AlfalfaGEDB | MS.gene009561

M. sativa cultivar XinJiangDaYe / MS.gene009561

KEGG: K04506
GO: GO:0003674 GO:0005488 GO:0005515 GO:0008270 GO:0043167 GO:0043169 GO:0046872 GO:0046914
PFAM: PF00240.26 PF03145.19

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009561.t1	RHN56826.1	65.7	277	85	1	2	268	62	338	2.60E-95	358.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009561.t1	Q84K34	33.6	214	128	3	2	201	127	340	3.1e-28	127.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009561.t1	G7KFS7	65.7	277	85	1	2	268	99	375	1.9e-95	358.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene009561	MS.gene017316	PPI
MS.gene009561	MS.gene025072	PPI
MS.gene009561	MS.gene063581	PPI
MS.gene009561	MS.gene70750	PPI
MS.gene009561	MS.gene68940	PPI
MS.gene009561	MS.gene92429	PPI
MS.gene009561	MS.gene81807	PPI
MS.gene009561	MS.gene009547	PPI
MS.gene009561	MS.gene063599	PPI
MS.gene009561	MS.gene017308	PPI
MS.gene009561	MS.gene009562	PPI
MS.gene009561	MS.gene26197	PPI
MS.gene009561	MS.gene017300	PPI
MS.gene009561	MS.gene92435	PPI
MS.gene009561	MS.gene063583	PPI
MS.gene009561	MS.gene72920	PPI
MS.gene009561	MS.gene81818	PPI
MS.gene009561	MS.gene26190	PPI
MS.gene009562	MS.gene009561	PPI
MS.gene009561	MS.gene017324	PPI
MS.gene009561	MS.gene063576	PPI
MS.gene009561	MS.gene016802	PPI
MS.gene009561	MS.gene009559	PPI
MS.gene009561	MS.gene063596	PPI
MS.gene009561	MS.gene26202	PPI
MS.gene009561	MS.gene017337	PPI
MS.gene009561	MS.gene032536	PPI
MS.gene009561	MS.gene025074	PPI
MS.gene009561	MS.gene53618	PPI
MS.gene009561	MS.gene017318	PPI
MS.gene009561	MS.gene063598	PPI
MS.gene009561	MS.gene25827	PPI
MS.gene009561	MS.gene017321	PPI
MS.gene009561	MS.gene064974	PPI
MS.gene009561	MS.gene017309	PPI
MS.gene009561	MS.gene062459	PPI
MS.gene009561	MS.gene26198	PPI
MS.gene009561	MS.gene53617	PPI
MS.gene009561	MS.gene009570	PPI
MS.gene009577	MS.gene009561	PPI
MS.gene009561	MS.gene009573	PPI
MS.gene009561	MS.gene37878	PPI
MS.gene009561	MS.gene64288	PPI
MS.gene009561	MS.gene92430	PPI
MS.gene009561	MS.gene063589	PPI
MS.gene009561	MS.gene063603	PPI
MS.gene009561	MS.gene037087	PPI
MS.gene009561	MS.gene73975	PPI
MS.gene017324	MS.gene009561	PPI
MS.gene009561	MS.gene042174	PPI
MS.gene009561	MS.gene94984	PPI
MS.gene009561	MS.gene063584	PPI
MS.gene009561	MS.gene26191	PPI
MS.gene009561	MS.gene26189	PPI
MS.gene009561	MS.gene52735	PPI
MS.gene009561	MS.gene92427	PPI
MS.gene26191	MS.gene009561	PPI
MS.gene063603	MS.gene009561	PPI
MS.gene009561	MS.gene009543	PPI
MS.gene009561	MS.gene92432	PPI
MS.gene009561	MS.gene009566	PPI
MS.gene009561	MS.gene063586	PPI
MS.gene009561	MS.gene017315	PPI
MS.gene009561	MS.gene044969	PPI
MS.gene92435	MS.gene009561	PPI
MS.gene064975	MS.gene009561	PPI
MS.gene009561	MS.gene73973	PPI
MS.gene009561	MS.gene032535	PPI
MS.gene009561	MS.gene017314	PPI
MS.gene73973	MS.gene009561	PPI
MS.gene009561	MS.gene062461	PPI
MS.gene012651	MS.gene009561	PPI
MS.gene009561	MS.gene063587	PPI
MS.gene009561	MS.gene064975	PPI
MS.gene009561	MS.gene063610	PPI
MS.gene009561	MS.gene94985	PPI
MS.gene009561	MS.gene009591	PPI
MS.gene009561	MS.gene062462	PPI
MS.gene009561	MS.gene92433	PPI
MS.gene009561	MS.gene74055	PPI
MS.gene81807	MS.gene009561	PPI
MS.gene009561	MS.gene009564	PPI
MS.gene017309	MS.gene009561	PPI
MS.gene009561	MS.gene81557	PPI
MS.gene009561	MS.gene73977	PPI
MS.gene009561	MS.gene010031	PPI
MS.gene009561	MS.gene009577	PPI
MS.gene009561	MS.gene04692	PPI
MS.gene009561	MS.gene64287	PPI
MS.gene009561	MS.gene39862	PPI
MS.gene37878	MS.gene009561	PPI
MS.gene009561	MS.gene53619	PPI
MS.gene017314	MS.gene009561	PPI
MS.gene009561	MS.gene74054	PPI
MS.gene009561	MS.gene53616	PPI
MS.gene009561	MS.gene009560	PPI
MS.gene009561	MS.gene023735	PPI
MS.gene009561	MS.gene044971	PPI
MS.gene009561	MS.gene044173	PPI
MS.gene009561	MS.gene26186	PPI
MS.gene009561	MS.gene21254	PPI
MS.gene009561	MS.gene053691	PPI
MS.gene26198	MS.gene009561	PPI
MS.gene009561	MS.gene41691	PPI
MS.gene009561	MS.gene61945	PPI
MS.gene009561	MS.gene053692	PPI
MS.gene009561	MS.gene009576	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009561.t1	MTR_5g076720	65.704	277	85	1	2	268	99	375	4.37e-122	354
MS.gene009561.t1	MTR_1g046640	61.011	277	96	2	2	269	28	301	1.36e-111	325
MS.gene009561.t1	MTR_5g067400	60.791	278	96	2	2	269	28	302	2.08e-110	322
MS.gene009561.t1	MTR_2g038430	59.028	288	98	2	2	269	42	329	4.65e-107	314
MS.gene009561.t1	MTR_1g046650	59.206	277	101	2	2	269	28	301	2.74e-106	311
MS.gene009561.t1	MTR_1g046650	59.206	277	101	2	2	269	28	301	3.41e-106	311
MS.gene009561.t1	MTR_1g046650	59.206	277	101	2	2	269	59	332	1.06e-105	311
MS.gene009561.t1	MTR_7g024290	59.857	279	98	3	2	269	28	303	1.68e-105	309
MS.gene009561.t1	MTR_5g076505	56.643	286	113	2	2	276	24	309	1.66e-104	307
MS.gene009561.t1	MTR_2g038420	58.214	280	105	2	2	269	42	321	5.10e-104	306
MS.gene009561.t1	MTR_5g076810	62.016	258	84	3	23	269	2	256	1.46e-103	303
MS.gene009561.t1	MTR_5g076520	57.706	279	107	2	2	269	28	306	3.91e-102	301
MS.gene009561.t1	MTR_5g076370	56.055	289	110	4	2	276	51	336	8.29e-100	296
MS.gene009561.t1	MTR_5g076660	58.007	281	102	3	2	269	50	327	5.81e-99	294
MS.gene009561.t1	MTR_7g094390	56.475	278	108	2	2	269	189	463	1.23e-98	297
MS.gene009561.t1	MTR_5g061290	53.191	282	115	5	2	269	35	313	1.22e-94	282
MS.gene009561.t1	MTR_5g076820	57.430	249	92	4	2	238	36	282	3.16e-87	262
MS.gene009561.t1	MTR_1g046650	55.745	235	92	2	44	269	1	232	3.79e-81	245
MS.gene009561.t1	MTR_5g076540	60.199	201	70	1	2	192	28	228	1.25e-70	218
MS.gene009561.t1	MTR_5g077020	49.528	212	82	6	26	216	16	223	1.95e-52	171
MS.gene009561.t1	MTR_4g094468	41.905	210	111	2	2	201	114	322	9.49e-49	164
MS.gene009561.t1	MTR_4g058025	66.038	106	35	1	54	158	23	128	1.93e-41	141
MS.gene009561.t1	MTR_7g105080	66.129	62	21	0	208	269	1	62	4.09e-21	87.0
MS.gene009561.t1	MTR_3g092130	66.129	62	21	0	208	269	1	62	4.09e-21	87.0
MS.gene009561.t1	MTR_1g059690	66.129	62	21	0	208	269	1	62	4.09e-21	87.0
MS.gene009561.t1	MTR_5g092700	61.429	70	26	1	208	276	1	70	7.49e-21	87.0
MS.gene009561.t1	MTR_4g073580	61.429	70	26	1	208	276	1	70	7.49e-21	87.0
MS.gene009561.t1	MTR_3g092130	66.129	62	21	0	208	269	1	62	1.01e-20	86.3
MS.gene009561.t1	MTR_8g088060	61.429	70	26	1	208	276	1	70	1.38e-20	86.3
MS.gene009561.t1	MTR_5g033960	61.429	70	26	1	208	276	1	70	1.63e-20	86.3
MS.gene009561.t1	MTR_4g073580	61.429	70	26	1	208	276	1	70	1.85e-20	86.7
MS.gene009561.t1	MTR_4g088485	61.429	70	26	1	208	276	1	70	3.20e-20	87.0
MS.gene009561.t1	MTR_4g088485	61.429	70	26	1	208	276	138	207	3.20e-20	87.0
MS.gene009561.t1	MTR_7g116360	61.429	70	26	1	208	276	1	70	3.31e-20	87.0
MS.gene009561.t1	MTR_7g116360	61.429	70	26	1	208	276	77	146	3.31e-20	87.0
MS.gene009561.t1	MTR_7g116360	61.429	70	26	1	208	276	153	222	3.31e-20	87.0
MS.gene009561.t1	MTR_1g066390	61.429	70	26	1	208	276	1	70	3.83e-20	87.0
MS.gene009561.t1	MTR_1g066390	61.429	70	26	1	208	276	77	146	3.83e-20	87.0
MS.gene009561.t1	MTR_1g066390	61.429	70	26	1	208	276	153	222	3.83e-20	87.0
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	1	70	7.43e-20	87.0
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	77	146	7.43e-20	87.0
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	153	222	7.43e-20	87.0
MS.gene009561.t1	MTR_7g116360	59.722	72	28	1	206	276	47	118	8.98e-20	87.0
MS.gene009561.t1	MTR_7g116360	61.429	70	26	1	208	276	125	194	1.00e-19	86.7
MS.gene009561.t1	MTR_7g116360	61.429	70	26	1	208	276	201	270	1.00e-19	86.7
MS.gene009561.t1	MTR_6g061930	61.429	70	26	1	208	276	1	70	1.04e-19	87.0
MS.gene009561.t1	MTR_6g061930	61.429	70	26	1	208	276	77	146	1.04e-19	87.0
MS.gene009561.t1	MTR_6g061930	61.429	70	26	1	208	276	214	283	1.04e-19	87.0
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	1	70	1.10e-19	87.0
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	77	146	1.10e-19	87.0
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	153	222	1.10e-19	87.0
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	229	298	1.10e-19	87.0
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	1	70	1.42e-19	86.3
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	77	146	1.42e-19	86.3
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	153	222	1.42e-19	86.3
MS.gene009561.t1	MTR_4g080920	60.000	70	27	1	208	276	77	146	1.57e-19	85.5
MS.gene009561.t1	MTR_4g080920	60.000	70	27	1	208	276	1	70	3.02e-19	84.7
MS.gene009561.t1	MTR_4g091580	61.429	70	26	1	208	276	305	374	1.68e-19	88.6
MS.gene009561.t1	MTR_4g091580	61.429	70	26	1	208	276	1	70	4.11e-19	87.4
MS.gene009561.t1	MTR_4g091580	61.429	70	26	1	208	276	77	146	4.11e-19	87.4
MS.gene009561.t1	MTR_4g091580	61.429	70	26	1	208	276	153	222	4.11e-19	87.4
MS.gene009561.t1	MTR_4g091580	61.429	70	26	1	208	276	229	298	4.11e-19	87.4
MS.gene009561.t1	MTR_4g091580	61.429	70	26	1	208	276	381	450	4.11e-19	87.4
MS.gene009561.t1	MTR_4g091580	61.429	70	26	1	208	276	457	526	4.11e-19	87.4
MS.gene009561.t1	MTR_4g091580	61.429	70	26	1	208	276	1	70	2.19e-19	87.4
MS.gene009561.t1	MTR_4g091580	61.429	70	26	1	208	276	77	146	2.19e-19	87.4
MS.gene009561.t1	MTR_4g091580	61.429	70	26	1	208	276	153	222	2.19e-19	87.4
MS.gene009561.t1	MTR_4g091580	61.429	70	26	1	208	276	305	374	2.19e-19	87.4
MS.gene009561.t1	MTR_4g091580	60.000	70	27	1	208	276	229	298	6.99e-19	85.9
MS.gene009561.t1	MTR_4g080797	61.429	70	26	1	208	276	1	70	2.26e-19	87.4
MS.gene009561.t1	MTR_4g080797	61.429	70	26	1	208	276	77	146	2.26e-19	87.4
MS.gene009561.t1	MTR_4g080797	61.429	70	26	1	208	276	153	222	2.26e-19	87.4
MS.gene009561.t1	MTR_4g080797	61.429	70	26	1	208	276	229	298	2.26e-19	87.4
MS.gene009561.t1	MTR_4g080797	61.429	70	26	1	208	276	305	374	2.26e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	1	70	2.26e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	77	146	2.26e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	153	222	2.26e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	229	298	2.26e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	305	374	2.26e-19	87.4
MS.gene009561.t1	MTR_8g081020	61.429	70	26	1	208	276	1	70	2.30e-19	87.4
MS.gene009561.t1	MTR_8g081020	61.429	70	26	1	208	276	77	146	2.30e-19	87.4
MS.gene009561.t1	MTR_8g081020	61.429	70	26	1	208	276	153	222	2.30e-19	87.4
MS.gene009561.t1	MTR_8g081020	61.429	70	26	1	208	276	229	298	2.30e-19	87.4
MS.gene009561.t1	MTR_8g081020	61.429	70	26	1	208	276	305	374	2.30e-19	87.4
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	1	70	2.37e-19	87.0
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	77	146	2.37e-19	87.0
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	153	222	2.37e-19	87.0
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	229	298	2.37e-19	87.0
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	305	374	2.37e-19	87.0
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	1	70	3.49e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	77	146	3.49e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	153	222	3.49e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	229	298	3.49e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	305	374	3.49e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	381	450	3.49e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	1	70	3.49e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	77	146	3.49e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	153	222	3.49e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	229	298	3.49e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	305	374	3.49e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	381	450	3.49e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	1	70	4.11e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	77	146	4.11e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	153	222	4.11e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	229	298	4.11e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	305	374	4.11e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	381	450	4.11e-19	87.4
MS.gene009561.t1	MTR_8g018230	61.429	70	26	1	208	276	457	526	4.11e-19	87.4
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	1	70	4.15e-19	87.4
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	77	146	4.15e-19	87.4
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	153	222	4.15e-19	87.4
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	229	298	4.15e-19	87.4
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	305	374	4.15e-19	87.4
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	381	450	4.15e-19	87.4
MS.gene009561.t1	MTR_4g081010	61.429	70	26	1	208	276	457	526	4.15e-19	87.4
MS.gene009561.t1	MTR_4g088495	61.429	70	26	1	208	276	77	146	5.10e-19	87.4
MS.gene009561.t1	MTR_4g088495	61.429	70	26	1	208	276	153	222	5.10e-19	87.4
MS.gene009561.t1	MTR_4g088495	61.429	70	26	1	208	276	229	298	5.10e-19	87.4
MS.gene009561.t1	MTR_4g088495	61.429	70	26	1	208	276	305	374	5.10e-19	87.4
MS.gene009561.t1	MTR_4g088495	61.429	70	26	1	208	276	381	450	5.10e-19	87.4
MS.gene009561.t1	MTR_4g088495	61.429	70	26	1	208	276	457	526	5.10e-19	87.4
MS.gene009561.t1	MTR_4g088495	61.429	70	26	1	208	276	533	602	5.10e-19	87.4
MS.gene009561.t1	MTR_4g088495	61.429	70	26	1	208	276	609	678	5.10e-19	87.4
MS.gene009561.t1	MTR_4g088495	61.429	70	26	1	208	276	685	754	5.10e-19	87.4
MS.gene009561.t1	MTR_4g088495	61.429	70	26	1	208	276	761	830	5.10e-19	87.4
MS.gene009561.t1	MTR_4g088495	60.000	70	27	1	208	276	1	70	8.49e-18	83.6
MS.gene009561.t1	MTR_8g479250	56.410	78	33	1	200	276	133	210	1.74e-15	75.5
MS.gene009561.t1	MTR_3g017590	33.000	100	55	2	2	89	70	169	2.11e-14	72.4
MS.gene009561.t1	MTR_1g054335	30.387	181	104	6	2	160	75	255	1.34e-13	70.1
MS.gene009561.t1	MTR_8g038370	33.000	100	55	2	2	89	129	228	2.40e-13	69.7
MS.gene009561.t1	MTR_5g061310	45.714	70	37	1	208	276	2	71	3.58e-13	63.9
MS.gene009561.t1	MTR_7g085590	27.568	185	109	5	2	172	80	253	1.49e-12	67.0
MS.gene009561.t1	MTR_7g093600	29.282	181	106	6	2	160	76	256	1.60e-12	67.0
MS.gene009561.t1	MTR_8g027520	35.000	100	53	2	2	89	70	169	2.45e-12	66.6
MS.gene009561.t1	MTR_8g027520	35.000	100	53	2	2	89	61	160	2.93e-12	66.2
MS.gene009561.t1	MTR_3g091510	34.000	100	54	2	2	89	77	176	3.21e-12	66.2
MS.gene009561.t1	MTR_1g008120	34.000	100	54	2	2	89	85	184	1.52e-11	64.3
MS.gene009561.t1	MTR_7g117415	35.354	99	52	2	2	88	78	176	2.33e-11	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009561.t1	AT5G37930	33.023	215	130	3	1	201	126	340	2.71e-32	122
MS.gene009561.t1	AT1G66650	28.829	222	135	7	2	201	100	320	1.67e-21	92.8
MS.gene009561.t1	AT5G37870	28.713	202	129	5	2	188	59	260	1.93e-21	91.7
MS.gene009561.t1	AT3G52590	66.129	62	21	0	208	269	1	62	6.12e-21	86.7
MS.gene009561.t1	AT2G36170	66.129	62	21	0	208	269	1	62	6.12e-21	86.7
MS.gene009561.t1	AT4G05050	61.429	70	26	1	208	276	1	70	7.22e-21	87.0
MS.gene009561.t1	AT4G05050	61.429	70	26	1	208	276	77	146	7.22e-21	87.0
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	1	70	7.22e-21	87.0
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	77	146	7.22e-21	87.0
MS.gene009561.t1	AT2G35635	61.429	70	26	1	208	276	1	70	9.40e-21	86.7
MS.gene009561.t1	AT1G66620	27.523	218	139	4	2	201	58	274	9.97e-21	90.1
MS.gene009561.t1	AT1G31340	61.429	70	26	1	208	276	1	70	1.10e-20	86.7
MS.gene009561.t1	AT1G23410	61.429	70	26	1	208	276	1	70	1.23e-20	86.7
MS.gene009561.t1	AT1G55060	62.857	70	25	1	208	276	77	146	1.27e-20	88.2
MS.gene009561.t1	AT1G55060	59.677	62	25	0	208	269	1	62	1.10e-17	80.5
MS.gene009561.t1	AT1G55060	58.571	70	28	1	208	276	153	222	1.33e-17	80.1
MS.gene009561.t1	AT2G47110	61.429	70	26	1	208	276	1	70	1.37e-20	86.3
MS.gene009561.t1	AT2G47110	61.429	70	26	1	208	276	1	70	1.37e-20	86.3
MS.gene009561.t1	AT3G62250	61.429	70	26	1	208	276	1	70	1.54e-20	86.3
MS.gene009561.t1	AT4G05050	61.429	70	26	1	208	276	1	70	3.46e-20	87.0
MS.gene009561.t1	AT4G05050	61.429	70	26	1	208	276	77	146	3.46e-20	87.0
MS.gene009561.t1	AT4G05050	61.429	70	26	1	208	276	153	222	3.46e-20	87.0
MS.gene009561.t1	AT4G05050	61.429	70	26	1	208	276	1	70	3.46e-20	87.0
MS.gene009561.t1	AT4G05050	61.429	70	26	1	208	276	77	146	3.46e-20	87.0
MS.gene009561.t1	AT4G05050	61.429	70	26	1	208	276	153	222	3.46e-20	87.0
MS.gene009561.t1	AT4G05050	61.429	70	26	1	208	276	1	70	3.46e-20	87.0
MS.gene009561.t1	AT4G05050	61.429	70	26	1	208	276	77	146	3.46e-20	87.0
MS.gene009561.t1	AT4G05050	61.429	70	26	1	208	276	153	222	3.46e-20	87.0
MS.gene009561.t1	AT4G02890	61.429	70	26	1	208	276	1	70	3.46e-20	87.0
MS.gene009561.t1	AT4G02890	61.429	70	26	1	208	276	77	146	3.46e-20	87.0
MS.gene009561.t1	AT4G02890	61.429	70	26	1	208	276	153	222	3.46e-20	87.0
MS.gene009561.t1	AT4G02890	61.429	70	26	1	208	276	1	70	3.46e-20	87.0
MS.gene009561.t1	AT4G02890	61.429	70	26	1	208	276	77	146	3.46e-20	87.0
MS.gene009561.t1	AT4G02890	61.429	70	26	1	208	276	153	222	3.46e-20	87.0
MS.gene009561.t1	AT5G37890	40.000	100	50	1	2	91	65	164	4.13e-20	88.2
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	1	70	1.12e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	77	146	1.12e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	153	222	1.12e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	229	298	1.12e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	1	70	1.12e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	77	146	1.12e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	153	222	1.12e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	229	298	1.12e-19	87.4
MS.gene009561.t1	AT4G02890	61.429	70	26	1	208	276	1	70	1.12e-19	87.4
MS.gene009561.t1	AT4G02890	61.429	70	26	1	208	276	77	146	1.12e-19	87.4
MS.gene009561.t1	AT4G02890	61.429	70	26	1	208	276	153	222	1.12e-19	87.4
MS.gene009561.t1	AT4G02890	61.429	70	26	1	208	276	229	298	1.12e-19	87.4
MS.gene009561.t1	AT4G02890	61.429	70	26	1	208	276	1	70	1.12e-19	87.4
MS.gene009561.t1	AT4G02890	61.429	70	26	1	208	276	77	146	1.12e-19	87.4
MS.gene009561.t1	AT4G02890	61.429	70	26	1	208	276	153	222	1.12e-19	87.4
MS.gene009561.t1	AT4G02890	61.429	70	26	1	208	276	229	298	1.12e-19	87.4
MS.gene009561.t1	AT5G03240	61.429	70	26	1	208	276	1	70	1.12e-19	87.4
MS.gene009561.t1	AT5G03240	61.429	70	26	1	208	276	77	146	1.12e-19	87.4
MS.gene009561.t1	AT5G03240	61.429	70	26	1	208	276	153	222	1.12e-19	87.4
MS.gene009561.t1	AT5G03240	61.429	70	26	1	208	276	229	298	1.12e-19	87.4
MS.gene009561.t1	AT5G03240	61.429	70	26	1	208	276	1	70	1.12e-19	87.4
MS.gene009561.t1	AT5G03240	61.429	70	26	1	208	276	77	146	1.12e-19	87.4
MS.gene009561.t1	AT5G03240	61.429	70	26	1	208	276	153	222	1.12e-19	87.4
MS.gene009561.t1	AT5G03240	61.429	70	26	1	208	276	229	298	1.12e-19	87.4
MS.gene009561.t1	AT5G03240	61.429	70	26	1	208	276	1	70	1.12e-19	87.4
MS.gene009561.t1	AT5G03240	61.429	70	26	1	208	276	77	146	1.12e-19	87.4
MS.gene009561.t1	AT5G03240	61.429	70	26	1	208	276	153	222	1.12e-19	87.4
MS.gene009561.t1	AT5G03240	61.429	70	26	1	208	276	229	298	1.12e-19	87.4
MS.gene009561.t1	AT5G20620	61.429	70	26	1	208	276	1	70	1.12e-19	87.4
MS.gene009561.t1	AT5G20620	61.429	70	26	1	208	276	77	146	1.12e-19	87.4
MS.gene009561.t1	AT5G20620	61.429	70	26	1	208	276	153	222	1.12e-19	87.4
MS.gene009561.t1	AT5G20620	61.429	70	26	1	208	276	229	298	1.12e-19	87.4
MS.gene009561.t1	AT1G65350	61.429	70	26	1	208	276	1	70	1.42e-19	87.0
MS.gene009561.t1	AT1G65350	61.429	70	26	1	208	276	152	221	3.79e-19	85.9
MS.gene009561.t1	AT1G65350	60.000	70	26	2	208	276	77	145	7.34e-17	79.7
MS.gene009561.t1	AT1G65350	46.429	84	30	2	208	276	228	311	3.85e-11	63.2
MS.gene009561.t1	AT5G20620	61.429	70	26	1	208	276	1	70	2.27e-19	87.4
MS.gene009561.t1	AT5G20620	61.429	70	26	1	208	276	77	146	2.27e-19	87.4
MS.gene009561.t1	AT5G20620	61.429	70	26	1	208	276	153	222	2.27e-19	87.4
MS.gene009561.t1	AT5G20620	61.429	70	26	1	208	276	229	298	2.27e-19	87.4
MS.gene009561.t1	AT5G20620	61.429	70	26	1	208	276	305	374	2.27e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	1	70	2.37e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	77	146	2.37e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	153	222	2.37e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	229	298	2.37e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	305	374	2.37e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	1	70	2.37e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	77	146	2.37e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	153	222	2.37e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	229	298	2.37e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	305	374	2.37e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	1	70	2.37e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	77	146	2.37e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	153	222	2.37e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	229	298	2.37e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	305	374	2.37e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	1	70	3.66e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	77	146	3.66e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	153	222	3.66e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	229	298	3.66e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	305	374	3.66e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	381	450	3.66e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	1	70	3.66e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	77	146	3.66e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	153	222	3.66e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	229	298	3.66e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	305	374	3.66e-19	87.4
MS.gene009561.t1	AT4G05320	61.429	70	26	1	208	276	381	450	3.66e-19	87.4
MS.gene009561.t1	AT5G37910	28.155	206	126	6	2	188	52	254	4.51e-19	85.1
MS.gene009561.t1	AT1G66630	30.244	205	126	4	2	189	63	267	8.62e-19	84.7
MS.gene009561.t1	AT5G37640	58.571	70	28	1	208	276	79	148	1.11e-18	84.7
MS.gene009561.t1	AT5G37640	57.143	70	29	1	208	276	155	224	9.46e-17	79.3
MS.gene009561.t1	AT5G37640	53.125	64	30	0	206	269	1	64	1.13e-13	70.5
MS.gene009561.t1	AT5G37640	54.930	71	30	2	208	276	231	301	1.22e-13	70.5
MS.gene009561.t1	AT1G66660	28.054	221	139	6	2	202	120	340	3.45e-18	83.6
MS.gene009561.t1	AT3G09790	58.571	70	28	1	208	276	79	148	5.66e-17	81.3
MS.gene009561.t1	AT3G09790	51.389	72	34	1	206	276	1	72	2.07e-14	73.6
MS.gene009561.t1	AT3G09790	50.820	61	30	0	208	268	552	612	3.54e-11	63.9
MS.gene009561.t1	AT3G09790	52.239	67	27	1	208	269	238	304	5.30e-11	63.2
MS.gene009561.t1	AT3G09790	58.571	70	28	1	208	276	79	148	5.66e-17	81.3
MS.gene009561.t1	AT3G09790	51.389	72	34	1	206	276	1	72	2.07e-14	73.6
MS.gene009561.t1	AT3G09790	50.820	61	30	0	208	268	552	612	3.54e-11	63.9
MS.gene009561.t1	AT3G09790	52.239	67	27	1	208	269	238	304	5.30e-11	63.2
MS.gene009561.t1	AT1G53930	39.474	114	53	2	165	269	41	147	4.86e-15	71.6
MS.gene009561.t1	AT2G41980	28.261	230	134	10	2	202	71	298	3.91e-13	68.6
MS.gene009561.t1	AT3G58040	27.826	230	135	10	2	202	74	301	5.75e-13	68.2
MS.gene009561.t1	AT3G58040	27.826	230	135	10	2	202	74	301	5.75e-13	68.2
MS.gene009561.t1	AT5G62800	36.364	99	51	2	2	88	57	155	1.65e-12	67.4
MS.gene009561.t1	AT4G27880	35.000	100	53	2	2	89	78	177	1.75e-12	67.0
MS.gene009561.t1	AT5G62800	36.364	99	51	2	2	88	57	155	1.86e-12	67.0
MS.gene009561.t1	AT1G53950	34.646	127	77	3	160	280	15	141	6.23e-12	62.4
MS.gene009561.t1	AT3G61790	33.000	100	55	2	2	89	77	176	8.41e-12	65.1
MS.gene009561.t1	AT3G58040	33.000	100	55	2	2	89	74	173	1.48e-11	63.2

Find 45 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTTTCATCATTAGACTTTA+AGG	0.133843	5.3:-62159628	None:intergenic
TGACACTTGTTCCGAAGTTT+AGG	0.239520	5.3:-62159357	None:intergenic
GTCTGAACTATTAACCTTAA+TGG	0.269313	5.3:-62160167	None:intergenic
AATAACAGTACTACGCATTT+AGG	0.272738	5.3:+62159693	MS.gene009561:CDS
ATATCGATCAAATGATTCTT+TGG	0.282871	5.3:-62160687	None:intergenic
CAGATGGAACTATTTGTTAA+AGG	0.290703	5.3:+62160124	MS.gene009561:intron
CATAACTTGTGTAACCTTAA+CGG	0.321513	5.3:+62159917	MS.gene009561:CDS
TTTCGAATCAAATTCTGTTA+TGG	0.345723	5.3:+62159588	MS.gene009561:CDS
TCATGTCCGAATAGAAAATA+TGG	0.370393	5.3:+62159450	MS.gene009561:CDS
CTGTGTTGTCTAATCATTTG+AGG	0.372472	5.3:+62159550	MS.gene009561:CDS
TGAAACCATTGTTCTTTATG+AGG	0.374716	5.3:+62159644	MS.gene009561:CDS
TGGAGAGACGATGACCATTA+AGG	0.386637	5.3:+62160153	MS.gene009561:CDS
GAGCTCATTGTGATTCCATT+TGG	0.388505	5.3:+62159864	MS.gene009561:CDS
GCCCAACGTCTGATCTTTGC+TGG	0.416724	5.3:+62160244	MS.gene009561:CDS
GACACTTGTTCCGAAGTTTA+GGG	0.419221	5.3:-62159356	None:intergenic
AACAAAGCCACAACCTGAAA+AGG	0.430675	5.3:-62159517	None:intergenic
TGAGTATCGGTATGATATAC+TGG	0.434364	5.3:+62159761	MS.gene009561:CDS
TGTTATAATCTGCAAGGGTC+CGG	0.465085	5.3:-62160285	None:intergenic
GGAACTATTTGTTAAAGGCC+TGG	0.468289	5.3:+62160129	MS.gene009561:CDS
ACCAGCAAAGATCAGACGTT+GGG	0.482089	5.3:-62160245	None:intergenic
CTATTTGTTAAAGGCCTGGA+TGG	0.486085	5.3:+62160133	MS.gene009561:CDS
TGCAACTTTGATCAAAATGC+TGG	0.488732	5.3:+62159732	MS.gene009561:CDS
GTTGCAATATAGTGTGGTAA+TGG	0.494969	5.3:+62159309	MS.gene009561:intron
ATCAGACGTTGGGCGTGCAC+TGG	0.502558	5.3:-62160235	None:intergenic
ATGCTGGTTGGTTTGAGTAT+CGG	0.504476	5.3:+62159748	MS.gene009561:CDS
TAGTGTGAAGAGTGTCCAAC+GGG	0.509040	5.3:+62159818	MS.gene009561:CDS
TGGTCATCGTCTCTCCATCC+AGG	0.518928	5.3:-62160147	None:intergenic
GGATATGGGAGGTACCGTTA+AGG	0.521261	5.3:-62159931	None:intergenic
CTGTTATGGTAAATCATTCG+TGG	0.522316	5.3:+62159602	MS.gene009561:CDS
ACAAAGCCACAACCTGAAAA+GGG	0.530707	5.3:-62159516	None:intergenic
AGATATTTAGAAGAACCAAA+TGG	0.532452	5.3:-62159879	None:intergenic
CTATCTGCTGCCCTAAACTT+CGG	0.545837	5.3:+62159346	MS.gene009561:CDS
CTTGGATGTTATAATCTGCA+AGG	0.566316	5.3:-62160291	None:intergenic
GTAAACAACTAGAGGACGGC+CGG	0.570225	5.3:+62160266	MS.gene009561:CDS
CTTGCAGATTATAACATCCA+AGG	0.577951	5.3:+62160292	MS.gene009561:CDS
CCTGAAAAGGGACAGTAACA+TGG	0.591203	5.3:-62159504	None:intergenic
GTTCTTTATGAGGAAAACGA+TGG	0.599281	5.3:+62159654	MS.gene009561:CDS
CTTTGCTGGTAAACAACTAG+AGG	0.614990	5.3:+62160258	MS.gene009561:CDS
ACTTTGATCAAAATGCTGGT+TGG	0.627593	5.3:+62159736	MS.gene009561:CDS
CTAGTGTGAAGAGTGTCCAA+CGG	0.627905	5.3:+62159817	MS.gene009561:CDS
TTGGATGTTATAATCTGCAA+GGG	0.630739	5.3:-62160290	None:intergenic
TACCAGCAAAGATCAGACGT+TGG	0.643195	5.3:-62160246	None:intergenic
AGACTGCAATAGATTCTCGA+AGG	0.658419	5.3:-62159418	None:intergenic
GCTGGTAAACAACTAGAGGA+CGG	0.660596	5.3:+62160262	MS.gene009561:CDS
TAAGGTTAATAGTTCAGACA+TGG	0.664032	5.3:+62160171	MS.gene009561:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAAAATAATAAGACTTTAAT+AGG	-	chr5.3:62159979-62159998	None:intergenic	10.0%
!!!	ATTTTCTTTTATTGATATAA+TGG	+	chr5.3:62160090-62160109	MS.gene009561:intron	10.0%
!!!	ATATGTCTTATCATATTTTA+TGG	+	chr5.3:62159239-62159258	MS.gene009561:intron	15.0%
!!!	TATACTGATTATTTTTTACT+GGG	+	chr5.3:62160546-62160565	MS.gene009561:intron	15.0%
!!!	TGATAAGACATATTTTTATA+AGG	-	chr5.3:62159232-62159251	None:intergenic	15.0%
!!	AAATAACCAATGCAAATAAA+AGG	-	chr5.3:62159955-62159974	None:intergenic	20.0%
!!!	GTATACTGATTATTTTTTAC+TGG	+	chr5.3:62160545-62160564	MS.gene009561:intron	20.0%
!	AGATATTTAGAAGAACCAAA+TGG	-	chr5.3:62159882-62159901	None:intergenic	25.0%
!	AGTGATTGTATTCATGATAA+GGG	-	chr5.3:62160438-62160457	None:intergenic	25.0%
!	ATATCGATCAAATGATTCTT+TGG	-	chr5.3:62160690-62160709	None:intergenic	25.0%
!	CAATGCAAATAAAAGGATAT+GGG	-	chr5.3:62159948-62159967	None:intergenic	25.0%
!	TATTGATATAATGGCAATTG+TGG	+	chr5.3:62160099-62160118	MS.gene009561:intron	25.0%
!	TTTCGAATCAAATTCTGTTA+TGG	+	chr5.3:62159588-62159607	MS.gene009561:CDS	25.0%
!!	CAAAAGTATAACCAACATAA+AGG	-	chr5.3:62159188-62159207	None:intergenic	25.0%
!!	GAGATGATTTTTAACAATTG+AGG	+	chr5.3:62160568-62160587	MS.gene009561:intron	25.0%
!!	TTGCAACCATATTTTCTATT+CGG	-	chr5.3:62159459-62159478	None:intergenic	25.0%
!!!	TTTTTTGTTGCAATATAGTG+TGG	+	chr5.3:62159303-62159322	MS.gene009561:intron	25.0%
	AATAACAGTACTACGCATTT+AGG	+	chr5.3:62159693-62159712	MS.gene009561:CDS	30.0%
	CCAATGCAAATAAAAGGATA+TGG	-	chr5.3:62159949-62159968	None:intergenic	30.0%
	GAGTGATTGTATTCATGATA+AGG	-	chr5.3:62160439-62160458	None:intergenic	30.0%
	GGTTTCATCATTAGACTTTA+AGG	-	chr5.3:62159631-62159650	None:intergenic	30.0%
	GTCTGAACTATTAACCTTAA+TGG	-	chr5.3:62160170-62160189	None:intergenic	30.0%
	TAAGGTTAATAGTTCAGACA+TGG	+	chr5.3:62160171-62160190	MS.gene009561:CDS	30.0%
	TAGAATGACTACCTTTATGT+TGG	+	chr5.3:62159174-62159193	MS.gene009561:intron	30.0%
	TCATGTCCGAATAGAAAATA+TGG	+	chr5.3:62159450-62159469	MS.gene009561:CDS	30.0%
	TGAAACCATTGTTCTTTATG+AGG	+	chr5.3:62159644-62159663	MS.gene009561:CDS	30.0%
	TTGGATGTTATAATCTGCAA+GGG	-	chr5.3:62160293-62160312	None:intergenic	30.0%
!	CAGATGGAACTATTTGTTAA+AGG	+	chr5.3:62160124-62160143	MS.gene009561:intron	30.0%
!	CATAACTTGTGTAACCTTAA+CGG	+	chr5.3:62159917-62159936	MS.gene009561:CDS	30.0%
!	GTTTTCCTCATAAAGAACAA+TGG	-	chr5.3:62159652-62159671	None:intergenic	30.0%
!!	CCATATCCTTTTATTTGCAT+TGG	+	chr5.3:62159946-62159965	MS.gene009561:intron	30.0%
!!	TTTACAACGTTTTGAGCTAA+TGG	-	chr5.3:62159397-62159416	None:intergenic	30.0%
	ACTTTGATCAAAATGCTGGT+TGG	+	chr5.3:62159736-62159755	MS.gene009561:CDS	35.0%
	CTGTGTTGTCTAATCATTTG+AGG	+	chr5.3:62159550-62159569	MS.gene009561:CDS	35.0%
	CTGTTATGGTAAATCATTCG+TGG	+	chr5.3:62159602-62159621	MS.gene009561:CDS	35.0%
	CTTGCAGATTATAACATCCA+AGG	+	chr5.3:62160292-62160311	MS.gene009561:CDS	35.0%
	CTTGGATGTTATAATCTGCA+AGG	-	chr5.3:62160294-62160313	None:intergenic	35.0%
	GTTCTTTATGAGGAAAACGA+TGG	+	chr5.3:62159654-62159673	MS.gene009561:CDS	35.0%
	GTTGCAATATAGTGTGGTAA+TGG	+	chr5.3:62159309-62159328	MS.gene009561:intron	35.0%
	TCAGTAATTCTGACATAGAG+TGG	+	chr5.3:62160626-62160645	MS.gene009561:intron	35.0%
	TGCAAATAAAAGGATATGGG+AGG	-	chr5.3:62159945-62159964	None:intergenic	35.0%
	TGCAACTTTGATCAAAATGC+TGG	+	chr5.3:62159732-62159751	MS.gene009561:CDS	35.0%
	TTTCAATCAGACAATAGAGC+AGG	-	chr5.3:62160654-62160673	None:intergenic	35.0%
!!	TGAGTATCGGTATGATATAC+TGG	+	chr5.3:62159761-62159780	MS.gene009561:CDS	35.0%
!!!	GATTTTCTAAAGTAACCCGT+TGG	-	chr5.3:62159836-62159855	None:intergenic	35.0%
	AACAAAGCCACAACCTGAAA+AGG	-	chr5.3:62159520-62159539	None:intergenic	40.0%
	ACAAAGCCACAACCTGAAAA+GGG	-	chr5.3:62159519-62159538	None:intergenic	40.0%
	AGACTGCAATAGATTCTCGA+AGG	-	chr5.3:62159421-62159440	None:intergenic	40.0%
	CTTTGCTGGTAAACAACTAG+AGG	+	chr5.3:62160258-62160277	MS.gene009561:CDS	40.0%
	GACACTTGTTCCGAAGTTTA+GGG	-	chr5.3:62159359-62159378	None:intergenic	40.0%
	GAGCTCATTGTGATTCCATT+TGG	+	chr5.3:62159864-62159883	MS.gene009561:CDS	40.0%
	TGACACTTGTTCCGAAGTTT+AGG	-	chr5.3:62159360-62159379	None:intergenic	40.0%
	TGTTATAATCTGCAAGGGTC+CGG	-	chr5.3:62160288-62160307	None:intergenic	40.0%
	TTCATGATAAGGGTCACCAA+CGG	-	chr5.3:62160428-62160447	None:intergenic	40.0%
!	CTATTTGTTAAAGGCCTGGA+TGG	+	chr5.3:62160133-62160152	MS.gene009561:CDS	40.0%
!	GGAACTATTTGTTAAAGGCC+TGG	+	chr5.3:62160129-62160148	MS.gene009561:CDS	40.0%
!!	ATGCTGGTTGGTTTGAGTAT+CGG	+	chr5.3:62159748-62159767	MS.gene009561:CDS	40.0%
	AATGGCAATTGTGGAGCAGA+TGG	+	chr5.3:62160108-62160127	MS.gene009561:intron	45.0%
	ACCAGCAAAGATCAGACGTT+GGG	-	chr5.3:62160248-62160267	None:intergenic	45.0%
	CCTGAAAAGGGACAGTAACA+TGG	-	chr5.3:62159507-62159526	None:intergenic	45.0%
	CTATCTGCTGCCCTAAACTT+CGG	+	chr5.3:62159346-62159365	MS.gene009561:CDS	45.0%
	CTTCTACGTAGTAATCAGCG+AGG	-	chr5.3:62160374-62160393	None:intergenic	45.0%
	GCTGGTAAACAACTAGAGGA+CGG	+	chr5.3:62160262-62160281	MS.gene009561:CDS	45.0%
	TACCAGCAAAGATCAGACGT+TGG	-	chr5.3:62160249-62160268	None:intergenic	45.0%
	TGGAGAGACGATGACCATTA+AGG	+	chr5.3:62160153-62160172	MS.gene009561:CDS	45.0%
!	CCATGTTACTGTCCCTTTTC+AGG	+	chr5.3:62159504-62159523	MS.gene009561:CDS	45.0%
!!	CTAGTGTGAAGAGTGTCCAA+CGG	+	chr5.3:62159817-62159836	MS.gene009561:CDS	45.0%
!!	TAGTGTGAAGAGTGTCCAAC+GGG	+	chr5.3:62159818-62159837	MS.gene009561:CDS	45.0%
!!!	TACTGTCCCTTTTCAGGTTG+TGG	+	chr5.3:62159510-62159529	MS.gene009561:CDS	45.0%
	AGTAATCAGCGAGGATGTGG+TGG	-	chr5.3:62160365-62160384	None:intergenic	50.0%
	ATGATAAGGGTCACCAACGG+TGG	-	chr5.3:62160425-62160444	None:intergenic	50.0%
	CGTAGTAATCAGCGAGGATG+TGG	-	chr5.3:62160368-62160387	None:intergenic	50.0%
	GTAAACAACTAGAGGACGGC+CGG	+	chr5.3:62160266-62160285	MS.gene009561:CDS	50.0%
!!	GGATATGGGAGGTACCGTTA+AGG	-	chr5.3:62159934-62159953	None:intergenic	50.0%
	AACGGTGGCAAACGATGAGG+TGG	-	chr5.3:62160410-62160429	None:intergenic	55.0%
	ACCAACGGTGGCAAACGATG+AGG	-	chr5.3:62160413-62160432	None:intergenic	55.0%
	ACCTCATCGTTTGCCACCGT+TGG	+	chr5.3:62160409-62160428	MS.gene009561:intron	55.0%
	CGTGGATGGTTGACGAACCT+TGG	-	chr5.3:62160312-62160331	None:intergenic	55.0%
	GCCCAACGTCTGATCTTTGC+TGG	+	chr5.3:62160244-62160263	MS.gene009561:CDS	55.0%
	TCTTCTAGTCCCCAAGGAGG+CGG	-	chr5.3:62160342-62160361	None:intergenic	55.0%
	TGGTCATCGTCTCTCCATCC+AGG	-	chr5.3:62160150-62160169	None:intergenic	55.0%
	TGGTCTTCTAGTCCCCAAGG+AGG	-	chr5.3:62160345-62160364	None:intergenic	55.0%
	TGGTGGTCTTCTAGTCCCCA+AGG	-	chr5.3:62160348-62160367	None:intergenic	55.0%
	ATCAGACGTTGGGCGTGCAC+TGG	-	chr5.3:62160238-62160257	None:intergenic	60.0%
	ACGTCCTCCTCCGCCTCCTT+GGG	+	chr5.3:62160329-62160348	MS.gene009561:intron	65.0%
	TCTAGTCCCCAAGGAGGCGG+AGG	-	chr5.3:62160339-62160358	None:intergenic	65.0%
	AGTCCCCAAGGAGGCGGAGG+AGG	-	chr5.3:62160336-62160355	None:intergenic	70.0%
	CAAGGAGGCGGAGGAGGACG+TGG	-	chr5.3:62160330-62160349	None:intergenic	70.0%
	CACGTCCTCCTCCGCCTCCT+TGG	+	chr5.3:62160328-62160347	MS.gene009561:intron	70.0%
	CGTCCTCCTCCGCCTCCTTG+GGG	+	chr5.3:62160330-62160349	MS.gene009561:intron	70.0%
	GAGGCGGAGGAGGACGTGGA+TGG	-	chr5.3:62160326-62160345	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.3	gene	62159118	62160725	62159118	ID=MS.gene009561
chr5.3	mRNA	62159118	62160725	62159118	ID=MS.gene009561.t1;Parent=MS.gene009561
chr5.3	exon	62159118	62159120	62159118	ID=MS.gene009561.t1.exon1;Parent=MS.gene009561.t1
chr5.3	CDS	62159118	62159120	62159118	ID=cds.MS.gene009561.t1;Parent=MS.gene009561.t1
chr5.3	exon	62159321	62159938	62159321	ID=MS.gene009561.t1.exon2;Parent=MS.gene009561.t1
chr5.3	CDS	62159321	62159938	62159321	ID=cds.MS.gene009561.t1;Parent=MS.gene009561.t1
chr5.3	exon	62160127	62160313	62160127	ID=MS.gene009561.t1.exon3;Parent=MS.gene009561.t1
chr5.3	CDS	62160127	62160313	62160127	ID=cds.MS.gene009561.t1;Parent=MS.gene009561.t1
chr5.3	exon	62160685	62160725	62160685	ID=MS.gene009561.t1.exon4;Parent=MS.gene009561.t1
chr5.3	CDS	62160685	62160725	62160685	ID=cds.MS.gene009561.t1;Parent=MS.gene009561.t1

Gene Sequence

>MS.gene009561

ATGGTATGAACTTTGTAGTCTGTGATTGAGAACATAGATTTTGAGAAGAATAAACTTAGAATGACTACCTTTATGTTGGTTATACTTTTGATTGCATAACTTGCTGACAAGCCTTATAAAAATATGTCTTATCATATTTTATGGTATTCTAGCAATTAGTTTAAAGTCTAATCTGATGATTTACTTTTTTTGTTGCAATATAGTGTGGTAATGGTCATATTGTTTGCTCTATCTGCTGCCCTAAACTTCGGAACAAGTGTCACAAGTGCTCATTGTCCATTAGCTCAAAACGTTGTAAAGCCTTCGAGAATCTATTGCAGTCTATCGAAGTGTCATGTCCGAATAGAAAATATGGTTGCAAGCATGAAGAAAAATGCATCTATAAGCCATGTTACTGTCCCTTTTCAGGTTGTGGCTTTGTTGCAAATGATACTGTGTTGTCTAATCATTTGAGGTTTGAACACAGAGATTTTCGAATCAAATTCTGTTATGGTAAATCATTCGTGGTCTCCTTAAAGTCTAATGATGAAACCATTGTTCTTTATGAGGAAAACGATGGCAAACAATTTATTCTCAATAACAGTACTACGCATTTAGGAAATGCAATCAATATTTGCAACTTTGATCAAAATGCTGGTTGGTTTGAGTATCGGTATGATATACTGGCTACGTCTCAGAAATACAAACTGAAATTACACTCTAGTGTGAAGAGTGTCCAACGGGTTACTTTAGAAAATCTTTCATCAGAGCTCATTGTGATTCCATTTGGTTCTTCTAAATATCTCGAGCTAGAAATTTGCATAACTTGTGTAACCTTAACGGTACCTCCCATATCCTTTTATTTGCATTGGTTATTTTCCTATTAAAGTCTTATTATTTTATCTTATGTTCTGAATTTATAATCTAACATTTAATCTCAAATTCACTAGTTCTTTTCTATTTTTTGATCAGTTCTTGAAATATCAGTCATAAATTTTCTTTTATTGATATAATGGCAATTGTGGAGCAGATGGAACTATTTGTTAAAGGCCTGGATGGAGAGACGATGACCATTAAGGTTAATAGTTCAGACATGGTAGACAATCTGAAAGAGAAGATTCTTTACATGACTGCGATACCAGTGCACGCCCAACGTCTGATCTTTGCTGGTAAACAACTAGAGGACGGCCGGACCCTTGCAGATTATAACATCCAAGGTTCGTCAACCATCCACGTCCTCCTCCGCCTCCTTGGGGACTAGAAGACCACCACATCCTCGCTGATTACTACGTAGAAGAGCAGACAATCGTCCACCTCATCGTTTGCCACCGTTGGTGACCCTTATCATGAATACAATCACTCTACAAGTAGAGAAATCATTCATTATTGATAACATAGAGTCTTTGTTGAAGATTTGACTGTTGTTCTTTTTTGTTCTGTTTTGAGTTGTATACTGATTATTTTTTACTGGGAGATGATTTTTAACAATTGAGGAAACATATTTACTTCTCAAATTTTGCTGAAATCGTTCAGTAATTCTGACATAGAGTGGCTCCTGCTCTATTGTCTGATTGAAACATAATTGCAGCACCAAAGAATCATTTGATCGATATGAATCAAGTAACTTGA

Protein sequence

>MS.gene009561.t1

MCGNGHIVCSICCPKLRNKCHKCSLSISSKRCKAFENLLQSIEVSCPNRKYGCKHEEKCIYKPCYCPFSGCGFVANDTVLSNHLRFEHRDFRIKFCYGKSFVVSLKSNDETIVLYEENDGKQFILNNSTTHLGNAINICNFDQNAGWFEYRYDILATSQKYKLKLHSSVKSVQRVTLENLSSELIVIPFGSSKYLELEICITCVTLTMELFVKGLDGETMTIKVNSSDMVDNLKEKILYMTAIPVHAQRLIFAGKQLEDGRTLADYNIQAPKNHLIDMNQVT