTGAAGGAGTGGTTCCATTCCATACCTCCCGATTTGGGGGAATAAAAATTGGGGGAAATAATGGAAAAGGATGGAATGCATTCCTCAATGTTCATTCCATTCCATCTTTATTTTTTAAATCCAAACAAAGGAATGTTATATCATTTAATCTCATTCCTCCATCCCATACCACCAATCCAAACACAACCTTAGGGAGAAACGGAGATAGATGCTTTACAAATGAGGTCTAGTAGTGAAGAGAGTGAGCATGACGATGATGAATAAGTTGTTAGAGATAGCGATTCTACTTAAGGAATCACTTTTGTTTATTTTAAAAGCATCCATGGGTTATTTTAATCCTAAGAGACTGACACTTATATGCTTTACTTGGGTTCGAATATTAGTTACAATGAAATTTGATTAACAATTGTGAATGTCTTTAATTTTGTATATCCTTCTTTTTACTTTTGGGTTTTTATATGTGCATCGTATGAACATCTTGTATTGTTGCCCTAAACTTTGATATAGCAACCATACCGCTACTAGCTATACCGCTATAATGTTTTGGAGGCTATTTGCAATCCGTCATTGAGTACATACATTTTGAGAATAATATATTGAGAATGATGACCTTTATGGTGGTTATACTTTTGATTTCATAACTTGCTATCAAGCCTTACAAAGAAATCTCTTATTTTATTTTATTCTAACAAATGGTTCAAAGTCTAATTTGATGATTTTCTTTTATGTTGCAATACCTTTCAGTGTGATAATGGTCATATTGTTTGCTCTACCTGCCGTCCTAAACTCAGGGACAAGTGTCCCAGGTGCTCATTGCCCATTAGCTCAAAACATTGTAAAGCCATTGAGAATCTAATGCTATCTATTGAAATGTCATGTCCGAATGCAGAACATGGTTGTAGAGTAAAAATAAGTTACATCGGAGATCAGAAGCATGAAGACAAATGCATCTACGTACCATGTTACTGCCCCATTTCAGGCTGTGGCTTTGCTGCATCAGCAGAAGTGTTGTCCAACCATTTCAGCCGAAAACACAGGGGTTCTCAAATCAAATTTTCTTATGGTGACTCCTTCATTGTCTCCTTGAAGTCTAACGATGAAACCATTGTTCTTCAAGCGAAAAACGATGGCAAACTATTTATTCTCAATAATAGTACTATGCTTTTAGGAAATGCAGTCAATATTTGCTGCCTTGGTCCTAACTCTTCTGAGCCTGAATATAGATATGATATATTGGCCAGATCTCAGATGTGCAAACTGAAATTGCAGTCTTTTGCGAAGGATGTCCAGCGTGTTAGTTTCGGAACTCTTTCGTCAGAGTTCCTTTTGATTCCAGTTGGTTCTTCAAAAGCTCTCGAGCTAGAAATTTGCATAACTTGCATATACCCCATGGTACCTCCTATCTCCTTTTCTTTTATTTCTTTATTTTTTCTTCCTATTAATGTCTTATTATTTTCTTTTAAGTTTTGAATTTATACTCTAGCGTTTTATGTGAAATTCGTCCGTTTTTCAAATGCAAAAATAGCTTGTTAGTGTACTGTTTTCTATTTTTGTATCAGTCTCAAATTTCTTTTATTGATTTGATCTTGAATTTCTTTTTCCCTGTTTTTTGTAATAAATTTTGCAAGGGTTTTGTTTTCTTTCTGCTGCTTCTATCATTGATAAATGTGTTGGCAATTGCGGTGCAGATGGAAATTTTTATAGTGAGCTTGACTGGAAAGAGTACCTCCCTGAGGGTTAATAGTTCAAGCACGATAGTCGATGTGAAGGAGAAGATTCTTTACAAGGATGGGATCCCAGTGCACCAGCAACGTCTGATATTTAATGGTAAGCAACTAGAGGACAACCTGACCCTTGCCAATTACAACATCCAAGAGAAGTCAATCATCAAAATCGTCCTCCGCCTCATTGGGAGCTAG

Protein sequence

>MS.gene063610.t1

MERLMISKPKLLDCSKCFHRLTIPVFQCDNGHIVCSTCRPKLRDKCPRCSLPISSKHCKAIENLMLSIEMSCPNAEHGCRVKISYIGDQKHEDKCIYVPCYCPISGCGFAASAEVLSNHFSRKHRGSQIKFSYGDSFIVSLKSNDETIVLQAKNDGKLFILNNSTMLLGNAVNICCLGPNSSEPEYRYDILARSQMCKLKLQSFAKDVQRVSFGTLSSEFLLIPVGSSKALELEICITCIYPMMEIFIVSLTGKSTSLRVNSSSTIVDVKEKILYKDGIPVHQQRLIFNGKQLEDNLTLANYNIQEKSIIKIVLRLIGS