AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063598


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063598.t1 MTR_5g076720 84.046 351 55 1 123 472 40 390 0.0 603
MS.gene063598.t1 MTR_5g076720 81.967 61 11 0 1 61 141 201 5.56e-29 118
MS.gene063598.t1 MTR_1g046640 67.823 317 98 2 156 472 3 315 5.33e-153 437
MS.gene063598.t1 MTR_1g046640 62.069 58 21 1 4 61 73 129 2.23e-16 80.1
MS.gene063598.t1 MTR_5g067400 68.038 316 98 1 156 471 3 315 4.74e-151 432
MS.gene063598.t1 MTR_5g067400 63.934 61 22 0 1 61 70 130 2.94e-20 91.7
MS.gene063598.t1 MTR_7g024290 68.868 318 95 2 156 472 3 317 2.26e-150 431
MS.gene063598.t1 MTR_7g024290 65.574 61 21 0 1 61 70 130 8.38e-20 90.5
MS.gene063598.t1 MTR_7g094390 65.741 324 108 1 149 472 157 477 8.93e-147 428
MS.gene063598.t1 MTR_7g094390 68.852 61 19 0 1 61 231 291 5.21e-22 99.0
MS.gene063598.t1 MTR_1g046650 64.706 323 110 2 150 472 28 346 4.63e-144 416
MS.gene063598.t1 MTR_1g046650 60.656 61 23 1 1 61 101 160 5.70e-16 79.3
MS.gene063598.t1 MTR_1g046650 65.506 316 105 2 157 472 4 315 9.13e-144 414
MS.gene063598.t1 MTR_1g046650 60.656 61 23 1 1 61 70 129 4.15e-16 79.3
MS.gene063598.t1 MTR_2g038420 63.582 335 119 2 141 472 1 335 5.06e-142 410
MS.gene063598.t1 MTR_2g038420 65.574 61 21 0 1 61 84 144 1.94e-19 89.7
MS.gene063598.t1 MTR_2g038430 60.641 343 124 2 141 472 1 343 5.50e-142 410
MS.gene063598.t1 MTR_2g038430 65.000 60 21 0 1 60 84 143 1.13e-19 90.5
MS.gene063598.t1 MTR_5g076520 62.813 320 116 2 156 472 3 322 1.88e-137 398
MS.gene063598.t1 MTR_5g076520 67.213 61 20 0 1 61 70 130 2.47e-20 92.0
MS.gene063598.t1 MTR_5g061290 59.385 325 127 3 151 472 5 327 1.44e-131 384
MS.gene063598.t1 MTR_5g061290 63.934 61 22 0 1 61 76 136 1.31e-19 90.1
MS.gene063598.t1 MTR_5g076370 58.772 342 133 4 133 469 1 339 1.61e-130 381
MS.gene063598.t1 MTR_5g076370 62.295 61 23 0 1 61 93 153 4.40e-18 85.9
MS.gene063598.t1 MTR_1g046650 64.966 294 99 2 179 472 26 315 7.96e-130 379
MS.gene063598.t1 MTR_1g046650 60.656 61 23 1 1 61 70 129 3.17e-16 79.7
MS.gene063598.t1 MTR_5g076660 58.358 341 135 3 133 469 1 338 2.04e-127 374
MS.gene063598.t1 MTR_5g076660 61.017 59 23 0 1 59 92 150 9.94e-17 81.6
MS.gene063598.t1 MTR_5g076810 67.528 271 84 2 202 471 2 269 5.88e-124 362
MS.gene063598.t1 MTR_5g076810 63.934 61 22 0 1 61 23 83 5.29e-20 90.1
MS.gene063598.t1 MTR_5g076505 61.092 293 114 0 180 472 23 315 1.66e-123 362
MS.gene063598.t1 MTR_5g076505 59.016 61 25 0 1 61 66 126 2.24e-17 83.2
MS.gene063598.t1 MTR_5g076820 63.869 274 94 4 156 427 12 282 1.96e-111 331
MS.gene063598.t1 MTR_5g076820 55.738 61 27 0 1 61 77 137 8.12e-16 78.2
MS.gene063598.t1 MTR_1g046650 62.400 250 90 2 223 472 1 246 1.29e-102 306
MS.gene063598.t1 MTR_1g046650 60.656 61 23 1 1 61 1 60 7.40e-17 80.5
MS.gene063598.t1 MTR_5g076540 67.857 224 72 0 157 380 4 227 3.37e-102 305
MS.gene063598.t1 MTR_5g076540 59.016 61 25 0 1 61 70 130 6.37e-16 77.8
MS.gene063598.t1 MTR_5g077020 59.204 201 69 4 205 396 16 212 2.12e-68 218
MS.gene063598.t1 MTR_5g077020 56.897 58 20 2 5 61 45 98 1.68e-12 67.4
MS.gene063598.t1 MTR_4g094468 45.188 239 126 3 155 390 88 324 3.13e-62 206
MS.gene063598.t1 MTR_4g094468 45.455 66 36 0 1 66 156 221 3.01e-12 68.2
MS.gene063598.t1 MTR_4g058025 70.175 114 33 1 235 347 15 128 2.05e-47 162
MS.gene063598.t1 MTR_4g058025 64.000 50 17 1 13 61 15 64 1.32e-12 66.6
MS.gene063598.t1 MTR_5g092700 62.667 75 28 0 397 471 1 75 2.26e-21 90.9
MS.gene063598.t1 MTR_4g073580 62.667 75 28 0 397 471 1 75 2.26e-21 90.9
MS.gene063598.t1 MTR_4g073580 62.667 75 28 0 397 471 1 75 6.07e-21 90.5
MS.gene063598.t1 MTR_5g033960 62.667 75 28 0 397 471 1 75 6.83e-21 89.7
MS.gene063598.t1 MTR_8g088060 62.667 75 28 0 397 471 1 75 7.24e-21 89.4
MS.gene063598.t1 MTR_7g116360 62.667 75 28 0 397 471 1 75 1.25e-20 90.9
MS.gene063598.t1 MTR_7g116360 62.667 75 28 0 397 471 77 151 1.25e-20 90.9
MS.gene063598.t1 MTR_7g116360 62.667 75 28 0 397 471 153 227 1.25e-20 90.9
MS.gene063598.t1 MTR_4g088485 62.667 75 28 0 397 471 1 75 1.27e-20 90.5
MS.gene063598.t1 MTR_4g088485 62.667 75 28 0 397 471 138 212 1.27e-20 90.5
MS.gene063598.t1 MTR_4g088485 54.667 75 19 1 397 471 77 136 2.89e-15 75.1
MS.gene063598.t1 MTR_1g066390 62.667 75 28 0 397 471 1 75 1.36e-20 90.9
MS.gene063598.t1 MTR_1g066390 62.667 75 28 0 397 471 77 151 1.36e-20 90.9
MS.gene063598.t1 MTR_1g066390 62.667 75 28 0 397 471 153 227 1.36e-20 90.9
MS.gene063598.t1 MTR_7g105080 62.667 75 28 0 397 471 1 75 2.22e-20 87.4
MS.gene063598.t1 MTR_3g092130 62.667 75 28 0 397 471 1 75 2.22e-20 87.4
MS.gene063598.t1 MTR_1g059690 62.667 75 28 0 397 471 1 75 2.22e-20 87.4
MS.gene063598.t1 MTR_7g116360 61.842 76 29 0 396 471 48 123 2.22e-20 91.3
MS.gene063598.t1 MTR_7g116360 62.667 75 28 0 397 471 125 199 3.73e-20 90.5
MS.gene063598.t1 MTR_7g116360 62.667 75 28 0 397 471 201 275 3.73e-20 90.5
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 1 75 3.27e-20 90.5
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 77 151 3.27e-20 90.5
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 153 227 3.27e-20 90.5
MS.gene063598.t1 MTR_3g092130 62.667 75 28 0 397 471 1 75 4.35e-20 86.7
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 1 75 4.48e-20 90.9
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 77 151 4.48e-20 90.9
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 153 227 4.48e-20 90.9
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 229 303 4.48e-20 90.9
MS.gene063598.t1 MTR_6g061930 62.667 75 28 0 397 471 1 75 5.17e-20 90.5
MS.gene063598.t1 MTR_6g061930 62.667 75 28 0 397 471 77 151 5.17e-20 90.5
MS.gene063598.t1 MTR_6g061930 62.667 75 28 0 397 471 214 288 5.17e-20 90.5
MS.gene063598.t1 MTR_6g061930 54.667 75 19 1 397 471 153 212 1.26e-15 77.8
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 1 75 5.67e-20 90.1
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 77 151 5.67e-20 90.1
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 153 227 5.67e-20 90.1
MS.gene063598.t1 MTR_7g085590 27.928 222 145 3 144 361 43 253 6.40e-20 90.1
MS.gene063598.t1 MTR_4g080920 61.333 75 29 0 397 471 77 151 7.11e-20 89.0
MS.gene063598.t1 MTR_4g080920 61.333 75 29 0 397 471 1 75 1.50e-19 87.8
MS.gene063598.t1 MTR_4g080920 49.333 75 38 0 397 471 153 227 4.51e-14 72.0
MS.gene063598.t1 MTR_4g091580 62.667 75 28 0 397 471 1 75 1.01e-19 91.3
MS.gene063598.t1 MTR_4g091580 62.667 75 28 0 397 471 77 151 1.01e-19 91.3
MS.gene063598.t1 MTR_4g091580 62.667 75 28 0 397 471 153 227 1.01e-19 91.3
MS.gene063598.t1 MTR_4g091580 62.667 75 28 0 397 471 305 379 1.01e-19 91.3
MS.gene063598.t1 MTR_4g091580 61.333 75 29 0 397 471 229 303 3.14e-19 89.7
MS.gene063598.t1 MTR_8g081020 62.667 75 28 0 397 471 1 75 1.01e-19 91.3
MS.gene063598.t1 MTR_8g081020 62.667 75 28 0 397 471 77 151 1.01e-19 91.3
MS.gene063598.t1 MTR_8g081020 62.667 75 28 0 397 471 153 227 1.01e-19 91.3
MS.gene063598.t1 MTR_8g081020 62.667 75 28 0 397 471 229 303 1.01e-19 91.3
MS.gene063598.t1 MTR_8g081020 62.667 75 28 0 397 471 305 379 1.01e-19 91.3
MS.gene063598.t1 MTR_4g080797 62.667 75 28 0 397 471 1 75 1.06e-19 90.9
MS.gene063598.t1 MTR_4g080797 62.667 75 28 0 397 471 77 151 1.06e-19 90.9
MS.gene063598.t1 MTR_4g080797 62.667 75 28 0 397 471 153 227 1.06e-19 90.9
MS.gene063598.t1 MTR_4g080797 62.667 75 28 0 397 471 229 303 1.06e-19 90.9
MS.gene063598.t1 MTR_4g080797 62.667 75 28 0 397 471 305 379 1.06e-19 90.9
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 1 75 1.06e-19 90.9
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 77 151 1.06e-19 90.9
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 153 227 1.06e-19 90.9
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 229 303 1.06e-19 90.9
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 305 379 1.06e-19 90.9
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 1 75 1.09e-19 90.9
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 77 151 1.09e-19 90.9
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 153 227 1.09e-19 90.9
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 229 303 1.09e-19 90.9
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 305 379 1.09e-19 90.9
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 1 75 1.82e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 77 151 1.82e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 153 227 1.82e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 229 303 1.82e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 305 379 1.82e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 381 455 1.82e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 1 75 1.82e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 77 151 1.82e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 153 227 1.82e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 229 303 1.82e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 305 379 1.82e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 381 455 1.82e-19 91.3
MS.gene063598.t1 MTR_4g091580 61.333 75 29 0 397 471 305 379 2.48e-19 91.3
MS.gene063598.t1 MTR_4g091580 62.667 75 28 0 397 471 1 75 2.67e-19 90.9
MS.gene063598.t1 MTR_4g091580 62.667 75 28 0 397 471 77 151 2.67e-19 90.9
MS.gene063598.t1 MTR_4g091580 62.667 75 28 0 397 471 153 227 2.67e-19 90.9
MS.gene063598.t1 MTR_4g091580 62.667 75 28 0 397 471 229 303 2.67e-19 90.9
MS.gene063598.t1 MTR_4g091580 62.667 75 28 0 397 471 381 455 2.67e-19 90.9
MS.gene063598.t1 MTR_4g091580 62.667 75 28 0 397 471 457 531 2.67e-19 90.9
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 1 75 2.50e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 77 151 2.50e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 153 227 2.50e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 229 303 2.50e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 305 379 2.50e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 381 455 2.50e-19 91.3
MS.gene063598.t1 MTR_8g018230 62.667 75 28 0 397 471 457 531 2.50e-19 91.3
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 1 75 2.55e-19 90.9
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 77 151 2.55e-19 90.9
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 153 227 2.55e-19 90.9
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 229 303 2.55e-19 90.9
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 305 379 2.55e-19 90.9
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 381 455 2.55e-19 90.9
MS.gene063598.t1 MTR_4g081010 62.667 75 28 0 397 471 457 531 2.55e-19 90.9
MS.gene063598.t1 MTR_4g088495 62.667 75 28 0 397 471 77 151 3.60e-19 91.3
MS.gene063598.t1 MTR_4g088495 62.667 75 28 0 397 471 153 227 3.60e-19 91.3
MS.gene063598.t1 MTR_4g088495 62.667 75 28 0 397 471 229 303 3.60e-19 91.3
MS.gene063598.t1 MTR_4g088495 62.667 75 28 0 397 471 305 379 3.60e-19 91.3
MS.gene063598.t1 MTR_4g088495 62.667 75 28 0 397 471 381 455 3.60e-19 91.3
MS.gene063598.t1 MTR_4g088495 62.667 75 28 0 397 471 457 531 3.60e-19 91.3
MS.gene063598.t1 MTR_4g088495 62.667 75 28 0 397 471 533 607 3.60e-19 91.3
MS.gene063598.t1 MTR_4g088495 62.667 75 28 0 397 471 609 683 3.60e-19 91.3
MS.gene063598.t1 MTR_4g088495 62.667 75 28 0 397 471 685 759 3.60e-19 91.3
MS.gene063598.t1 MTR_4g088495 62.667 75 28 0 397 471 761 835 3.60e-19 91.3
MS.gene063598.t1 MTR_4g088495 62.667 75 28 0 397 471 1 75 4.42e-19 90.9
MS.gene063598.t1 MTR_5g076680 75.472 53 12 1 129 180 10 62 7.40e-18 81.3
MS.gene063598.t1 MTR_8g038370 28.095 210 141 5 164 363 112 321 2.05e-17 84.0
MS.gene063598.t1 MTR_5g061310 48.684 76 39 0 397 472 2 77 1.23e-16 75.1
MS.gene063598.t1 MTR_3g017590 33.621 116 75 1 164 277 53 168 1.27e-16 80.9
MS.gene063598.t1 MTR_8g479250 57.831 83 35 0 389 471 133 215 4.23e-16 79.3
MS.gene063598.t1 MTR_8g479250 52.778 72 23 1 397 468 217 277 5.53e-13 70.1
MS.gene063598.t1 MTR_7g117415 32.812 128 84 1 153 278 50 177 6.40e-15 75.9
MS.gene063598.t1 MTR_8g027520 34.545 110 72 0 152 261 41 150 1.06e-14 75.5
MS.gene063598.t1 MTR_3g091510 32.143 140 90 2 153 290 49 185 1.07e-14 75.5
MS.gene063598.t1 MTR_8g027520 34.545 110 72 0 152 261 32 141 1.17e-14 75.1
MS.gene063598.t1 MTR_1g054335 26.667 210 144 5 163 362 57 266 4.74e-14 73.2
MS.gene063598.t1 MTR_4g009980 50.000 68 34 0 405 472 4 71 6.26e-14 67.0
MS.gene063598.t1 MTR_1g008120 31.206 141 92 2 152 290 56 193 7.25e-14 73.2
MS.gene063598.t1 MTR_7g093600 25.283 265 179 8 116 362 4 267 1.25e-13 72.0
MS.gene063598.t1 MTR_5g076350 45.455 77 41 1 397 472 8 84 2.42e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063598.t1 AT5G37930 33.613 238 154 2 157 390 103 340 6.11e-40 147
MS.gene063598.t1 AT5G37870 33.778 225 144 4 158 377 36 260 6.12e-36 134
MS.gene063598.t1 AT5G37890 31.461 267 164 6 115 377 14 265 6.41e-34 129
MS.gene063598.t1 AT1G66650 32.422 256 154 7 131 377 60 305 1.42e-32 127
MS.gene063598.t1 AT5G37910 31.624 234 154 3 150 377 21 254 1.08e-31 123
MS.gene063598.t1 AT1G66620 28.938 273 180 4 131 390 3 274 1.02e-30 121
MS.gene063598.t1 AT1G66660 31.225 253 162 6 150 391 89 340 1.49e-30 121
MS.gene063598.t1 AT5G62800 34.759 187 116 4 163 343 39 225 2.07e-26 109
MS.gene063598.t1 AT5G62800 34.759 187 116 4 163 343 39 225 2.61e-26 109
MS.gene063598.t1 AT1G66630 31.390 223 146 4 163 378 45 267 4.09e-24 102
MS.gene063598.t1 AT4G05050 62.667 75 28 0 397 471 1 75 2.37e-21 90.9
MS.gene063598.t1 AT4G05050 62.667 75 28 0 397 471 77 151 2.37e-21 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 1 75 2.37e-21 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 77 151 2.37e-21 90.9
MS.gene063598.t1 AT2G35635 62.667 75 28 0 397 471 1 75 2.43e-21 90.9
MS.gene063598.t1 AT1G31340 62.667 75 28 0 397 471 1 75 2.56e-21 90.9
MS.gene063598.t1 AT3G62250 62.667 75 28 0 397 471 1 75 2.71e-21 90.9
MS.gene063598.t1 AT2G47110 62.667 75 28 0 397 471 1 75 3.08e-21 90.5
MS.gene063598.t1 AT2G47110 62.667 75 28 0 397 471 1 75 3.08e-21 90.5
MS.gene063598.t1 AT4G05050 62.667 75 28 0 397 471 1 75 1.31e-20 90.9
MS.gene063598.t1 AT4G05050 62.667 75 28 0 397 471 77 151 1.31e-20 90.9
MS.gene063598.t1 AT4G05050 62.667 75 28 0 397 471 153 227 1.31e-20 90.9
MS.gene063598.t1 AT4G05050 62.667 75 28 0 397 471 1 75 1.31e-20 90.9
MS.gene063598.t1 AT4G05050 62.667 75 28 0 397 471 77 151 1.31e-20 90.9
MS.gene063598.t1 AT4G05050 62.667 75 28 0 397 471 153 227 1.31e-20 90.9
MS.gene063598.t1 AT4G05050 62.667 75 28 0 397 471 1 75 1.31e-20 90.9
MS.gene063598.t1 AT4G05050 62.667 75 28 0 397 471 77 151 1.31e-20 90.9
MS.gene063598.t1 AT4G05050 62.667 75 28 0 397 471 153 227 1.31e-20 90.9
MS.gene063598.t1 AT4G02890 62.667 75 28 0 397 471 1 75 1.31e-20 90.9
MS.gene063598.t1 AT4G02890 62.667 75 28 0 397 471 77 151 1.31e-20 90.9
MS.gene063598.t1 AT4G02890 62.667 75 28 0 397 471 153 227 1.31e-20 90.9
MS.gene063598.t1 AT4G02890 62.667 75 28 0 397 471 1 75 1.31e-20 90.9
MS.gene063598.t1 AT4G02890 62.667 75 28 0 397 471 77 151 1.31e-20 90.9
MS.gene063598.t1 AT4G02890 62.667 75 28 0 397 471 153 227 1.31e-20 90.9
MS.gene063598.t1 AT1G23410 62.667 75 28 0 397 471 1 75 1.31e-20 89.0
MS.gene063598.t1 AT3G52590 62.667 75 28 0 397 471 1 75 2.83e-20 87.0
MS.gene063598.t1 AT2G36170 62.667 75 28 0 397 471 1 75 2.83e-20 87.0
MS.gene063598.t1 AT5G37640 62.667 75 28 0 397 471 79 153 3.25e-20 91.7
MS.gene063598.t1 AT5G37640 60.000 75 30 0 397 471 155 229 1.36e-17 84.0
MS.gene063598.t1 AT5G37640 60.526 76 29 1 397 471 231 306 2.19e-16 80.5
MS.gene063598.t1 AT5G37640 53.333 75 35 0 397 471 3 77 6.05e-15 76.3
MS.gene063598.t1 AT1G55060 61.333 75 29 0 397 471 77 151 3.81e-20 89.7
MS.gene063598.t1 AT1G55060 60.000 75 30 0 397 471 153 227 2.74e-18 84.3
MS.gene063598.t1 AT1G55060 57.333 75 32 0 397 471 1 75 5.92e-18 83.2
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 1 75 4.35e-20 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 77 151 4.35e-20 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 153 227 4.35e-20 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 229 303 4.35e-20 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 1 75 4.35e-20 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 77 151 4.35e-20 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 153 227 4.35e-20 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 229 303 4.35e-20 91.3
MS.gene063598.t1 AT4G02890 62.667 75 28 0 397 471 1 75 4.35e-20 91.3
MS.gene063598.t1 AT4G02890 62.667 75 28 0 397 471 77 151 4.35e-20 91.3
MS.gene063598.t1 AT4G02890 62.667 75 28 0 397 471 153 227 4.35e-20 91.3
MS.gene063598.t1 AT4G02890 62.667 75 28 0 397 471 229 303 4.35e-20 91.3
MS.gene063598.t1 AT4G02890 62.667 75 28 0 397 471 1 75 4.35e-20 91.3
MS.gene063598.t1 AT4G02890 62.667 75 28 0 397 471 77 151 4.35e-20 91.3
MS.gene063598.t1 AT4G02890 62.667 75 28 0 397 471 153 227 4.35e-20 91.3
MS.gene063598.t1 AT4G02890 62.667 75 28 0 397 471 229 303 4.35e-20 91.3
MS.gene063598.t1 AT5G03240 62.667 75 28 0 397 471 1 75 4.37e-20 91.3
MS.gene063598.t1 AT5G03240 62.667 75 28 0 397 471 77 151 4.37e-20 91.3
MS.gene063598.t1 AT5G03240 62.667 75 28 0 397 471 153 227 4.37e-20 91.3
MS.gene063598.t1 AT5G03240 62.667 75 28 0 397 471 229 303 4.37e-20 91.3
MS.gene063598.t1 AT5G03240 62.667 75 28 0 397 471 1 75 4.37e-20 91.3
MS.gene063598.t1 AT5G03240 62.667 75 28 0 397 471 77 151 4.37e-20 91.3
MS.gene063598.t1 AT5G03240 62.667 75 28 0 397 471 153 227 4.37e-20 91.3
MS.gene063598.t1 AT5G03240 62.667 75 28 0 397 471 229 303 4.37e-20 91.3
MS.gene063598.t1 AT5G03240 62.667 75 28 0 397 471 1 75 4.37e-20 91.3
MS.gene063598.t1 AT5G03240 62.667 75 28 0 397 471 77 151 4.37e-20 91.3
MS.gene063598.t1 AT5G03240 62.667 75 28 0 397 471 153 227 4.37e-20 91.3
MS.gene063598.t1 AT5G03240 62.667 75 28 0 397 471 229 303 4.37e-20 91.3
MS.gene063598.t1 AT5G20620 62.667 75 28 0 397 471 1 75 4.37e-20 91.3
MS.gene063598.t1 AT5G20620 62.667 75 28 0 397 471 77 151 4.37e-20 91.3
MS.gene063598.t1 AT5G20620 62.667 75 28 0 397 471 153 227 4.37e-20 91.3
MS.gene063598.t1 AT5G20620 62.667 75 28 0 397 471 229 303 4.37e-20 91.3
MS.gene063598.t1 AT1G65350 62.667 75 28 0 397 471 1 75 4.83e-20 91.3
MS.gene063598.t1 AT1G65350 62.667 75 28 0 397 471 152 226 1.55e-19 89.7
MS.gene063598.t1 AT1G65350 61.333 75 28 1 397 471 77 150 1.98e-17 83.6
MS.gene063598.t1 AT1G65350 51.685 89 29 1 397 471 228 316 6.75e-15 75.9
MS.gene063598.t1 AT5G20620 62.667 75 28 0 397 471 1 75 1.07e-19 91.3
MS.gene063598.t1 AT5G20620 62.667 75 28 0 397 471 77 151 1.07e-19 91.3
MS.gene063598.t1 AT5G20620 62.667 75 28 0 397 471 153 227 1.07e-19 91.3
MS.gene063598.t1 AT5G20620 62.667 75 28 0 397 471 229 303 1.07e-19 91.3
MS.gene063598.t1 AT5G20620 62.667 75 28 0 397 471 305 379 1.07e-19 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 1 75 1.11e-19 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 77 151 1.11e-19 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 153 227 1.11e-19 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 229 303 1.11e-19 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 305 379 1.11e-19 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 1 75 1.11e-19 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 77 151 1.11e-19 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 153 227 1.11e-19 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 229 303 1.11e-19 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 305 379 1.11e-19 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 1 75 1.11e-19 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 77 151 1.11e-19 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 153 227 1.11e-19 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 229 303 1.11e-19 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 305 379 1.11e-19 90.9
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 1 75 1.91e-19 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 77 151 1.91e-19 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 153 227 1.91e-19 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 229 303 1.91e-19 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 305 379 1.91e-19 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 381 455 1.91e-19 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 1 75 1.91e-19 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 77 151 1.91e-19 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 153 227 1.91e-19 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 229 303 1.91e-19 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 305 379 1.91e-19 91.3
MS.gene063598.t1 AT4G05320 62.667 75 28 0 397 471 381 455 1.91e-19 91.3
MS.gene063598.t1 AT3G09790 61.333 75 29 0 397 471 79 153 1.71e-17 85.9
MS.gene063598.t1 AT3G09790 57.333 75 32 0 397 471 3 77 5.66e-16 80.9
MS.gene063598.t1 AT3G09790 50.685 73 36 0 397 469 552 624 1.20e-11 67.4
MS.gene063598.t1 AT3G09790 61.333 75 29 0 397 471 79 153 1.71e-17 85.9
MS.gene063598.t1 AT3G09790 57.333 75 32 0 397 471 3 77 5.66e-16 80.9
MS.gene063598.t1 AT3G09790 50.685 73 36 0 397 469 552 624 1.20e-11 67.4
MS.gene063598.t1 AT1G66660 28.788 198 129 6 205 391 20 216 1.63e-15 76.3
MS.gene063598.t1 AT3G61790 35.238 105 68 0 155 259 51 155 1.48e-14 75.1
MS.gene063598.t1 AT3G58040 29.921 127 88 1 164 290 57 182 5.64e-14 71.6
MS.gene063598.t1 AT3G58040 25.837 209 145 5 164 362 57 265 7.58e-14 72.8
MS.gene063598.t1 AT3G58040 25.837 209 145 5 164 362 57 265 7.58e-14 72.8
MS.gene063598.t1 AT4G27880 32.558 129 82 2 164 290 61 186 1.19e-13 72.4
MS.gene063598.t1 AT2G41980 33.673 98 65 0 164 261 54 151 7.51e-13 69.7
MS.gene063598.t1 AT1G53930 46.575 73 39 0 397 469 86 158 9.28e-13 66.6
MS.gene063598.t1 AT1G66610 31.818 110 74 1 122 230 115 224 2.78e-11 63.9
MS.gene063598.t1 AT1G53950 41.333 75 44 0 397 471 69 143 5.23e-11 61.2

Find 86 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAGAATCCCCGTGTTTA+TGG 0.126665 5.2:-65418857 None:intergenic
CACCTTGTCCTCCGCCTTCT+TGG 0.139255 5.2:+65419612 MS.gene063598:CDS
TTGCAGCACTCAAGCAAATT+AGG 0.141972 5.2:-65417901 None:intergenic
CCCTGTTACTGTCCCTTTCC+AGG 0.241413 5.2:+65417396 MS.gene063598:CDS
TTTGAGAATCCCCGTGTTTA+TGG 0.252861 5.2:-65417464 None:intergenic
ACCTTGTCCTCCGCCTTCTT+GGG 0.253046 5.2:+65419613 MS.gene063598:CDS
ACAAAGTCACATCCTGAAAA+TGG 0.263384 5.2:-65418801 None:intergenic
TCCTGAAAATGGACAGTAAC+AGG 0.279926 5.2:-65418790 None:intergenic
TCCTGGAAAGGGACAGTAAC+AGG 0.288244 5.2:-65417397 None:intergenic
AAAATCATCTCTTTCACTTT+GGG 0.291475 5.2:-65419480 None:intergenic
AGTAACCCGTTGGACATTCT+TGG 0.294714 5.2:-65419108 None:intergenic
ACAGAGAAACTAGAAATTAT+AGG 0.298509 5.2:-65417672 None:intergenic
AGGGACAGTAACAGGGCTTA+TGG 0.300784 5.2:-65417389 None:intergenic
GCTGTCAATATTTGCTGCTT+TGG 0.309542 5.2:+65419005 MS.gene063598:CDS
CCATGTCCGAATGCAAAATA+TGG 0.313132 5.2:+65418705 MS.gene063598:CDS
AATAATAGTACTATGTTGTT+AGG 0.345128 5.2:+65418978 MS.gene063598:CDS
ATGGACAGTAACAGGGCTTA+TGG 0.353543 5.2:-65418782 None:intergenic
TGACACTCGTTCCAAAGTTT+AGG 0.359248 5.2:-65418612 None:intergenic
TTTACAACGTTTAGAGCTAA+TGG 0.363973 5.2:-65418649 None:intergenic
AGCTTATATGAAGCAAAATA+TGG 0.369903 5.2:-65417567 None:intergenic
ATCTATGTAAAGGGTCTAGA+TGG 0.375383 5.2:+65419417 MS.gene063598:CDS
TGCAGCACTCAAGCAAATTA+GGG 0.375478 5.2:-65417900 None:intergenic
TGCAGATTACAACGTCAAAA+AGG 0.375617 5.2:+65419578 MS.gene063598:CDS
CCATGTCCGAATGCAAAATA+TGG 0.389988 5.2:+65417312 MS.gene063598:CDS
GAGTTCCTTGTGATTCCATT+TGG 0.390707 5.2:+65419149 MS.gene063598:CDS
AAAATATGGCCACATACGTC+TGG 0.391341 5.2:-65417553 None:intergenic
CTTCATGATTTGTCTGCCTA+AGG 0.391596 5.2:-65417356 None:intergenic
GAAAATCATCTCTTTCACTT+TGG 0.396588 5.2:-65419481 None:intergenic
ATCAGACGTTGGGCGTGCAC+TGG 0.398715 5.2:-65419519 None:intergenic
GCCCAACGTCTGATCTTTGC+TGG 0.415935 5.2:+65419528 MS.gene063598:CDS
GGGACAGTAACAGGGCTTAT+GGG 0.416127 5.2:-65417388 None:intergenic
CGAATGCAAAATATGGTTGC+AGG 0.426913 5.2:+65417319 MS.gene063598:CDS
CGAATGCAAAATATGGTTGC+AGG 0.426913 5.2:+65418712 MS.gene063598:CDS
CTACTTGCTGTCCTAAACTT+TGG 0.429461 5.2:+65418601 MS.gene063598:CDS
GATGTGTACTTTGGCACATT+TGG 0.430857 5.2:-65417631 None:intergenic
GTATGCAACTCGATGGCAAC+CGG 0.449827 5.2:+65419550 MS.gene063598:CDS
GGTTTCATCATCAGACTTCA+AGG 0.452534 5.2:-65418913 None:intergenic
CGTTGTAATCTGCAAGGGTC+CGG 0.457118 5.2:-65419569 None:intergenic
GCAGATGCAAATCTATGTAA+AGG 0.490691 5.2:+65419407 MS.gene063598:intron
TACTCAGACTCAGAAGCGTC+TGG 0.490998 5.2:-65419029 None:intergenic
GTTGCTACCGATGTGTACTT+TGG 0.491765 5.2:-65417640 None:intergenic
TGAGTATAGTTACGATATGT+TGG 0.492716 5.2:+65419046 MS.gene063598:CDS
CAGATGCAAATCTATGTAAA+GGG 0.507120 5.2:+65419408 MS.gene063598:intron
CCCCAAGAAGGCGGAGGACA+AGG 0.509638 5.2:-65419614 None:intergenic
ACCAGCAAAGATCAGACGTT+GGG 0.512651 5.2:-65419529 None:intergenic
CTGCAAAGCCCAGACGTATG+TGG 0.515582 5.2:+65417544 MS.gene063598:CDS
CCTTGTCCTCCGCCTTCTTG+GGG 0.516184 5.2:+65419614 MS.gene063598:CDS
TTCTCAAATCAAATCTAAAG+TGG 0.518276 5.2:+65417479 MS.gene063598:CDS
GAAGGCGGAGGACAAGGTGG+AGG 0.519053 5.2:-65419608 None:intergenic
AGAGGTTCGAAAGAACCAAA+TGG 0.528774 5.2:-65419164 None:intergenic
GATTCAACAAAGTCACATCC+TGG 0.531359 5.2:-65417414 None:intergenic
TCAGACGTTGGGCGTGCACT+GGG 0.537871 5.2:-65419518 None:intergenic
AATGGAATCACAAGGAACTC+TGG 0.539435 5.2:-65419146 None:intergenic
GCACTCAAGCAAATTAGGGT+TGG 0.551048 5.2:-65417896 None:intergenic
TTTGACGTTGTAATCTGCAA+GGG 0.554769 5.2:-65419574 None:intergenic
ATGCAAATTTCTAAGTTGAG+AGG 0.555054 5.2:-65419182 None:intergenic
TTGACGTTAAGAGTTCATAC+AGG 0.555320 5.2:+65419454 MS.gene063598:CDS
ACAAAGTCACATCCTGGAAA+GGG 0.560926 5.2:-65417408 None:intergenic
TGCATTTCAGCCATAAACAC+GGG 0.562870 5.2:+65417454 MS.gene063598:CDS
AACAAAGTCACATCCTGGAA+AGG 0.568485 5.2:-65417409 None:intergenic
CTATTAGGCAAAAGATGAAG+TGG 0.582360 5.2:+65417795 MS.gene063598:intron
AGACTTCAAGGAGATAATGA+AGG 0.588983 5.2:-65418901 None:intergenic
GATTTGCTAAAGTAACCCGT+TGG 0.604139 5.2:-65419118 None:intergenic
AAATATGGCCACATACGTCT+GGG 0.604553 5.2:-65417552 None:intergenic
TGAAACCATTGTTCTTCGAG+AGG 0.606566 5.2:+65418929 MS.gene063598:CDS
AAGGCGGAGGACAAGGTGGA+GGG 0.612344 5.2:-65419607 None:intergenic
ATGCATTTCAGCCATAAACA+CGG 0.617311 5.2:+65417453 MS.gene063598:CDS
TGGTCATCTAGTCCCCAAGA+AGG 0.623962 5.2:-65419626 None:intergenic
TGATAGCAATAGATTCTCAA+CGG 0.627080 5.2:-65418673 None:intergenic
CCTGAAAATGGACAGTAACA+GGG 0.627412 5.2:-65418789 None:intergenic
TCTAGTCCCCAAGAAGGCGG+AGG 0.628903 5.2:-65419620 None:intergenic
TTTGCTGGTATGCAACTCGA+TGG 0.631021 5.2:+65419543 MS.gene063598:CDS
CAAGAAGGCGGAGGACAAGG+TGG 0.631891 5.2:-65419611 None:intergenic
GGGTCTAGATGGAAAGACAA+TGG 0.637376 5.2:+65419428 MS.gene063598:CDS
GAATGCAAAATATGGTTGCA+GGG 0.639123 5.2:+65417320 MS.gene063598:CDS
GAATGCAAAATATGGTTGCA+GGG 0.639123 5.2:+65418713 MS.gene063598:CDS
TGTATGAACTCTTAACGTCA+AGG 0.640853 5.2:-65419452 None:intergenic
CCTGGAAAGGGACAGTAACA+GGG 0.643610 5.2:-65417396 None:intergenic
GTTGGAAATCACAAGAGGAA+CGG 0.646160 5.2:-65417878 None:intergenic
TACCAGCAAAGATCAGACGT+TGG 0.660071 5.2:-65419530 None:intergenic
TTAGGGTTGGAAATCACAAG+AGG 0.666490 5.2:-65417883 None:intergenic
TCATCTAGTCCCCAAGAAGG+CGG 0.681661 5.2:-65419623 None:intergenic
AAGAACCAAATGGAATCACA+AGG 0.686822 5.2:-65419154 None:intergenic
AAATGTGCCAAAGTACACAT+CGG 0.705798 5.2:+65417633 MS.gene063598:CDS
GCATTTCAGCCATAAACACG+GGG 0.722344 5.2:+65417455 MS.gene063598:CDS
GGATATAGGAGGTACCCTGG+GGG 0.726924 5.2:-65419216 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTTAAACACTATT+AGG + chr5.2:65417780-65417799 MS.gene063598:intron 10.0%
!! AATATAGTTATCAAAGTTAA+TGG - chr5.2:65418397-65418416 None:intergenic 15.0%
!! GAAGATAATAACAATTTAAT+AGG - chr5.2:65419263-65419282 None:intergenic 15.0%
!! TATAAAATCTCAAAAATAGA+AGG - chr5.2:65418345-65418364 None:intergenic 15.0%
!! AAAATAACAAAGCAAAGAAA+AGG - chr5.2:65419240-65419259 None:intergenic 20.0%
!! AATAATAGTACTATGTTGTT+AGG + chr5.2:65418978-65418997 MS.gene063598:CDS 20.0%
!! TCTTGAAATATACTAGAAAA+AGG - chr5.2:65418063-65418082 None:intergenic 20.0%
!!! ACAAAGACATTCTTTAAAAA+AGG + chr5.2:65417602-65417621 MS.gene063598:CDS 20.0%
!!! ATCAAAGCATTTAAAATTGT+TGG - chr5.2:65418209-65418228 None:intergenic 20.0%
!!! CAAAGACATTCTTTAAAAAA+GGG + chr5.2:65417603-65417622 MS.gene063598:CDS 20.0%
!!! TCAAAGCATTTAAAATTGTT+GGG - chr5.2:65418208-65418227 None:intergenic 20.0%
!!! TCTCAAATCAAATTTTCTTA+TGG + chr5.2:65418873-65418892 MS.gene063598:CDS 20.0%
!!! TTTGAGATTTTATATTTGCA+TGG + chr5.2:65418351-65418370 MS.gene063598:intron 20.0%
!!! TTTTTAAAGAATGTCTTTGT+CGG - chr5.2:65417602-65417621 None:intergenic 20.0%
! AAAATCATCTCTTTCACTTT+GGG - chr5.2:65419483-65419502 None:intergenic 25.0%
! AAACAAGTCTTAAGTCTATA+AGG - chr5.2:65418245-65418264 None:intergenic 25.0%
! ACAAATACATACCTGAAAAA+CGG - chr5.2:65417950-65417969 None:intergenic 25.0%
! ACAGAGAAACTAGAAATTAT+AGG - chr5.2:65417675-65417694 None:intergenic 25.0%
! AGCTTATATGAAGCAAAATA+TGG - chr5.2:65417570-65417589 None:intergenic 25.0%
! TTCTCAAATCAAATCTAAAG+TGG + chr5.2:65417479-65417498 MS.gene063598:CDS 25.0%
!! AATCTAAAGTGGAGAAAAAT+AGG + chr5.2:65417490-65417509 MS.gene063598:CDS 25.0%
!! CTATATTGTCGTAACATTTT+TGG + chr5.2:65418410-65418429 MS.gene063598:intron 25.0%
!! TATACTTTTGATCACATAAC+TGG + chr5.2:65418507-65418526 MS.gene063598:intron 25.0%
!! TCATATATGCAATATGCTTT+TGG + chr5.2:65418022-65418041 MS.gene063598:intron 25.0%
!! TCTATTGTTGATCGTTTTAT+TGG + chr5.2:65419374-65419393 MS.gene063598:intron 25.0%
!!! TAGTATGATTAGCTTTATGT+TGG + chr5.2:65418483-65418502 MS.gene063598:intron 25.0%
CAAAGCAAAGAAAAGGATAT+AGG - chr5.2:65419233-65419252 None:intergenic 30.0%
CAAATACATACCTGAAAAAC+GGG - chr5.2:65417949-65417968 None:intergenic 30.0%
CAGATGCAAATCTATGTAAA+GGG + chr5.2:65419408-65419427 MS.gene063598:intron 30.0%
GAAAATCATCTCTTTCACTT+TGG - chr5.2:65419484-65419503 None:intergenic 30.0%
TCTTAAGTCTATAAGGCTTA+AGG - chr5.2:65418238-65418257 None:intergenic 30.0%
TGAAAAACGGGAATCATTAA+GGG - chr5.2:65417937-65417956 None:intergenic 30.0%
TGAGTATAGTTACGATATGT+TGG + chr5.2:65419046-65419065 MS.gene063598:CDS 30.0%
TGATAGCAATAGATTCTCAA+CGG - chr5.2:65418676-65418695 None:intergenic 30.0%
! AAGACTTGTTTGCTTTACAT+TGG + chr5.2:65418254-65418273 MS.gene063598:intron 30.0%
! AATCACTAACAACACGTTTT+TGG - chr5.2:65419346-65419365 None:intergenic 30.0%
! AGACTTGTTTGCTTTACATT+GGG + chr5.2:65418255-65418274 MS.gene063598:intron 30.0%
! ATGCAAATTTCTAAGTTGAG+AGG - chr5.2:65419185-65419204 None:intergenic 30.0%
! ATGCATTTTTGCCATAAACA+CGG + chr5.2:65418846-65418865 MS.gene063598:CDS 30.0%
! GAATTTGAGATCAAAAGCTA+TGG - chr5.2:65419307-65419326 None:intergenic 30.0%
! GCTGTTCTTACTATCTTTTA+CGG - chr5.2:65417857-65417876 None:intergenic 30.0%
! TTTACAACGTTTAGAGCTAA+TGG - chr5.2:65418652-65418671 None:intergenic 30.0%
AAATGTGCCAAAGTACACAT+CGG + chr5.2:65417633-65417652 MS.gene063598:CDS 35.0%
AAGAACCAAATGGAATCACA+AGG - chr5.2:65419157-65419176 None:intergenic 35.0%
ACAAAGTCACATCCTGAAAA+TGG - chr5.2:65418804-65418823 None:intergenic 35.0%
AGACTTCAAGGAGATAATGA+AGG - chr5.2:65418904-65418923 None:intergenic 35.0%
AGCAAAGAAAAGGATATAGG+AGG - chr5.2:65419230-65419249 None:intergenic 35.0%
ATCTATGTAAAGGGTCTAGA+TGG + chr5.2:65419417-65419436 MS.gene063598:CDS 35.0%
ATGCATTTCAGCCATAAACA+CGG + chr5.2:65417453-65417472 MS.gene063598:CDS 35.0%
CTATTAGGCAAAAGATGAAG+TGG + chr5.2:65417795-65417814 MS.gene063598:intron 35.0%
CTGAAAAACGGGAATCATTA+AGG - chr5.2:65417938-65417957 None:intergenic 35.0%
GAATGCAAAATATGGTTGCA+GGG + chr5.2:65417320-65417339 MS.gene063598:CDS 35.0%
GAGTTTCACATAGCACTTAA+GGG - chr5.2:65418107-65418126 None:intergenic 35.0%
GCAGATGCAAATCTATGTAA+AGG + chr5.2:65419407-65419426 MS.gene063598:intron 35.0%
TGCAGATTACAACGTCAAAA+AGG + chr5.2:65419578-65419597 MS.gene063598:CDS 35.0%
TGTATGAACTCTTAACGTCA+AGG - chr5.2:65419455-65419474 None:intergenic 35.0%
TTGACGTTAAGAGTTCATAC+AGG + chr5.2:65419454-65419473 MS.gene063598:CDS 35.0%
TTTGACGTTGTAATCTGCAA+GGG - chr5.2:65419577-65419596 None:intergenic 35.0%
! ATTTTCCTCTCGAAGAACAA+TGG - chr5.2:65418937-65418956 None:intergenic 35.0%
! CTGCAACCATATTTTGCATT+CGG - chr5.2:65417321-65417340 None:intergenic 35.0%
! GAAAGAGATGATTTTCGACA+TGG + chr5.2:65419488-65419507 MS.gene063598:CDS 35.0%
! TGCATTTTTGCCATAAACAC+GGG + chr5.2:65418847-65418866 MS.gene063598:CDS 35.0%
! TTTTGACGTTGTAATCTGCA+AGG - chr5.2:65419578-65419597 None:intergenic 35.0%
!! CTTAATGATTCCCGTTTTTC+AGG + chr5.2:65417936-65417955 MS.gene063598:CDS 35.0%
!! GATCGTTTTATTGGCAATTG+TGG + chr5.2:65419383-65419402 MS.gene063598:intron 35.0%
!! GGTTAACAAAGTCGATTTGA+TGG + chr5.2:65418528-65418547 MS.gene063598:intron 35.0%
AAAATATGGCCACATACGTC+TGG - chr5.2:65417556-65417575 None:intergenic 40.0%
AAATATGGCCACATACGTCT+GGG - chr5.2:65417555-65417574 None:intergenic 40.0%
AACAAAGTCACATCCTGGAA+AGG - chr5.2:65417412-65417431 None:intergenic 40.0%
AATGGAATCACAAGGAACTC+TGG - chr5.2:65419149-65419168 None:intergenic 40.0%
ACAAAGTCACATCCTGGAAA+GGG - chr5.2:65417411-65417430 None:intergenic 40.0%
AGAGGTTCGAAAGAACCAAA+TGG - chr5.2:65419167-65419186 None:intergenic 40.0%
ATCACCGTTATCAGTCACTT+AGG - chr5.2:65418171-65418190 None:intergenic 40.0%
CCATGTCCGAATGCAAAATA+TGG + chr5.2:65417312-65417331 MS.gene063598:CDS 40.0%
CCTGAAAATGGACAGTAACA+GGG - chr5.2:65418792-65418811 None:intergenic 40.0%
CGAATGCAAAATATGGTTGC+AGG + chr5.2:65417319-65417338 MS.gene063598:CDS 40.0%
GAGTTCCTTGTGATTCCATT+TGG + chr5.2:65419149-65419168 MS.gene063598:CDS 40.0%
GATGTGTACTTTGGCACATT+TGG - chr5.2:65417634-65417653 None:intergenic 40.0%
GATTCAACAAAGTCACATCC+TGG - chr5.2:65417417-65417436 None:intergenic 40.0%
GGAGTTTCACATAGCACTTA+AGG - chr5.2:65418108-65418127 None:intergenic 40.0%
GGGTGAAAAATACGTACATG+AGG + chr5.2:65418733-65418752 MS.gene063598:CDS 40.0%
GGGTGAAAAATACGTACCTT+AGG + chr5.2:65417340-65417359 MS.gene063598:CDS 40.0%
GGTTTCATCATCAGACTTCA+AGG - chr5.2:65418916-65418935 None:intergenic 40.0%
GTGACCTAAGTGACTGATAA+CGG + chr5.2:65418164-65418183 MS.gene063598:intron 40.0%
GTTGGAAATCACAAGAGGAA+CGG - chr5.2:65417881-65417900 None:intergenic 40.0%
TCCACGAATAGACATTTGGA+GGG + chr5.2:65418142-65418161 MS.gene063598:intron 40.0%
TCCTGAAAATGGACAGTAAC+AGG - chr5.2:65418793-65418812 None:intergenic 40.0%
TGAAACCATTGTTCTTCGAG+AGG + chr5.2:65418929-65418948 MS.gene063598:CDS 40.0%
TGACACTCGTTCCAAAGTTT+AGG - chr5.2:65418615-65418634 None:intergenic 40.0%
TGCAGCACTCAAGCAAATTA+GGG - chr5.2:65417903-65417922 None:intergenic 40.0%
TGCATTTCAGCCATAAACAC+GGG + chr5.2:65417454-65417473 MS.gene063598:CDS 40.0%
TTAGGGTTGGAAATCACAAG+AGG - chr5.2:65417886-65417905 None:intergenic 40.0%
TTGCAGCACTCAAGCAAATT+AGG - chr5.2:65417904-65417923 None:intergenic 40.0%
TTTCACATAGCACTTAAGGG+AGG - chr5.2:65418104-65418123 None:intergenic 40.0%
TTTGAGAATCCCCGTGTTTA+TGG - chr5.2:65417467-65417486 None:intergenic 40.0%
! CCATATTTTGCATTCGGACA+TGG - chr5.2:65417315-65417334 None:intergenic 40.0%
! CTTCATGATTTGTCTGCCTA+AGG - chr5.2:65417359-65417378 None:intergenic 40.0%
! CTTTTGCCAAGAATGTCCAA+CGG + chr5.2:65419102-65419121 MS.gene063598:CDS 40.0%
! GCATTTTTGCCATAAACACG+GGG + chr5.2:65418848-65418867 MS.gene063598:CDS 40.0%
! GCTGTCAATATTTGCTGCTT+TGG + chr5.2:65419005-65419024 MS.gene063598:CDS 40.0%
! TTTTGCCAAGAATGTCCAAC+GGG + chr5.2:65419103-65419122 MS.gene063598:CDS 40.0%
!! CTACTTGCTGTCCTAAACTT+TGG + chr5.2:65418601-65418620 MS.gene063598:CDS 40.0%
!! GATTTGCTAAAGTAACCCGT+TGG - chr5.2:65419121-65419140 None:intergenic 40.0%
ACCAGCAAAGATCAGACGTT+GGG - chr5.2:65419532-65419551 None:intergenic 45.0%
ACCCTCCAAATGTCTATTCG+TGG - chr5.2:65418146-65418165 None:intergenic 45.0%
ACTCAATGACTGACAGTAGC+TGG - chr5.2:65418438-65418457 None:intergenic 45.0%
AGTAACCCGTTGGACATTCT+TGG - chr5.2:65419111-65419130 None:intergenic 45.0%
ATGGACAGTAACAGGGCTTA+TGG - chr5.2:65418785-65418804 None:intergenic 45.0%
CACGTCCACGAATAGACATT+TGG + chr5.2:65418138-65418157 MS.gene063598:intron 45.0%
GCACTCAAGCAAATTAGGGT+TGG - chr5.2:65417899-65417918 None:intergenic 45.0%
GCATTTCAGCCATAAACACG+GGG + chr5.2:65417455-65417474 MS.gene063598:CDS 45.0%
GGGTCTAGATGGAAAGACAA+TGG + chr5.2:65419428-65419447 MS.gene063598:CDS 45.0%
GTCCACGAATAGACATTTGG+AGG + chr5.2:65418141-65418160 MS.gene063598:intron 45.0%
GTTGCTACCGATGTGTACTT+TGG - chr5.2:65417643-65417662 None:intergenic 45.0%
TACCAGCAAAGATCAGACGT+TGG - chr5.2:65419533-65419552 None:intergenic 45.0%
TTTGCTGGTATGCAACTCGA+TGG + chr5.2:65419543-65419562 MS.gene063598:CDS 45.0%
! CCCTGTTACTGTCCATTTTC+AGG + chr5.2:65418789-65418808 MS.gene063598:CDS 45.0%
!! AAAGGATATAGGAGGTACCC+TGG - chr5.2:65419222-65419241 None:intergenic 45.0%
!! AAGGATATAGGAGGTACCCT+GGG - chr5.2:65419221-65419240 None:intergenic 45.0%
!! AGTGACTGATAACGGTGATC+TGG + chr5.2:65418172-65418191 MS.gene063598:intron 45.0%
AGGGACAGTAACAGGGCTTA+TGG - chr5.2:65417392-65417411 None:intergenic 50.0%
CCTGGAAAGGGACAGTAACA+GGG - chr5.2:65417399-65417418 None:intergenic 50.0%
CGTTGTAATCTGCAAGGGTC+CGG - chr5.2:65419572-65419591 None:intergenic 50.0%
GGGACAGTAACAGGGCTTAT+GGG - chr5.2:65417391-65417410 None:intergenic 50.0%
GTATGCAACTCGATGGCAAC+CGG + chr5.2:65419550-65419569 MS.gene063598:CDS 50.0%
TCCTGGAAAGGGACAGTAAC+AGG - chr5.2:65417400-65417419 None:intergenic 50.0%
TCGTGGACGTGACAACACAA+AGG - chr5.2:65418129-65418148 None:intergenic 50.0%
!! AGGATATAGGAGGTACCCTG+GGG - chr5.2:65419220-65419239 None:intergenic 50.0%
!! TACTCAGACTCAGAAGCGTC+TGG - chr5.2:65419032-65419051 None:intergenic 50.0%
ACCTTGTCCTCCGCCTTCTT+GGG + chr5.2:65419613-65419632 MS.gene063598:CDS 55.0%
CCCTGTTACTGTCCCTTTCC+AGG + chr5.2:65417396-65417415 MS.gene063598:CDS 55.0%
CTGCAAAGCCCAGACGTATG+TGG + chr5.2:65417544-65417563 MS.gene063598:CDS 55.0%
GCCCAACGTCTGATCTTTGC+TGG + chr5.2:65419528-65419547 MS.gene063598:CDS 55.0%
! CATAACTTGCGCAACCCCCA+GGG + chr5.2:65419202-65419221 MS.gene063598:CDS 55.0%
!! GGATATAGGAGGTACCCTGG+GGG - chr5.2:65419219-65419238 None:intergenic 55.0%
AAGGCGGAGGACAAGGTGGA+GGG - chr5.2:65419610-65419629 None:intergenic 60.0%
ATCAGACGTTGGGCGTGCAC+TGG - chr5.2:65419522-65419541 None:intergenic 60.0%
CAAGAAGGCGGAGGACAAGG+TGG - chr5.2:65419614-65419633 None:intergenic 60.0%
CACCTTGTCCTCCGCCTTCT+TGG + chr5.2:65419612-65419631 MS.gene063598:CDS 60.0%
CCTTGTCCTCCGCCTTCTTG+GGG + chr5.2:65419614-65419633 MS.gene063598:CDS 60.0%
TCAGACGTTGGGCGTGCACT+GGG - chr5.2:65419521-65419540 None:intergenic 60.0%
! GCATAACTTGCGCAACCCCC+AGG + chr5.2:65419201-65419220 MS.gene063598:CDS 60.0%
CCCCAAGAAGGCGGAGGACA+AGG - chr5.2:65419617-65419636 None:intergenic 65.0%
GAAGGCGGAGGACAAGGTGG+AGG - chr5.2:65419611-65419630 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 65417309 65419641 65417309 ID=MS.gene063598
chr5.2 mRNA 65417309 65419641 65417309 ID=MS.gene063598.t1;Parent=MS.gene063598
chr5.2 exon 65417309 65417692 65417309 ID=MS.gene063598.t1.exon1;Parent=MS.gene063598.t1
chr5.2 CDS 65417309 65417692 65417309 ID=cds.MS.gene063598.t1;Parent=MS.gene063598.t1
chr5.2 exon 65417802 65417957 65417802 ID=MS.gene063598.t1.exon2;Parent=MS.gene063598.t1
chr5.2 CDS 65417802 65417957 65417802 ID=cds.MS.gene063598.t1;Parent=MS.gene063598.t1
chr5.2 exon 65418576 65419223 65418576 ID=MS.gene063598.t1.exon3;Parent=MS.gene063598.t1
chr5.2 CDS 65418576 65419223 65418576 ID=cds.MS.gene063598.t1;Parent=MS.gene063598.t1
chr5.2 exon 65419411 65419641 65419411 ID=MS.gene063598.t1.exon4;Parent=MS.gene063598.t1
chr5.2 CDS 65419411 65419641 65419411 ID=cds.MS.gene063598.t1;Parent=MS.gene063598.t1
Gene Sequence

>MS.gene063598

ATGCCATGTCCGAATGCAAAATATGGTTGCAGGGTGAAAAATACGTACCTTAGGCAGACAAATCATGAAGAAGAATGCACCCATAAGCCCTGTTACTGTCCCTTTCCAGGATGTGACTTTGTTGAATCATCAAAAGTGTTGTCTATGCATTTCAGCCATAAACACGGGGATTCTCAAATCAAATCTAAAGTGGAGAAAAATAGGCACATTAAGCTGACGAGAACTCATGTTTTTTCTGCAAAGCCCAGACGTATGTGGCCATATTTTGCTTCATATAAGCTTAGTTACATCCGACAAAGACATTCTTTAAAAAAGGGCACTGCCAAATGTGCCAAAGTACACATCGGTAGCAACGTGATTATGCCTATAATTTCTAGTTTCTCTGTGAGTATTTTGTTTTAATAGCTTGATTTTATTTTGCTAGAACAACGTGATTATGCTTTACTCAAAAACATGATTTTGATTATGTATTTATTTTTTTAAACACTATTAGGCAAAAGATGAAGTGGAGACATGCAACAAAGACTATCTAGAGATCGTTAATTCCGTAAAAGATAGTAAGAACAGCTCCGTTCCTCTTGTGATTTCCAACCCTAATTTGCTTGAGTGCTGCAATTGTTTTCAACCCTTAATGATTCCCGTTTTTCAGGTATGTATTTGTTTTATTTGATTTCATAAGTTATTTTCTATATCTGAGAAGAGTTAATCTGATGTCATATATGCAATATGCTTTTGGTCATTAAATTTGATACCTTTTTCTAGTATATTTCAAGATTGTATTTAATATACACTCCTCCCTTAAGTGCTATGTGAAACTCCTTTGTGTTGTCACGTCCACGAATAGACATTTGGAGGGTGACCTAAGTGACTGATAACGGTGATCTGGTAACAAACGACCCAACAATTTTAAATGCTTTGATGAGCTACCTTAAGCCTTATAGACTTAAGACTTGTTTGCTTTACATTGGGTTCGAATATTAGTAACAATGAACTTTGATAAATAATTATGAATGTCTTGAATATTGTTGTATATCCTTCTATTTTTGAGATTTTATATTTGCATGGTACGAACTTCTTGTATTTTTCCATTAACTTTGATAACTATATTGTCGTAACATTTTTGGTACCAGCTACTGTCAGTCATTGAGTACACAGATTTTAAGAATAATAAACTTAGTATGATTAGCTTTATGTTGGTTATACTTTTGATCACATAACTGGTTAACAAAGTCGATTTGATGGTTTTTTTTTTTGCTGCAAAATACAGTGTGATAATGCTCATATTGTTTGCTCTACTTGCTGTCCTAAACTTTGGAACGAGTGTCACAAGTGCTCGTTGTCCATTAGCTCTAAACGTTGTAAAGCCGTTGAGAATCTATTGCTATCAATTGAAATTCCATGTCCGAATGCAAAATATGGTTGCAGGGTGAAAAATACGTACATGAGGCAGACAAATCATGAAGAAGAATGCATCCATAAGCCCTGTTACTGTCCATTTTCAGGATGTGACTTTGTTGAATCATCAAAAGTGTTGTCTATGCATTTTTGCCATAAACACGGGGATTCTCAAATCAAATTTTCTTATGGTCAATCCTTCATTATCTCCTTGAAGTCTGATGATGAAACCATTGTTCTTCGAGAGGAAAATGATGACAAACTATTTATTCTCAATAATAGTACTATGTTGTTAGGAAATGCTGTCAATATTTGCTGCTTTGGTCCAGACGCTTCTGAGTCTGAGTATAGTTACGATATGTTGGCTACGTCTCAGATATGTAAACTGAAATTACACTCTTTTGCCAAGAATGTCCAACGGGTTACTTTAGCAAATCTTTCACCAGAGTTCCTTGTGATTCCATTTGGTTCTTTCGAACCTCTCAACTTAGAAATTTGCATAACTTGCGCAACCCCCAGGGTACCTCCTATATCCTTTTCTTTGCTTTGTTATTTTCCTATTAAATTGTTATTATCTTCTCTCTATGTATTGAATTTATACCATAGCTTTTGATCTCAAATTCATCACTATTTCAAATGCCAAAAACGTGTTGTTAGTGATTTCTTTTTTTCTATTGTTGATCGTTTTATTGGCAATTGTGGTGCAGATGCAAATCTATGTAAAGGGTCTAGATGGAAAGACAATGGTCCTTGACGTTAAGAGTTCATACAGGATGCCCAAAGTGAAAGAGATGATTTTCGACATGGTTGATATCCCAGTGCACGCCCAACGTCTGATCTTTGCTGGTATGCAACTCGATGGCAACCGGACCCTTGCAGATTACAACGTCAAAAAGGAATCAACCCTCCACCTTGTCCTCCGCCTTCTTGGGGACTAG

Protein sequence

>MS.gene063598.t1

MPCPNAKYGCRVKNTYLRQTNHEEECTHKPCYCPFPGCDFVESSKVLSMHFSHKHGDSQIKSKVEKNRHIKLTRTHVFSAKPRRMWPYFASYKLSYIRQRHSLKKGTAKCAKVHIGSNVIMPIISSFSAKDEVETCNKDYLEIVNSVKDSKNSSVPLVISNPNLLECCNCFQPLMIPVFQCDNAHIVCSTCCPKLWNECHKCSLSISSKRCKAVENLLLSIEIPCPNAKYGCRVKNTYMRQTNHEEECIHKPCYCPFSGCDFVESSKVLSMHFCHKHGDSQIKFSYGQSFIISLKSDDETIVLREENDDKLFILNNSTMLLGNAVNICCFGPDASESEYSYDMLATSQICKLKLHSFAKNVQRVTLANLSPEFLVIPFGSFEPLNLEICITCATPRMQIYVKGLDGKTMVLDVKSSYRMPKVKEMIFDMVDIPVHAQRLIFAGMQLDGNRTLADYNVKKESTLHLVLRLLGD